Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013563.1

Orthogroup ID

OG0005004

Physical Location & Seq

Genomic Coordinates Reverse (-)

18029 .. 19967

Gene Structure 1939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013563.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

atggactctcttatacaacaagccttacaacaacccgctcctattgcgcttctttccatgatccctgttctttttctccttggcgtattttttaggtcccgacggcgcttaccttatccgccgggacctaagggtctgcccatcatcggtaacatgctgatgatggaccagataacccaccgtggcctggccaaactagccaaacagtacggcggcatcttccacctccgcatggggttcttgcacatggtggctgtctcgaccgctgacgtcgctcggcaggttcttcaagtacaagacaacattttctcgaaccgaccggcgaccatcgccatcagctacctaacctacgaccgagccgacatggccttcgctcactatggacccttttggcgccagatgcgtaagctgtgcgtgatgaaactcttcagtcgcaaaagagccgagtcgtgggagtccgtgagggacgaggtcgacacggccgtgaggaccgtggcggccaacaccggctcggccgtcaacatcggggagctggtgttttcgctcaccaagaatattatttacagggctgcgtttgggaccagctcgaatgaagggcaggacgagttcattggcatactgcaggaattttccaagttgtttggggcattcaatattgcagatttcattccctgtctcgggtgggtagacccgcaagggcttaacaacaggctggctaaggctcgtgggtcgctggacaagttcatcgacaccatcatagacgaccacttgcagaagaagaaaaagacggggagtttggatgaaggtgaaactgacatggtggatgacttgttagcgttttacagtgaagaggcaaaagtgaatgagtcggaggataatttacaaaacgccatcaaacttaccagagataacatcaaagccatcatcatggacgtgatgtttggcgggacagagacggtggcgtcggcgatagagtgggccatgtcggagctaatgagaagtccagaagacctaaagaaggtccaacaggagctcgctgatgttgtgggcctagaccgcaggatcgaagagagtgacttcgagaagctgacttacctaaaatgcgcactcaaagagacactccggctgcacccgccaatccctctcctccttcacgagacgtcggaggacgcggaggtcgccggctacagcatccctaagaagtcacgcgtgatgatcaacgcgtgggcgattgggcgtgacaatgactcatgggaagacgccgagagtttcaagccctcgaggtttctcaaggaaggagttccggacttcaaggggagtaacttcgagttcattccgttcgggtcgggtcggaggtcgtgcccggggatgcagctggggctgtacgcgctggagctggcggtgggccacttgcttcattgtttcagttgggagttgcctgatgggatgaaacctagtgagcttgaaatgaacgacgtgtttggacttacggcgccgagagcaagtcgactcgtcgccgtaccgacaaaaagggtcgtgtgtccgctctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010224 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019438 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

516

Amino Acids

57.82

Weight (kDa)

5.95

Isoelectric Point (pI)

43.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36220
fragaria_vesca	FvH4_1g12210
malus_domestica	MD02G1136000.v1.1 MD15G1249600.v1.1
prunus_persica	Prupe.7G164600_v2.0.a1
pyrus_communis	pycom02g10730 pycom15g22000
rosa_chinensis	RchiOBHm_Chr2g0099701 RchiOBHm_Chr2g0099981
rosa_laevigata	RLG00000016909 RLG00000016927
rosa_multiflora	Rmu_co8406061.1_g000001 Rmu_sc0006209.1_g000001 Rmu_sc0008864.1_g000016 Rmu_sc0008864.1_g000017 Rmu_sc0013563.1_g000007
rosa_roxburghii	Rroxscaffold_2G00142680 Rroxscaffold_2G00142820
rosa_rugosa	Rorug02G0082600 Rorug02G0084600
rosa_samantha	Rh2AG133600 Rh2BG135100 Rh2BG137100 Rh2CG136100 Rh2CG138600 Rh2DG136500 Rh2DG139000
rosa_wichuraiana	Rw2G010230 Rw2G010390 Rw2G010410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	132, 961, 1175
AatII	GACGTC	2 cut(s)	273, 1163
AbsI	CCTCGAGG	1 cut(s)	1279
Acc16I	TGCGCA	1 cut(s)	1105
Acc36I	ACCTGC	1 cut(s)	271
AccB1I	GGYRCC	2 cut(s)	393, 1492
AccBSI	CCGCTC	2 cut(s)	38, 1546
AccI	GTMKAC	3 cut(s)	474, 687, 1507
AccII	CGCG	4 cut(s)	1172, 1209, 1223, 1388
AccIII	TCCGGA	1 cut(s)	1303
AclWI	GGATC	2 cut(s)	55, 1070
AcoI	YGGCCR	4 cut(s)	189, 480, 498, 513
AcsI	RAATTY	1 cut(s)	626
AcuI	CTGAAG	1 cut(s)	412
AcyI	GRCGYC	6 cut(s)	270, 394, 962, 1160, 1260, 1493
AdeI	CACNNNGTG	1 cut(s)	250
AfaI	GTAC	4 cut(s)	209, 294, 1385, 1521
AfiI	CCNNNNNNNGG	7 cut(s)	146, 187, 232, 450, 677, 678, 1018
AflIII	ACRYGT	3 cut(s)	1207, 1221, 1476
AgsI	TTSAA	5 cut(s)	290, 652, 1273, 1312, 1466
AjiI	CACGTC	2 cut(s)	934, 1477
AjnI	CCWGG	1 cut(s)	186
AleI	CACNNNNGTG	1 cut(s)	482
Alw21I	GWGCWC	1 cut(s)	1035
Alw26I	GTCTC	5 cut(s)	262, 680, 947, 1109, 1151
AlwI	GGATC	2 cut(s)	55, 1070
Ama87I	CYCGRG	3 cut(s)	677, 1279, 1363
Aor13HI	TCCGGA	1 cut(s)	1303
AoxI	GGCC	9 cut(s)	184, 189, 366, 480, 498, 513, 978, 1048, 1405
ApeKI	GCWGC	3 cut(s)	569, 1126, 1372
ApoI	RAATTY	1 cut(s)	626
ArsI	GACNNNNNNTTYG	6 cut(s)	353, 385, 778, 810, 923, 955
Asp700I	GAANNNNTTC	2 cut(s)	425, 1299
AspLEI	GCGC	6 cut(s)	49, 108, 396, 1106, 1390, 1495
AsuC2I	CCSGG	3 cut(s)	123, 1364, 1365
AsuHPI	GGTGA	2 cut(s)	538, 818
AvaI	CYCGRG	3 cut(s)	677, 1279, 1363
AvaII	GGWCC	7 cut(s)	96, 125, 166, 383, 489, 579, 1021
AxyI	CCTNAGG	1 cut(s)	129
BaeGI	GKGCMC	1 cut(s)	1364
BalI	TGGCCA	1 cut(s)	191
BanI	GGYRCC	2 cut(s)	393, 1492
BanII	GRGCYC	1 cut(s)	1035
BarI	GAAGNNNNNNTAC	2 cut(s)	1076, 1108
BauI	CACGAG	2 cut(s)	723, 1154
BbsI	GAAGAC	2 cut(s)	1014, 1263
Bbv12I	GWGCWC	1 cut(s)	1035
BbvI	GCAGC	3 cut(s)	556, 1113, 1384
BccI	CCATC	8 cut(s)	149, 157, 335, 341, 761, 899, 929, 1436
BceAI	ACGGC	7 cut(s)	119, 226, 467, 495, 500, 1502, 1506
BciT130I	CCWGG	1 cut(s)	188
BclI	TGATCA	1 cut(s)	1215
BcnI	CCSGG	3 cut(s)	123, 1364, 1365
BcoDI	GTCTC	5 cut(s)	262, 680, 947, 1109, 1151
BfaI	CTAG	3 cut(s)	197, 1052, 1455
BfmI	CTRYAG	2 cut(s)	620, 1186
BfoI	RGCGCY	3 cut(s)	109, 397, 1496
BfuAI	ACCTGC	1 cut(s)	271
BglI	GCCNNNNNGGC	1 cut(s)	365
BisI	GCNGC	5 cut(s)	214, 498, 570, 1127, 1373
BlsI	GCNGC	5 cut(s)	215, 499, 571, 1128, 1374
Bme1390I	CCNGG	4 cut(s)	123, 188, 1364, 1365
Bme18I	GGWCC	7 cut(s)	96, 125, 166, 383, 489, 579, 1021
BmeT110I	CYCGRG	3 cut(s)	677, 1279, 1363
BmgBI	CACGTC	2 cut(s)	934, 1477
BmiI	GGNNCC	6 cut(s)	98, 126, 385, 395, 580, 1494
BmrFI	CCNGG	4 cut(s)	123, 188, 1364, 1365
BmsI	GCATC	4 cut(s)	225, 390, 1200, 1359
BpiI	GAAGAC	2 cut(s)	1014, 1263
BpmI	CTGGAG	1 cut(s)	1412
Bpu10I	CCTNAGC	1 cut(s)	717
BpuEI	CTTGAG	1 cut(s)	1274
BpuMI	CCSGG	3 cut(s)	123, 1364, 1365
BsaHI	GRCGYC	6 cut(s)	270, 394, 962, 1160, 1260, 1493
BsaJI	CCNNGG	5 cut(s)	79, 181, 492, 1363, 1364
BsaWI	WCCGGW	1 cut(s)	1303
BsaXI	ACNNNNNCTCC	2 cut(s)	521, 551
Bsc4I	CCNNNNNNNGG	7 cut(s)	146, 187, 232, 450, 677, 678, 1018
Bse118I	RCCGGY	3 cut(s)	319, 506, 1181
Bse21I	CCTNAGG	1 cut(s)	129
BseAI	TCCGGA	1 cut(s)	1303
BseBI	CCWGG	1 cut(s)	188
BseDI	CCNNGG	5 cut(s)	79, 181, 492, 1363, 1364
BseGI	GGATG	5 cut(s)	805, 829, 1191, 1374, 1452
BseLI	CCNNNNNNNGG	7 cut(s)	146, 187, 232, 450, 677, 678, 1018
BseRI	GAGGAG	1 cut(s)	1136
BseSI	GKGCMC	1 cut(s)	1364
BseX3I	CGGCCG	2 cut(s)	480, 513
BseXI	GCAGC	3 cut(s)	556, 1113, 1384
BseYI	CCCAGC	1 cut(s)	1375
BsgI	GTGCAG	1 cut(s)	1112
Bsh1236I	CGCG	4 cut(s)	1172, 1209, 1223, 1388
Bsh1285I	CGRYCG	5 cut(s)	264, 320, 355, 483, 516
BshFI	GGCC	9 cut(s)	186, 191, 368, 482, 500, 515, 980, 1050, 1407
BshNI	GGYRCC	2 cut(s)	393, 1492
BsiEI	CGRYCG	5 cut(s)	264, 320, 355, 483, 516
BsiHKAI	GWGCWC	1 cut(s)	1035
BsiHKCI	CYCGRG	3 cut(s)	677, 1279, 1363
BsiSI	CCGG	7 cut(s)	122, 320, 507, 1123, 1182, 1304, 1364
BslFI	GGGAC	5 cut(s)	82, 138, 479, 592, 961
BslI	CCNNNNNNNGG	7 cut(s)	146, 187, 232, 450, 677, 678, 1018
BsmAI	GTCTC	5 cut(s)	262, 680, 947, 1109, 1151
BsmBI	CGTCTC	2 cut(s)	947, 1151
BsmFI	GGGAC	5 cut(s)	82, 138, 479, 592, 961
BsmI	GAATGC	1 cut(s)	647
BsnI	GGCC	9 cut(s)	186, 191, 368, 482, 500, 515, 980, 1050, 1407
BsoBI	CYCGRG	3 cut(s)	677, 1279, 1363
Bsp1286I	GDGCHC	2 cut(s)	1035, 1364
Bsp13I	TCCGGA	1 cut(s)	1303
Bsp143I	GATC	3 cut(s)	60, 1062, 1215
BspANI	GGCC	9 cut(s)	186, 191, 368, 482, 500, 515, 980, 1050, 1407
BspEI	TCCGGA	1 cut(s)	1303
BspFNI	CGCG	4 cut(s)	1172, 1209, 1223, 1388
BspLI	GGNNCC	6 cut(s)	98, 126, 385, 395, 580, 1494
BspMAI	CTGCAG	1 cut(s)	624
BspMI	ACCTGC	1 cut(s)	271
BspPI	GGATC	2 cut(s)	55, 1070
BspT107I	GGYRCC	2 cut(s)	393, 1492
BsrBI	CCGCTC	2 cut(s)	38, 1546
BsrFI	RCCGGY	3 cut(s)	319, 506, 1181
BssAI	RCCGGY	3 cut(s)	319, 506, 1181
BssECI	CCNNGG	5 cut(s)	79, 181, 492, 1363, 1364
BssMI	GATC	3 cut(s)	60, 1062, 1215
BssNI	GRCGYC	6 cut(s)	270, 394, 962, 1160, 1260, 1493
BssSI	CACGAG	2 cut(s)	723, 1154
BssT1I	CCWWGG	1 cut(s)	79
Bst2BI	CACGAG	2 cut(s)	723, 1154
Bst2UI	CCWGG	1 cut(s)	188
Bst4CI	ACNGT	5 cut(s)	182, 207, 493, 845, 958
Bst6I	CTCTTC	3 cut(s)	431, 843, 1062
BstACI	GRCGYC	6 cut(s)	270, 394, 962, 1160, 1260, 1493
BstC8I	GCNNGC	4 cut(s)	714, 1035, 1183, 1398
BstDEI	CTNAG	3 cut(s)	129, 717, 1197
BstDSI	CCRYGG	2 cut(s)	181, 492
BstENI	CCTNNNNNAGG	1 cut(s)	1016
BstF5I	GGATG	5 cut(s)	805, 829, 1191, 1374, 1452
BstFNI	CGCG	4 cut(s)	1172, 1209, 1223, 1388
BstH2I	RGCGCY	3 cut(s)	109, 397, 1496
BstHHI	GCGC	6 cut(s)	49, 108, 396, 1106, 1390, 1495
BstKTI	GATC	3 cut(s)	63, 1065, 1218
BstMAI	GTCTC	5 cut(s)	262, 680, 947, 1109, 1151
BstMBI	GATC	3 cut(s)	60, 1062, 1215
BstMCI	CGRYCG	5 cut(s)	264, 320, 355, 483, 516
BstNI	CCWGG	1 cut(s)	188
BstNSI	RCATGY	1 cut(s)	157
BstSCI	CCNGG	4 cut(s)	121, 186, 1362, 1363
BstSFI	CTRYAG	2 cut(s)	620, 1186
BstSLI	GKGCMC	1 cut(s)	1364
BstUI	CGCG	4 cut(s)	1172, 1209, 1223, 1388
BstV1I	GCAGC	3 cut(s)	556, 1113, 1384
BstV2I	GAAGAC	2 cut(s)	1014, 1263
BstXI	CCANNNNNNTGG	1 cut(s)	928
BstZI	CGGCCG	2 cut(s)	480, 513
Bsu36I	CCTNAGG	1 cut(s)	129
BsuRI	GGCC	9 cut(s)	186, 191, 368, 482, 500, 515, 980, 1050, 1407
BtgI	CCRYGG	2 cut(s)	181, 492
BtgZI	GCGATG	1 cut(s)	313
BtrI	CACGTC	2 cut(s)	934, 1477
BtsCI	GGATG	5 cut(s)	805, 829, 1191, 1374, 1452
BtsIMutI	CAGTG	1 cut(s)	850
BveI	ACCTGC	1 cut(s)	271
Cac8I	GCNNGC	4 cut(s)	714, 1035, 1183, 1398
CfoI	GCGC	6 cut(s)	49, 108, 396, 1106, 1390, 1495
Cfr10I	RCCGGY	3 cut(s)	319, 506, 1181
Cfr9I	CCCGGG	1 cut(s)	1363
CseI	GACGC	3 cut(s)	951, 1178, 1268
Csp6I	GTAC	4 cut(s)	208, 293, 1384, 1520
CviAII	CATG	9 cut(s)	58, 154, 232, 247, 364, 817, 928, 982, 1251
CviQI	GTAC	4 cut(s)	208, 293, 1384, 1520
DdeI	CTNAG	3 cut(s)	129, 717, 1197
DinI	GGCGCC	2 cut(s)	395, 1494
DpnI	GATC	3 cut(s)	62, 1064, 1217
DpnII	GATC	3 cut(s)	60, 1062, 1215
DraIII	CACNNNGTG	1 cut(s)	250
DrdI	GACNNNNNNGTC	3 cut(s)	132, 961, 1175
DseDI	GACNNNNNNGTC	3 cut(s)	132, 961, 1175
EaeI	YGGCCR	4 cut(s)	189, 480, 498, 513
EagI	CGGCCG	2 cut(s)	480, 513
Eam1104I	CTCTTC	3 cut(s)	431, 843, 1062
EarI	CTCTTC	3 cut(s)	431, 843, 1062
EciI	GGCGGA	1 cut(s)	108
Ecl136II	GAGCTC	1 cut(s)	1033
EclXI	CGGCCG	2 cut(s)	480, 513
Eco130I	CCWWGG	1 cut(s)	79
Eco24I	GRGCYC	1 cut(s)	1035
Eco47I	GGWCC	7 cut(s)	96, 125, 166, 383, 489, 579, 1021
Eco52I	CGGCCG	2 cut(s)	480, 513
Eco53kI	GAGCTC	1 cut(s)	1033
Eco57I	CTGAAG	1 cut(s)	412
Eco81I	CCTNAGG	1 cut(s)	129
Eco88I	CYCGRG	3 cut(s)	677, 1279, 1363
EcoICRI	GAGCTC	1 cut(s)	1033
EcoNI	CCTNNNNNAGG	1 cut(s)	1016
EcoO109I	RGGNCCY	2 cut(s)	96, 125
EcoRII	CCWGG	1 cut(s)	186
EcoT14I	CCWWGG	1 cut(s)	79
EcoT38I	GRGCYC	1 cut(s)	1035
EgeI	GGCGCC	2 cut(s)	395, 1494
EheI	GGCGCC	2 cut(s)	395, 1494
ErhI	CCWWGG	1 cut(s)	79
Esp3I	CGTCTC	2 cut(s)	947, 1151
FaeI	CATG	9 cut(s)	61, 157, 235, 250, 367, 820, 931, 985, 1254
FaqI	GGGAC	5 cut(s)	82, 138, 479, 592, 961
FatI	CATG	9 cut(s)	57, 153, 231, 246, 363, 816, 927, 981, 1250
FauI	CCCGC	4 cut(s)	43, 699, 938, 1140
FbaI	TGATCA	1 cut(s)	1215
FblI	GTMKAC	3 cut(s)	474, 687, 1507
Fnu4HI	GCNGC	5 cut(s)	214, 498, 570, 1127, 1373
FokI	GGATG	5 cut(s)	812, 836, 1178, 1381, 1459
FriOI	GRGCYC	1 cut(s)	1035
Fsp4HI	GCNGC	5 cut(s)	214, 498, 570, 1127, 1373
FspAI	RTGCGCAY	1 cut(s)	1105
FspBI	CTAG	3 cut(s)	197, 1052, 1455
FspI	TGCGCA	1 cut(s)	1105
GlaI	GCGC	6 cut(s)	48, 107, 395, 1105, 1389, 1494
GluI	GCNGC	5 cut(s)	214, 498, 570, 1127, 1373
GsaI	CCCAGC	1 cut(s)	1379
GsuI	CTGGAG	1 cut(s)	1412
HaeII	RGCGCY	3 cut(s)	109, 397, 1496
HaeIII	GGCC	9 cut(s)	186, 191, 368, 482, 500, 515, 980, 1050, 1407
HapII	CCGG	7 cut(s)	122, 320, 507, 1123, 1182, 1304, 1364
HgaI	GACGC	3 cut(s)	951, 1178, 1268
HhaI	GCGC	6 cut(s)	49, 108, 396, 1106, 1390, 1495
Hin1I	GRCGYC	6 cut(s)	270, 394, 962, 1160, 1260, 1493
Hin1II	CATG	9 cut(s)	61, 157, 235, 250, 367, 820, 931, 985, 1254
Hin6I	GCGC	6 cut(s)	47, 106, 394, 1104, 1388, 1493
HinP1I	GCGC	6 cut(s)	47, 106, 394, 1104, 1388, 1493
HincII	GTYRAC	3 cut(s)	475, 520, 1508
HindII	GTYRAC	3 cut(s)	475, 520, 1508
HinfI	GANTC	6 cut(s)	5, 446, 455, 866, 1247, 1509
HpaII	CCGG	7 cut(s)	122, 320, 507, 1123, 1182, 1304, 1364
HphI	GGTGA	2 cut(s)	538, 818
Hpy166II	GTNNAC	4 cut(s)	475, 520, 688, 1508
Hpy188I	TCNGA	5 cut(s)	871, 988, 1165, 1353, 1550
Hpy188III	TCNNGA	7 cut(s)	99, 259, 310, 1004, 1081, 1154, 1304
Hpy8I	GTNNAC	4 cut(s)	475, 520, 688, 1508
Hpy99I	CGWCG	6 cut(s)	105, 275, 967, 1165, 1478, 1517
HpyAV	CCTTC	6 cut(s)	379, 587, 797, 1012, 1160, 1289
HpyCH4III	ACNGT	5 cut(s)	182, 207, 493, 845, 958
HpyCH4IV	ACGT	4 cut(s)	270, 933, 1160, 1476
HpyCH4V	TGCA	6 cut(s)	244, 622, 659, 772, 1129, 1372
HpyF3I	CTNAG	3 cut(s)	129, 717, 1197
HpySE526I	ACGT	4 cut(s)	270, 933, 1160, 1476
Hsp92I	GRCGYC	6 cut(s)	270, 394, 962, 1160, 1260, 1493
Hsp92II	CATG	9 cut(s)	61, 157, 235, 250, 367, 820, 931, 985, 1254
HspAI	GCGC	6 cut(s)	47, 106, 394, 1104, 1388, 1493
KasI	GGCGCC	2 cut(s)	393, 1492
Kpn2I	TCCGGA	1 cut(s)	1303
KroI	GCCGGC	1 cut(s)	1181
KroNI	GCCGGC	1 cut(s)	1183
Ksp22I	TGATCA	1 cut(s)	1215
Kzo9I	GATC	3 cut(s)	60, 1062, 1215
LmnI	GCTCC	5 cut(s)	43, 529, 988, 1030, 1393
Lsp1109I	GCAGC	3 cut(s)	556, 1113, 1384
LweI	GCATC	4 cut(s)	225, 390, 1200, 1359
MaeI	CTAG	3 cut(s)	197, 1052, 1455
MaeII	ACGT	4 cut(s)	270, 933, 1160, 1476
MaeIII	GTNAC	5 cut(s)	149, 1073, 1203, 1238, 1319
MalI	GATC	3 cut(s)	62, 1064, 1217
MbiI	CCGCTC	2 cut(s)	38, 1546
MboI	GATC	3 cut(s)	60, 1062, 1215
MboII	GAAGA	9 cut(s)	211, 278, 418, 787, 790, 860, 1019, 1079, 1268
MhlI	GDGCHC	2 cut(s)	1035, 1364
MlsI	TGGCCA	1 cut(s)	191
MluCI	AATT	2 cut(s)	626, 877
MluI	ACGCGT	2 cut(s)	1207, 1221
MluNI	TGGCCA	1 cut(s)	191
Mly113I	GGCGCC	2 cut(s)	394, 1493
MlyI	GAGTC	5 cut(s)	455, 464, 875, 1241, 1503
MmeI	TCCRAC	5 cut(s)	849, 966, 1048, 1143, 1331
Mox20I	TGGCCA	1 cut(s)	191
MroI	TCCGGA	1 cut(s)	1303
MroNI	GCCGGC	1 cut(s)	1181
MroXI	GAANNNNTTC	2 cut(s)	425, 1299
MscI	TGGCCA	1 cut(s)	191
MseI	TTAA	1 cut(s)	702
MslI	CAYNNNNRTG	4 cut(s)	158, 482, 926, 932
Msp20I	TGGCCA	1 cut(s)	191
MspA1I	CMGCKG	2 cut(s)	266, 1375
MspI	CCGG	7 cut(s)	122, 320, 507, 1123, 1182, 1304, 1364
MspR9I	CCNGG	4 cut(s)	123, 188, 1364, 1365
Mva1269I	GAATGC	1 cut(s)	647
MvaI	CCWGG	1 cut(s)	188
MvnI	CGCG	4 cut(s)	1172, 1209, 1223, 1388
NaeI	GCCGGC	1 cut(s)	1183
NarI	GGCGCC	2 cut(s)	394, 1493
NciI	CCSGG	3 cut(s)	123, 1364, 1365
NdeII	GATC	3 cut(s)	60, 1062, 1215
NgoMIV	GCCGGC	1 cut(s)	1181
NlaIII	CATG	9 cut(s)	61, 157, 235, 250, 367, 820, 931, 985, 1254
NlaIV	GGNNCC	6 cut(s)	98, 126, 385, 395, 580, 1494
NmeAIII	GCCGAG	5 cut(s)	256, 469, 491, 1288, 1521
NmuCI	GTSAC	3 cut(s)	1073, 1203, 1238
NsbI	TGCGCA	1 cut(s)	1105
NspI	RCATGY	1 cut(s)	157
OliI	CACNNNNGTG	1 cut(s)	482
PaeR7I	CTCGAG	1 cut(s)	1279
PcsI	WCGNNNNNNNCGW	2 cut(s)	357, 480
PctI	GAATGC	1 cut(s)	647
PdiI	GCCGGC	1 cut(s)	1183
PdmI	GAANNNNTTC	2 cut(s)	425, 1299
PflFI	GACNNNGTC	1 cut(s)	470
PkrI	GCNGC	5 cut(s)	215, 499, 571, 1128, 1374
PleI	GAGTC	5 cut(s)	454, 463, 874, 1241, 1503
PluTI	GGCGCC	2 cut(s)	397, 1496
PpsI	GAGTC	5 cut(s)	454, 463, 874, 1241, 1503
PpuMI	RGGWCCY	2 cut(s)	96, 125
Psp124BI	GAGCTC	1 cut(s)	1035
Psp5II	RGGWCCY	2 cut(s)	96, 125
Psp6I	CCWGG	1 cut(s)	186
PspFI	CCCAGC	1 cut(s)	1375
PspGI	CCWGG	1 cut(s)	186
PspN4I	GGNNCC	6 cut(s)	98, 126, 385, 395, 580, 1494
PspPPI	RGGWCCY	2 cut(s)	96, 125
PspXI	VCTCGAGB	1 cut(s)	1279
PstI	CTGCAG	1 cut(s)	624
PsyI	GACNNNGTC	1 cut(s)	470
PvuII	CAGCTG	1 cut(s)	1375
RsaI	GTAC	4 cut(s)	209, 294, 1385, 1521
RsaNI	GTAC	4 cut(s)	208, 293, 1384, 1520
RseI	CAYNNNNRTG	4 cut(s)	158, 482, 926, 932
SacI	GAGCTC	1 cut(s)	1035
SalI	GTCGAC	2 cut(s)	473, 1506
SaqAI	TTAA	1 cut(s)	702
SatI	GCNGC	5 cut(s)	214, 498, 570, 1127, 1373
Sau3AI	GATC	3 cut(s)	60, 1062, 1215
SchI	GAGTC	5 cut(s)	455, 464, 875, 1241, 1503
ScrFI	CCNGG	4 cut(s)	123, 188, 1364, 1365
SduI	GDGCHC	2 cut(s)	1035, 1364
SfaNI	GCATC	4 cut(s)	225, 390, 1200, 1359
SfcI	CTRYAG	2 cut(s)	620, 1186
SfoI	GGCGCC	2 cut(s)	395, 1494
Sfr274I	CTCGAG	1 cut(s)	1279
SinI	GGWCC	7 cut(s)	96, 125, 166, 383, 489, 579, 1021
SlaI	CTCGAG	1 cut(s)	1279
SmaI	CCCGGG	1 cut(s)	1365
SmiMI	CAYNNNNRTG	4 cut(s)	158, 482, 926, 932
SmlI	CTYRAG	2 cut(s)	1279, 1289
SmoI	CTYRAG	2 cut(s)	1279, 1289
Sse9I	AATT	2 cut(s)	626, 877
SspDI	GGCGCC	2 cut(s)	393, 1492
SspI	AATATT	2 cut(s)	556, 655
SspMI	CTAG	3 cut(s)	197, 1052, 1455
SstI	GAGCTC	1 cut(s)	1035
StyD4I	CCNGG	4 cut(s)	121, 186, 1362, 1363
StyI	CCWWGG	1 cut(s)	79
TaaI	ACNGT	5 cut(s)	182, 207, 493, 845, 958
TaiI	ACGT	4 cut(s)	273, 936, 1163, 1479
TaqII	GACCGA	1 cut(s)	369
TasI	AATT	2 cut(s)	626, 877
TatI	WGTACW	1 cut(s)	292
TauI	GCSGC	2 cut(s)	216, 500
Tru1I	TTAA	1 cut(s)	702
Tru9I	TTAA	1 cut(s)	702
TscAI	CASTG	1 cut(s)	850
TseFI	GTSAC	3 cut(s)	1073, 1203, 1238
TseI	GCWGC	3 cut(s)	569, 1126, 1372
Tsp45I	GTSAC	3 cut(s)	1073, 1203, 1238
TspGWI	ACGGA	2 cut(s)	448, 1326
TspMI	CCCGGG	1 cut(s)	1363
TspRI	CASTG	1 cut(s)	850
Tth111I	GACNNNGTC	1 cut(s)	470
VpaK11BI	GGWCC	7 cut(s)	96, 125, 166, 383, 489, 579, 1021
XagI	CCTNNNNNAGG	1 cut(s)	1016
XapI	RAATTY	1 cut(s)	626
XceI	RCATGY	1 cut(s)	157
XhoI	CTCGAG	1 cut(s)	1279
XmaI	CCCGGG	1 cut(s)	1363
XmiI	GTMKAC	3 cut(s)	474, 687, 1507
XmnI	GAANNNNTTC	2 cut(s)	425, 1299
XspI	CTAG	3 cut(s)	197, 1052, 1455
ZraI	GACGTC	2 cut(s)	271, 1161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.