Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0005004

Physical Location & Seq

Genomic Coordinates Reverse (-)

20819181 .. 20821361

Gene Structure 2181 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1249600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGATTATCTTCTGCAGTCCTTGCAACCCTTACAATCCATGACACCACTCTTGCTCATAATCCCACTCCTATTTCTCCTCCCTCTAATTTTCCGTTTCCGGCGACCACCACCATACCCGCCCGGCCCCAAAGGCCTACCCCTTATTGGCAACATGTTATTGATGGACCAACTAACTCACCGGGGCCTCGCCAAGCTGGCCAAGAAATACGGCGGCATATTCCACCTCCGCATGGGGTTTTTACACATGGTTGCGATTTCCAACCCTGACGTGGCACGACAAGTCCTTCAAGTCCAAGACAACATCTTCTCCAACCGCCCGGCCACCATCGCCATCAGCTACCTCACCTACGACCGCGCTGACATGGCCTTCGCGCACTACGGGCCCTTCTGGCGCCAGATGCGTAAGCTCTGCGTCATGAAGCTCTTTAGTCGCAAACGCGCCGAGTCCTGGGAGTCTGTCAGGGATGAAGTGGACTCATCGGTTAGGACCGTCACAGTTCATGTTGGTTCGGCTGTAAACATCGGAGAGTTGGTTTTTTCGCTCACGAAAAATATTATTTATCGGGCGGCGTTCGGGACGAGCTCTCAGGAAGGGCAGGATGAGTTTATTGGGATACTGCAGGAATTTTCCAAATTGTTTGGAGCTTTTAATATTGCTGATTTTATTCCTAGCCTGGGGTGGGTTGATCCTCAGGGGCTAAACAATAGACTCGCTAAGGCTCGTGAGTCCTTGGATCGGTTCATTGACACCATCATAGATGATCACATGGAGAAGAAAAGGAATGGTAAGGGAGTGAGTGACGGTGAAACGGACATGGTGGATGAGTTGTTGGCTTTTTACAGTGAAGAAGCTAAAGTATATGAATCTGAAGATAATTTGCAAAACGCCATCAAACTTACTAGGGATAACATCAAGGCCATCATCATGGACGTAATGTTTGGCGGGACGGAGACTGTGGCGTCGGCAATAGAGTGGGCCATGTCGGAGCTGATGAAGAGCCCGGAGGACCTAAAGAGGGTCCAACAAGAACTTGCTGACGTGGTGGGTCTAGACCGTCGACCTGAAGAGACCGACTTCGAGAAGTTGACATACCTAAAATGTGCCCTAAAAGAGACACTACGACTCCACCCACCAATTCCACTACTCCTCCACGAGACCTCGGAGGACGCTGTAGTAGCCGGCTACCGCATTCCCAAAAGATCGCGTGTGATGATCAACGCGTGGGCCATTGGACGTGACAAGGACTCGTGGGAGGACGCCGAGTCCTTCAAGCCCTCGAGGTTTTTGAAAGAAGGTGTGCCTGACTTTAAGGGGAGTAACTTCGAGTTCATTCCGTTCGGGTCCGGTCGGAGGTCGTGCCCGGGCATGCAACTAGGGTTGTACGCGCTGGAGATGGCGGTGGCACACTTGCTTCATTGTTTTACGTGGGAGTTGCCTGATGGTATGAAACCTAGTGAGCTCGACATGAACGACGTGTTTGGACTCACCGCTCCGAGAGCGAGTCGACTCATCGCCGTACCGAGTAAAAGGGTGGTTTGTCCACTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010224 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019438 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

517

Amino Acids

58.35

Weight (kDa)

6.26

Isoelectric Point (pI)

45.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	40 - 499	1.3e-101	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36220
fragaria_vesca	FvH4_1g12210
malus_domestica	MD02G1136000.v1.1 MD15G1249600.v1.1
prunus_persica	Prupe.7G164600_v2.0.a1
pyrus_communis	pycom02g10730 pycom15g22000
rosa_chinensis	RchiOBHm_Chr2g0099701 RchiOBHm_Chr2g0099981
rosa_laevigata	RLG00000016909 RLG00000016927
rosa_multiflora	Rmu_co8406061.1_g000001 Rmu_sc0006209.1_g000001 Rmu_sc0008864.1_g000016 Rmu_sc0008864.1_g000017 Rmu_sc0013563.1_g000007
rosa_roxburghii	Rroxscaffold_2G00142680 Rroxscaffold_2G00142820
rosa_rugosa	Rorug02G0082600 Rorug02G0084600
rosa_samantha	Rh2AG133600 Rh2BG135100 Rh2BG137100 Rh2CG136100 Rh2CG138600 Rh2DG136500 Rh2DG139000
rosa_wichuraiana	Rw2G010230 Rw2G010390 Rw2G010410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	961
AbsI	CCTCGAGG	1 cut(s)	1279
AccB1I	GGYRCC	1 cut(s)	393
AccBSI	CCGCTC	1 cut(s)	1493
AccI	GTMKAC	2 cut(s)	1060, 1507
AccII	CGCG	6 cut(s)	357, 374, 441, 1207, 1223, 1388
AclWI	GGATC	2 cut(s)	683, 744
AcoI	YGGCCR	2 cut(s)	198, 321
AcsI	RAATTY	1 cut(s)	626
AcuI	CTGAAG	2 cut(s)	891, 1086
AcyI	GRCGYC	3 cut(s)	394, 962, 1260
AfaI	GTAC	2 cut(s)	1385, 1521
AfiI	CCNNNNNNNGG	9 cut(s)	146, 232, 271, 450, 677, 682, 738, 1018, 1353
AflIII	ACRYGT	3 cut(s)	153, 1221, 1476
AgsI	TTSAA	3 cut(s)	290, 1273, 1291
AhdI	GACNNNNNGTC	1 cut(s)	1264
AjiI	CACGTC	4 cut(s)	271, 1042, 1238, 1477
AjnI	CCWGG	2 cut(s)	449, 675
AluBI	AGCT	9 cut(s)	196, 339, 409, 424, 585, 647, 854, 991, 1462
AluI	AGCT	9 cut(s)	196, 339, 409, 424, 585, 647, 854, 991, 1462
Alw21I	GWGCWC	2 cut(s)	587, 1464
Alw26I	GTCTC	4 cut(s)	947, 1064, 1109, 1151
AlwI	GGATC	2 cut(s)	683, 744
Ama87I	CYCGRG	2 cut(s)	1279, 1363
ApaI	GGGCCC	1 cut(s)	387
ApoI	RAATTY	1 cut(s)	626
ArsI	GACNNNNNNTTYG	4 cut(s)	353, 385, 923, 955
AspLEI	GCGC	5 cut(s)	359, 376, 396, 443, 1390
AsuC2I	CCSGG	6 cut(s)	123, 182, 320, 1004, 1364, 1365
AsuHPI	GGTGA	4 cut(s)	170, 337, 818, 1480
AvaI	CYCGRG	2 cut(s)	1279, 1363
AvaII	GGWCC	5 cut(s)	166, 489, 1009, 1021, 1344
AxyI	CCTNAGG	1 cut(s)	693
BaeGI	GKGCMC	3 cut(s)	387, 1108, 1364
BalI	TGGCCA	1 cut(s)	200
BanI	GGYRCC	1 cut(s)	393
BanII	GRGCYC	4 cut(s)	387, 587, 1004, 1464
BarI	GAAGNNNNNNTAC	2 cut(s)	1076, 1108
BauI	CACGAG	3 cut(s)	723, 1154, 1249
Bbv12I	GWGCWC	2 cut(s)	587, 1464
BccI	CCATC	8 cut(s)	157, 335, 341, 761, 899, 929, 1390, 1436
BceAI	ACGGC	2 cut(s)	226, 1502
BciT130I	CCWGG	2 cut(s)	451, 677
BciVI	GTATCC	1 cut(s)	609
BclI	TGATCA	2 cut(s)	763, 1215
BcnI	CCSGG	6 cut(s)	123, 182, 320, 1004, 1364, 1365
BcoDI	GTCTC	4 cut(s)	947, 1064, 1109, 1151
BfaI	CTAG	5 cut(s)	672, 903, 1052, 1376, 1455
BfmI	CTRYAG	3 cut(s)	14, 620, 1173
BfoI	RGCGCY	1 cut(s)	397
BfuI	GTATCC	1 cut(s)	609
BglI	GCCNNNNNGGC	3 cut(s)	132, 197, 391
BisI	GCNGC	2 cut(s)	214, 570
BlsI	GCNGC	2 cut(s)	215, 571
Bme1390I	CCNGG	8 cut(s)	123, 182, 320, 451, 677, 1004, 1364, 1365
Bme18I	GGWCC	5 cut(s)	166, 489, 1009, 1021, 1344
BmeRI	GACNNNNNGTC	1 cut(s)	1264
BmeT110I	CYCGRG	2 cut(s)	1279, 1363
BmgBI	CACGTC	4 cut(s)	271, 1042, 1238, 1477
BmiI	GGNNCC	6 cut(s)	127, 185, 385, 395, 1022, 1345
BmrFI	CCNGG	8 cut(s)	123, 182, 320, 451, 677, 1004, 1364, 1365
BmsI	GCATC	1 cut(s)	390
BpmI	CTGGAG	1 cut(s)	1412
Bpu10I	CCTNAGC	1 cut(s)	717
BpuMI	CCSGG	6 cut(s)	123, 182, 320, 1004, 1364, 1365
BsaAI	YACGTR	1 cut(s)	1428
BsaHI	GRCGYC	3 cut(s)	394, 962, 1260
BsaI	GGTCTC	2 cut(s)	1064, 1151
BsaJI	CCNNGG	6 cut(s)	181, 450, 676, 732, 1161, 1363
BsaWI	WCCGGW	1 cut(s)	1346
BsaXI	ACNNNNNCTCC	8 cut(s)	293, 323, 519, 549, 1110, 1134, 1140, 1164
Bsc4I	CCNNNNNNNGG	9 cut(s)	146, 232, 271, 450, 677, 682, 738, 1018, 1353
Bse118I	RCCGGY	1 cut(s)	1181
Bse21I	CCTNAGG	1 cut(s)	693
BseBI	CCWGG	2 cut(s)	451, 677
BseDI	CCNNGG	6 cut(s)	181, 450, 676, 732, 1161, 1363
BseGI	GGATG	3 cut(s)	472, 607, 829
BseLI	CCNNNNNNNGG	9 cut(s)	146, 232, 271, 450, 677, 682, 738, 1018, 1353
BseMII	CTCAG	2 cut(s)	602, 707
BseRI	GAGGAG	2 cut(s)	68, 1139
BseSI	GKGCMC	3 cut(s)	387, 1108, 1364
Bsh1236I	CGCG	6 cut(s)	357, 374, 441, 1207, 1223, 1388
Bsh1285I	CGRYCG	2 cut(s)	355, 1351
BshNI	GGYRCC	1 cut(s)	393
BsiEI	CGRYCG	2 cut(s)	355, 1351
BsiHKAI	GWGCWC	2 cut(s)	587, 1464
BsiHKCI	CYCGRG	2 cut(s)	1279, 1363
BsiSI	CCGG	8 cut(s)	100, 123, 181, 320, 1004, 1182, 1347, 1364
BslFI	GGGAC	2 cut(s)	592, 961
BslI	CCNNNNNNNGG	9 cut(s)	146, 232, 271, 450, 677, 682, 738, 1018, 1353
BsmAI	GTCTC	4 cut(s)	947, 1064, 1109, 1151
BsmFI	GGGAC	2 cut(s)	592, 961
BsmI	GAATGC	1 cut(s)	1191
Bso31I	GGTCTC	2 cut(s)	1064, 1151
BsoBI	CYCGRG	2 cut(s)	1279, 1363
Bsp120I	GGGCCC	1 cut(s)	383
Bsp1286I	GDGCHC	6 cut(s)	387, 587, 1004, 1108, 1364, 1464
Bsp143I	GATC	5 cut(s)	688, 736, 763, 1202, 1215
BspCNI	CTCAG	2 cut(s)	601, 706
BspFNI	CGCG	6 cut(s)	357, 374, 441, 1207, 1223, 1388
BspHI	TCATGA	1 cut(s)	417
BspLI	GGNNCC	6 cut(s)	127, 185, 385, 395, 1022, 1345
BspMAI	CTGCAG	2 cut(s)	18, 624
BspPI	GGATC	2 cut(s)	683, 744
BspQI	GCTCTTC	1 cut(s)	992
BspT107I	GGYRCC	1 cut(s)	393
BspTNI	GGTCTC	2 cut(s)	1064, 1151
BsrBI	CCGCTC	1 cut(s)	1493
BsrFI	RCCGGY	1 cut(s)	1181
BssAI	RCCGGY	1 cut(s)	1181
BssECI	CCNNGG	6 cut(s)	181, 450, 676, 732, 1161, 1363
BssMI	GATC	5 cut(s)	688, 736, 763, 1202, 1215
BssNI	GRCGYC	3 cut(s)	394, 962, 1260
BssSI	CACGAG	3 cut(s)	723, 1154, 1249
BssT1I	CCWWGG	1 cut(s)	732
Bst2BI	CACGAG	3 cut(s)	723, 1154, 1249
Bst2UI	CCWGG	2 cut(s)	451, 677
Bst4CI	ACNGT	6 cut(s)	493, 499, 806, 845, 958, 1058
Bst6I	CTCTTC	2 cut(s)	992, 1062
BstACI	GRCGYC	3 cut(s)	394, 962, 1260
BstAPI	GCANNNNNTGC	1 cut(s)	22
BstBAI	YACGTR	1 cut(s)	1428
BstC8I	GCNNGC	3 cut(s)	198, 1183, 1370
BstDEI	CTNAG	3 cut(s)	588, 693, 717
BstF5I	GGATG	3 cut(s)	472, 607, 829
BstFNI	CGCG	6 cut(s)	357, 374, 441, 1207, 1223, 1388
BstH2I	RGCGCY	1 cut(s)	397
BstHHI	GCGC	5 cut(s)	359, 376, 396, 443, 1390
BstKTI	GATC	5 cut(s)	691, 739, 766, 1205, 1218
BstMAI	GTCTC	4 cut(s)	947, 1064, 1109, 1151
BstMBI	GATC	5 cut(s)	688, 736, 763, 1202, 1215
BstMCI	CGRYCG	2 cut(s)	355, 1351
BstNI	CCWGG	2 cut(s)	451, 677
BstNSI	RCATGY	2 cut(s)	157, 1372
BstSCI	CCNGG	8 cut(s)	121, 180, 318, 449, 675, 1002, 1362, 1363
BstSFI	CTRYAG	3 cut(s)	14, 620, 1173
BstSLI	GKGCMC	3 cut(s)	387, 1108, 1364
BstUI	CGCG	6 cut(s)	357, 374, 441, 1207, 1223, 1388
BstXI	CCANNNNNNTGG	1 cut(s)	928
Bsu36I	CCTNAGG	1 cut(s)	693
BsuI	GTATCC	1 cut(s)	609
BtgZI	GCGATG	2 cut(s)	313, 1498
BtrI	CACGTC	4 cut(s)	271, 1042, 1238, 1477
BtsCI	GGATG	3 cut(s)	472, 607, 829
BtsIMutI	CAGTG	1 cut(s)	850
Cac8I	GCNNGC	3 cut(s)	198, 1183, 1370
CciI	TCATGA	1 cut(s)	417
CfoI	GCGC	5 cut(s)	359, 376, 396, 443, 1390
Cfr10I	RCCGGY	1 cut(s)	1181
Cfr9I	CCCGGG	1 cut(s)	1363
CseI	GACGC	4 cut(s)	403, 951, 1178, 1268
Csp6I	GTAC	2 cut(s)	1384, 1520
CviQI	GTAC	2 cut(s)	1384, 1520
DdeI	CTNAG	3 cut(s)	588, 693, 717
DinI	GGCGCC	1 cut(s)	395
DpnI	GATC	5 cut(s)	690, 738, 765, 1204, 1217
DpnII	GATC	5 cut(s)	688, 736, 763, 1202, 1215
DrdI	GACNNNNNNGTC	1 cut(s)	961
DriI	GACNNNNNGTC	1 cut(s)	1264
DseDI	GACNNNNNNGTC	1 cut(s)	961
EaeI	YGGCCR	2 cut(s)	198, 321
Eam1104I	CTCTTC	2 cut(s)	992, 1062
Eam1105I	GACNNNNNGTC	1 cut(s)	1264
EarI	CTCTTC	2 cut(s)	992, 1062
Ecl136II	GAGCTC	2 cut(s)	585, 1462
Eco130I	CCWWGG	1 cut(s)	732
Eco147I	AGGCCT	1 cut(s)	135
Eco24I	GRGCYC	4 cut(s)	387, 587, 1004, 1464
Eco31I	GGTCTC	2 cut(s)	1064, 1151
Eco47I	GGWCC	5 cut(s)	166, 489, 1009, 1021, 1344
Eco53kI	GAGCTC	2 cut(s)	585, 1462
Eco57I	CTGAAG	2 cut(s)	891, 1086
Eco81I	CCTNAGG	1 cut(s)	693
Eco88I	CYCGRG	2 cut(s)	1279, 1363
EcoICRI	GAGCTC	2 cut(s)	585, 1462
EcoO109I	RGGNCCY	3 cut(s)	184, 384, 1009
EcoRII	CCWGG	2 cut(s)	449, 675
EcoT14I	CCWWGG	1 cut(s)	732
EcoT38I	GRGCYC	4 cut(s)	387, 587, 1004, 1464
EgeI	GGCGCC	1 cut(s)	395
EheI	GGCGCC	1 cut(s)	395
ErhI	CCWWGG	1 cut(s)	732
FaqI	GGGAC	2 cut(s)	592, 961
FauI	CCCGC	2 cut(s)	126, 938
FbaI	TGATCA	2 cut(s)	763, 1215
FblI	GTMKAC	2 cut(s)	1060, 1507
Fnu4HI	GCNGC	2 cut(s)	214, 570
FokI	GGATG	3 cut(s)	479, 614, 836
FriOI	GRGCYC	4 cut(s)	387, 587, 1004, 1464
Fsp4HI	GCNGC	2 cut(s)	214, 570
FspBI	CTAG	5 cut(s)	672, 903, 1052, 1376, 1455
GlaI	GCGC	5 cut(s)	358, 375, 395, 442, 1389
GluI	GCNGC	2 cut(s)	214, 570
GsuI	CTGGAG	1 cut(s)	1412
HaeII	RGCGCY	1 cut(s)	397
HapII	CCGG	8 cut(s)	100, 123, 181, 320, 1004, 1182, 1347, 1364
HgaI	GACGC	4 cut(s)	403, 951, 1178, 1268
HhaI	GCGC	5 cut(s)	359, 376, 396, 443, 1390
Hin1I	GRCGYC	3 cut(s)	394, 962, 1260
Hin6I	GCGC	5 cut(s)	357, 374, 394, 441, 1388
HinP1I	GCGC	5 cut(s)	357, 374, 394, 441, 1388
HincII	GTYRAC	3 cut(s)	1061, 1089, 1508
HindII	GTYRAC	3 cut(s)	1061, 1089, 1508
HpaII	CCGG	8 cut(s)	100, 123, 181, 320, 1004, 1182, 1347, 1364
HphI	GGTGA	4 cut(s)	170, 337, 818, 1480
Hpy166II	GTNNAC	6 cut(s)	475, 520, 1061, 1089, 1508, 1544
Hpy188I	TCNGA	7 cut(s)	527, 871, 988, 1165, 1353, 1497, 1550
Hpy188III	TCNNGA	7 cut(s)	418, 547, 577, 590, 725, 1052, 1081
Hpy8I	GTNNAC	6 cut(s)	475, 520, 1061, 1089, 1508, 1544
Hpy99I	CGWCG	3 cut(s)	967, 1062, 1478
HpyAV	CCTTC	6 cut(s)	296, 379, 397, 587, 1279, 1289
HpyCH4III	ACNGT	6 cut(s)	493, 499, 806, 845, 958, 1058
HpyCH4IV	ACGT	6 cut(s)	270, 933, 1041, 1237, 1427, 1476
HpyCH4V	TGCA	5 cut(s)	16, 25, 622, 883, 1372
HpyF3I	CTNAG	3 cut(s)	588, 693, 717
HpySE526I	ACGT	6 cut(s)	270, 933, 1041, 1237, 1427, 1476
Hsp92I	GRCGYC	3 cut(s)	394, 962, 1260
HspAI	GCGC	5 cut(s)	357, 374, 394, 441, 1388
KasI	GGCGCC	1 cut(s)	393
KroI	GCCGGC	1 cut(s)	1181
KroNI	GCCGGC	1 cut(s)	1183
Ksp22I	TGATCA	2 cut(s)	763, 1215
Kzo9I	GATC	5 cut(s)	688, 736, 763, 1202, 1215
LguI	GCTCTTC	1 cut(s)	992
LmnI	GCTCC	3 cut(s)	644, 988, 1498
LweI	GCATC	1 cut(s)	390
MaeI	CTAG	5 cut(s)	672, 903, 1052, 1376, 1455
MaeII	ACGT	6 cut(s)	270, 933, 1041, 1237, 1427, 1476
MaeIII	GTNAC	4 cut(s)	493, 800, 1238, 1319
MalI	GATC	5 cut(s)	690, 738, 765, 1204, 1217
MbiI	CCGCTC	1 cut(s)	1493
MboI	GATC	5 cut(s)	688, 736, 763, 1202, 1215
MboII	GAAGA	6 cut(s)	298, 787, 860, 884, 1009, 1079
MhlI	GDGCHC	6 cut(s)	387, 587, 1004, 1108, 1364, 1464
MlsI	TGGCCA	1 cut(s)	200
MluCI	AATT	5 cut(s)	87, 626, 635, 877, 1137
MluI	ACGCGT	1 cut(s)	1221
MluNI	TGGCCA	1 cut(s)	200
Mly113I	GGCGCC	1 cut(s)	394
MmeI	TCCRAC	5 cut(s)	285, 336, 966, 1048, 1331
Mox20I	TGGCCA	1 cut(s)	200
MroNI	GCCGGC	1 cut(s)	1181
MscI	TGGCCA	1 cut(s)	200
MseI	TTAA	2 cut(s)	651, 1311
MslI	CAYNNNNRTG	1 cut(s)	926
Msp20I	TGGCCA	1 cut(s)	200
MspI	CCGG	8 cut(s)	100, 123, 181, 320, 1004, 1182, 1347, 1364
MspR9I	CCNGG	8 cut(s)	123, 182, 320, 451, 677, 1004, 1364, 1365
Mva1269I	GAATGC	1 cut(s)	1191
MvaI	CCWGG	2 cut(s)	451, 677
MvnI	CGCG	6 cut(s)	357, 374, 441, 1207, 1223, 1388
NaeI	GCCGGC	1 cut(s)	1183
NarI	GGCGCC	1 cut(s)	394
NciI	CCSGG	6 cut(s)	123, 182, 320, 1004, 1364, 1365
NdeII	GATC	5 cut(s)	688, 736, 763, 1202, 1215
NgoMIV	GCCGGC	1 cut(s)	1181
NlaIV	GGNNCC	6 cut(s)	127, 185, 385, 395, 1022, 1345
NmeAIII	GCCGAG	2 cut(s)	469, 1288
NmuCI	GTSAC	3 cut(s)	493, 800, 1238
NspI	RCATGY	2 cut(s)	157, 1372
PaeI	GCATGC	1 cut(s)	1372
PaeR7I	CTCGAG	1 cut(s)	1279
PagI	TCATGA	1 cut(s)	417
PceI	AGGCCT	1 cut(s)	135
PciI	ACATGT	1 cut(s)	153
PciSI	GCTCTTC	1 cut(s)	992
PcsI	WCGNNNNNNNCGW	1 cut(s)	1470
PctI	GAATGC	1 cut(s)	1191
PdiI	GCCGGC	1 cut(s)	1183
PfeI	GAWTC	1 cut(s)	866
PkrI	GCNGC	2 cut(s)	215, 571
PluTI	GGCGCC	1 cut(s)	397
Ppu21I	YACGTR	1 cut(s)	1428
PpuMI	RGGWCCY	1 cut(s)	1009
PscI	ACATGT	1 cut(s)	153
Psp124BI	GAGCTC	2 cut(s)	587, 1464
Psp5II	RGGWCCY	1 cut(s)	1009
Psp6I	CCWGG	2 cut(s)	449, 675
PspGI	CCWGG	2 cut(s)	449, 675
PspN4I	GGNNCC	6 cut(s)	127, 185, 385, 395, 1022, 1345
PspOMI	GGGCCC	1 cut(s)	383
PspPPI	RGGWCCY	1 cut(s)	1009
PspXI	VCTCGAGB	1 cut(s)	1279
PstI	CTGCAG	2 cut(s)	18, 624
RsaI	GTAC	2 cut(s)	1385, 1521
RsaNI	GTAC	2 cut(s)	1384, 1520
RseI	CAYNNNNRTG	1 cut(s)	926
SacI	GAGCTC	2 cut(s)	587, 1464
SalI	GTCGAC	2 cut(s)	1059, 1506
SapI	GCTCTTC	1 cut(s)	992
SaqAI	TTAA	2 cut(s)	651, 1311
SatI	GCNGC	2 cut(s)	214, 570
Sau3AI	GATC	5 cut(s)	688, 736, 763, 1202, 1215
ScrFI	CCNGG	8 cut(s)	123, 182, 320, 451, 677, 1004, 1364, 1365
SduI	GDGCHC	6 cut(s)	387, 587, 1004, 1108, 1364, 1464
SfaNI	GCATC	1 cut(s)	390
SfcI	CTRYAG	3 cut(s)	14, 620, 1173
SfiI	GGCCNNNNNGGCC	1 cut(s)	132
SfoI	GGCGCC	1 cut(s)	395
Sfr274I	CTCGAG	1 cut(s)	1279
SinI	GGWCC	5 cut(s)	166, 489, 1009, 1021, 1344
SlaI	CTCGAG	1 cut(s)	1279
SmaI	CCCGGG	1 cut(s)	1365
SmiMI	CAYNNNNRTG	1 cut(s)	926
SmlI	CTYRAG	1 cut(s)	1279
SmoI	CTYRAG	1 cut(s)	1279
SphI	GCATGC	1 cut(s)	1372
SrfI	GCCCGGGC	1 cut(s)	1365
Sse9I	AATT	5 cut(s)	87, 626, 635, 877, 1137
SseBI	AGGCCT	1 cut(s)	135
SspDI	GGCGCC	1 cut(s)	393
SspI	AATATT	2 cut(s)	556, 655
SspMI	CTAG	5 cut(s)	672, 903, 1052, 1376, 1455
SstI	GAGCTC	2 cut(s)	587, 1464
StuI	AGGCCT	1 cut(s)	135
StyD4I	CCNGG	8 cut(s)	121, 180, 318, 449, 675, 1002, 1362, 1363
StyI	CCWWGG	1 cut(s)	732
TaaI	ACNGT	6 cut(s)	493, 499, 806, 845, 958, 1058
TaiI	ACGT	6 cut(s)	273, 936, 1044, 1240, 1430, 1479
TaqI	TCGA	6 cut(s)	1060, 1080, 1280, 1326, 1464, 1507
TaqII	GACCGA	1 cut(s)	1088
TasI	AATT	5 cut(s)	87, 626, 635, 877, 1137
TauI	GCSGC	2 cut(s)	216, 572
TfiI	GAWTC	1 cut(s)	866
Tru1I	TTAA	2 cut(s)	651, 1311
Tru9I	TTAA	2 cut(s)	651, 1311
TscAI	CASTG	1 cut(s)	850
TseFI	GTSAC	3 cut(s)	493, 800, 1238
Tsp45I	GTSAC	3 cut(s)	493, 800, 1238
TspGWI	ACGGA	4 cut(s)	83, 827, 965, 1326
TspMI	CCCGGG	1 cut(s)	1363
TspRI	CASTG	1 cut(s)	850
VpaK11BI	GGWCC	5 cut(s)	166, 489, 1009, 1021, 1344
XapI	RAATTY	1 cut(s)	626
XbaI	TCTAGA	1 cut(s)	1051
XceI	RCATGY	2 cut(s)	157, 1372
XcmI	CCANNNNNNNNNTGG	1 cut(s)	268
XhoI	CTCGAG	1 cut(s)	1279
XmaI	CCCGGG	1 cut(s)	1363
XmiI	GTMKAC	2 cut(s)	1060, 1507
XspI	CTAG	5 cut(s)	672, 903, 1052, 1376, 1455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.