Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005004

Physical Location & Seq

Genomic Coordinates Forward (+)

80913709 .. 80916463

Gene Structure 2755 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00142820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGATTCTCTTATGCAAGGCCCCTTCATCCTATTCCTCATCATTATCCCTCCGACAATTTTACTGGGTTTAGTACTCTCCGCGTTATTGCCTCAGCAAAAGTTATCATACCCACCGGGGCCTAAAGGCTTGCCCATAATCGGCAACATGCGAATCATGGACCAGTTAACCCACAGAGGCCTCGCCAAACTCGCCAACCTATACGGCGGCATCCTCCATCTCCGCATGGGTTTCTTACACATGGTAGTCGTCTCGAGCGCTGACGTGGCCCGCCAAGTCCTCCAAGTCCAAGACATCACTTTCTCCAACCGCCCAGCCACAGTAGCCATTCGCTACCTCACCTACGACCGAGCGGACTTGGCCTTCGCTCATTACGGGCCGTTTTGGCGCCAGATGAGAAAGCTGTCTATCGTGAAGCTCTTCAGCCGGAAACGTGCCGATTCGTGGGAGTCCGTCAGGGACGAAGTTGACTCGACTGTGCGAGTCGTGTCGGCAAGAGCCGGCACCGCTGTGAACATAGGAGAGGTGGTGTTTTCGATGACCAAAAGTATAATATACAGGGCCGCGTTTGGGTCGAGCTCGAAGGAAGGGCAGGATGAGTTCATTGCAATAATGCGAGAGGTTTCCGAGCTGTTTGGAGCTTTTAATATAGCCGATTTCTTTCCTTGGCTTGGGTGGCTTGACCCACAAGGTATTAAACCCAGACTCGTTAAGTCTCGCACGTCACTGGACAAGTTCATTGATAACATCATAGACGACCACATCCAAAACAGTAAAGGTGAAGGTGATGAAACTGATATTGTTGATGATTTACTAGCCTTCAACAGAGACCAAGCAACTGGGAAGGAATCCGCCATCTTACTTACTAGAGATAACATCAAAGCCATTATTCTGGATGTTATGTTTGGCGGGACAGAGACAGTAGCGTCCACCATAGAATGGGCTATAACGGAACTAATGAGAAACCCAGAAGAGTTGAAGAAGGTCCAACAGGAACTTGTAGACGTGGTGGGCTTTGACCGTCGACTGCAAGAAAGCGACGTTGAGAACCTCCCTTACCTAAAATGTGCGCTTAAAGAAACACTACGACTTCACCCGCCGGTCCCTCTACTCCTCCACGAGACGGCTGAAGACACGGAAGTTTCTGGCTACCACATTCCGAAGAAGTCACACGTGATGATCAACGTGTGGGCTATTGGAAGGGATAAAGATTTCTGGGATGAGCCTGAGACGTTCATGCCCTCAAGGTTTCTCAAAGAAGGTATGCCTGACTTCAAGGGAAGTGGAAACTTTGATTATATTCCGTTCGGATCGGGTCGGAGGTCGTGCCCCGGTATGCAACTTGGGCGGCACATGCTGGAGTTGGCGGTGGGGCATTTGCTTCACTGCTTTACATGGGAGTTGGATAATGCTGGATCTGGAATTGACATGACTGATGTGTTTGGACTCACCACACCAAGAGCAAGTCGTCTTGTTGCTGTGCCAAATAAAAGGGTCGATGCTCCCCCTGTGACAGAATATAACTATTCCCATCCATTCCGGTTATTATTGGTGGACGATAACCTGCGCATTGATCGACCAGTGCATTCAGCCAACACTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010224 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019438 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

534

Amino Acids

60.08

Weight (kDa)

5.91

Isoelectric Point (pI)

37.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	38 - 483	5.5e-104	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36220
fragaria_vesca	FvH4_1g12210
malus_domestica	MD02G1136000.v1.1 MD15G1249600.v1.1
prunus_persica	Prupe.7G164600_v2.0.a1
pyrus_communis	pycom02g10730 pycom15g22000
rosa_chinensis	RchiOBHm_Chr2g0099701 RchiOBHm_Chr2g0099981
rosa_laevigata	RLG00000016909 RLG00000016927
rosa_multiflora	Rmu_co8406061.1_g000001 Rmu_sc0006209.1_g000001 Rmu_sc0008864.1_g000016 Rmu_sc0008864.1_g000017 Rmu_sc0013563.1_g000007
rosa_roxburghii	Rroxscaffold_2G00142680 Rroxscaffold_2G00142820
rosa_rugosa	Rorug02G0082600 Rorug02G0084600
rosa_samantha	Rh2AG133600 Rh2BG135100 Rh2BG137100 Rh2CG136100 Rh2CG138600 Rh2DG136500 Rh2DG139000
rosa_wichuraiana	Rw2G010230 Rw2G010390 Rw2G010410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	925
Acc16I	TGCGCA	1 cut(s)	1568
Acc36I	ACCTGC	1 cut(s)	1572
AccB1I	GGYRCC	2 cut(s)	387, 503
AccB7I	CCANNNNNTGG	1 cut(s)	939
AccBSI	CCGCTC	1 cut(s)	353
AccI	GTMKAC	2 cut(s)	1002, 1024
AccII	CGCG	2 cut(s)	83, 566
AclWI	GGATC	2 cut(s)	1318, 1423
AcuI	CTGAAG	2 cut(s)	406, 1149
AcvI	CACGTG	1 cut(s)	1174
AcyI	GRCGYC	1 cut(s)	388
AfaI	GTAC	1 cut(s)	75
AfeI	AGCGCT	1 cut(s)	259
AfiI	CCNNNNNNNGG	6 cut(s)	140, 444, 570, 671, 939, 1123
AflIII	ACRYGT	2 cut(s)	1171, 1185
AgsI	TTSAA	3 cut(s)	823, 979, 1276
AjiI	CACGTC	3 cut(s)	265, 723, 1006
AleI	CACNNNNGTG	1 cut(s)	509
AluBI	AGCT	5 cut(s)	403, 418, 579, 631, 641
AluI	AGCT	5 cut(s)	403, 418, 579, 631, 641
Alw21I	GWGCWC	1 cut(s)	581
Alw26I	GTCTC	6 cut(s)	256, 720, 822, 911, 1115, 1223
AlwI	GGATC	2 cut(s)	1318, 1423
Ama87I	CYCGRG	1 cut(s)	253
Aor51HI	AGCGCT	1 cut(s)	259
AoxI	GGCC	7 cut(s)	19, 119, 178, 267, 360, 377, 561
ArsI	GACNNNNNNTTYG	2 cut(s)	347, 379
Asp700I	GAANNNNTTC	1 cut(s)	419
AspLEI	GCGC	4 cut(s)	260, 390, 1072, 1569
AspS9I	GGNCC	8 cut(s)	20, 119, 160, 268, 377, 561, 985, 1102
AsuC2I	CCSGG	2 cut(s)	117, 1332
AsuHPI	GGTGA	5 cut(s)	331, 791, 797, 1085, 1441
AvaI	CYCGRG	1 cut(s)	253
AvaII	GGWCC	3 cut(s)	160, 985, 1102
BaeGI	GKGCMC	1 cut(s)	1331
BanI	GGYRCC	2 cut(s)	387, 503
BanII	GRGCYC	1 cut(s)	581
BauI	CACGAG	1 cut(s)	1118
BbrPI	CACGTG	1 cut(s)	1174
BbsI	GAAGAC	1 cut(s)	1137
Bbv12I	GWGCWC	1 cut(s)	581
BbvCI	CCTCAGC	1 cut(s)	93
BccI	CCATC	3 cut(s)	225, 863, 1539
BceAI	ACGGC	3 cut(s)	220, 364, 1140
BclI	TGATCA	1 cut(s)	1179
BcnI	CCSGG	2 cut(s)	117, 1332
BcoDI	GTCTC	6 cut(s)	256, 720, 822, 911, 1115, 1223
BfaI	CTAG	2 cut(s)	815, 867
BfoI	RGCGCY	2 cut(s)	261, 391
BfuAI	ACCTGC	1 cut(s)	1572
BglI	GCCNNNNNGGC	1 cut(s)	385
BisI	GCNGC	3 cut(s)	208, 564, 1349
BlsI	GCNGC	3 cut(s)	209, 565, 1350
BmcAI	AGTACT	1 cut(s)	75
Bme1390I	CCNGG	2 cut(s)	117, 1332
Bme18I	GGWCC	3 cut(s)	160, 985, 1102
BmeT110I	CYCGRG	1 cut(s)	253
BmgBI	CACGTC	3 cut(s)	265, 723, 1006
BmgT120I	GGNCC	8 cut(s)	20, 119, 160, 268, 377, 561, 985, 1102
BmiI	GGNNCC	5 cut(s)	22, 120, 389, 505, 1104
BmrFI	CCNGG	2 cut(s)	117, 1332
BmrI	ACTGGG	2 cut(s)	74, 849
BmsI	GCATC	2 cut(s)	219, 1489
BmuI	ACTGGG	2 cut(s)	74, 849
BpiI	GAAGAC	1 cut(s)	1137
BpmI	CTGGAG	1 cut(s)	1379
Bpu10I	CCTNAGC	1 cut(s)	93
BpuEI	CTTGAG	1 cut(s)	1228
BpuMI	CCSGG	2 cut(s)	117, 1332
BsaAI	YACGTR	1 cut(s)	1174
BsaHI	GRCGYC	1 cut(s)	388
BsaI	GGTCTC	1 cut(s)	822
BsaJI	CCNNGG	3 cut(s)	116, 665, 1330
BsaWI	WCCGGW	1 cut(s)	1539
BsaXI	ACNNNNNCTCC	2 cut(s)	513, 543
Bsc4I	CCNNNNNNNGG	6 cut(s)	140, 444, 570, 671, 939, 1123
Bse118I	RCCGGY	2 cut(s)	500, 1099
Bse1I	ACTGG	5 cut(s)	69, 163, 732, 844, 1580
Bse3DI	GCAATG	1 cut(s)	603
BseDI	CCNNGG	3 cut(s)	116, 665, 1330
BseGI	GGATG	7 cut(s)	27, 210, 601, 762, 901, 1225, 1531
BseLI	CCNNNNNNNGG	6 cut(s)	140, 444, 570, 671, 939, 1123
BseMI	GCAATG	1 cut(s)	603
BseMII	CTCAG	2 cut(s)	107, 1218
BseNI	ACTGG	5 cut(s)	69, 163, 732, 844, 1580
BseRI	GAGGAG	1 cut(s)	1103
BseSI	GKGCMC	1 cut(s)	1331
BseYI	CCCAGC	1 cut(s)	313
Bsh1236I	CGCG	2 cut(s)	83, 566
Bsh1285I	CGRYCG	1 cut(s)	349
BshFI	GGCC	7 cut(s)	21, 121, 180, 269, 362, 379, 563
BshNI	GGYRCC	2 cut(s)	387, 503
BsiEI	CGRYCG	1 cut(s)	349
BsiHKAI	GWGCWC	1 cut(s)	581
BsiHKCI	CYCGRG	1 cut(s)	253
BsiSI	CCGG	6 cut(s)	116, 427, 501, 1100, 1332, 1540
BslFI	GGGAC	3 cut(s)	473, 925, 1088
BslI	CCNNNNNNNGG	6 cut(s)	140, 444, 570, 671, 939, 1123
BsmAI	GTCTC	6 cut(s)	256, 720, 822, 911, 1115, 1223
BsmBI	CGTCTC	3 cut(s)	256, 1115, 1223
BsmFI	GGGAC	3 cut(s)	473, 925, 1088
BsmI	GAATGC	1 cut(s)	1585
BsnI	GGCC	7 cut(s)	21, 121, 180, 269, 362, 379, 563
Bso31I	GGTCTC	1 cut(s)	822
BsoBI	CYCGRG	1 cut(s)	253
Bsp1286I	GDGCHC	2 cut(s)	581, 1331
Bsp143I	GATC	4 cut(s)	1179, 1310, 1415, 1573
BspANI	GGCC	7 cut(s)	21, 121, 180, 269, 362, 379, 563
BspCNI	CTCAG	2 cut(s)	106, 1219
BspFNI	CGCG	2 cut(s)	83, 566
BspLI	GGNNCC	5 cut(s)	22, 120, 389, 505, 1104
BspMI	ACCTGC	1 cut(s)	1572
BspPI	GGATC	2 cut(s)	1318, 1423
BspQI	GCTCTTC	1 cut(s)	425
BspT107I	GGYRCC	2 cut(s)	387, 503
BspTNI	GGTCTC	1 cut(s)	822
BsrBI	CCGCTC	1 cut(s)	353
BsrDI	GCAATG	1 cut(s)	603
BsrFI	RCCGGY	2 cut(s)	500, 1099
BsrI	ACTGG	5 cut(s)	69, 163, 732, 844, 1580
BssAI	RCCGGY	2 cut(s)	500, 1099
BssECI	CCNNGG	3 cut(s)	116, 665, 1330
BssMI	GATC	4 cut(s)	1179, 1310, 1415, 1573
BssNI	GRCGYC	1 cut(s)	388
BssSI	CACGAG	1 cut(s)	1118
BssT1I	CCWWGG	1 cut(s)	665
Bst2BI	CACGAG	1 cut(s)	1118
Bst4CI	ACNGT	5 cut(s)	322, 478, 773, 922, 1022
Bst6I	CTCTTC	2 cut(s)	425, 966
BstACI	GRCGYC	1 cut(s)	388
BstBAI	YACGTR	1 cut(s)	1174
BstC8I	GCNNGC	3 cut(s)	131, 271, 502
BstDEI	CTNAG	2 cut(s)	93, 1227
BstF5I	GGATG	7 cut(s)	27, 210, 601, 762, 901, 1225, 1531
BstFNI	CGCG	2 cut(s)	83, 566
BstH2I	RGCGCY	2 cut(s)	261, 391
BstHHI	GCGC	4 cut(s)	260, 390, 1072, 1569
BstKTI	GATC	4 cut(s)	1182, 1313, 1418, 1576
BstMAI	GTCTC	6 cut(s)	256, 720, 822, 911, 1115, 1223
BstMBI	GATC	4 cut(s)	1179, 1310, 1415, 1573
BstMCI	CGRYCG	1 cut(s)	349
BstMWI	GCNNNNNNNGC	9 cut(s)	191, 266, 323, 359, 385, 506, 676, 1345, 1354
BstNSI	RCATGY	2 cut(s)	151, 1357
BstSCI	CCNGG	2 cut(s)	115, 1330
BstSLI	GKGCMC	1 cut(s)	1331
BstUI	CGCG	2 cut(s)	83, 566
BstV2I	GAAGAC	1 cut(s)	1137
BstX2I	RGATCY	1 cut(s)	1415
BstXI	CCANNNNNNTGG	2 cut(s)	839, 892
BstYI	RGATCY	1 cut(s)	1415
BsuRI	GGCC	7 cut(s)	21, 121, 180, 269, 362, 379, 563
BtrI	CACGTC	3 cut(s)	265, 723, 1006
BtsCI	GGATG	7 cut(s)	27, 210, 601, 762, 901, 1225, 1531
BtsI	GCAGTG	1 cut(s)	1384
BtsIMutI	CAGTG	4 cut(s)	725, 1384, 1587, 1596
BveI	ACCTGC	1 cut(s)	1572
Cac8I	GCNNGC	3 cut(s)	131, 271, 502
CfoI	GCGC	4 cut(s)	260, 390, 1072, 1569
Cfr10I	RCCGGY	2 cut(s)	500, 1099
Cfr13I	GGNCC	8 cut(s)	20, 119, 160, 268, 377, 561, 985, 1102
CseI	GACGC	1 cut(s)	915
Csp6I	GTAC	1 cut(s)	74
CspCI	CAANNNNNGTGG	2 cut(s)	1264, 1299
CviAII	CATG	8 cut(s)	148, 157, 226, 241, 1237, 1354, 1395, 1429
CviQI	GTAC	1 cut(s)	74
DdeI	CTNAG	2 cut(s)	93, 1227
DinI	GGCGCC	1 cut(s)	389
DpnI	GATC	4 cut(s)	1181, 1312, 1417, 1575
DpnII	GATC	4 cut(s)	1179, 1310, 1415, 1573
DrdI	GACNNNNNNGTC	1 cut(s)	925
DseDI	GACNNNNNNGTC	1 cut(s)	925
Eam1104I	CTCTTC	2 cut(s)	425, 966
EarI	CTCTTC	2 cut(s)	425, 966
EciI	GGCGGA	1 cut(s)	841
Ecl136II	GAGCTC	1 cut(s)	579
Eco130I	CCWWGG	1 cut(s)	665
Eco147I	AGGCCT	1 cut(s)	180
Eco24I	GRGCYC	1 cut(s)	581
Eco31I	GGTCTC	1 cut(s)	822
Eco47I	GGWCC	3 cut(s)	160, 985, 1102
Eco47III	AGCGCT	1 cut(s)	259
Eco53kI	GAGCTC	1 cut(s)	579
Eco57I	CTGAAG	2 cut(s)	406, 1149
Eco72I	CACGTG	1 cut(s)	1174
Eco88I	CYCGRG	1 cut(s)	253
EcoICRI	GAGCTC	1 cut(s)	579
EcoO109I	RGGNCCY	2 cut(s)	20, 119
EcoT14I	CCWWGG	1 cut(s)	665
EcoT38I	GRGCYC	1 cut(s)	581
EgeI	GGCGCC	1 cut(s)	389
EheI	GGCGCC	1 cut(s)	389
ErhI	CCWWGG	1 cut(s)	665
Esp3I	CGTCTC	3 cut(s)	256, 1115, 1223
FaeI	CATG	8 cut(s)	151, 160, 229, 244, 1240, 1357, 1398, 1432
FaqI	GGGAC	3 cut(s)	473, 925, 1088
FatI	CATG	8 cut(s)	147, 156, 225, 240, 1236, 1353, 1394, 1428
FauI	CCCGC	3 cut(s)	278, 902, 1104
FbaI	TGATCA	1 cut(s)	1179
FblI	GTMKAC	2 cut(s)	1002, 1024
Fnu4HI	GCNGC	3 cut(s)	208, 564, 1349
FokI	GGATG	7 cut(s)	14, 197, 608, 749, 908, 1232, 1518
FriOI	GRGCYC	1 cut(s)	581
Fsp4HI	GCNGC	3 cut(s)	208, 564, 1349
FspBI	CTAG	2 cut(s)	815, 867
FspI	TGCGCA	1 cut(s)	1568
GlaI	GCGC	4 cut(s)	259, 389, 1071, 1568
GluI	GCNGC	3 cut(s)	208, 564, 1349
GsaI	CCCAGC	1 cut(s)	317
GsuI	CTGGAG	1 cut(s)	1379
HaeII	RGCGCY	2 cut(s)	261, 391
HaeIII	GGCC	7 cut(s)	21, 121, 180, 269, 362, 379, 563
HapII	CCGG	6 cut(s)	116, 427, 501, 1100, 1332, 1540
HgaI	GACGC	1 cut(s)	915
HhaI	GCGC	4 cut(s)	260, 390, 1072, 1569
Hin1I	GRCGYC	1 cut(s)	388
Hin1II	CATG	8 cut(s)	151, 160, 229, 244, 1240, 1357, 1398, 1432
Hin6I	GCGC	4 cut(s)	258, 388, 1070, 1567
HinP1I	GCGC	4 cut(s)	258, 388, 1070, 1567
HincII	GTYRAC	3 cut(s)	168, 469, 1025
HindII	GTYRAC	3 cut(s)	168, 469, 1025
HinfI	GANTC	9 cut(s)	5, 153, 440, 449, 470, 483, 705, 848, 1446
HpaI	GTTAAC	1 cut(s)	168
HpaII	CCGG	6 cut(s)	116, 427, 501, 1100, 1332, 1540
HphI	GGTGA	5 cut(s)	331, 791, 797, 1085, 1441
Hpy166II	GTNNAC	7 cut(s)	168, 469, 514, 930, 1003, 1025, 1555
Hpy188I	TCNGA	5 cut(s)	54, 628, 1161, 1310, 1320
Hpy188III	TCNNGA	4 cut(s)	253, 412, 893, 1419
Hpy8I	GTNNAC	7 cut(s)	168, 469, 514, 930, 1003, 1025, 1555
Hpy99I	CGWCG	2 cut(s)	1026, 1043
HpyCH4III	ACNGT	5 cut(s)	322, 478, 773, 922, 1022
HpyCH4IV	ACGT	8 cut(s)	264, 433, 722, 1005, 1041, 1173, 1185, 1232
HpyCH4V	TGCA	5 cut(s)	16, 608, 1030, 1339, 1585
HpyF10VI	GCNNNNNNNGC	9 cut(s)	191, 266, 323, 359, 385, 506, 676, 1345, 1354
HpyF3I	CTNAG	2 cut(s)	93, 1227
HpySE526I	ACGT	8 cut(s)	264, 433, 722, 1005, 1041, 1173, 1185, 1232
Hsp92I	GRCGYC	1 cut(s)	388
Hsp92II	CATG	8 cut(s)	151, 160, 229, 244, 1240, 1357, 1398, 1432
HspAI	GCGC	4 cut(s)	258, 388, 1070, 1567
KasI	GGCGCC	1 cut(s)	387
KroI	GCCGGC	1 cut(s)	500
KroNI	GCCGGC	1 cut(s)	502
Ksp22I	TGATCA	1 cut(s)	1179
KspAI	GTTAAC	1 cut(s)	168
Kzo9I	GATC	4 cut(s)	1179, 1310, 1415, 1573
LguI	GCTCTTC	1 cut(s)	425
LmnI	GCTCC	2 cut(s)	638, 1507
LweI	GCATC	2 cut(s)	219, 1489
MaeI	CTAG	2 cut(s)	815, 867
MaeII	ACGT	8 cut(s)	264, 433, 722, 1005, 1041, 1173, 1185, 1232
MaeIII	GTNAC	3 cut(s)	723, 1167, 1510
MalI	GATC	4 cut(s)	1181, 1312, 1417, 1575
MbiI	CCGCTC	1 cut(s)	353
MboI	GATC	4 cut(s)	1179, 1310, 1415, 1573
MboII	GAAGA	5 cut(s)	412, 983, 991, 1142, 1174
MflI	RGATCY	1 cut(s)	1415
MhlI	GDGCHC	2 cut(s)	581, 1331
MluCI	AATT	2 cut(s)	57, 1422
Mly113I	GGCGCC	1 cut(s)	388
MlyI	GAGTC	5 cut(s)	458, 464, 492, 699, 1440
MmeI	TCCRAC	5 cut(s)	77, 330, 1012, 1298, 1383
MroNI	GCCGGC	1 cut(s)	500
MroXI	GAANNNNTTC	1 cut(s)	419
MseI	TTAA	5 cut(s)	167, 645, 696, 711, 1074
MslI	CAYNNNNRTG	1 cut(s)	509
MspA1I	CMGCKG	1 cut(s)	509
MspI	CCGG	6 cut(s)	116, 427, 501, 1100, 1332, 1540
MspR9I	CCNGG	2 cut(s)	117, 1332
Mva1269I	GAATGC	1 cut(s)	1585
MvnI	CGCG	2 cut(s)	83, 566
MwoI	GCNNNNNNNGC	9 cut(s)	191, 266, 323, 359, 385, 506, 676, 1345, 1354
NaeI	GCCGGC	1 cut(s)	502
NarI	GGCGCC	1 cut(s)	388
NciI	CCSGG	2 cut(s)	117, 1332
NdeII	GATC	4 cut(s)	1179, 1310, 1415, 1573
NgoMIV	GCCGGC	1 cut(s)	500
NlaIII	CATG	8 cut(s)	151, 160, 229, 244, 1240, 1357, 1398, 1432
NlaIV	GGNNCC	5 cut(s)	22, 120, 389, 505, 1104
NmuCI	GTSAC	3 cut(s)	723, 1167, 1510
NsbI	TGCGCA	1 cut(s)	1568
NspI	RCATGY	2 cut(s)	151, 1357
OliI	CACNNNNGTG	1 cut(s)	509
PaeR7I	CTCGAG	1 cut(s)	253
PceI	AGGCCT	1 cut(s)	180
PciSI	GCTCTTC	1 cut(s)	425
PctI	GAATGC	1 cut(s)	1585
PdiI	GCCGGC	1 cut(s)	502
PdmI	GAANNNNTTC	1 cut(s)	419
PfeI	GAWTC	4 cut(s)	5, 153, 440, 848
PflMI	CCANNNNNTGG	1 cut(s)	939
PkrI	GCNGC	3 cut(s)	209, 565, 1350
PleI	GAGTC	5 cut(s)	457, 464, 491, 699, 1440
PluTI	GGCGCC	1 cut(s)	391
PmaCI	CACGTG	1 cut(s)	1174
PmlI	CACGTG	1 cut(s)	1174
PpsI	GAGTC	5 cut(s)	457, 464, 491, 699, 1440
Ppu21I	YACGTR	1 cut(s)	1174
Psp124BI	GAGCTC	1 cut(s)	581
PspCI	CACGTG	1 cut(s)	1174
PspFI	CCCAGC	1 cut(s)	313
PspN4I	GGNNCC	5 cut(s)	22, 120, 389, 505, 1104
PspPI	GGNCC	8 cut(s)	20, 119, 160, 268, 377, 561, 985, 1102
PsrI	GAACNNNNNNTAC	2 cut(s)	1040, 1072
PsuI	RGATCY	1 cut(s)	1415
RsaI	GTAC	1 cut(s)	75
RsaNI	GTAC	1 cut(s)	74
RseI	CAYNNNNRTG	1 cut(s)	509
SacI	GAGCTC	1 cut(s)	581
SalI	GTCGAC	1 cut(s)	1023
SapI	GCTCTTC	1 cut(s)	425
SaqAI	TTAA	5 cut(s)	167, 645, 696, 711, 1074
SatI	GCNGC	3 cut(s)	208, 564, 1349
Sau3AI	GATC	4 cut(s)	1179, 1310, 1415, 1573
Sau96I	GGNCC	8 cut(s)	20, 119, 160, 268, 377, 561, 985, 1102
ScaI	AGTACT	1 cut(s)	75
SchI	GAGTC	5 cut(s)	458, 464, 492, 699, 1440
ScrFI	CCNGG	2 cut(s)	117, 1332
SduI	GDGCHC	2 cut(s)	581, 1331
SfaNI	GCATC	2 cut(s)	219, 1489
SfoI	GGCGCC	1 cut(s)	389
Sfr274I	CTCGAG	1 cut(s)	253
SinI	GGWCC	3 cut(s)	160, 985, 1102
SlaI	CTCGAG	1 cut(s)	253
SmiMI	CAYNNNNRTG	1 cut(s)	509
SmlI	CTYRAG	2 cut(s)	253, 1243
SmoI	CTYRAG	2 cut(s)	253, 1243
Sse9I	AATT	2 cut(s)	57, 1422
SseBI	AGGCCT	1 cut(s)	180
SspDI	GGCGCC	1 cut(s)	387
SspMI	CTAG	2 cut(s)	815, 867
SstI	GAGCTC	1 cut(s)	581
StuI	AGGCCT	1 cut(s)	180
StyD4I	CCNGG	2 cut(s)	115, 1330
StyI	CCWWGG	1 cut(s)	665
TaaI	ACNGT	5 cut(s)	322, 478, 773, 922, 1022
TaiI	ACGT	8 cut(s)	267, 436, 725, 1008, 1044, 1176, 1188, 1235
TaqI	TCGA	8 cut(s)	254, 473, 536, 575, 581, 1024, 1497, 1576
TaqII	GACCGA	1 cut(s)	363
TasI	AATT	2 cut(s)	57, 1422
TatI	WGTACW	1 cut(s)	73
TauI	GCSGC	3 cut(s)	210, 566, 1351
TfiI	GAWTC	4 cut(s)	5, 153, 440, 848
Tru1I	TTAA	5 cut(s)	167, 645, 696, 711, 1074
Tru9I	TTAA	5 cut(s)	167, 645, 696, 711, 1074
TscAI	CASTG	4 cut(s)	732, 1391, 1587, 1603
TseFI	GTSAC	3 cut(s)	723, 1167, 1510
Tsp45I	GTSAC	3 cut(s)	723, 1167, 1510
TspDTI	ATGAA	5 cut(s)	16, 592, 727, 804, 1225
TspGWI	ACGGA	4 cut(s)	442, 965, 1151, 1293
TspRI	CASTG	4 cut(s)	732, 1391, 1587, 1603
Van91I	CCANNNNNTGG	1 cut(s)	939
VpaK11BI	GGWCC	3 cut(s)	160, 985, 1102
XceI	RCATGY	2 cut(s)	151, 1357
XhoI	CTCGAG	1 cut(s)	253
XmiI	GTMKAC	2 cut(s)	1002, 1024
XmnI	GAANNNNTTC	1 cut(s)	419
XspI	CTAG	2 cut(s)	815, 867
ZrmI	AGTACT	1 cut(s)	75

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.