Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0012554

Physical Location & Seq

Genomic Coordinates Forward (+)

12152410 .. 12155939

Gene Structure 3530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1161600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGTCATGCCTCAGATCAAACACATGGAAAATATCCATTCTTTGTTTTTCCATTTTCCTCTTCGTTCCTTTAATTTCCGGTACTCCTGACCTTTTCGACATCATACGAAGAACAGCGGTAGAGGTAGGCGGCGAGAGAGGGAGCGTAGGGTTTCACGGGGTGGTGGGATGGGACACAGCAGCAAGGAGGTTTCTTGAAGGAAAAGATGGAGAAAACAGGACTGTCATGTTATTGGCTGAGCAGAGGACACGGCGGAGAGACCCTCTCGACGCGTTCAAGAAATACAATGGTGGCTGGAATATCAGCAATAAGCATTACTGGGCTTCTGTTGGTTTCACAGCGGCGCCCTTCTTCGTCACCGCCGTTGTGTGGTTCGTGCTGTTCGGGATAAGCCTGTTGCTCATCTACTTCTGCTACTGCTGCTGTCGGAAAGAGCCGTATGGCTATTCTAGAGTAGCATATGTTCTCTCACTCTCCATCCTCATTTTCTTCACACTCATGGCAATTTTGGGATGTGCTGTGCTCTACACTGGCCAGGACAGGTTCCATGGCAGCACGTGCAGCACGCTTGGATACGTCGTGGGGCAGGCAGATAGGACTGCCGAAAACCTCAGGAACGTGTCAGACTATCTCAATGCAGCTAAGAAGATTGGTATCGACGCCATTGTTCTTCCGGCAGACATTCAGCAGAGCATTGATGGTGTTATGGGAACCATAAAAAATGCTGCCGATATACTCTCTGATACAACCGAAAAGAATTCGAAACGTATAGAAGATGGCTTGGATATCATGAGACTAGCTCTCATTGTTCTTGCTGCTGTTATGCTTTGTTTGGTCTTCGTTGGATTTTGTAATTTGGTGATTCTTGGGTGGATTCTCGTCACAGGAACATTCATTTTGTGTGGTGTATTTCTCCTTGTCCATAATGTGTTTGCAGATGCATGTGTTTCAATGAATGAGTGGGTGCAGAAGAGCCCCACAGCTCATACTGCCTTAGATGATATACTTCCATGTGTGAACAAAAACATGGCCCAGGAGGCCTTGTCGCGGACTAGGGATGCAACCTTCTATGCTGTTTTTGTGCTCAACCGTGTTGTCACCGATATTGCAAATACTAATTCCCCGGCTAATGGTCCCTTGCACTTCAACCAGACCGGCCCACCATTGCCGCTTCTTTGCAACCCCTTTGATGAAAAACGCAACGAGCGAAAGTGTGTCGATGGTGAAATTCAAATGCAAGATGCTCAAGAGGTGTGGAAGAAGTATGTGTGTCAATCTTCGCCAGCGAATGTTTGTATAACTCCTGGTCGGTTAACTCCAAACTACTATGACCAATTGTCCGCCTTCGTCAATGTTAGCTACGCTCTCTATCGTTACAGTCCCTTCTTTCTTGATCTTATAGACTGCACATTTGTTAGGGATGCTTTCTCGGACATAAGTAGAGATCATTGCCCCGCTTTGCGAATACATAGTGCCTGGATGTACATTGGCTTGTTTTTGGTATCTGCAGCTGTAATGTTGTCCTTGATCTTCTGGGTAATCTATGCCCGGGAACGAAGACACCGTGTCTATACCAAAAAGGTTTTGTCTTCTAGGGTTTGGCTAGAACAACCTGCAGAGGTGGGGCTGTCTCAGACTTATTCCAGGTCCTCCTCCACGAGAACTCCCATGCATTCCGGACTCCATGATAGGGCGCATAACATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

569

Amino Acids

63.71

Weight (kDa)

8.43

Isoelectric Point (pI)

42.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012554)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g01910
malus_domestica	MD02G1017200.v1.1 MD15G1161600.v1.1
prunus_persica	Prupe.7G256700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086921
rosa_laevigata	RLG00000015817
rosa_multiflora	Rmu_sc0009060.1_g000007
rosa_roxburghii	Rroxscaffold_2G00154000
rosa_rugosa	Rorug01G0470700 Rorug01G0470700 Rorug01G0470800 Rorug01G0470900 Rorug01G0471000 Rorug01G0471000
rosa_samantha	Rh2AG023500 Rh2BG024200 Rh2CG024400 Rh2DG024300
rosa_wichuraiana	Rw2G001860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1621
AccB1I	GGYRCC	1 cut(s)	343
AccII	CGCG	2 cut(s)	272, 1048
AccIII	TCCGGA	1 cut(s)	1676
AciI	CCGC	9 cut(s)	116, 129, 253, 341, 360, 1048, 1169, 1341, 1455
AcoI	YGGCCR	1 cut(s)	532
AcsI	RAATTY	2 cut(s)	757, 1227
AcvI	CACGTG	1 cut(s)	558
AcyI	GRCGYC	2 cut(s)	344, 660
AdeI	CACNNNGTG	1 cut(s)	160
AfaI	GTAC	2 cut(s)	82, 1484
AfiI	CCNNNNNNNGG	4 cut(s)	369, 1047, 1130, 1690
AflIII	ACRYGT	2 cut(s)	270, 618
AgsI	TTSAA	5 cut(s)	197, 277, 951, 1147, 1232
AhdI	GACNNNNNGTC	2 cut(s)	1336, 1565
AjnI	CCWGG	5 cut(s)	534, 1032, 1303, 1475, 1643
AluBI	AGCT	5 cut(s)	641, 800, 983, 1359, 1511
AluI	AGCT	5 cut(s)	641, 800, 983, 1359, 1511
Alw21I	GWGCWC	2 cut(s)	525, 1086
Alw26I	GTCTC	3 cut(s)	252, 787, 1635
Ama87I	CYCGRG	1 cut(s)	1548
Aor13HI	TCCGGA	1 cut(s)	1676
AoxI	GGCC	4 cut(s)	532, 1029, 1038, 1156
ApeKI	GCWGC	8 cut(s)	179, 420, 552, 561, 638, 725, 815, 1508
ApoI	RAATTY	2 cut(s)	757, 1227
ArsI	GACNNNNNNTTYG	2 cut(s)	1394, 1426
AspLEI	GCGC	2 cut(s)	346, 1696
AspS9I	GGNCC	4 cut(s)	1030, 1133, 1157, 1647
AsuC2I	CCSGG	3 cut(s)	1124, 1549, 1550
AsuHPI	GGTGA	4 cut(s)	349, 871, 1090, 1235
AsuII	TTCGAA	1 cut(s)	761
AvaI	CYCGRG	1 cut(s)	1548
AvaII	GGWCC	2 cut(s)	1133, 1647
AxyI	CCTNAGG	1 cut(s)	611
BalI	TGGCCA	1 cut(s)	534
BanI	GGYRCC	1 cut(s)	343
BanII	GRGCYC	1 cut(s)	977
BauI	CACGAG	1 cut(s)	1657
BbrPI	CACGTG	1 cut(s)	558
BbsI	GAAGAC	3 cut(s)	829, 1564, 1581
Bbv12I	GWGCWC	2 cut(s)	525, 1086
BbvI	GCAGC	8 cut(s)	191, 407, 564, 573, 650, 712, 802, 1520
BccI	CCATC	6 cut(s)	162, 200, 485, 692, 770, 1214
BceAI	ACGGC	3 cut(s)	266, 347, 421
BciT130I	CCWGG	5 cut(s)	536, 1034, 1305, 1477, 1645
BciVI	GTATCC	1 cut(s)	566
BcnI	CCSGG	3 cut(s)	1124, 1549, 1550
BcoDI	GTCTC	3 cut(s)	252, 787, 1635
BfaI	CTAG	5 cut(s)	450, 797, 1053, 1593, 1604
BfmI	CTRYAG	2 cut(s)	1506, 1614
BfoI	RGCGCY	1 cut(s)	347
BfuAI	ACCTGC	1 cut(s)	1621
BfuI	GTATCC	1 cut(s)	566
BglI	GCCNNNNNGGC	1 cut(s)	1037
BlpI	GCTNAGC	1 cut(s)	237
Bme1390I	CCNGG	8 cut(s)	536, 1034, 1124, 1305, 1477, 1549, 1550, 1645
Bme18I	GGWCC	2 cut(s)	1133, 1647
BmeRI	GACNNNNNGTC	2 cut(s)	1336, 1565
BmeT110I	CYCGRG	1 cut(s)	1548
BmgT120I	GGNCC	4 cut(s)	1030, 1133, 1157, 1647
BmiI	GGNNCC	4 cut(s)	345, 545, 712, 1135
BmrFI	CCNGG	8 cut(s)	536, 1034, 1124, 1305, 1477, 1549, 1550, 1645
BmrI	ACTGGG	1 cut(s)	328
BmsI	GCATC	4 cut(s)	928, 1048, 1231, 1411
BmuI	ACTGGG	1 cut(s)	328
BpiI	GAAGAC	3 cut(s)	829, 1564, 1581
BplI	GAGNNNNNCTC	6 cut(s)	247, 279, 249, 281, 784, 816
Bpu1102I	GCTNAGC	1 cut(s)	237
Bpu14I	TTCGAA	1 cut(s)	761
BpuEI	CTTGAG	1 cut(s)	1230
BpuMI	CCSGG	3 cut(s)	1124, 1549, 1550
BsaAI	YACGTR	1 cut(s)	558
BsaBI	GATNNNNATC	1 cut(s)	653
BsaHI	GRCGYC	2 cut(s)	344, 660
BsaI	GGTCTC	1 cut(s)	252
BsaJI	CCNNGG	4 cut(s)	547, 1032, 1122, 1548
BsaWI	WCCGGW	2 cut(s)	77, 1676
BsaXI	ACNNNNNCTCC	4 cut(s)	1028, 1058, 1648, 1678
Bsc4I	CCNNNNNNNGG	4 cut(s)	369, 1047, 1130, 1690
Bse118I	RCCGGY	1 cut(s)	1154
Bse1I	ACTGG	2 cut(s)	323, 535
Bse21I	CCTNAGG	1 cut(s)	611
Bse3DI	GCAATG	2 cut(s)	1163, 1447
Bse8I	GATNNNNATC	1 cut(s)	653
BseAI	TCCGGA	1 cut(s)	1676
BseBI	CCWGG	5 cut(s)	536, 1034, 1305, 1477, 1645
BseDI	CCNNGG	4 cut(s)	547, 1032, 1122, 1548
BseGI	GGATG	6 cut(s)	173, 477, 518, 1063, 1426, 1485
BseJI	GATNNNNATC	1 cut(s)	653
BseLI	CCNNNNNNNGG	4 cut(s)	369, 1047, 1130, 1690
BseMI	GCAATG	2 cut(s)	1163, 1447
BseMII	CTCAG	4 cut(s)	25, 228, 625, 1646
BseNI	ACTGG	2 cut(s)	323, 535
BseRI	GAGGAG	1 cut(s)	1642
BseXI	GCAGC	8 cut(s)	191, 407, 564, 573, 650, 712, 802, 1520
BsgI	GTGCAG	3 cut(s)	580, 986, 1390
Bsh1236I	CGCG	2 cut(s)	272, 1048
BshFI	GGCC	4 cut(s)	534, 1031, 1040, 1158
BshNI	GGYRCC	1 cut(s)	343
BsiHKAI	GWGCWC	2 cut(s)	525, 1086
BsiHKCI	CYCGRG	1 cut(s)	1548
BsiSI	CCGG	6 cut(s)	78, 674, 1124, 1155, 1549, 1677
BslFI	GGGAC	3 cut(s)	185, 1119, 1365
BslI	CCNNNNNNNGG	4 cut(s)	369, 1047, 1130, 1690
BsmAI	GTCTC	3 cut(s)	252, 787, 1635
BsmFI	GGGAC	3 cut(s)	185, 1119, 1365
BsmI	GAATGC	1 cut(s)	1672
BsnI	GGCC	4 cut(s)	534, 1031, 1040, 1158
Bso31I	GGTCTC	1 cut(s)	252
BsoBI	CYCGRG	1 cut(s)	1548
Bsp119I	TTCGAA	1 cut(s)	761
Bsp1286I	GDGCHC	3 cut(s)	525, 977, 1086
Bsp13I	TCCGGA	1 cut(s)	1676
Bsp1407I	TGTACA	1 cut(s)	1482
Bsp143I	GATC	4 cut(s)	14, 1393, 1444, 1527
Bsp1720I	GCTNAGC	1 cut(s)	237
Bsp19I	CCATGG	1 cut(s)	547
BspACI	CCGC	9 cut(s)	116, 129, 253, 341, 360, 1048, 1169, 1341, 1455
BspANI	GGCC	4 cut(s)	534, 1031, 1040, 1158
BspCNI	CTCAG	4 cut(s)	24, 229, 624, 1645
BspEI	TCCGGA	1 cut(s)	1676
BspFNI	CGCG	2 cut(s)	272, 1048
BspHI	TCATGA	1 cut(s)	789
BspLI	GGNNCC	4 cut(s)	345, 545, 712, 1135
BspMAI	CTGCAG	2 cut(s)	1510, 1618
BspMI	ACCTGC	1 cut(s)	1621
BspQI	GCTCTTC	1 cut(s)	965
BspT104I	TTCGAA	1 cut(s)	761
BspT107I	GGYRCC	1 cut(s)	343
BspTNI	GGTCTC	1 cut(s)	252
BsrDI	GCAATG	2 cut(s)	1163, 1447
BsrFI	RCCGGY	1 cut(s)	1154
BsrGI	TGTACA	1 cut(s)	1482
BsrI	ACTGG	2 cut(s)	323, 535
BssAI	RCCGGY	1 cut(s)	1154
BssECI	CCNNGG	4 cut(s)	547, 1032, 1122, 1548
BssMI	GATC	4 cut(s)	14, 1393, 1444, 1527
BssNI	GRCGYC	2 cut(s)	344, 660
BssSI	CACGAG	1 cut(s)	1657
BssT1I	CCWWGG	1 cut(s)	547
Bst2BI	CACGAG	1 cut(s)	1657
Bst2UI	CCWGG	5 cut(s)	536, 1034, 1305, 1477, 1645
Bst4CI	ACNGT	4 cut(s)	223, 1091, 1379, 1565
Bst6I	CTCTTC	2 cut(s)	65, 965
BstACI	GRCGYC	2 cut(s)	344, 660
BstAPI	GCANNNNNTGC	1 cut(s)	558
BstAUI	TGTACA	1 cut(s)	1482
BstBAI	YACGTR	1 cut(s)	558
BstBI	TTCGAA	1 cut(s)	761
BstC8I	GCNNGC	3 cut(s)	566, 588, 1284
BstDEI	CTNAG	6 cut(s)	11, 237, 611, 642, 994, 1632
BstDSI	CCRYGG	1 cut(s)	547
BstF5I	GGATG	6 cut(s)	173, 477, 518, 1063, 1426, 1485
BstFNI	CGCG	2 cut(s)	272, 1048
BstH2I	RGCGCY	1 cut(s)	347
BstHHI	GCGC	2 cut(s)	346, 1696
BstKTI	GATC	4 cut(s)	17, 1396, 1447, 1530
BstMAI	GTCTC	3 cut(s)	252, 787, 1635
BstMBI	GATC	4 cut(s)	14, 1393, 1444, 1527
BstMWI	GCNNNNNNNGC	5 cut(s)	420, 558, 561, 989, 1037
BstNI	CCWGG	5 cut(s)	536, 1034, 1305, 1477, 1645
BstNSI	RCATGY	1 cut(s)	945
BstSCI	CCNGG	8 cut(s)	534, 1032, 1122, 1303, 1475, 1547, 1548, 1643
BstSFI	CTRYAG	2 cut(s)	1506, 1614
BstUI	CGCG	2 cut(s)	272, 1048
BstV1I	GCAGC	8 cut(s)	191, 407, 564, 573, 650, 712, 802, 1520
BstV2I	GAAGAC	3 cut(s)	829, 1564, 1581
Bsu36I	CCTNAGG	1 cut(s)	611
BsuI	GTATCC	1 cut(s)	566
BsuRI	GGCC	4 cut(s)	534, 1031, 1040, 1158
BtgI	CCRYGG	1 cut(s)	547
BtsCI	GGATG	6 cut(s)	173, 477, 518, 1063, 1426, 1485
BtsIMutI	CAGTG	1 cut(s)	528
BveI	ACCTGC	1 cut(s)	1621
Cac8I	GCNNGC	3 cut(s)	566, 588, 1284
CciI	TCATGA	1 cut(s)	789
CfoI	GCGC	2 cut(s)	346, 1696
Cfr10I	RCCGGY	1 cut(s)	1154
Cfr13I	GGNCC	4 cut(s)	1030, 1133, 1157, 1647
Cfr9I	CCCGGG	1 cut(s)	1548
CseI	GACGC	2 cut(s)	278, 668
Csp6I	GTAC	2 cut(s)	81, 1483
CspCI	CAANNNNNGTGG	2 cut(s)	1235, 1270
CviQI	GTAC	2 cut(s)	81, 1483
DdeI	CTNAG	6 cut(s)	11, 237, 611, 642, 994, 1632
DinI	GGCGCC	1 cut(s)	345
DpnI	GATC	4 cut(s)	16, 1395, 1446, 1529
DpnII	GATC	4 cut(s)	14, 1393, 1444, 1527
DraIII	CACNNNGTG	1 cut(s)	160
DriI	GACNNNNNGTC	2 cut(s)	1336, 1565
EaeI	YGGCCR	1 cut(s)	532
Eam1104I	CTCTTC	2 cut(s)	65, 965
Eam1105I	GACNNNNNGTC	2 cut(s)	1336, 1565
EarI	CTCTTC	2 cut(s)	65, 965
EciI	GGCGGA	2 cut(s)	268, 1330
Eco130I	CCWWGG	1 cut(s)	547
Eco147I	AGGCCT	1 cut(s)	1040
Eco24I	GRGCYC	1 cut(s)	977
Eco31I	GGTCTC	1 cut(s)	252
Eco32I	GATATC	1 cut(s)	787
Eco47I	GGWCC	2 cut(s)	1133, 1647
Eco72I	CACGTG	1 cut(s)	558
Eco81I	CCTNAGG	1 cut(s)	611
Eco88I	CYCGRG	1 cut(s)	1548
EcoO109I	RGGNCCY	1 cut(s)	1647
EcoRI	GAATTC	1 cut(s)	757
EcoRII	CCWGG	5 cut(s)	534, 1032, 1303, 1475, 1643
EcoRV	GATATC	1 cut(s)	787
EcoT14I	CCWWGG	1 cut(s)	547
EcoT22I	ATGCAT	2 cut(s)	943, 1674
EcoT38I	GRGCYC	1 cut(s)	977
EgeI	GGCGCC	1 cut(s)	345
EheI	GGCGCC	1 cut(s)	345
ErhI	CCWWGG	1 cut(s)	547
FaqI	GGGAC	3 cut(s)	185, 1119, 1365
FauI	CCCGC	1 cut(s)	1462
FauNDI	CATATG	1 cut(s)	460
FokI	GGATG	6 cut(s)	180, 464, 525, 1070, 1433, 1492
FriOI	GRGCYC	1 cut(s)	977
FspBI	CTAG	5 cut(s)	450, 797, 1053, 1593, 1604
GlaI	GCGC	2 cut(s)	345, 1695
HaeII	RGCGCY	1 cut(s)	347
HaeIII	GGCC	4 cut(s)	534, 1031, 1040, 1158
HapII	CCGG	6 cut(s)	78, 674, 1124, 1155, 1549, 1677
HgaI	GACGC	2 cut(s)	278, 668
HhaI	GCGC	2 cut(s)	346, 1696
Hin1I	GRCGYC	2 cut(s)	344, 660
Hin6I	GCGC	2 cut(s)	344, 1694
HinP1I	GCGC	2 cut(s)	344, 1694
HincII	GTYRAC	1 cut(s)	1314
HindII	GTYRAC	1 cut(s)	1314
HinfI	GANTC	3 cut(s)	862, 874, 1680
HpaI	GTTAAC	1 cut(s)	1314
HpaII	CCGG	6 cut(s)	78, 674, 1124, 1155, 1549, 1677
HphI	GGTGA	4 cut(s)	349, 871, 1090, 1235
Hpy166II	GTNNAC	2 cut(s)	1018, 1314
Hpy188I	TCNGA	6 cut(s)	14, 429, 625, 742, 1432, 1635
Hpy8I	GTNNAC	2 cut(s)	1018, 1314
Hpy99I	CGWCG	3 cut(s)	272, 581, 662
HpyAV	CCTTC	5 cut(s)	191, 358, 1075, 1354, 1393
HpyCH4III	ACNGT	4 cut(s)	223, 1091, 1379, 1565
HpyCH4IV	ACGT	4 cut(s)	557, 576, 618, 766
HpyF10VI	GCNNNNNNNGC	5 cut(s)	420, 558, 561, 989, 1037
HpyF3I	CTNAG	6 cut(s)	11, 237, 611, 642, 994, 1632
HpySE526I	ACGT	4 cut(s)	557, 576, 618, 766
Hsp92I	GRCGYC	2 cut(s)	344, 660
HspAI	GCGC	2 cut(s)	344, 1694
KasI	GGCGCC	1 cut(s)	343
Kpn2I	TCCGGA	1 cut(s)	1676
KspAI	GTTAAC	1 cut(s)	1314
Kzo9I	GATC	4 cut(s)	14, 1393, 1444, 1527
LguI	GCTCTTC	1 cut(s)	965
LmnI	GCTCC	1 cut(s)	141
Lsp1109I	GCAGC	8 cut(s)	191, 407, 564, 573, 650, 712, 802, 1520
LweI	GCATC	4 cut(s)	928, 1048, 1231, 1411
MaeI	CTAG	5 cut(s)	450, 797, 1053, 1593, 1604
MaeII	ACGT	4 cut(s)	557, 576, 618, 766
MaeIII	GTNAC	4 cut(s)	355, 880, 1096, 1373
MalI	GATC	4 cut(s)	16, 1395, 1446, 1529
MboI	GATC	4 cut(s)	14, 1393, 1444, 1527
MfeI	CAATTG	1 cut(s)	1334
MhlI	GDGCHC	3 cut(s)	525, 977, 1086
MlsI	TGGCCA	1 cut(s)	534
MluCI	AATT	7 cut(s)	72, 504, 757, 853, 1117, 1227, 1334
MluI	ACGCGT	1 cut(s)	270
MluNI	TGGCCA	1 cut(s)	534
Mly113I	GGCGCC	1 cut(s)	344
MlyI	GAGTC	1 cut(s)	1674
MmeI	TCCRAC	2 cut(s)	407, 823
Mox20I	TGGCCA	1 cut(s)	534
Mph1103I	ATGCAT	2 cut(s)	943, 1674
MroI	TCCGGA	1 cut(s)	1676
MscI	TGGCCA	1 cut(s)	534
MseI	TTAA	3 cut(s)	71, 1313, 1705
MslI	CAYNNNNRTG	1 cut(s)	497
Msp20I	TGGCCA	1 cut(s)	534
MspA1I	CMGCKG	3 cut(s)	116, 341, 1511
MspI	CCGG	6 cut(s)	78, 674, 1124, 1155, 1549, 1677
MspR9I	CCNGG	8 cut(s)	536, 1034, 1124, 1305, 1477, 1549, 1550, 1645
MunI	CAATTG	1 cut(s)	1334
Mva1269I	GAATGC	1 cut(s)	1672
MvaI	CCWGG	5 cut(s)	536, 1034, 1305, 1477, 1645
MvnI	CGCG	2 cut(s)	272, 1048
MwoI	GCNNNNNNNGC	5 cut(s)	420, 558, 561, 989, 1037
NarI	GGCGCC	1 cut(s)	344
NciI	CCSGG	3 cut(s)	1124, 1549, 1550
NcoI	CCATGG	1 cut(s)	547
NdeI	CATATG	1 cut(s)	460
NdeII	GATC	4 cut(s)	14, 1393, 1444, 1527
NlaIV	GGNNCC	4 cut(s)	345, 545, 712, 1135
NmuCI	GTSAC	3 cut(s)	355, 880, 1096
NsiI	ATGCAT	2 cut(s)	943, 1674
NspI	RCATGY	1 cut(s)	945
NspV	TTCGAA	1 cut(s)	761
PagI	TCATGA	1 cut(s)	789
PceI	AGGCCT	1 cut(s)	1040
PciSI	GCTCTTC	1 cut(s)	965
PcsI	WCGNNNNNNNCGW	3 cut(s)	360, 1204, 1561
PctI	GAATGC	1 cut(s)	1672
PfeI	GAWTC	2 cut(s)	862, 874
PleI	GAGTC	1 cut(s)	1674
PluTI	GGCGCC	1 cut(s)	347
PmaCI	CACGTG	1 cut(s)	558
PmlI	CACGTG	1 cut(s)	558
PpsI	GAGTC	1 cut(s)	1674
Ppu21I	YACGTR	1 cut(s)	558
PpuMI	RGGWCCY	1 cut(s)	1647
Psp5II	RGGWCCY	1 cut(s)	1647
Psp6I	CCWGG	5 cut(s)	534, 1032, 1303, 1475, 1643
PspCI	CACGTG	1 cut(s)	558
PspGI	CCWGG	5 cut(s)	534, 1032, 1303, 1475, 1643
PspN4I	GGNNCC	4 cut(s)	345, 545, 712, 1135
PspPI	GGNCC	4 cut(s)	1030, 1133, 1157, 1647
PspPPI	RGGWCCY	1 cut(s)	1647
PsrI	GAACNNNNNNTAC	2 cut(s)	447, 479
PstI	CTGCAG	2 cut(s)	1510, 1618
PvuII	CAGCTG	1 cut(s)	1511
RsaI	GTAC	2 cut(s)	82, 1484
RsaNI	GTAC	2 cut(s)	81, 1483
RseI	CAYNNNNRTG	1 cut(s)	497
SapI	GCTCTTC	1 cut(s)	965
SaqAI	TTAA	3 cut(s)	71, 1313, 1705
Sau3AI	GATC	4 cut(s)	14, 1393, 1444, 1527
Sau96I	GGNCC	4 cut(s)	1030, 1133, 1157, 1647
SchI	GAGTC	1 cut(s)	1674
ScrFI	CCNGG	8 cut(s)	536, 1034, 1124, 1305, 1477, 1549, 1550, 1645
SduI	GDGCHC	3 cut(s)	525, 977, 1086
SfaNI	GCATC	4 cut(s)	928, 1048, 1231, 1411
SfcI	CTRYAG	2 cut(s)	1506, 1614
SfiI	GGCCNNNNNGGCC	1 cut(s)	1037
SfoI	GGCGCC	1 cut(s)	345
SfuI	TTCGAA	1 cut(s)	761
SinI	GGWCC	2 cut(s)	1133, 1647
SmaI	CCCGGG	1 cut(s)	1550
SmiMI	CAYNNNNRTG	1 cut(s)	497
SmlI	CTYRAG	1 cut(s)	1245
SmoI	CTYRAG	1 cut(s)	1245
Sse9I	AATT	7 cut(s)	72, 504, 757, 853, 1117, 1227, 1334
SseBI	AGGCCT	1 cut(s)	1040
SsiI	CCGC	9 cut(s)	116, 129, 253, 341, 360, 1048, 1169, 1341, 1455
SspDI	GGCGCC	1 cut(s)	343
SspMI	CTAG	5 cut(s)	450, 797, 1053, 1593, 1604
StuI	AGGCCT	1 cut(s)	1040
StyD4I	CCNGG	8 cut(s)	534, 1032, 1122, 1303, 1475, 1547, 1548, 1643
StyI	CCWWGG	1 cut(s)	547
TaaI	ACNGT	4 cut(s)	223, 1091, 1379, 1565
TaiI	ACGT	4 cut(s)	560, 579, 621, 769
TaqI	TCGA	5 cut(s)	96, 267, 657, 761, 1218
TasI	AATT	7 cut(s)	72, 504, 757, 853, 1117, 1227, 1334
TatI	WGTACW	1 cut(s)	1482
TauI	GCSGC	3 cut(s)	132, 344, 1171
TfiI	GAWTC	2 cut(s)	862, 874
Tru1I	TTAA	3 cut(s)	71, 1313, 1705
Tru9I	TTAA	3 cut(s)	71, 1313, 1705
TscAI	CASTG	1 cut(s)	535
TseFI	GTSAC	3 cut(s)	355, 880, 1096
TseI	GCWGC	8 cut(s)	179, 420, 552, 561, 638, 725, 815, 1508
Tsp45I	GTSAC	3 cut(s)	355, 880, 1096
TspDTI	ATGAA	3 cut(s)	883, 968, 1206
TspMI	CCCGGG	1 cut(s)	1548
TspRI	CASTG	1 cut(s)	535
VpaK11BI	GGWCC	2 cut(s)	1133, 1647
XapI	RAATTY	2 cut(s)	757, 1227
XbaI	TCTAGA	1 cut(s)	449
XceI	RCATGY	1 cut(s)	945
XmaI	CCCGGG	1 cut(s)	1548
XspI	CTAG	5 cut(s)	450, 797, 1053, 1593, 1604
Zsp2I	ATGCAT	2 cut(s)	943, 1674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.