Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0014389

Physical Location & Seq

Genomic Coordinates Forward (+)

12389986 .. 12393634

Gene Structure 3649 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG140200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGCGACCTCGCTCTCGTCTCTGTCCTCGATTTTGAACCAACCTCACTGCGCTCTCCGCCTGAAGCTCCAGAAGCCATGTCGTTTTGCTCTCCGGTTTCTGAATTGGAAACCGGAAGAAGCTTCCGGAATCCGATGCTACTACCATCGGCAGCGGACCACTACTCGGCTGCAAAGGAGGAGTCTTGGCTCCAGAAGCTTCTCTCAGTCGAGCTCTTCTCTTCCGAACCACTCCGACGGCCCCAGCCTCCGCCACTTCGTCGCCCAGGCCGCCGCTCTCACCGCTTCCGAGGCCCAGGCCCTGAATGTGGTAGCTCCTGAAGGTCCTCCGATAGGCCGCATCTATCATGAGACTTACGGGTGTCAGATGAATATTAATGACATGGAGATTGTCCTGTCTATTATGAAGGAGGCTGGATATAGTGAAGTTGTGGATGTTCCTGAGAATGCAGAGGTCATTTTCATTAATACCTGTGCTATCAGGGACAATGCAGAACAGAAGGTGTGGCAACGGCTTAATTACTTCTGGTTTCTTAAGAGGCACTGGAAGAGCAATGTTAAGATAGGGAGGTCGCAATCCACACGCCCTCCGAAAGTTGTGGTTTTGGGATGTATGGCCGAGAGGTTAAAGGACAAGATACTAGATGCAGACAAAATGGTCGATGTGGTCTGTGGGCCTGATGCGTACAGGGACTTGCCACGGTTACTGCAAGATGTGGACTATGGTCAGAAAGGGATCAATACTCTTCTTTCACTGGAAGAGACTTACGCTGATATTAGTCCAGTTCGAATCTCCAAAAATTCAATCAGTGCTTTCGTTTCTGTTATGAGGGGTTGCAACAATATGTGCTCTTTTTGCATTGTTCCTTTCACAAGAGGCAGAGAGCGTTCACGTCCTGTGGAGTCAATTGTCAGGGAGGTGGGAGAGCTTTGGCAAGAAGGTGTGAAAGAGGTGACACTGCTAGGCCAGAATGTAAATAGCTATAATGATGCCTCTGAGTATGAAAAGGAAGCTGAAGCAGGAACTAATTGGAACTACAGTGAAGGATTTTCCAGCTTGTGTAAGGTGAAAAAAGTAGGTTCACGTTTTGCTGATCTCTTGGACCGACTTTCCACAGAATTTCCAGAGATGAGATTCAGATACACATCCCCCCACCCTAAAGATTTCCCTGATGAGTTACTCTATATAATGCGAGACAGACATAATATTTGCAACTCTATCCATTTGCCTGCTCAAAGTGGTAGTAGCAGAGTTATAGAAAGAATGCGTCGGGGCTATACCCGGGAGGCATACTTAGATCTCGTGCAAAAGATAAGGAGGATTATTCCAGATGTCGGCATCAGTAGTGATTTCATATGTGGATTTTGTGGGGAGACTGAGGAGGACCATGAAGAGACAATAAGCCTTGTAAAGGCTGTGGGTTATGATATGGCTTACATGTTTGCATATAGCATGAGAGATAAAACCCATGCAAATAGAAACTATGATGATGATGTTCTGGAGAAAGTGAAGCAGAGGAGGCTGACTGAACTTATTGAAGCTTTCCGTGAGAGCACAGGCCAGTGTTATGACTCACAAGTGGGAACTACCCAACTTGTATTAGTAGAAGGACCTAATAAGAGAGCTCCGGATACAGAACTCATTGGCAAGAGTGACAGAGGTCATAGAGTTTCTTTCATCAATGTGCCATTACCAGATCGAGATGCTGATTCAAATGAGGAACGGAATCCCAAAGTGGGTGATTATGTTGAAGTCCGTATTCAGAAGTCTACAAGAGCGTCACTCTATGGAGAGGCAATTGCTATAAGCAAATTGAGTTCTTTTTATAACATCGTGAATGAAGAAGCTCTTGCTTGTGCAAGTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000079 GO:0001932 GO:0008150 GO:0019220 GO:0019222 GO:0031323 GO:0031399 GO:0032268 GO:0042325 GO:0043549 GO:0045859 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051338 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071900 GO:0080090 GO:1904029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Radical_SAM TRAM UPF0004

Protein Analysis

622

Amino Acids

70.56

Weight (kDa)

7.15

Isoelectric Point (pI)

44.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UPF0004	PF00919	113 - 225	4.4e-25	Uncharacterized protein family UPF0004
Radical_SAM	PF04055	273 - 469	3.5e-27	Radical SAM superfamily
TRAM	PF01938	525 - 600	4.4e-09	TRAM domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014389)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36390
fragaria_vesca	FvH4_1g12320
malus_domestica	MD02G1137900.v1.1 MD15G1251600.v1.1
prunus_persica	Prupe.7G162800_v2.0.a1
pyrus_communis	pycom02g10930 pycom15g22170
rosa_chinensis	RchiOBHm_Chr2g0100141
rosa_laevigata	RLG00000016940
rosa_multiflora	Rmu_sc0018554.1_g000003
rosa_roxburghii	Rroxscaffold_2G00142530
rosa_rugosa	Rorug02G0086000
rosa_samantha	Rh2AG134700 Rh2BG138400 Rh2CG140200 Rh2DG140400
rosa_wichuraiana	Rw2G010530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1827
AasI	GACNNNNNNGTC	1 cut(s)	656
AccBSI	CCGCTC	1 cut(s)	275
AccI	GTMKAC	1 cut(s)	1769
AccIII	TCCGGA	2 cut(s)	125, 1627
AciI	CCGC	7 cut(s)	58, 154, 250, 270, 273, 282, 337
AclWI	GGATC	1 cut(s)	743
AcoI	YGGCCR	1 cut(s)	615
AcsI	RAATTY	2 cut(s)	799, 1118
AcuI	CTGAAG	3 cut(s)	83, 339, 1035
AfaI	GTAC	1 cut(s)	686
AfiI	CCNNNNNNNGG	6 cut(s)	165, 307, 332, 1334, 1411, 1736
AflII	CTTAAG	1 cut(s)	533
AflIII	ACRYGT	1 cut(s)	1437
AgsI	TTSAA	5 cut(s)	37, 804, 1538, 1713, 1751
AjiI	CACGTC	1 cut(s)	893
AjnI	CCWGG	2 cut(s)	264, 294
Alw21I	GWGCWC	4 cut(s)	215, 851, 1556, 1627
Alw26I	GTCTC	6 cut(s)	24, 344, 755, 1188, 1367, 1388
AlwI	GGATC	1 cut(s)	743
AlwNI	CAGNNNCTG	1 cut(s)	301
Ama87I	CYCGRG	1 cut(s)	1281
Aor13HI	TCCGGA	2 cut(s)	125, 1627
AoxI	GGCC	9 cut(s)	238, 267, 291, 297, 334, 615, 674, 964, 1558
ApeKI	GCWGC	2 cut(s)	151, 169
ApoI	RAATTY	2 cut(s)	799, 1118
ArsI	GACNNNNNNTTYG	4 cut(s)	166, 198, 1191, 1223
AseI	ATTAAT	2 cut(s)	375, 465
AspLEI	GCGC	1 cut(s)	53
AspS9I	GGNCC	9 cut(s)	156, 239, 292, 298, 323, 674, 1102, 1384, 1610
AsuC2I	CCSGG	2 cut(s)	1282, 1283
AsuHPI	GGTGA	4 cut(s)	271, 964, 1078, 1751
AsuII	TTCGAA	1 cut(s)	787
AvaI	CYCGRG	1 cut(s)	1281
AvaII	GGWCC	5 cut(s)	156, 323, 1102, 1384, 1610
BanII	GRGCYC	2 cut(s)	215, 1627
BauI	CACGAG	1 cut(s)	1301
Bbv12I	GWGCWC	4 cut(s)	215, 851, 1556, 1627
BbvI	GCAGC	2 cut(s)	156, 163
BccI	CCATC	1 cut(s)	153
BceAI	ACGGC	2 cut(s)	253, 527
BciT130I	CCWGG	2 cut(s)	266, 296
BciVI	GTATCC	1 cut(s)	1624
BcnI	CCSGG	2 cut(s)	1282, 1283
BcoDI	GTCTC	6 cut(s)	24, 344, 755, 1188, 1367, 1388
BfaI	CTAG	2 cut(s)	641, 962
BfmI	CTRYAG	1 cut(s)	1036
BfrI	CTTAAG	1 cut(s)	533
BfuI	GTATCC	1 cut(s)	1624
BglII	AGATCT	1 cut(s)	1297
BisI	GCNGC	5 cut(s)	152, 170, 270, 273, 337
BlsI	GCNGC	5 cut(s)	153, 171, 271, 274, 338
Bme1390I	CCNGG	4 cut(s)	266, 296, 1282, 1283
Bme18I	GGWCC	5 cut(s)	156, 323, 1102, 1384, 1610
BmeT110I	CYCGRG	1 cut(s)	1281
BmgBI	CACGTC	1 cut(s)	893
BmgT120I	GGNCC	9 cut(s)	156, 239, 292, 298, 323, 674, 1102, 1384, 1610
BmiI	GGNNCC	2 cut(s)	190, 241
BmrFI	CCNGG	4 cut(s)	266, 296, 1282, 1283
BmsI	GCATC	7 cut(s)	125, 348, 634, 670, 979, 1347, 1693
BoxI	GACNNNNGTC	2 cut(s)	723, 1659
BplI	GAGNNNNNCTC	4 cut(s)	202, 234, 1767, 1799
BpmI	CTGGAG	3 cut(s)	53, 175, 1520
Bpu14I	TTCGAA	1 cut(s)	787
BpuMI	CCSGG	2 cut(s)	1282, 1283
BsaBI	GATNNNNATC	1 cut(s)	1144
BsaJI	CCNNGG	5 cut(s)	264, 288, 294, 698, 1281
BsaWI	WCCGGW	4 cut(s)	93, 112, 125, 1627
BsaXI	ACNNNNNCTCC	2 cut(s)	571, 601
Bsc4I	CCNNNNNNNGG	6 cut(s)	165, 307, 332, 1334, 1411, 1736
Bse1I	ACTGG	4 cut(s)	548, 759, 782, 1561
Bse3DI	GCAATG	1 cut(s)	559
Bse8I	GATNNNNATC	1 cut(s)	1144
BseAI	TCCGGA	2 cut(s)	125, 1627
BseBI	CCWGG	2 cut(s)	266, 296
BseDI	CCNNGG	5 cut(s)	264, 288, 294, 698, 1281
BseGI	GGATG	3 cut(s)	439, 614, 1145
BseJI	GATNNNNATC	1 cut(s)	1144
BseLI	CCNNNNNNNGG	6 cut(s)	165, 307, 332, 1334, 1411, 1736
BseMI	GCAATG	1 cut(s)	559
BseMII	CTCAG	4 cut(s)	218, 432, 987, 1368
BseNI	ACTGG	4 cut(s)	548, 759, 782, 1561
BseRI	GAGGAG	3 cut(s)	193, 1394, 1531
BseXI	GCAGC	2 cut(s)	156, 163
BseYI	CCCAGC	1 cut(s)	242
BshFI	GGCC	9 cut(s)	240, 269, 293, 299, 336, 617, 676, 966, 1560
BsiHKAI	GWGCWC	4 cut(s)	215, 851, 1556, 1627
BsiHKCI	CYCGRG	1 cut(s)	1281
BsiSI	CCGG	5 cut(s)	94, 113, 126, 1282, 1628
BslFI	GGGAC	2 cut(s)	497, 704
BslI	CCNNNNNNNGG	6 cut(s)	165, 307, 332, 1334, 1411, 1736
BsmAI	GTCTC	6 cut(s)	24, 344, 755, 1188, 1367, 1388
BsmBI	CGTCTC	1 cut(s)	24
BsmFI	GGGAC	2 cut(s)	497, 704
BsmI	GAATGC	2 cut(s)	451, 1269
BsnI	GGCC	9 cut(s)	240, 269, 293, 299, 336, 617, 676, 966, 1560
BsoBI	CYCGRG	1 cut(s)	1281
Bsp119I	TTCGAA	1 cut(s)	787
Bsp1286I	GDGCHC	4 cut(s)	215, 851, 1556, 1627
Bsp13I	TCCGGA	2 cut(s)	125, 1627
Bsp143I	GATC	4 cut(s)	735, 1093, 1297, 1696
BspACI	CCGC	7 cut(s)	58, 154, 250, 270, 273, 282, 337
BspANI	GGCC	9 cut(s)	240, 269, 293, 299, 336, 617, 676, 966, 1560
BspCNI	CTCAG	4 cut(s)	217, 433, 988, 1369
BspEI	TCCGGA	2 cut(s)	125, 1627
BspHI	TCATGA	1 cut(s)	346
BspLI	GGNNCC	2 cut(s)	190, 241
BspPI	GGATC	1 cut(s)	743
BspQI	GCTCTTC	2 cut(s)	220, 542
BspT104I	TTCGAA	1 cut(s)	787
BspTI	CTTAAG	1 cut(s)	533
BsrBI	CCGCTC	1 cut(s)	275
BsrDI	GCAATG	1 cut(s)	559
BsrI	ACTGG	4 cut(s)	548, 759, 782, 1561
BssECI	CCNNGG	5 cut(s)	264, 288, 294, 698, 1281
BssMI	GATC	4 cut(s)	735, 1093, 1297, 1696
BssSI	CACGAG	1 cut(s)	1301
Bst2BI	CACGAG	1 cut(s)	1301
Bst2UI	CCWGG	2 cut(s)	266, 296
Bst4CI	ACNGT	2 cut(s)	702, 1040
Bst6I	CTCTTC	6 cut(s)	220, 225, 542, 750, 753, 1386
BstAFI	CTTAAG	1 cut(s)	533
BstBI	TTCGAA	1 cut(s)	787
BstC8I	GCNNGC	1 cut(s)	1230
BstDEI	CTNAG	5 cut(s)	204, 441, 996, 1294, 1377
BstDSI	CCRYGG	1 cut(s)	698
BstENI	CCTNNNNNAGG	2 cut(s)	330, 1409
BstF5I	GGATG	3 cut(s)	439, 614, 1145
BstHHI	GCGC	1 cut(s)	53
BstKTI	GATC	4 cut(s)	738, 1096, 1300, 1699
BstMAI	GTCTC	6 cut(s)	24, 344, 755, 1188, 1367, 1388
BstMBI	GATC	4 cut(s)	735, 1093, 1297, 1696
BstMWI	GCNNNNNNNGC	8 cut(s)	57, 73, 195, 269, 281, 290, 855, 1519
BstNI	CCWGG	2 cut(s)	266, 296
BstNSI	RCATGY	1 cut(s)	1441
BstPAI	GACNNNNGTC	2 cut(s)	723, 1659
BstSCI	CCNGG	4 cut(s)	264, 294, 1280, 1281
BstSFI	CTRYAG	1 cut(s)	1036
BstV1I	GCAGC	2 cut(s)	156, 163
BstX2I	RGATCY	1 cut(s)	1297
BstYI	RGATCY	1 cut(s)	1297
BsuI	GTATCC	1 cut(s)	1624
BsuRI	GGCC	9 cut(s)	240, 269, 293, 299, 336, 617, 676, 966, 1560
BtgI	CCRYGG	1 cut(s)	698
BtrI	CACGTC	1 cut(s)	893
BtsCI	GGATG	3 cut(s)	439, 614, 1145
BtsI	GCAGTG	2 cut(s)	46, 956
BtsIMutI	CAGTG	7 cut(s)	46, 541, 752, 814, 956, 1045, 1568
Cac8I	GCNNGC	1 cut(s)	1230
CaiI	CAGNNNCTG	1 cut(s)	301
CciI	TCATGA	1 cut(s)	346
CfoI	GCGC	1 cut(s)	53
Cfr13I	GGNCC	9 cut(s)	156, 239, 292, 298, 323, 674, 1102, 1384, 1610
Cfr9I	CCCGGG	1 cut(s)	1281
CseI	GACGC	2 cut(s)	1256, 1767
Csp6I	GTAC	1 cut(s)	685
CviAII	CATG	7 cut(s)	78, 347, 382, 1388, 1438, 1453, 1469
CviQI	GTAC	1 cut(s)	685
DdeI	CTNAG	5 cut(s)	204, 441, 996, 1294, 1377
DpnI	GATC	4 cut(s)	737, 1095, 1299, 1698
DpnII	GATC	4 cut(s)	735, 1093, 1297, 1696
DrdI	GACNNNNNNGTC	1 cut(s)	656
DseDI	GACNNNNNNGTC	1 cut(s)	656
EaeI	YGGCCR	1 cut(s)	615
Eam1104I	CTCTTC	6 cut(s)	220, 225, 542, 750, 753, 1386
EarI	CTCTTC	6 cut(s)	220, 225, 542, 750, 753, 1386
EciI	GGCGGA	2 cut(s)	47, 239
Ecl136II	GAGCTC	2 cut(s)	213, 1625
Eco24I	GRGCYC	2 cut(s)	215, 1627
Eco47I	GGWCC	5 cut(s)	156, 323, 1102, 1384, 1610
Eco53kI	GAGCTC	2 cut(s)	213, 1625
Eco57I	CTGAAG	3 cut(s)	83, 339, 1035
Eco88I	CYCGRG	1 cut(s)	1281
EcoICRI	GAGCTC	2 cut(s)	213, 1625
EcoNI	CCTNNNNNAGG	2 cut(s)	330, 1409
EcoO109I	RGGNCCY	3 cut(s)	298, 323, 1610
EcoRII	CCWGG	2 cut(s)	264, 294
EcoT38I	GRGCYC	2 cut(s)	215, 1627
Esp3I	CGTCTC	1 cut(s)	24
FaeI	CATG	7 cut(s)	81, 350, 385, 1391, 1441, 1456, 1472
FalI	AAGNNNNNCTT	2 cut(s)	1833, 1865
FaqI	GGGAC	2 cut(s)	497, 704
FatI	CATG	7 cut(s)	77, 346, 381, 1387, 1437, 1452, 1468
FauNDI	CATATG	1 cut(s)	1355
FblI	GTMKAC	1 cut(s)	1769
Fnu4HI	GCNGC	5 cut(s)	152, 170, 270, 273, 337
FokI	GGATG	3 cut(s)	446, 621, 1132
FriOI	GRGCYC	2 cut(s)	215, 1627
Fsp4HI	GCNGC	5 cut(s)	152, 170, 270, 273, 337
FspBI	CTAG	2 cut(s)	641, 962
GlaI	GCGC	1 cut(s)	52
GluI	GCNGC	5 cut(s)	152, 170, 270, 273, 337
GsaI	CCCAGC	1 cut(s)	246
GsuI	CTGGAG	3 cut(s)	53, 175, 1520
HaeIII	GGCC	9 cut(s)	240, 269, 293, 299, 336, 617, 676, 966, 1560
HapII	CCGG	5 cut(s)	94, 113, 126, 1282, 1628
HgaI	GACGC	2 cut(s)	1256, 1767
HhaI	GCGC	1 cut(s)	53
Hin1II	CATG	7 cut(s)	81, 350, 385, 1391, 1441, 1456, 1472
Hin6I	GCGC	1 cut(s)	51
HinP1I	GCGC	1 cut(s)	51
HindIII	AAGCTT	3 cut(s)	120, 196, 1539
HinfI	GANTC	8 cut(s)	129, 181, 789, 902, 1134, 1571, 1709, 1726
HpaII	CCGG	5 cut(s)	94, 113, 126, 1282, 1628
HphI	GGTGA	4 cut(s)	271, 964, 1078, 1751
Hpy166II	GTNNAC	4 cut(s)	718, 890, 1082, 1770
Hpy8I	GTNNAC	4 cut(s)	718, 890, 1082, 1770
Hpy99I	CGWCG	3 cut(s)	239, 263, 1272
HpyAV	CCTTC	6 cut(s)	314, 400, 493, 932, 1037, 1601
HpyCH4III	ACNGT	2 cut(s)	702, 1040
HpyCH4IV	ACGT	2 cut(s)	892, 1084
HpyF10VI	GCNNNNNNNGC	8 cut(s)	57, 73, 195, 269, 281, 290, 855, 1519
HpyF3I	CTNAG	5 cut(s)	204, 441, 996, 1294, 1377
HpySE526I	ACGT	2 cut(s)	892, 1084
Hsp92II	CATG	7 cut(s)	81, 350, 385, 1391, 1441, 1456, 1472
HspAI	GCGC	1 cut(s)	51
Kpn2I	TCCGGA	2 cut(s)	125, 1627
Kzo9I	GATC	4 cut(s)	735, 1093, 1297, 1696
LguI	GCTCTTC	2 cut(s)	220, 542
LmnI	GCTCC	4 cut(s)	72, 194, 319, 1630
Lsp1109I	GCAGC	2 cut(s)	156, 163
LweI	GCATC	7 cut(s)	125, 348, 634, 670, 979, 1347, 1693
MaeI	CTAG	2 cut(s)	641, 962
MaeII	ACGT	2 cut(s)	892, 1084
MaeIII	GTNAC	5 cut(s)	702, 952, 1176, 1652, 1779
MalI	GATC	4 cut(s)	737, 1095, 1299, 1698
MbiI	CCGCTC	1 cut(s)	275
MboI	GATC	4 cut(s)	735, 1093, 1297, 1696
MboII	GAAGA	8 cut(s)	128, 207, 212, 559, 737, 770, 1403, 1853
MfeI	CAATTG	2 cut(s)	906, 1797
MflI	RGATCY	1 cut(s)	1297
MhlI	GDGCHC	4 cut(s)	215, 851, 1556, 1627
MluCI	AATT	8 cut(s)	103, 517, 799, 906, 1027, 1118, 1797, 1811
MlyI	GAGTC	3 cut(s)	190, 911, 1565
MmeI	TCCRAC	1 cut(s)	258
MroI	TCCGGA	2 cut(s)	125, 1627
MseI	TTAA	6 cut(s)	375, 465, 516, 534, 558, 626
MslI	CAYNNNNRTG	1 cut(s)	1682
MspA1I	CMGCKG	1 cut(s)	154
MspCI	CTTAAG	1 cut(s)	533
MspI	CCGG	5 cut(s)	94, 113, 126, 1282, 1628
MspR9I	CCNGG	4 cut(s)	266, 296, 1282, 1283
MunI	CAATTG	2 cut(s)	906, 1797
Mva1269I	GAATGC	2 cut(s)	451, 1269
MvaI	CCWGG	2 cut(s)	266, 296
MwoI	GCNNNNNNNGC	8 cut(s)	57, 73, 195, 269, 281, 290, 855, 1519
NciI	CCSGG	2 cut(s)	1282, 1283
NdeI	CATATG	1 cut(s)	1355
NdeII	GATC	4 cut(s)	735, 1093, 1297, 1696
NlaIII	CATG	7 cut(s)	81, 350, 385, 1391, 1441, 1456, 1472
NlaIV	GGNNCC	2 cut(s)	190, 241
NmeAIII	GCCGAG	2 cut(s)	145, 643
NmuCI	GTSAC	3 cut(s)	952, 1652, 1779
NspI	RCATGY	1 cut(s)	1441
NspV	TTCGAA	1 cut(s)	787
PagI	TCATGA	1 cut(s)	346
PciI	ACATGT	1 cut(s)	1437
PciSI	GCTCTTC	2 cut(s)	220, 542
PctI	GAATGC	2 cut(s)	451, 1269
PfeI	GAWTC	5 cut(s)	129, 789, 1134, 1709, 1726
PkrI	GCNGC	5 cut(s)	153, 171, 271, 274, 338
PleI	GAGTC	3 cut(s)	189, 910, 1565
PpsI	GAGTC	3 cut(s)	189, 910, 1565
PpuMI	RGGWCCY	2 cut(s)	323, 1610
PscI	ACATGT	1 cut(s)	1437
PshAI	GACNNNNGTC	2 cut(s)	723, 1659
PshBI	ATTAAT	2 cut(s)	375, 465
PsiI	TTATAA	1 cut(s)	1827
Psp124BI	GAGCTC	2 cut(s)	215, 1627
Psp5II	RGGWCCY	2 cut(s)	323, 1610
Psp6I	CCWGG	2 cut(s)	264, 294
PspFI	CCCAGC	1 cut(s)	242
PspGI	CCWGG	2 cut(s)	264, 294
PspN4I	GGNNCC	2 cut(s)	190, 241
PspPI	GGNCC	9 cut(s)	156, 239, 292, 298, 323, 674, 1102, 1384, 1610
PspPPI	RGGWCCY	2 cut(s)	323, 1610
PstNI	CAGNNNCTG	1 cut(s)	301
PsuI	RGATCY	1 cut(s)	1297
RsaI	GTAC	1 cut(s)	686
RsaNI	GTAC	1 cut(s)	685
RseI	CAYNNNNRTG	1 cut(s)	1682
SacI	GAGCTC	2 cut(s)	215, 1627
SapI	GCTCTTC	2 cut(s)	220, 542
SaqAI	TTAA	6 cut(s)	375, 465, 516, 534, 558, 626
SatI	GCNGC	5 cut(s)	152, 170, 270, 273, 337
Sau3AI	GATC	4 cut(s)	735, 1093, 1297, 1696
Sau96I	GGNCC	9 cut(s)	156, 239, 292, 298, 323, 674, 1102, 1384, 1610
SchI	GAGTC	3 cut(s)	190, 911, 1565
ScrFI	CCNGG	4 cut(s)	266, 296, 1282, 1283
SduI	GDGCHC	4 cut(s)	215, 851, 1556, 1627
SfaNI	GCATC	7 cut(s)	125, 348, 634, 670, 979, 1347, 1693
SfcI	CTRYAG	1 cut(s)	1036
SfuI	TTCGAA	1 cut(s)	787
SinI	GGWCC	5 cut(s)	156, 323, 1102, 1384, 1610
SmaI	CCCGGG	1 cut(s)	1283
SmiMI	CAYNNNNRTG	1 cut(s)	1682
SmlI	CTYRAG	1 cut(s)	533
SmoI	CTYRAG	1 cut(s)	533
Sse9I	AATT	8 cut(s)	103, 517, 799, 906, 1027, 1118, 1797, 1811
SsiI	CCGC	7 cut(s)	58, 154, 250, 270, 273, 282, 337
SspI	AATATT	2 cut(s)	373, 1207
SspMI	CTAG	2 cut(s)	641, 962
SstI	GAGCTC	2 cut(s)	215, 1627
StyD4I	CCNGG	4 cut(s)	264, 294, 1280, 1281
TaaI	ACNGT	2 cut(s)	702, 1040
TaiI	ACGT	2 cut(s)	895, 1087
TaqI	TCGA	5 cut(s)	29, 209, 660, 787, 1699
TaqII	GACCGA	1 cut(s)	1119
TasI	AATT	8 cut(s)	103, 517, 799, 906, 1027, 1118, 1797, 1811
TauI	GCSGC	3 cut(s)	272, 275, 339
TfiI	GAWTC	5 cut(s)	129, 789, 1134, 1709, 1726
Tru1I	TTAA	6 cut(s)	375, 465, 516, 534, 558, 626
Tru9I	TTAA	6 cut(s)	375, 465, 516, 534, 558, 626
TscAI	CASTG	7 cut(s)	53, 548, 759, 814, 963, 1045, 1568
TseFI	GTSAC	3 cut(s)	952, 1652, 1779
TseI	GCWGC	2 cut(s)	151, 169
Tsp45I	GTSAC	3 cut(s)	952, 1652, 1779
TspDTI	ATGAA	8 cut(s)	383, 419, 451, 1017, 1342, 1404, 1666, 1854
TspGWI	ACGGA	3 cut(s)	1535, 1738, 1745
TspMI	CCCGGG	1 cut(s)	1281
TspRI	CASTG	7 cut(s)	53, 548, 759, 814, 963, 1045, 1568
Vha464I	CTTAAG	1 cut(s)	533
VpaK11BI	GGWCC	5 cut(s)	156, 323, 1102, 1384, 1610
VspI	ATTAAT	2 cut(s)	375, 465
XagI	CCTNNNNNAGG	2 cut(s)	330, 1409
XapI	RAATTY	2 cut(s)	799, 1118
XceI	RCATGY	1 cut(s)	1441
XmaI	CCCGGG	1 cut(s)	1281
XmiI	GTMKAC	1 cut(s)	1769
XspI	CTAG	2 cut(s)	641, 962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.