Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0013463

Physical Location & Seq

Genomic Coordinates Forward (+)

43472814 .. 43475543

Gene Structure 2730 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1361300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGTTTCTTCTTTCTTTCTCCCCCTCTACTCTCTATCTCTCTCACCCTCTGTCTCACTCTCCATCTCTACTCTCTCTCTTTTGCCCCTTCTCTTATTCTCAAGCTCTCACAGAACTTTATATCCAACGGAGCCCAGCTCTCTCAGACCCAGATTCTGTGCCTGACTTCTCCTTTGCTTTCGCGGGATTTTTCAAACCTGCAAAACAGGCAATGCTTTCGCCGACTTTCTTGCCACCACGTATTGGTATCAGCCTTTATCAAACACCTTCTCTGCTCTCCATTCCACCGCCAAAACACACAAAGCATTCGAATTCAAAGCCTAATTATCTCAAAACCTCATCAAATTTTCGCTGTTTTTCTTGCGAAACTTCATCTTCTGCGTCAGATTTTCAGAATTCGAGCTCCCACGAAAACCCAGATGCTGAATTTTCGGTTCATCAATCGCTGAGCCAAAGCTTACGGCCCTACTTGCTTGCTCTTTGGCTTCGGTCATGTCGCAGTCTGAAAGAAGTGAGGAGATTGCATGCGATTGTTTTGAGGTGTTTGGCGAACCCGGTTACGTATGTTTTCAACAATTTGATGTGTGCGTATTTGGTTTTTGGGAAGTTGGGGGATGCCCGGAAGGTGTTTGATGAAATGACTCTGAGAAATGTGGTTTCTTGGACCGCCATTATTAATGGGTACTTGAACTTTGGTTTTGACGATGAGGCTTTGGGGTTGTTTGAGGAAGCTATCAATGATGGGGTTGTGCCGAATGGTAAGATGTTTGTGTGCTTGTTAAATTTATGTAGTGAGAGAGGGGATTATGAGCTTGGGAAGCAAATTCATTGTGGTGTTTTGAAAGGGGGTTGGAGCAACTTGATTGTTGACAGCGCCGTTGTTAAATTATATGCGCAGTGCGGAGAGCTAGCGAGTGCTTTCTGCGCATTTGATCAGATGCCGAAGTGGGATGTTGTTTGTTGGACAACTATGATCACTGCGTGTTCGCAACAAGGGCATGGACAGGAGGCTTTTTCGCTGTTCTCGCAGATGTTGAGTGATGGGTTTTCTCCGAATGAGTTTACAGTGTGTGGTGTTCTCAAGGCTTGTGGGGAAGAGAAGGAATTAGGATTTGGGAGACAGTTGCATGGTGCCATAGTTAAGAAGATTTACAAGAATGATATTTTCATAGACACTTCTCTAGTTGATATGTATGCAAAATGTGGGGAGATGGTAGACTCGAGAAATGTATTTGATGGAATGAGAAACCGAAACACAGTTACATGGACATCTATTATAGCAGGGTATGCGCGGAAGGGCCTCAGTGAGGAGGCCATATACCTCTTTCAAGTAATGAAGAGGAGGAACATATTGGTCAACAACTTGACCATTGTAAGCATCCTCAGAGCTTGTGGTGGGATTAGGAATTCGGTGATGGGGAGAGAAGTTCATGCACAGATAGTCAAGAACTCGGTCGAAAGACTCAAAACCAACTTACACCTAGGAAGTACTCTAGTGTGGTTCTACTGTAGGTGTGGAGAGTACTCCAATGCCACAAGGGTCCTCCAACAAATGCCTTTACGAGATGTTGTCTCATGGACTGCAATCATTTCTGGTTGTACACAACTTGGGCATGAGGCTGAAGCTCTTGAATTCTTGAAAGAAATGATGGAGGACGGGGTGGAGCCCAACGCGTTTACTTACTCATCTGCTTTGAAAGCATGTGCTAAGCTGGAAACTGTTCTGCACGGTAAATTGATTCACTCCTCTGCAAACAAAAGTCCTGCCATGTCTAATGTGTTTGTAGGTAGCGCTCTGATTTATATGTATGCAAAATGTGGGTACATAACAGAGGCATTTGAAGTTTTTGACAGCATGCCAGAACGTAATTTGGTTTCTTGGAAGGCTATGATAGTGGGTTATGCAACGAATGGTCTCTGCCAAGAGGCTATGAAGCTCATGTACCGTATGCGAGCAGAGGGTTTTGAGGTGGATGATTACATCCTTTCCACTGTTCTTACTGCATGTGGAGATCTTGGATGGGAGATAGATCCTTCTTTGGAGTGTAGCCTACGGTCTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

688

Amino Acids

76.51

Weight (kDa)

6.58

Isoelectric Point (pI)

44.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	317 - 363	1.4e-12	PPR repeat family
PPR	PF01535	319 - 349	2.6e-07	PPR repeat
PPR_2	PF13041	417 - 464	1.1e-10	PPR repeat family
PPR	PF01535	420 - 450	1.1e-07	PPR repeat
PPR_2	PF13041	521 - 570	6.9e-13	PPR repeat family
PPR_3	PF13812	522 - 569	7.3e-08	Pentatricopeptide repeat domain
PPR	PF01535	524 - 554	3.9e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18520
fragaria_vesca	FvH4_5g38291
malus_domestica	MD15G1361300.v1.1
prunus_persica	Prupe.1G508700_v2.0.a1
pyrus_communis	pycom15g32280
rosa_chinensis	RchiOBHm_Chr7g0240331
rosa_laevigata	RLG00000000684
rosa_multiflora	Rmu_sc0002676.1_g000012 Rmu_sc0025468.1_g000002 Rmu_sc0037875.1_g000001 Rmu_sc0038463.1_g000001
rosa_roxburghii	Rroxscaffold_3G00220210
rosa_rugosa	Rorug07G0334900
rosa_samantha	Rh7AG489200 Rh7BG462100 Rh7CG505400 Rh7DG473200
rosa_wichuraiana	Rw7G040930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	894, 925
Acc36I	ACCTGC	1 cut(s)	205
AccB1I	GGYRCC	1 cut(s)	1130
AccB7I	CCANNNNNTGG	1 cut(s)	242
AccI	GTMKAC	1 cut(s)	1215
AccII	CGCG	3 cut(s)	182, 1291, 1673
AciI	CCGC	5 cut(s)	182, 287, 666, 900, 1291
AclWI	GGATC	1 cut(s)	2024
AcsI	RAATTY	8 cut(s)	310, 343, 394, 425, 781, 822, 1405, 1631
AcuI	CTGAAG	1 cut(s)	1641
AdeI	CACNNNGTG	1 cut(s)	981
AfaI	GTAC	6 cut(s)	683, 1489, 1523, 1600, 1823, 1943
AfeI	AGCGCT	1 cut(s)	1792
AfiI	CCNNNNNNNGG	2 cut(s)	242, 1306
AflIII	ACRYGT	1 cut(s)	1671
AjuI	GAANNNNNNNTTGG	2 cut(s)	1095, 1127
AloI	GAACNNNNNNTCC	2 cut(s)	105, 137
Alw21I	GWGCWC	1 cut(s)	404
Alw26I	GTCTC	4 cut(s)	57, 1111, 1576, 1919
AlwI	GGATC	1 cut(s)	2024
AlwNI	CAGNNNCTG	2 cut(s)	155, 422
Ama87I	CYCGRG	1 cut(s)	1219
Aor51HI	AGCGCT	1 cut(s)	1792
AoxI	GGCC	3 cut(s)	461, 1297, 1311
ApoI	RAATTY	8 cut(s)	310, 343, 394, 425, 781, 822, 1405, 1631
ArsI	GACNNNNNNTTYG	2 cut(s)	155, 187
AseI	ATTAAT	1 cut(s)	675
Asp700I	GAANNNNTTC	1 cut(s)	1719
AspA2I	CCTAGG	1 cut(s)	1480
AspLEI	GCGC	5 cut(s)	875, 895, 926, 1291, 1793
AspS9I	GGNCC	4 cut(s)	462, 663, 1297, 1540
AsuC2I	CCSGG	2 cut(s)	554, 619
AsuHPI	GGTGA	2 cut(s)	35, 1423
AsuII	TTCGAA	1 cut(s)	308
AsuNHI	GCTAGC	1 cut(s)	907
AvaI	CYCGRG	1 cut(s)	1219
AvaII	GGWCC	2 cut(s)	663, 1540
AvrII	CCTAGG	1 cut(s)	1480
BanI	GGYRCC	1 cut(s)	1130
BanII	GRGCYC	3 cut(s)	134, 404, 1668
BarI	GAAGNNNNNNTAC	2 cut(s)	1925, 1957
Bbv12I	GWGCWC	1 cut(s)	404
BccI	CCATC	8 cut(s)	70, 734, 1034, 1204, 1229, 1408, 1642, 2013
BceAI	ACGGC	2 cut(s)	476, 860
BcgI	CGANNNNNNTGC	4 cut(s)	198, 211, 232, 245
BclI	TGATCA	2 cut(s)	931, 972
BcnI	CCSGG	2 cut(s)	554, 619
BcoDI	GTCTC	4 cut(s)	57, 1111, 1576, 1919
BfaI	CTAG	5 cut(s)	908, 1181, 1481, 1493, 2058
BfmI	CTRYAG	1 cut(s)	1507
BfoI	RGCGCY	2 cut(s)	876, 1794
BfuAI	ACCTGC	1 cut(s)	205
BglII	AGATCT	1 cut(s)	2011
BlnI	CCTAGG	1 cut(s)	1480
BlpI	GCTNAGC	2 cut(s)	446, 1707
BmcAI	AGTACT	2 cut(s)	1489, 1523
Bme1390I	CCNGG	2 cut(s)	554, 619
Bme18I	GGWCC	2 cut(s)	663, 1540
BmeT110I	CYCGRG	1 cut(s)	1219
BmgT120I	GGNCC	4 cut(s)	462, 663, 1297, 1540
BmiI	GGNNCC	4 cut(s)	131, 1132, 1541, 1665
BmrFI	CCNGG	2 cut(s)	554, 619
BmsI	GCATC	4 cut(s)	409, 604, 927, 1386
BmtI	GCTAGC	1 cut(s)	911
BplI	GAGNNNNNCTC	2 cut(s)	121, 153
Bpu1102I	GCTNAGC	2 cut(s)	446, 1707
Bpu14I	TTCGAA	1 cut(s)	308
BpuEI	CTTGAG	2 cut(s)	84, 1064
BpuMI	CCSGG	2 cut(s)	554, 619
BsaAI	YACGTR	2 cut(s)	239, 561
BsaI	GGTCTC	1 cut(s)	1919
BsaJI	CCNNGG	1 cut(s)	1480
Bsc4I	CCNNNNNNNGG	2 cut(s)	242, 1306
Bse3DI	GCAATG	1 cut(s)	216
BseDI	CCNNGG	1 cut(s)	1480
BseGI	GGATG	6 cut(s)	619, 955, 1377, 1978, 1980, 2024
BseLI	CCNNNNNNNGG	2 cut(s)	242, 1306
BseMI	GCAATG	1 cut(s)	216
BseMII	CTCAG	5 cut(s)	156, 437, 635, 1315, 1396
BseRI	GAGGAG	4 cut(s)	529, 1322, 1354, 1735
BseYI	CCCAGC	1 cut(s)	133
BsgI	GTGCAG	1 cut(s)	1709
Bsh1236I	CGCG	3 cut(s)	182, 1291, 1673
Bsh1285I	CGRYCG	1 cut(s)	1455
BshFI	GGCC	3 cut(s)	463, 1299, 1313
BshNI	GGYRCC	1 cut(s)	1130
BsiEI	CGRYCG	1 cut(s)	1455
BsiHKAI	GWGCWC	1 cut(s)	404
BsiHKCI	CYCGRG	1 cut(s)	1219
BsiSI	CCGG	2 cut(s)	554, 619
BslI	CCNNNNNNNGG	2 cut(s)	242, 1306
BsmAI	GTCTC	4 cut(s)	57, 1111, 1576, 1919
BsmI	GAATGC	1 cut(s)	304
BsnI	GGCC	3 cut(s)	463, 1299, 1313
Bso31I	GGTCTC	1 cut(s)	1919
BsoBI	CYCGRG	1 cut(s)	1219
Bsp119I	TTCGAA	1 cut(s)	308
Bsp1286I	GDGCHC	3 cut(s)	134, 404, 1668
Bsp1407I	TGTACA	1 cut(s)	1598
Bsp143I	GATC	4 cut(s)	931, 972, 2011, 2029
Bsp1720I	GCTNAGC	2 cut(s)	446, 1707
BspACI	CCGC	5 cut(s)	182, 287, 666, 900, 1291
BspANI	GGCC	3 cut(s)	463, 1299, 1313
BspCNI	CTCAG	5 cut(s)	155, 438, 636, 1314, 1395
BspFNI	CGCG	3 cut(s)	182, 1291, 1673
BspLI	GGNNCC	4 cut(s)	131, 1132, 1541, 1665
BspMI	ACCTGC	1 cut(s)	205
BspOI	GCTAGC	1 cut(s)	911
BspPI	GGATC	1 cut(s)	2024
BspT104I	TTCGAA	1 cut(s)	308
BspT107I	GGYRCC	1 cut(s)	1130
BspTNI	GGTCTC	1 cut(s)	1919
BsrDI	GCAATG	1 cut(s)	216
BsrGI	TGTACA	1 cut(s)	1598
BssECI	CCNNGG	1 cut(s)	1480
BssMI	GATC	4 cut(s)	931, 972, 2011, 2029
BssT1I	CCWWGG	1 cut(s)	1480
Bst4CI	ACNGT	9 cut(s)	1066, 1122, 1258, 1508, 1720, 1730, 1946, 1993, 2055
Bst6I	CTCTTC	2 cut(s)	1089, 1331
BstAPI	GCANNNNNTGC	1 cut(s)	1286
BstAUI	TGTACA	1 cut(s)	1598
BstBAI	YACGTR	2 cut(s)	239, 561
BstBI	TTCGAA	1 cut(s)	308
BstC8I	GCNNGC	5 cut(s)	474, 525, 909, 1856, 1953
BstDEI	CTNAG	6 cut(s)	142, 446, 644, 1301, 1382, 1707
BstENI	CCTNNNNNAGG	1 cut(s)	1304
BstF5I	GGATG	6 cut(s)	619, 955, 1377, 1978, 1980, 2024
BstFNI	CGCG	3 cut(s)	182, 1291, 1673
BstH2I	RGCGCY	2 cut(s)	876, 1794
BstHHI	GCGC	5 cut(s)	875, 895, 926, 1291, 1793
BstKTI	GATC	4 cut(s)	934, 975, 2014, 2032
BstMAI	GTCTC	4 cut(s)	57, 1111, 1576, 1919
BstMBI	GATC	4 cut(s)	931, 972, 2011, 2029
BstMCI	CGRYCG	1 cut(s)	1455
BstMWI	GCNNNNNNNGC	8 cut(s)	206, 469, 817, 923, 994, 1024, 1286, 1697
BstNSI	RCATGY	4 cut(s)	527, 1704, 1858, 2007
BstSCI	CCNGG	2 cut(s)	552, 617
BstSFI	CTRYAG	1 cut(s)	1507
BstSNI	TACGTA	1 cut(s)	561
BstUI	CGCG	3 cut(s)	182, 1291, 1673
BstX2I	RGATCY	2 cut(s)	2011, 2029
BstYI	RGATCY	2 cut(s)	2011, 2029
BsuRI	GGCC	3 cut(s)	463, 1299, 1313
BtsCI	GGATG	6 cut(s)	619, 955, 1377, 1978, 1980, 2024
BtsI	GCAGTG	2 cut(s)	902, 975
BtsIMutI	CAGTG	5 cut(s)	902, 975, 1071, 1309, 1989
BveI	ACCTGC	1 cut(s)	205
Cac8I	GCNNGC	5 cut(s)	474, 525, 909, 1856, 1953
CaiI	CAGNNNCTG	2 cut(s)	155, 422
CfoI	GCGC	5 cut(s)	875, 895, 926, 1291, 1793
Cfr13I	GGNCC	4 cut(s)	462, 663, 1297, 1540
CseI	GACGC	1 cut(s)	369
Csp6I	GTAC	6 cut(s)	682, 1488, 1522, 1599, 1822, 1942
CspCI	CAANNNNNGTGG	2 cut(s)	1069, 1104
CviQI	GTAC	6 cut(s)	682, 1488, 1522, 1599, 1822, 1942
DdeI	CTNAG	6 cut(s)	142, 446, 644, 1301, 1382, 1707
DpnI	GATC	4 cut(s)	933, 974, 2013, 2031
DpnII	GATC	4 cut(s)	931, 972, 2011, 2029
DraIII	CACNNNGTG	1 cut(s)	981
Eam1104I	CTCTTC	2 cut(s)	1089, 1331
EarI	CTCTTC	2 cut(s)	1089, 1331
Ecl136II	GAGCTC	1 cut(s)	402
Eco105I	TACGTA	1 cut(s)	561
Eco130I	CCWWGG	1 cut(s)	1480
Eco24I	GRGCYC	3 cut(s)	134, 404, 1668
Eco31I	GGTCTC	1 cut(s)	1919
Eco47I	GGWCC	2 cut(s)	663, 1540
Eco47III	AGCGCT	1 cut(s)	1792
Eco53kI	GAGCTC	1 cut(s)	402
Eco57I	CTGAAG	1 cut(s)	1641
Eco88I	CYCGRG	1 cut(s)	1219
EcoICRI	GAGCTC	1 cut(s)	402
EcoNI	CCTNNNNNAGG	1 cut(s)	1304
EcoO109I	RGGNCCY	2 cut(s)	1297, 1540
EcoRI	GAATTC	4 cut(s)	310, 394, 1405, 1631
EcoT14I	CCWWGG	1 cut(s)	1480
EcoT38I	GRGCYC	3 cut(s)	134, 404, 1668
ErhI	CCWWGG	1 cut(s)	1480
FauI	CCCGC	1 cut(s)	175
FbaI	TGATCA	2 cut(s)	931, 972
FblI	GTMKAC	1 cut(s)	1215
FokI	GGATG	6 cut(s)	626, 962, 1364, 1967, 1985, 2031
FriOI	GRGCYC	3 cut(s)	134, 404, 1668
FspBI	CTAG	5 cut(s)	908, 1181, 1481, 1493, 2058
FspI	TGCGCA	2 cut(s)	894, 925
GlaI	GCGC	5 cut(s)	874, 894, 925, 1290, 1792
GsaI	CCCAGC	1 cut(s)	137
HaeII	RGCGCY	2 cut(s)	876, 1794
HaeIII	GGCC	3 cut(s)	463, 1299, 1313
HapII	CCGG	2 cut(s)	554, 619
HgaI	GACGC	1 cut(s)	369
HhaI	GCGC	5 cut(s)	875, 895, 926, 1291, 1793
Hin6I	GCGC	5 cut(s)	873, 893, 924, 1289, 1791
HinP1I	GCGC	5 cut(s)	873, 893, 924, 1289, 1791
HincII	GTYRAC	2 cut(s)	868, 1357
HindII	GTYRAC	2 cut(s)	868, 1357
HindIII	AAGCTT	1 cut(s)	454
HinfI	GANTC	5 cut(s)	152, 640, 1217, 1461, 1738
HpaII	CCGG	2 cut(s)	554, 619
HphI	GGTGA	2 cut(s)	35, 1423
Hpy166II	GTNNAC	6 cut(s)	868, 1062, 1216, 1357, 1601, 1677
Hpy188I	TCNGA	9 cut(s)	145, 385, 393, 504, 645, 936, 1053, 1385, 1797
Hpy188III	TCNNGA	4 cut(s)	1221, 1444, 1628, 1636
Hpy8I	GTNNAC	6 cut(s)	868, 1062, 1216, 1357, 1601, 1677
HpyAV	CCTTC	7 cut(s)	97, 276, 616, 1093, 1288, 1876, 2043
HpyCH4III	ACNGT	9 cut(s)	1066, 1122, 1258, 1508, 1720, 1730, 1946, 1993, 2055
HpyCH4IV	ACGT	3 cut(s)	238, 560, 1864
HpyF10VI	GCNNNNNNNGC	8 cut(s)	206, 469, 817, 923, 994, 1024, 1286, 1697
HpyF3I	CTNAG	6 cut(s)	142, 446, 644, 1301, 1382, 1707
HpySE526I	ACGT	3 cut(s)	238, 560, 1864
HspAI	GCGC	5 cut(s)	873, 893, 924, 1289, 1791
Ksp22I	TGATCA	2 cut(s)	931, 972
Kzo9I	GATC	4 cut(s)	931, 972, 2011, 2029
LmnI	GCTCC	4 cut(s)	129, 407, 852, 1663
LweI	GCATC	4 cut(s)	409, 604, 927, 1386
MaeI	CTAG	5 cut(s)	908, 1181, 1481, 1493, 2058
MaeII	ACGT	3 cut(s)	238, 560, 1864
MaeIII	GTNAC	2 cut(s)	556, 1258
MalI	GATC	4 cut(s)	933, 974, 2013, 2031
MboI	GATC	4 cut(s)	931, 972, 2011, 2029
MboII	GAAGA	4 cut(s)	366, 1106, 1156, 1348
MflI	RGATCY	2 cut(s)	2011, 2029
MhlI	GDGCHC	3 cut(s)	134, 404, 1668
MluI	ACGCGT	1 cut(s)	1671
MlyI	GAGTC	3 cut(s)	634, 1211, 1455
MmeI	TCCRAC	4 cut(s)	148, 830, 941, 1570
MroXI	GAANNNNTTC	1 cut(s)	1719
MseI	TTAA	4 cut(s)	675, 779, 882, 1140
MslI	CAYNNNNRTG	1 cut(s)	831
MspI	CCGG	2 cut(s)	554, 619
MspR9I	CCNGG	2 cut(s)	554, 619
Mva1269I	GAATGC	1 cut(s)	304
MvnI	CGCG	3 cut(s)	182, 1291, 1673
MwoI	GCNNNNNNNGC	8 cut(s)	206, 469, 817, 923, 994, 1024, 1286, 1697
NciI	CCSGG	2 cut(s)	554, 619
NdeII	GATC	4 cut(s)	931, 972, 2011, 2029
NheI	GCTAGC	1 cut(s)	907
NlaIV	GGNNCC	4 cut(s)	131, 1132, 1541, 1665
NsbI	TGCGCA	2 cut(s)	894, 925
NspI	RCATGY	4 cut(s)	527, 1704, 1858, 2007
NspV	TTCGAA	1 cut(s)	308
PaeI	GCATGC	2 cut(s)	527, 1858
PaeR7I	CTCGAG	1 cut(s)	1219
PctI	GAATGC	1 cut(s)	304
PdmI	GAANNNNTTC	1 cut(s)	1719
PfeI	GAWTC	2 cut(s)	152, 1738
PflMI	CCANNNNNTGG	1 cut(s)	242
PleI	GAGTC	3 cut(s)	634, 1211, 1455
PpsI	GAGTC	3 cut(s)	634, 1211, 1455
Ppu21I	YACGTR	2 cut(s)	239, 561
PpuMI	RGGWCCY	1 cut(s)	1540
PshBI	ATTAAT	1 cut(s)	675
Psp124BI	GAGCTC	1 cut(s)	404
Psp5II	RGGWCCY	1 cut(s)	1540
PspFI	CCCAGC	1 cut(s)	133
PspN4I	GGNNCC	4 cut(s)	131, 1132, 1541, 1665
PspPI	GGNCC	4 cut(s)	462, 663, 1297, 1540
PspPPI	RGGWCCY	1 cut(s)	1540
PstNI	CAGNNNCTG	2 cut(s)	155, 422
PsuI	RGATCY	2 cut(s)	2011, 2029
RsaI	GTAC	6 cut(s)	683, 1489, 1523, 1600, 1823, 1943
RsaNI	GTAC	6 cut(s)	682, 1488, 1522, 1599, 1822, 1942
RseI	CAYNNNNRTG	1 cut(s)	831
SacI	GAGCTC	1 cut(s)	404
SaqAI	TTAA	4 cut(s)	675, 779, 882, 1140
Sau3AI	GATC	4 cut(s)	931, 972, 2011, 2029
Sau96I	GGNCC	4 cut(s)	462, 663, 1297, 1540
ScaI	AGTACT	2 cut(s)	1489, 1523
SchI	GAGTC	3 cut(s)	634, 1211, 1455
ScrFI	CCNGG	2 cut(s)	554, 619
SduI	GDGCHC	3 cut(s)	134, 404, 1668
SfaNI	GCATC	4 cut(s)	409, 604, 927, 1386
SfcI	CTRYAG	1 cut(s)	1507
Sfr274I	CTCGAG	1 cut(s)	1219
SfuI	TTCGAA	1 cut(s)	308
SinI	GGWCC	2 cut(s)	663, 1540
SlaI	CTCGAG	1 cut(s)	1219
SmiMI	CAYNNNNRTG	1 cut(s)	831
SmlI	CTYRAG	3 cut(s)	99, 1079, 1219
SmoI	CTYRAG	3 cut(s)	99, 1079, 1219
SnaBI	TACGTA	1 cut(s)	561
SphI	GCATGC	2 cut(s)	527, 1858
SsiI	CCGC	5 cut(s)	182, 287, 666, 900, 1291
SspMI	CTAG	5 cut(s)	908, 1181, 1481, 1493, 2058
SstI	GAGCTC	1 cut(s)	404
StyD4I	CCNGG	2 cut(s)	552, 617
StyI	CCWWGG	1 cut(s)	1480
TaaI	ACNGT	9 cut(s)	1066, 1122, 1258, 1508, 1720, 1730, 1946, 1993, 2055
TaiI	ACGT	3 cut(s)	241, 563, 1867
TaqI	TCGA	4 cut(s)	308, 398, 1220, 1455
TaqII	GACCGA	2 cut(s)	477, 1441
TatI	WGTACW	3 cut(s)	1487, 1521, 1598
TfiI	GAWTC	2 cut(s)	152, 1738
Tru1I	TTAA	4 cut(s)	675, 779, 882, 1140
Tru9I	TTAA	4 cut(s)	675, 779, 882, 1140
TscAI	CASTG	5 cut(s)	902, 982, 1071, 1309, 1996
TspDTI	ATGAA	8 cut(s)	360, 425, 648, 815, 1156, 1349, 1418, 1946
TspGWI	ACGGA	1 cut(s)	142
TspRI	CASTG	5 cut(s)	902, 982, 1071, 1309, 1996
Van91I	CCANNNNNTGG	1 cut(s)	242
VpaK11BI	GGWCC	2 cut(s)	663, 1540
VspI	ATTAAT	1 cut(s)	675
XagI	CCTNNNNNAGG	1 cut(s)	1304
XapI	RAATTY	8 cut(s)	310, 343, 394, 425, 781, 822, 1405, 1631
XceI	RCATGY	4 cut(s)	527, 1704, 1858, 2007
XhoI	CTCGAG	1 cut(s)	1219
XmaJI	CCTAGG	1 cut(s)	1480
XmiI	GTMKAC	1 cut(s)	1215
XmnI	GAANNNNTTC	1 cut(s)	1719
XspI	CTAG	5 cut(s)	908, 1181, 1481, 1493, 2058
ZrmI	AGTACT	2 cut(s)	1489, 1523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.