MD15G1251600.v1.1

TRAM domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0014389
Physical Location & Seq
Reverse (-)
21199749 .. 21203526
3778 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1251600.v1.1.491

Sequence Viewer

Length: 1893 bp
ATGGCGTCGTCGTTGTCGTCACCCCTGTCCTCGATCCTGAACCAGCCCCACTGCGCTCTGCGTCTCAAGCTCCAGAGGCCGTGCCGCTTCACTCTGAGGTTCCTCAATTGGGGACCGGAGAAGTCCAGTTTCCAATGCTACCACCACCGCCAGCAGCTGCCGCCTCAGCCGCAAAGGAGGAGTCTTGGCTGCAGTATCTCCAGAAGCTTCTCGAATTTCAGCACCAACGCTTCTCTCTCCGGCCAGTCCGGTAGCCCCAGCCTCCGCCACTTCGTCGCTCAAGCTGCTCTCGCCGGTGCTGAAGCCCAGCCTCAGAATGTGAATGAGACTGCTACTGAAGTTGCTCCAATAGGTCGTATCTATCACGAGACTTATGGGTGTCAAATGAATATTAATGACATGGAGATCGTTCTGTCTATTATGAAGAATGCTGGGTATAGTGAAGTCGTTGATGTTCCTGAGAAAGCAGAGGTTATTTTTATTAACACCTGCGCTATCAGGGACAATGCAGAACAGAAGGTGTGGCATCGGCTTAATTATTTTTGGTTTCTTAAGAGGGAATGGAAGGACAATGTTAAAATAGGGAGGTCGCAGTCCAAATGTCCTCCAAAAGTTGTAGTTTTGGGATGTATGGCGGAGAGGTTAAAGGACAAGATACTTGATTCAGACAAAATGGTTGATGTGGTTTGTGGGCCTGATGCGTACAGAGACTTGCCGAGATTATTAGAAGATGTAGACTATGGTCAAAAAGGAATCAATACTCTTCTTTCGCTGGAAGAGACTTATGCTGATATTAGTCCAGTTCGAATCTCCAAAAATTCAATTACTGCTTTTGTTTCTGTTATGAGGGGTTGCAACAATATGTGCTCATTTTGCGTTGTTCCTTTCACAAGAGGCAGAGAGCGCTCACGTCCTGTGGAATCTATTGTGAGGGAGGTGGGAGAGCTTTGGGAAGAAGGCGTGAAAGAGGTAACACTGCTAGGACAGAATGTAAACAGCTACAATGATGCCTCTGAGAATGAAAAAGAAGTGGAAACCGGAAATAATTGGAGATACAGCGAAGGCTTTTCCAGCATGTGCAAGGTGAAAAAAGTTGGTTCGCGTTTTGCTGATCTCTTGGATCGACTGTCCACAGAATATCCAGAGATGAGATTCCGATACACATCCCCACACCCTAAAGATTTCCCTGATGAGTTGCTGTATTTAATGCGAGACAGACCTAATATATGTAAAAGTATTCATTTGCCTGCACAAACTGGGAGTAGCACAGTGCTAGAAAGGATGCGTCGTGGCTATACCCGCGAGGCATACTTAGATCTTGTGCAGAAGATACGGAGAATTATTCCAGATGTGGGCATCAGCAGTGATTTCATATGTGGGTTTTGTGGGGAAACAGAGGAGGACCATGAAGACACACTTAGTCTTGTAAAGGCTGTTGGTTACGACATGGCTTACATGTTTGCATATAGCATGAGGGAGAAAACCCATGCAAATAGAAACTACGATGATGATGTTCCAGAGGATGTGAAGCAGAGGAGGCTGACTGAACTTATCGAGGCTTTCCGTAAGAGCACAGGTCAGTGTTACGACTCACAGGTGGGAACTACCCAGCTTGTCTTAGTAGAAGGACCTAATAAGAGAGCTCCAGATACAGAACTTATGGGCAAAAGTGATAGAGGTCATAGAGTTTCTTTTGCTAACGTGCCGTTAGCACATCGAGATGCTGATTCAAATGAGGAAAGGAATCCCGTAGTGGGGGATTACGTTGAAGTTCGTATATTGAAATCTACAAGAGCATCACTATTTGGAGAGGCTGTTGCAATAAGTAAATTGAGCTTGTTTTACAACAATGTGGATGAAGAAGTCGTTGCCGCCTGTGGAAGTAGAAGTTGA

Protein Analysis

631

Amino Acids

71.29

Weight (kDa)

6.5

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UPF0004 PF00919 119 - 231 8.7e-25 Uncharacterized protein family UPF0004
Radical_SAM PF04055 279 - 475 2.4e-27 Radical SAM superfamily
TRAM PF01938 531 - 606 2.9e-08 TRAM domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014389)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36390
fragaria_vesca FvH4_1g12320
malus_domestica MD02G1137900.v1.1 MD15G1251600.v1.1
prunus_persica Prupe.7G162800_v2.0.a1
pyrus_communis pycom02g10930 pycom15g22170
rosa_chinensis RchiOBHm_Chr2g0100141
rosa_laevigata RLG00000016940
rosa_multiflora Rmu_sc0018554.1_g000003
rosa_roxburghii Rroxscaffold_2G00142530
rosa_rugosa Rorug02G0086000
rosa_samantha Rh2AG134700 Rh2BG138400 Rh2CG140200 Rh2DG140400
rosa_wichuraiana Rw2G010530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 497
Acc36I ACCTGC 1 cut(s) 497
AccI GTMKAC 1 cut(s) 735
AccII CGCG 2 cut(s) 1102, 1302
AciI CCGC 8 cut(s) 85, 148, 161, 170, 265, 635, 1300, 1872
AclWI GGATC 2 cut(s) 28, 1128
AcoI YGGCCR 1 cut(s) 241
AcsI RAATTY 2 cut(s) 214, 817
AcuI CTGAAG 2 cut(s) 321, 357
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 704
AfeI AGCGCT 1 cut(s) 905
AfiI CCNNNNNNNGG 4 cut(s) 109, 1352, 1754, 1755
AflII CTTAAG 1 cut(s) 551
AflIII ACRYGT 1 cut(s) 1455
AgsI TTSAA 4 cut(s) 822, 1731, 1769, 1783
AjiI CACGTC 1 cut(s) 911
AluBI AGCT 9 cut(s) 70, 157, 207, 284, 946, 999, 1612, 1643, 1836
AluI AGCT 9 cut(s) 70, 157, 207, 284, 946, 999, 1612, 1643, 1836
Alw21I GWGCWC 3 cut(s) 869, 1574, 1645
Alw26I GTCTC 6 cut(s) 68, 320, 362, 702, 773, 1206
AlwI GGATC 2 cut(s) 28, 1128
AlwNI CAGNNNCTG 1 cut(s) 157
Aor51HI AGCGCT 1 cut(s) 905
AoxI GGCC 3 cut(s) 77, 241, 692
ApeKI GCWGC 4 cut(s) 154, 157, 189, 284
ApoI RAATTY 2 cut(s) 214, 817
ArsI GACNNNNNNTTYG 2 cut(s) 166, 198
AseI ATTAAT 1 cut(s) 393
AspLEI GCGC 3 cut(s) 56, 494, 906
AspS9I GGNCC 4 cut(s) 113, 692, 1402, 1628
AsuHPI GGTGA 2 cut(s) 12, 1096
AsuII TTCGAA 1 cut(s) 805
AvaII GGWCC 3 cut(s) 113, 1402, 1628
BanII GRGCYC 1 cut(s) 1645
BauI CACGAG 1 cut(s) 365
BbsI GAAGAC 1 cut(s) 1416
Bbv12I GWGCWC 3 cut(s) 869, 1574, 1645
BbvCI CCTCAGC 1 cut(s) 165
BbvI GCAGC 4 cut(s) 144, 166, 176, 271
BceAI ACGGC 2 cut(s) 64, 1690
BcoDI GTCTC 6 cut(s) 68, 320, 362, 702, 773, 1206
BfaI CTAG 2 cut(s) 980, 1274
BfmI CTRYAG 1 cut(s) 190
BfoI RGCGCY 1 cut(s) 907
BfrI CTTAAG 1 cut(s) 551
BfuAI ACCTGC 1 cut(s) 497
BglII AGATCT 1 cut(s) 1315
BisI GCNGC 8 cut(s) 85, 155, 158, 161, 170, 190, 285, 1872
BlsI GCNGC 8 cut(s) 86, 156, 159, 162, 171, 191, 286, 1873
Bme18I GGWCC 3 cut(s) 113, 1402, 1628
BmgBI CACGTC 1 cut(s) 911
BmgT120I GGNCC 4 cut(s) 113, 692, 1402, 1628
BmiI GGNNCC 2 cut(s) 101, 114
BmrI ACTGGG 1 cut(s) 1266
BmsI GCATC 7 cut(s) 535, 688, 997, 1272, 1365, 1711, 1805
BmuI ACTGGG 1 cut(s) 1266
BoxI GACNNNNGTC 1 cut(s) 741
BpiI GAAGAC 1 cut(s) 1416
BpmI CTGGAG 3 cut(s) 56, 184, 1629
Bpu10I CCTNAGC 1 cut(s) 165
Bpu14I TTCGAA 1 cut(s) 805
BpuEI CTTGAG 2 cut(s) 50, 264
BsaBI GATNNNNATC 1 cut(s) 1162
BsaHI GRCGYC 1 cut(s) 5
BsaWI WCCGGW 3 cut(s) 115, 248, 1037
BsaXI ACNNNNNCTCC 2 cut(s) 1800, 1830
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 1352, 1754, 1755
Bse118I RCCGGY 1 cut(s) 293
Bse1I ACTGG 4 cut(s) 126, 244, 800, 1261
Bse8I GATNNNNATC 1 cut(s) 1162
BseGI GGATG 5 cut(s) 632, 1163, 1287, 1528, 1861
BseJI GATNNNNATC 1 cut(s) 1162
BseLI CCNNNNNNNGG 4 cut(s) 109, 1352, 1754, 1755
BseMII CTCAG 5 cut(s) 86, 179, 326, 450, 1005
BseNI ACTGG 4 cut(s) 126, 244, 800, 1261
BseRI GAGGAG 3 cut(s) 193, 1412, 1549
BseXI GCAGC 4 cut(s) 144, 166, 176, 271
BseYI CCCAGC 4 cut(s) 257, 306, 431, 1608
BsgI GTGCAG 2 cut(s) 1233, 1343
Bsh1236I CGCG 2 cut(s) 1102, 1302
BshFI GGCC 3 cut(s) 79, 243, 694
BsiHKAI GWGCWC 3 cut(s) 869, 1574, 1645
BsiSI CCGG 5 cut(s) 116, 240, 249, 294, 1038
BslFI GGGAC 2 cut(s) 126, 515
BslI CCNNNNNNNGG 4 cut(s) 109, 1352, 1754, 1755
BsmAI GTCTC 6 cut(s) 68, 320, 362, 702, 773, 1206
BsmBI CGTCTC 1 cut(s) 68
BsmFI GGGAC 2 cut(s) 126, 515
BsmI GAATGC 1 cut(s) 433
BsnI GGCC 3 cut(s) 79, 243, 694
Bsp119I TTCGAA 1 cut(s) 805
Bsp1286I GDGCHC 3 cut(s) 869, 1574, 1645
Bsp143I GATC 5 cut(s) 33, 405, 1111, 1120, 1315
BspACI CCGC 8 cut(s) 85, 148, 161, 170, 265, 635, 1300, 1872
BspANI GGCC 3 cut(s) 79, 243, 694
BspCNI CTCAG 5 cut(s) 87, 178, 325, 451, 1006
BspFNI CGCG 2 cut(s) 1102, 1302
BspLI GGNNCC 2 cut(s) 101, 114
BspMAI CTGCAG 1 cut(s) 194
BspMI ACCTGC 1 cut(s) 497
BspPI GGATC 2 cut(s) 28, 1128
BspT104I TTCGAA 1 cut(s) 805
BspTI CTTAAG 1 cut(s) 551
BsrFI RCCGGY 1 cut(s) 293
BsrI ACTGG 4 cut(s) 126, 244, 800, 1261
BssAI RCCGGY 1 cut(s) 293
BssMI GATC 5 cut(s) 33, 405, 1111, 1120, 1315
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 365
Bst2BI CACGAG 1 cut(s) 365
Bst4CI ACNGT 2 cut(s) 1128, 1270
Bst6I CTCTTC 2 cut(s) 768, 771
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 551
BstBI TTCGAA 1 cut(s) 805
BstC8I GCNNGC 2 cut(s) 152, 1248
BstDEI CTNAG 8 cut(s) 95, 165, 312, 459, 1014, 1312, 1418, 1618
BstF5I GGATG 5 cut(s) 632, 1163, 1287, 1528, 1861
BstFNI CGCG 2 cut(s) 1102, 1302
BstH2I RGCGCY 1 cut(s) 907
BstHHI GCGC 3 cut(s) 56, 494, 906
BstKTI GATC 5 cut(s) 36, 408, 1114, 1123, 1318
BstMAI GTCTC 6 cut(s) 68, 320, 362, 702, 773, 1206
BstMBI GATC 5 cut(s) 33, 405, 1111, 1120, 1315
BstNSI RCATGY 2 cut(s) 1078, 1459
BstPAI GACNNNNGTC 1 cut(s) 741
BstSFI CTRYAG 1 cut(s) 190
BstUI CGCG 2 cut(s) 1102, 1302
BstV1I GCAGC 4 cut(s) 144, 166, 176, 271
BstV2I GAAGAC 1 cut(s) 1416
BstX2I RGATCY 1 cut(s) 1315
BstYI RGATCY 1 cut(s) 1315
BsuRI GGCC 3 cut(s) 79, 243, 694
BtrI CACGTC 1 cut(s) 911
BtsCI GGATG 5 cut(s) 632, 1163, 1287, 1528, 1861
BtsI GCAGTG 3 cut(s) 49, 974, 1369
BtsIMutI CAGTG 5 cut(s) 49, 974, 1275, 1369, 1586
BveI ACCTGC 1 cut(s) 497
Cac8I GCNNGC 2 cut(s) 152, 1248
CaiI CAGNNNCTG 1 cut(s) 157
CfoI GCGC 3 cut(s) 56, 494, 906
Cfr10I RCCGGY 1 cut(s) 293
Cfr13I GGNCC 4 cut(s) 113, 692, 1402, 1628
CseI GACGC 2 cut(s) 50, 1274
Csp6I GTAC 1 cut(s) 703
CviAII CATG 7 cut(s) 400, 1075, 1406, 1447, 1456, 1471, 1487
CviQI GTAC 1 cut(s) 703
DdeI CTNAG 8 cut(s) 95, 165, 312, 459, 1014, 1312, 1418, 1618
DpnI GATC 5 cut(s) 35, 407, 1113, 1122, 1317
DpnII GATC 5 cut(s) 33, 405, 1111, 1120, 1315
EaeI YGGCCR 1 cut(s) 241
Eam1104I CTCTTC 2 cut(s) 768, 771
EarI CTCTTC 2 cut(s) 768, 771
EciI GGCGGA 2 cut(s) 254, 650
Ecl136II GAGCTC 1 cut(s) 1643
Eco24I GRGCYC 1 cut(s) 1645
Eco47I GGWCC 3 cut(s) 113, 1402, 1628
Eco47III AGCGCT 1 cut(s) 905
Eco53kI GAGCTC 1 cut(s) 1643
Eco57I CTGAAG 2 cut(s) 321, 357
EcoICRI GAGCTC 1 cut(s) 1643
EcoO109I RGGNCCY 1 cut(s) 1628
EcoT38I GRGCYC 1 cut(s) 1645
Esp3I CGTCTC 1 cut(s) 68
FaeI CATG 7 cut(s) 403, 1078, 1409, 1450, 1459, 1474, 1490
FalI AAGNNNNNCTT 2 cut(s) 1401, 1433
FaqI GGGAC 2 cut(s) 126, 515
FatI CATG 7 cut(s) 399, 1074, 1405, 1446, 1455, 1470, 1486
FauI CCCGC 1 cut(s) 1307
FauNDI CATATG 1 cut(s) 1373
FblI GTMKAC 1 cut(s) 735
Fnu4HI GCNGC 8 cut(s) 85, 155, 158, 161, 170, 190, 285, 1872
FokI GGATG 5 cut(s) 639, 1150, 1294, 1535, 1868
FriOI GRGCYC 1 cut(s) 1645
Fsp4HI GCNGC 8 cut(s) 85, 155, 158, 161, 170, 190, 285, 1872
FspBI CTAG 2 cut(s) 980, 1274
GlaI GCGC 3 cut(s) 55, 493, 905
GluI GCNGC 8 cut(s) 85, 155, 158, 161, 170, 190, 285, 1872
GsaI CCCAGC 4 cut(s) 261, 310, 435, 1612
GsuI CTGGAG 3 cut(s) 56, 184, 1629
HaeII RGCGCY 1 cut(s) 907
HaeIII GGCC 3 cut(s) 79, 243, 694
HapII CCGG 5 cut(s) 116, 240, 249, 294, 1038
HgaI GACGC 2 cut(s) 50, 1274
HhaI GCGC 3 cut(s) 56, 494, 906
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 7 cut(s) 403, 1078, 1409, 1450, 1459, 1474, 1490
Hin6I GCGC 3 cut(s) 54, 492, 904
HinP1I GCGC 3 cut(s) 54, 492, 904
HindIII AAGCTT 1 cut(s) 205
HinfI GANTC 9 cut(s) 181, 662, 753, 807, 920, 1152, 1589, 1727, 1744
HpaII CCGG 5 cut(s) 116, 240, 249, 294, 1038
HphI GGTGA 2 cut(s) 12, 1096
Hpy166II GTNNAC 3 cut(s) 736, 994, 1131
Hpy188I TCNGA 5 cut(s) 96, 315, 667, 1015, 1157
Hpy8I GTNNAC 3 cut(s) 736, 994, 1131
Hpy99I CGWCG 4 cut(s) 10, 13, 278, 1290
HpyAV CCTTC 5 cut(s) 511, 559, 950, 1055, 1619
HpyCH4III ACNGT 2 cut(s) 1128, 1270
HpyCH4IV ACGT 3 cut(s) 910, 1701, 1764
HpyCH4V TGCA 9 cut(s) 192, 509, 855, 1080, 1250, 1324, 1463, 1490, 1820
HpyF3I CTNAG 8 cut(s) 95, 165, 312, 459, 1014, 1312, 1418, 1618
HpySE526I ACGT 3 cut(s) 910, 1701, 1764
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 7 cut(s) 403, 1078, 1409, 1450, 1459, 1474, 1490
HspAI GCGC 3 cut(s) 54, 492, 904
Kzo9I GATC 5 cut(s) 33, 405, 1111, 1120, 1315
LmnI GCTCC 3 cut(s) 75, 349, 1648
Lsp1109I GCAGC 4 cut(s) 144, 166, 176, 271
LweI GCATC 7 cut(s) 535, 688, 997, 1272, 1365, 1711, 1805
MaeI CTAG 2 cut(s) 980, 1274
MaeII ACGT 3 cut(s) 910, 1701, 1764
MaeIII GTNAC 4 cut(s) 18, 970, 1439, 1583
MalI GATC 5 cut(s) 35, 407, 1113, 1122, 1317
MboI GATC 5 cut(s) 33, 405, 1111, 1120, 1315
MboII GAAGA 8 cut(s) 436, 740, 755, 788, 965, 1339, 1421, 1871
MfeI CAATTG 1 cut(s) 106
MflI RGATCY 1 cut(s) 1315
MhlI GDGCHC 3 cut(s) 869, 1574, 1645
MluCI AATT 8 cut(s) 106, 214, 535, 817, 822, 1045, 1338, 1829
MlyI GAGTC 2 cut(s) 190, 1583
MseI TTAA 7 cut(s) 393, 483, 534, 552, 576, 644, 1205
MslI CAYNNNNRTG 1 cut(s) 1719
MspA1I CMGCKG 1 cut(s) 157
MspCI CTTAAG 1 cut(s) 551
MspI CCGG 5 cut(s) 116, 240, 249, 294, 1038
MunI CAATTG 1 cut(s) 106
Mva1269I GAATGC 1 cut(s) 433
MvnI CGCG 2 cut(s) 1102, 1302
NdeI CATATG 1 cut(s) 1373
NdeII GATC 5 cut(s) 33, 405, 1111, 1120, 1315
NlaIII CATG 7 cut(s) 403, 1078, 1409, 1450, 1459, 1474, 1490
NlaIV GGNNCC 2 cut(s) 101, 114
NmeAIII GCCGAG 1 cut(s) 741
NmuCI GTSAC 1 cut(s) 18
NspI RCATGY 2 cut(s) 1078, 1459
NspV TTCGAA 1 cut(s) 805
PaqCI CACCTGC 1 cut(s) 497
PciI ACATGT 1 cut(s) 1455
PcsI WCGNNNNNNNCGW 1 cut(s) 14
PctI GAATGC 1 cut(s) 433
PfeI GAWTC 7 cut(s) 662, 753, 807, 920, 1152, 1727, 1744
PkrI GCNGC 8 cut(s) 86, 156, 159, 162, 171, 191, 286, 1873
PleI GAGTC 2 cut(s) 189, 1583
PpsI GAGTC 2 cut(s) 189, 1583
PpuMI RGGWCCY 1 cut(s) 1628
PscI ACATGT 1 cut(s) 1455
PshAI GACNNNNGTC 1 cut(s) 741
PshBI ATTAAT 1 cut(s) 393
Psp124BI GAGCTC 1 cut(s) 1645
Psp5II RGGWCCY 1 cut(s) 1628
PspFI CCCAGC 4 cut(s) 257, 306, 431, 1608
PspN4I GGNNCC 2 cut(s) 101, 114
PspPI GGNCC 4 cut(s) 113, 692, 1402, 1628
PspPPI RGGWCCY 1 cut(s) 1628
PstI CTGCAG 1 cut(s) 194
PstNI CAGNNNCTG 1 cut(s) 157
PsuI RGATCY 1 cut(s) 1315
PvuII CAGCTG 1 cut(s) 157
RsaI GTAC 1 cut(s) 704
RsaNI GTAC 1 cut(s) 703
RseI CAYNNNNRTG 1 cut(s) 1719
SacI GAGCTC 1 cut(s) 1645
SaqAI TTAA 7 cut(s) 393, 483, 534, 552, 576, 644, 1205
SatI GCNGC 8 cut(s) 85, 155, 158, 161, 170, 190, 285, 1872
Sau3AI GATC 5 cut(s) 33, 405, 1111, 1120, 1315
Sau96I GGNCC 4 cut(s) 113, 692, 1402, 1628
SchI GAGTC 2 cut(s) 190, 1583
SduI GDGCHC 3 cut(s) 869, 1574, 1645
SfaNI GCATC 7 cut(s) 535, 688, 997, 1272, 1365, 1711, 1805
SfcI CTRYAG 1 cut(s) 190
SfuI TTCGAA 1 cut(s) 805
SgrAI CRCCGGYG 1 cut(s) 293
SinI GGWCC 3 cut(s) 113, 1402, 1628
SmiMI CAYNNNNRTG 1 cut(s) 1719
SmlI CTYRAG 3 cut(s) 65, 279, 551
SmoI CTYRAG 3 cut(s) 65, 279, 551
Sse9I AATT 8 cut(s) 106, 214, 535, 817, 822, 1045, 1338, 1829
SsiI CCGC 8 cut(s) 85, 148, 161, 170, 265, 635, 1300, 1872
SspI AATATT 1 cut(s) 391
SspMI CTAG 2 cut(s) 980, 1274
SstI GAGCTC 1 cut(s) 1645
TaaI ACNGT 2 cut(s) 1128, 1270
TaiI ACGT 3 cut(s) 913, 1704, 1767
TaqI TCGA 6 cut(s) 32, 212, 805, 1123, 1554, 1717
TasI AATT 8 cut(s) 106, 214, 535, 817, 822, 1045, 1338, 1829
TauI GCSGC 4 cut(s) 87, 163, 172, 1874
TfiI GAWTC 7 cut(s) 662, 753, 807, 920, 1152, 1727, 1744
Tru1I TTAA 7 cut(s) 393, 483, 534, 552, 576, 644, 1205
Tru9I TTAA 7 cut(s) 393, 483, 534, 552, 576, 644, 1205
TscAI CASTG 5 cut(s) 56, 981, 1275, 1369, 1586
TseFI GTSAC 1 cut(s) 18
TseI GCWGC 4 cut(s) 154, 157, 189, 284
Tsp45I GTSAC 1 cut(s) 18
TspDTI ATGAA 7 cut(s) 401, 437, 1035, 1229, 1360, 1422, 1872
TspGWI ACGGA 2 cut(s) 1348, 1553
TspRI CASTG 5 cut(s) 56, 981, 1275, 1369, 1586
Vha464I CTTAAG 1 cut(s) 551
VpaK11BI GGWCC 3 cut(s) 113, 1402, 1628
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 2 cut(s) 214, 817
XceI RCATGY 2 cut(s) 1078, 1459
XmiI GTMKAC 1 cut(s) 735
XspI CTAG 2 cut(s) 980, 1274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.