Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005004

Physical Location & Seq

Genomic Coordinates Reverse (-)

6795556 .. 6799431

Gene Structure 3876 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0084600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGGTGTCGTACGTGAGTGCGTTTCTGTACGGCGTCGGAGGCCTTGTCTTCGCCGGCATGGCGCTACTGGTGGCGCTGCAGGAGCGACTGGTCTACGTGCCGGTCTTACCGGGCCTCACCAAGTCCTACCCTATAACCCCAGCCCGTCTCCGACTCACTTACGAGGACGTTTGGCTCCGATCCCCGGACGGCGTTCGCCTCCACGCCTGGTTCATCAAGCTCTTCCCCGACTGCCGAGGTCCAACGCTTTTGTTTTTCCAAGAGAATGCTGGAAATATTGCGCATCGTCTTGAAATGGTCCGCATAATGTTGCAAAAGTTGCAGTGCAACGTGTTTATGCTCTCATATCGAGGTTATGGAGCAAGTGAGGGATTTCCTTCTCAACATGGAATTACTAAAGATGCTCAGGCTGCGTTGGATCATCTTTCTCAGAGGACTGACATTGACACATCTAGAATACTTGTCTTTGGAAGGTCGCTTGGGGGTGCAGTTGGATCTGTGGTTGCTAAAAACAACCCCGATAAGGTTGCTGCACTGATTGTTGAAAACACCTTCACATCCATTTTGGACATGGCTGGAGTTTTGCTGCCCTTCCTGAAGTATTTTATCGGAGGCAGTGCTTTCAAAGGTCCTAAAATCCTTAATTTCCTCGTACGTTCTCCTTGGAGTACAATCGATGTCATTGGTGAGGTTAAGCGGCCGATCCTATTTCTCTCTGGTTTGCAAGATGAGATGATTCCCCCGATCCACATGCAAATGCTGTATGCTAAAGCAGCTGCTCATAATAGGCAATGTGTTTTTGTGGAATTTCCTGACGGTATGCATATGGATACTTGGCTCTCTGGTGGTGATCATTATTGGAGAACAATCAAAGAGTTTCTTAAAAAGCATGTTCCAGAGGGACAAGATGATGAATCATCAAAGAATGATACCGTTATTGTGGTGCTCTTGGACAATGCTATAAAATGCAATGAGATTATGTGCTTGTTTAGCCTACATTTAGCTTGTTTTGTAACATCTTATCAAGCTCGAGATCCTTCAGATTTCTTCTTGCACTTGTCTAATCAAGTACTTATCTCTGTGCCTACGCTGGAATTGTATTCTTGTTCCTCTCGCAGCTCCCTTCAACCAGAAAAGGAAAAGCCCCAATTGACCGCTGGAGACAAAAGTAGAGCGGGTATAAGCCTAAACAGCAAGTTGTCACGGGTCTCGAAATTATGTGTGTTTAGTGATGGCATATTAGTCAATTTCAAAAATTATGAGCTCCAACTAAACTCGATATATAAAAGCGATGAATCCAGTGCCACTTCGATTTTCAAAGTCCATTTCAACATGGCAATAGGCTCACGGCGCCCCGCCGCTGACCACCCCGGAGCACCACCGTGGAGGCGGAGAAGCCAGCTCCGCCCCAAGACGAGTGGTTCCAAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010224 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019438 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

477

Amino Acids

53.16

Weight (kDa)

9.1

Isoelectric Point (pI)

42.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	104 - 203	3.7e-08	Serine aminopeptidase, S33
Abhydrolase_1	PF00561	104 - 196	2.5e-07	alpha/beta hydrolase fold
Peptidase_S9	PF00326	132 - 297	7.5e-11	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36220
fragaria_vesca	FvH4_1g12210
malus_domestica	MD02G1136000.v1.1 MD15G1249600.v1.1
prunus_persica	Prupe.7G164600_v2.0.a1
pyrus_communis	pycom02g10730 pycom15g22000
rosa_chinensis	RchiOBHm_Chr2g0099701 RchiOBHm_Chr2g0099981
rosa_laevigata	RLG00000016909 RLG00000016927
rosa_multiflora	Rmu_co8406061.1_g000001 Rmu_sc0006209.1_g000001 Rmu_sc0008864.1_g000016 Rmu_sc0008864.1_g000017 Rmu_sc0013563.1_g000007
rosa_roxburghii	Rroxscaffold_2G00142680 Rroxscaffold_2G00142820
rosa_rugosa	Rorug02G0082600 Rorug02G0084600
rosa_samantha	Rh2AG133600 Rh2BG135100 Rh2BG137100 Rh2CG136100 Rh2CG138600 Rh2DG136500 Rh2DG139000
rosa_wichuraiana	Rw2G010230 Rw2G010390 Rw2G010410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	282
AccB1I	GGYRCC	1 cut(s)	1350
AccBSI	CCGCTC	1 cut(s)	1175
AccI	GTMKAC	1 cut(s)	93
AciI	CCGC	8 cut(s)	301, 697, 1155, 1175, 1356, 1359, 1390, 1405
AclWI	GGATC	6 cut(s)	174, 426, 502, 697, 739, 1028
AcoI	YGGCCR	1 cut(s)	698
AcsI	RAATTY	1 cut(s)	806
AcuI	CTGAAG	2 cut(s)	617, 1023
AcyI	GRCGYC	2 cut(s)	33, 1351
AfaI	GTAC	5 cut(s)	11, 29, 654, 670, 1071
AfiI	CCNNNNNNNGG	2 cut(s)	184, 523
AflIII	ACRYGT	1 cut(s)	330
AgsI	TTSAA	7 cut(s)	293, 545, 625, 1127, 1252, 1318, 1330
AjnI	CCWGG	1 cut(s)	206
AleI	CACNNNNGTG	1 cut(s)	1381
AluBI	AGCT	7 cut(s)	220, 776, 1004, 1028, 1119, 1264, 1402
AluI	AGCT	7 cut(s)	220, 776, 1004, 1028, 1119, 1264, 1402
Alw21I	GWGCWC	3 cut(s)	948, 1266, 1378
Alw26I	GTCTC	3 cut(s)	152, 1155, 1213
AlwI	GGATC	6 cut(s)	174, 426, 502, 697, 739, 1028
Ama87I	CYCGRG	1 cut(s)	1029
AoxI	GGCC	3 cut(s)	40, 112, 698
ApeKI	GCWGC	7 cut(s)	76, 410, 530, 586, 773, 776, 1116
ApoI	RAATTY	1 cut(s)	806
AspLEI	GCGC	4 cut(s)	64, 76, 283, 1353
AspS9I	GGNCC	4 cut(s)	112, 239, 298, 629
AsuC2I	CCSGG	3 cut(s)	111, 185, 1371
AsuHPI	GGTGA	3 cut(s)	109, 698, 860
AvaI	CYCGRG	1 cut(s)	1029
AvaII	GGWCC	3 cut(s)	239, 298, 629
BanI	GGYRCC	1 cut(s)	1350
BanII	GRGCYC	1 cut(s)	1266
BbsI	GAAGAC	1 cut(s)	40
Bbv12I	GWGCWC	3 cut(s)	948, 1266, 1378
BbvI	GCAGC	7 cut(s)	63, 397, 517, 573, 763, 785, 1128
BccI	CCATC	1 cut(s)	1226
BceAI	ACGGC	3 cut(s)	46, 205, 1364
BcgI	CGANNNNNNTGC	4 cut(s)	509, 543, 733, 767
BciT130I	CCWGG	1 cut(s)	208
BciVI	GTATCC	1 cut(s)	823
BclI	TGATCA	1 cut(s)	850
BcnI	CCSGG	3 cut(s)	111, 185, 1371
BcoDI	GTCTC	3 cut(s)	152, 1155, 1213
BfaI	CTAG	1 cut(s)	453
BfmI	CTRYAG	1 cut(s)	77
BfoI	RGCGCY	3 cut(s)	65, 77, 1354
BfuI	GTATCC	1 cut(s)	823
BglI	GCCNNNNNGGC	1 cut(s)	59
BisI	GCNGC	9 cut(s)	77, 411, 531, 587, 698, 774, 777, 1117, 1359
BlsI	GCNGC	9 cut(s)	78, 412, 532, 588, 699, 775, 778, 1118, 1360
BmcAI	AGTACT	1 cut(s)	1071
Bme1390I	CCNGG	4 cut(s)	111, 185, 208, 1371
Bme18I	GGWCC	3 cut(s)	239, 298, 629
BmeT110I	CYCGRG	1 cut(s)	1029
BmgT120I	GGNCC	4 cut(s)	112, 239, 298, 629
BmiI	GGNNCC	3 cut(s)	176, 1352, 1423
BmrFI	CCNGG	4 cut(s)	111, 185, 208, 1371
BmsI	GCATC	2 cut(s)	292, 391
BpiI	GAAGAC	1 cut(s)	40
BpmI	CTGGAG	2 cut(s)	597, 1179
Bpu10I	CCTNAGC	1 cut(s)	405
BpuMI	CCSGG	3 cut(s)	111, 185, 1371
Bsa29I	ATCGAT	1 cut(s)	675
BsaAI	YACGTR	2 cut(s)	13, 97
BsaHI	GRCGYC	2 cut(s)	33, 1351
BsaI	GGTCTC	1 cut(s)	1213
BsaJI	CCNNGG	5 cut(s)	183, 235, 662, 1369, 1382
BsaXI	ACNNNNNCTCC	2 cut(s)	30, 60
Bsc4I	CCNNNNNNNGG	2 cut(s)	184, 523
Bse118I	RCCGGY	2 cut(s)	53, 100
Bse1I	ACTGG	3 cut(s)	72, 93, 1299
Bse3DI	GCAATG	2 cut(s)	797, 976
BseBI	CCWGG	1 cut(s)	208
BseCI	ATCGAT	1 cut(s)	675
BseDI	CCNNGG	5 cut(s)	183, 235, 662, 1369, 1382
BseGI	GGATG	1 cut(s)	557
BseLI	CCNNNNNNNGG	2 cut(s)	184, 523
BseMI	GCAATG	2 cut(s)	797, 976
BseMII	CTCAG	2 cut(s)	419, 443
BseNI	ACTGG	3 cut(s)	72, 93, 1299
BseX3I	CGGCCG	1 cut(s)	698
BseXI	GCAGC	7 cut(s)	63, 397, 517, 573, 763, 785, 1128
BseYI	CCCAGC	1 cut(s)	139
BsgI	GTGCAG	2 cut(s)	507, 516
Bsh1285I	CGRYCG	1 cut(s)	701
BshFI	GGCC	3 cut(s)	42, 114, 700
BshNI	GGYRCC	1 cut(s)	1350
BshVI	ATCGAT	1 cut(s)	675
BsiEI	CGRYCG	1 cut(s)	701
BsiHKAI	GWGCWC	3 cut(s)	948, 1266, 1378
BsiHKCI	CYCGRG	1 cut(s)	1029
BsiSI	CCGG	5 cut(s)	54, 101, 110, 185, 1371
BsiWI	CGTACG	2 cut(s)	9, 652
BslFI	GGGAC	1 cut(s)	915
BslI	CCNNNNNNNGG	2 cut(s)	184, 523
BsmAI	GTCTC	3 cut(s)	152, 1155, 1213
BsmBI	CGTCTC	1 cut(s)	152
BsmFI	GGGAC	1 cut(s)	915
BsmI	GAATGC	1 cut(s)	271
BsnI	GGCC	3 cut(s)	42, 114, 700
Bso31I	GGTCTC	1 cut(s)	1213
BsoBI	CYCGRG	1 cut(s)	1029
Bsp1286I	GDGCHC	3 cut(s)	948, 1266, 1378
Bsp143I	GATC	7 cut(s)	179, 418, 494, 702, 744, 850, 1033
BspACI	CCGC	8 cut(s)	301, 697, 1155, 1175, 1356, 1359, 1390, 1405
BspANI	GGCC	3 cut(s)	42, 114, 700
BspCNI	CTCAG	2 cut(s)	418, 442
BspDI	ATCGAT	1 cut(s)	675
BspHI	TCATGA	1 cut(s)	1430
BspLI	GGNNCC	3 cut(s)	176, 1352, 1423
BspMAI	CTGCAG	1 cut(s)	81
BspPI	GGATC	6 cut(s)	174, 426, 502, 697, 739, 1028
BspQI	GCTCTTC	1 cut(s)	227
BspT107I	GGYRCC	1 cut(s)	1350
BspTNI	GGTCTC	1 cut(s)	1213
BsrBI	CCGCTC	1 cut(s)	1175
BsrDI	GCAATG	2 cut(s)	797, 976
BsrFI	RCCGGY	2 cut(s)	53, 100
BsrI	ACTGG	3 cut(s)	72, 93, 1299
BssAI	RCCGGY	2 cut(s)	53, 100
BssECI	CCNNGG	5 cut(s)	183, 235, 662, 1369, 1382
BssMI	GATC	7 cut(s)	179, 418, 494, 702, 744, 850, 1033
BssNI	GRCGYC	2 cut(s)	33, 1351
BssT1I	CCWWGG	1 cut(s)	662
Bst2UI	CCWGG	1 cut(s)	208
Bst4CI	ACNGT	3 cut(s)	818, 934, 1383
Bst6I	CTCTTC	1 cut(s)	227
BstACI	GRCGYC	2 cut(s)	33, 1351
BstAPI	GCANNNNNTGC	1 cut(s)	319
BstBAI	YACGTR	2 cut(s)	13, 97
BstC8I	GCNNGC	2 cut(s)	55, 1400
BstDEI	CTNAG	2 cut(s)	405, 429
BstDSI	CCRYGG	1 cut(s)	1382
BstF5I	GGATG	1 cut(s)	557
BstH2I	RGCGCY	3 cut(s)	65, 77, 1354
BstHHI	GCGC	4 cut(s)	64, 76, 283, 1353
BstKTI	GATC	7 cut(s)	182, 421, 497, 705, 747, 853, 1036
BstMAI	GTCTC	3 cut(s)	152, 1155, 1213
BstMBI	GATC	7 cut(s)	179, 418, 494, 702, 744, 850, 1033
BstMCI	CGRYCG	1 cut(s)	701
BstNI	CCWGG	1 cut(s)	208
BstNSI	RCATGY	2 cut(s)	754, 893
BstSCI	CCNGG	4 cut(s)	109, 183, 206, 1369
BstSFI	CTRYAG	1 cut(s)	77
BstV1I	GCAGC	7 cut(s)	63, 397, 517, 573, 763, 785, 1128
BstV2I	GAAGAC	1 cut(s)	40
BstX2I	RGATCY	2 cut(s)	494, 1033
BstYI	RGATCY	2 cut(s)	494, 1033
BstZI	CGGCCG	1 cut(s)	698
Bsu15I	ATCGAT	1 cut(s)	675
BsuI	GTATCC	1 cut(s)	823
BsuRI	GGCC	3 cut(s)	42, 114, 700
BsuTUI	ATCGAT	1 cut(s)	675
BtgI	CCRYGG	1 cut(s)	1382
BtgZI	GCGATG	1 cut(s)	1305
BtsCI	GGATG	1 cut(s)	557
BtsI	GCAGTG	2 cut(s)	329, 622
BtsIMutI	CAGTG	4 cut(s)	329, 533, 622, 1306
Cac8I	GCNNGC	2 cut(s)	55, 1400
CciI	TCATGA	1 cut(s)	1430
CfoI	GCGC	4 cut(s)	64, 76, 283, 1353
Cfr10I	RCCGGY	2 cut(s)	53, 100
Cfr13I	GGNCC	4 cut(s)	112, 239, 298, 629
ClaI	ATCGAT	1 cut(s)	675
CseI	GACGC	1 cut(s)	22
Csp6I	GTAC	5 cut(s)	10, 28, 653, 669, 1070
CspCI	CAANNNNNGTGG	2 cut(s)	1399, 1434
CviAII	CATG	7 cut(s)	58, 386, 571, 751, 890, 1333, 1431
CviQI	GTAC	5 cut(s)	10, 28, 653, 669, 1070
DdeI	CTNAG	2 cut(s)	405, 429
DinI	GGCGCC	1 cut(s)	1352
DpnI	GATC	7 cut(s)	181, 420, 496, 704, 746, 852, 1035
DpnII	GATC	7 cut(s)	179, 418, 494, 702, 744, 850, 1033
EaeI	YGGCCR	1 cut(s)	698
EagI	CGGCCG	1 cut(s)	698
Eam1104I	CTCTTC	1 cut(s)	227
EarI	CTCTTC	1 cut(s)	227
EciI	GGCGGA	2 cut(s)	1394, 1405
Ecl136II	GAGCTC	1 cut(s)	1264
EclXI	CGGCCG	1 cut(s)	698
Eco130I	CCWWGG	1 cut(s)	662
Eco147I	AGGCCT	1 cut(s)	42
Eco24I	GRGCYC	1 cut(s)	1266
Eco31I	GGTCTC	1 cut(s)	1213
Eco47I	GGWCC	3 cut(s)	239, 298, 629
Eco52I	CGGCCG	1 cut(s)	698
Eco53kI	GAGCTC	1 cut(s)	1264
Eco57I	CTGAAG	2 cut(s)	617, 1023
Eco88I	CYCGRG	1 cut(s)	1029
EcoICRI	GAGCTC	1 cut(s)	1264
EcoO109I	RGGNCCY	1 cut(s)	629
EcoRII	CCWGG	1 cut(s)	206
EcoT14I	CCWWGG	1 cut(s)	662
EcoT22I	ATGCAT	1 cut(s)	825
EcoT38I	GRGCYC	1 cut(s)	1266
EgeI	GGCGCC	1 cut(s)	1352
EheI	GGCGCC	1 cut(s)	1352
ErhI	CCWWGG	1 cut(s)	662
Esp3I	CGTCTC	1 cut(s)	152
FaeI	CATG	7 cut(s)	61, 389, 574, 754, 893, 1336, 1434
FalI	AAGNNNNNCTT	2 cut(s)	864, 896
FaqI	GGGAC	1 cut(s)	915
FatI	CATG	7 cut(s)	57, 385, 570, 750, 889, 1332, 1430
FauI	CCCGC	2 cut(s)	1168, 1363
FauNDI	CATATG	1 cut(s)	825
FbaI	TGATCA	1 cut(s)	850
FblI	GTMKAC	1 cut(s)	93
Fnu4HI	GCNGC	9 cut(s)	77, 411, 531, 587, 698, 774, 777, 1117, 1359
FokI	GGATG	1 cut(s)	544
FriOI	GRGCYC	1 cut(s)	1266
Fsp4HI	GCNGC	9 cut(s)	77, 411, 531, 587, 698, 774, 777, 1117, 1359
FspBI	CTAG	1 cut(s)	453
FspI	TGCGCA	1 cut(s)	282
GlaI	GCGC	4 cut(s)	63, 75, 282, 1352
GluI	GCNGC	9 cut(s)	77, 411, 531, 587, 698, 774, 777, 1117, 1359
GsaI	CCCAGC	1 cut(s)	143
GsuI	CTGGAG	2 cut(s)	597, 1179
HaeII	RGCGCY	3 cut(s)	65, 77, 1354
HaeIII	GGCC	3 cut(s)	42, 114, 700
HapII	CCGG	5 cut(s)	54, 101, 110, 185, 1371
HgaI	GACGC	1 cut(s)	22
HhaI	GCGC	4 cut(s)	64, 76, 283, 1353
Hin1I	GRCGYC	2 cut(s)	33, 1351
Hin1II	CATG	7 cut(s)	61, 389, 574, 754, 893, 1336, 1434
Hin6I	GCGC	4 cut(s)	62, 74, 281, 1351
HinP1I	GCGC	4 cut(s)	62, 74, 281, 1351
HinfI	GANTC	4 cut(s)	153, 736, 914, 1295
HpaII	CCGG	5 cut(s)	54, 101, 110, 185, 1371
HphI	GGTGA	3 cut(s)	109, 698, 860
Hpy166II	GTNNAC	1 cut(s)	94
Hpy188I	TCNGA	6 cut(s)	38, 152, 179, 432, 611, 1042
Hpy188III	TCNNGA	8 cut(s)	290, 453, 595, 812, 896, 1031, 1210, 1431
Hpy8I	GTNNAC	1 cut(s)	94
Hpy99I	CGWCG	1 cut(s)	38
HpyAV	CCTTC	6 cut(s)	387, 465, 562, 601, 1047, 1133
HpyCH4III	ACNGT	3 cut(s)	818, 934, 1383
HpyCH4IV	ACGT	5 cut(s)	12, 96, 168, 330, 655
HpyF3I	CTNAG	2 cut(s)	405, 429
HpySE526I	ACGT	5 cut(s)	12, 96, 168, 330, 655
Hsp92I	GRCGYC	2 cut(s)	33, 1351
Hsp92II	CATG	7 cut(s)	61, 389, 574, 754, 893, 1336, 1434
HspAI	GCGC	4 cut(s)	62, 74, 281, 1351
KasI	GGCGCC	1 cut(s)	1350
KroI	GCCGGC	1 cut(s)	53
KroNI	GCCGGC	1 cut(s)	55
Ksp22I	TGATCA	1 cut(s)	850
Kzo9I	GATC	7 cut(s)	179, 418, 494, 702, 744, 850, 1033
LguI	GCTCTTC	1 cut(s)	227
LmnI	GCTCC	7 cut(s)	82, 180, 359, 1124, 1269, 1373, 1407
Lsp1109I	GCAGC	7 cut(s)	63, 397, 517, 573, 763, 785, 1128
LweI	GCATC	2 cut(s)	292, 391
MaeI	CTAG	1 cut(s)	453
MaeII	ACGT	5 cut(s)	12, 96, 168, 330, 655
MaeIII	GTNAC	2 cut(s)	1012, 1200
MalI	GATC	7 cut(s)	181, 420, 496, 704, 746, 852, 1035
MbiI	CCGCTC	1 cut(s)	1175
MboI	GATC	7 cut(s)	179, 418, 494, 702, 744, 850, 1033
MboII	GAAGA	3 cut(s)	40, 214, 1039
MfeI	CAATTG	1 cut(s)	1148
MflI	RGATCY	2 cut(s)	494, 1033
MhlI	GDGCHC	3 cut(s)	948, 1266, 1378
MluCI	AATT	8 cut(s)	390, 643, 806, 1094, 1148, 1214, 1246, 1255
Mly113I	GGCGCC	1 cut(s)	1351
MlyI	GAGTC	1 cut(s)	147
MmeI	TCCRAC	6 cut(s)	16, 175, 266, 396, 472, 1291
Mph1103I	ATGCAT	1 cut(s)	825
MroNI	GCCGGC	1 cut(s)	53
MseI	TTAA	3 cut(s)	642, 693, 882
MslI	CAYNNNNRTG	2 cut(s)	755, 1381
MspA1I	CMGCKG	3 cut(s)	776, 1157, 1361
MspI	CCGG	5 cut(s)	54, 101, 110, 185, 1371
MspR9I	CCNGG	4 cut(s)	111, 185, 208, 1371
MunI	CAATTG	1 cut(s)	1148
Mva1269I	GAATGC	1 cut(s)	271
MvaI	CCWGG	1 cut(s)	208
NaeI	GCCGGC	1 cut(s)	55
NarI	GGCGCC	1 cut(s)	1351
NciI	CCSGG	3 cut(s)	111, 185, 1371
NdeI	CATATG	1 cut(s)	825
NdeII	GATC	7 cut(s)	179, 418, 494, 702, 744, 850, 1033
NgoMIV	GCCGGC	1 cut(s)	53
NlaIII	CATG	7 cut(s)	61, 389, 574, 754, 893, 1336, 1434
NlaIV	GGNNCC	3 cut(s)	176, 1352, 1423
NmeAIII	GCCGAG	1 cut(s)	260
NmuCI	GTSAC	1 cut(s)	1200
NsbI	TGCGCA	1 cut(s)	282
NsiI	ATGCAT	1 cut(s)	825
NspI	RCATGY	2 cut(s)	754, 893
OliI	CACNNNNGTG	1 cut(s)	1381
PaeR7I	CTCGAG	1 cut(s)	1029
PagI	TCATGA	1 cut(s)	1430
PceI	AGGCCT	1 cut(s)	42
PciSI	GCTCTTC	1 cut(s)	227
PctI	GAATGC	1 cut(s)	271
PdiI	GCCGGC	1 cut(s)	55
PfeI	GAWTC	3 cut(s)	736, 914, 1295
Pfl23II	CGTACG	2 cut(s)	9, 652
PkrI	GCNGC	9 cut(s)	78, 412, 532, 588, 699, 775, 778, 1118, 1360
PleI	GAGTC	1 cut(s)	147
PluTI	GGCGCC	1 cut(s)	1354
PpsI	GAGTC	1 cut(s)	147
Ppu21I	YACGTR	2 cut(s)	13, 97
PpuMI	RGGWCCY	1 cut(s)	629
Psp124BI	GAGCTC	1 cut(s)	1266
Psp5II	RGGWCCY	1 cut(s)	629
Psp6I	CCWGG	1 cut(s)	206
PspFI	CCCAGC	1 cut(s)	139
PspGI	CCWGG	1 cut(s)	206
PspLI	CGTACG	2 cut(s)	9, 652
PspN4I	GGNNCC	3 cut(s)	176, 1352, 1423
PspPI	GGNCC	4 cut(s)	112, 239, 298, 629
PspPPI	RGGWCCY	1 cut(s)	629
PstI	CTGCAG	1 cut(s)	81
PsuI	RGATCY	2 cut(s)	494, 1033
PvuII	CAGCTG	1 cut(s)	776
RsaI	GTAC	5 cut(s)	11, 29, 654, 670, 1071
RsaNI	GTAC	5 cut(s)	10, 28, 653, 669, 1070
RseI	CAYNNNNRTG	2 cut(s)	755, 1381
SacI	GAGCTC	1 cut(s)	1266
SapI	GCTCTTC	1 cut(s)	227
SaqAI	TTAA	3 cut(s)	642, 693, 882
SatI	GCNGC	9 cut(s)	77, 411, 531, 587, 698, 774, 777, 1117, 1359
Sau3AI	GATC	7 cut(s)	179, 418, 494, 702, 744, 850, 1033
Sau96I	GGNCC	4 cut(s)	112, 239, 298, 629
ScaI	AGTACT	1 cut(s)	1071
SchI	GAGTC	1 cut(s)	147
ScrFI	CCNGG	4 cut(s)	111, 185, 208, 1371
SduI	GDGCHC	3 cut(s)	948, 1266, 1378
SfaNI	GCATC	2 cut(s)	292, 391
SfcI	CTRYAG	1 cut(s)	77
SfoI	GGCGCC	1 cut(s)	1352
Sfr274I	CTCGAG	1 cut(s)	1029
SinI	GGWCC	3 cut(s)	239, 298, 629
SlaI	CTCGAG	1 cut(s)	1029
SmiMI	CAYNNNNRTG	2 cut(s)	755, 1381
SmlI	CTYRAG	1 cut(s)	1029
SmoI	CTYRAG	1 cut(s)	1029
Sse9I	AATT	8 cut(s)	390, 643, 806, 1094, 1148, 1214, 1246, 1255
SseBI	AGGCCT	1 cut(s)	42
SsiI	CCGC	8 cut(s)	301, 697, 1155, 1175, 1356, 1359, 1390, 1405
SspDI	GGCGCC	1 cut(s)	1350
SspI	AATATT	1 cut(s)	277
SspMI	CTAG	1 cut(s)	453
SstI	GAGCTC	1 cut(s)	1266
StuI	AGGCCT	1 cut(s)	42
StyD4I	CCNGG	4 cut(s)	109, 183, 206, 1369
StyI	CCWWGG	1 cut(s)	662
TaaI	ACNGT	3 cut(s)	818, 934, 1383
TaiI	ACGT	5 cut(s)	15, 99, 171, 333, 658
TaqI	TCGA	6 cut(s)	349, 675, 1030, 1211, 1277, 1310
TasI	AATT	8 cut(s)	390, 643, 806, 1094, 1148, 1214, 1246, 1255
TatI	WGTACW	2 cut(s)	668, 1069
TauI	GCSGC	2 cut(s)	700, 1361
TfiI	GAWTC	3 cut(s)	736, 914, 1295
Tru1I	TTAA	3 cut(s)	642, 693, 882
Tru9I	TTAA	3 cut(s)	642, 693, 882
TscAI	CASTG	4 cut(s)	329, 540, 622, 1306
TseFI	GTSAC	1 cut(s)	1200
TseI	GCWGC	7 cut(s)	76, 410, 530, 586, 773, 776, 1116
Tsp45I	GTSAC	1 cut(s)	1200
TspDTI	ATGAA	3 cut(s)	202, 927, 1308
TspRI	CASTG	4 cut(s)	329, 540, 622, 1306
VpaK11BI	GGWCC	3 cut(s)	239, 298, 629
XapI	RAATTY	1 cut(s)	806
XbaI	TCTAGA	1 cut(s)	452
XceI	RCATGY	2 cut(s)	754, 893
XcmI	CCANNNNNNNNNTGG	3 cut(s)	266, 568, 1154
XhoI	CTCGAG	1 cut(s)	1029
XmiI	GTMKAC	1 cut(s)	93
XspI	CTAG	1 cut(s)	453
ZrmI	AGTACT	1 cut(s)	1071
Zsp2I	ATGCAT	1 cut(s)	825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.