Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0013463

Physical Location & Seq

Genomic Coordinates Reverse (-)

54793220 .. 54795658

Gene Structure 2439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG462100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGCTTTCGCCAACTTTTCTGCCACCACATATTGGCTTCAATCTCTATCAAACGCCTTCTCTCTTCTCTATTCAACCACCAAAACCAATAAAGCATTCAAATTCAAGAACCATAAACAACAGAACCCCCTCTAATTTTCGTTCTTCTTTTTCTGAAATCCCATCTGCTGCATACGCTGTTCAAGATTTAAGGTCCCCAGAAAACCCAGATGCCGAATTCTCCGATACACGGTCACTCAGCCAGAGCTTAAGACCCTATCTGCTTGCGCTTTGGCTTCGGTCGTGTCGTAGTCTAAACGAAGTAAGAAGAATTCATGCGCTTATTTTGAGGTGTATAGGCAATCCTGTTACGTATGTTTTCAATAATTTGATGTGTGCGTATTTGGGTTTTGGGAAGTTAGTTCATGCACGCAAGGTGTTCGACGAAATGGCTGTGAGAAATGTGGTTTCTTGGACCGCTATTATTAATGGGTACTTGAGCTTTGGGTTGGATGATGAAGGTTTGGGGTTGTTTAGTGAGGCTATTGATGAGGGGATTCAACCGAACGGGAATATGTTTGTGTGTGTGTTGAATTTGTGTTGTAAGAGGTTGGATTATGAGCTCGGGAGGCAAATCCATGCAGGGATTGTAAAAGGTGGTTGGAGTAACATGATTGTTGACAGCGCTATTGTTAAGTTGTATGCGCAATGTGGAGAGTTGTCATGTGCTTTTCGCGCGTTTGATCAGATGCCGGAGTTGGATGTAGTTTGTTGGACAACTATGATAACTGCTTGTTCTCAACAGGGGCATGGGCAGGAGGCTTTCTCGCTGTTCTCGCAGATGTTAAGTGATGGGTTTTCTCCAAATGAGTTTACGGTGTGCGGTGTTCTCAAGGCTTGTGGTGAAGAGAAGGAGTTAAGGTTTGGGAGACAGTTACATGGTGCCATAGTGAAGAAGATTTACAAGAGTGATATTTTTGTAGCCACTTCTCTTGTGGATATGTATGCAAAGTGTGGGGAGATTGAAGACTCGAGAAATGTATTTGATGGAATGAGGAACAGAAACACAGTTACATGGACATCTATTATAGCAGGGTATGCAAGGAAGGGTCTCAGTGAGGAAGCCATATGCCTCTTTCGACTAATGAAGAGGCGAAACATACATGTCAACAACTTGACCATTGTAAGCATCCTCAGAGCTTGTGGATTGATTAGGTATTCACCAATGGGTAGGGAAGTTCACGCACAGATAATCAAACACTCGGTCGAAACAAACTTATATCTAGGAAGTACTCTAGTGTGGTTCTACTGCAAGTGTGGGGATTACTCTACTGCCACAAAAGTCCTCCAACAAATGCCTCTCAGAGATGTTGTCTCGTGGACTGCCATCATTTCTGGTTGTGCACATCTTGGACATGAGTCTGAAGCTATTGAGTTGTTGAAAGAAATGATGGAGGACGGGGTGGAACCCAATGCATTTACTTATTCATCTGCTTTGAAAGCATGTGCTAACTTGGAAACCATTCTGCACGGCCAATTGATTCACTCCTCTGCAAATAAAAGTCCAGCCATGTCCAATGTGTTTGTGGGGAGCGCTTTGATTTACATGTATGCAAAATGTGGCTATGTAACGGAGGCATTTCAAGTTTTTGACAGCATGCCTGAACGGAATCTGGTATCATGGAAGGCTATGATAGTGGGTTATGCAAGGAACGGTCACTGTCAAGAGGCTTTGAAGCTCATGTATCGAATGCAAGCAGAGGGTTTTCAGCTGGATGATTACATCCTCGCTACTGTTCTCACTGCATGTGGAGATCTTGAGTGGGATATGGATCCTTCATTCGTGTGTAGCCTGCGGTCCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

614

Amino Acids

68.73

Weight (kDa)

6.92

Isoelectric Point (pI)

50.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	247 - 293	9.7e-13	PPR repeat family
PPR	PF01535	249 - 279	2.2e-07	PPR repeat
PPR_2	PF13041	347 - 394	3.6e-11	PPR repeat family
PPR	PF01535	350 - 380	3.5e-08	PPR repeat
PPR_2	PF13041	448 - 497	2.2e-13	PPR repeat family
PPR_3	PF13812	449 - 496	5.3e-08	Pentatricopeptide repeat domain
PPR	PF01535	451 - 481	2.8e-07	PPR repeat
PPR	PF01535	552 - 582	1.2e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18520
fragaria_vesca	FvH4_5g38291
malus_domestica	MD15G1361300.v1.1
prunus_persica	Prupe.1G508700_v2.0.a1
pyrus_communis	pycom15g32280
rosa_chinensis	RchiOBHm_Chr7g0240331
rosa_laevigata	RLG00000000684
rosa_multiflora	Rmu_sc0002676.1_g000012 Rmu_sc0025468.1_g000002 Rmu_sc0037875.1_g000001 Rmu_sc0038463.1_g000001
rosa_roxburghii	Rroxscaffold_3G00220210
rosa_rugosa	Rorug07G0334900
rosa_samantha	Rh7AG489200 Rh7BG462100 Rh7CG505400 Rh7DG473200
rosa_wichuraiana	Rw7G040930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	684
AccB1I	GGYRCC	1 cut(s)	920
AccB7I	CCANNNNNTGG	1 cut(s)	32
AccII	CGCG	2 cut(s)	714, 716
AciI	CCGC	3 cut(s)	456, 861, 1834
AclWI	GGATC	2 cut(s)	1805, 1818
AcoI	YGGCCR	1 cut(s)	1510
AcsI	RAATTY	4 cut(s)	100, 215, 309, 571
AcuI	CTGAAG	1 cut(s)	1422
AfaI	GTAC	2 cut(s)	473, 1270
AfeI	AGCGCT	2 cut(s)	664, 1573
AfiI	CCNNNNNNNGG	2 cut(s)	32, 228
AflII	CTTAAG	1 cut(s)	247
AflIII	ACRYGT	2 cut(s)	1141, 1584
AjnI	CCWGG	1 cut(s)	1838
AjuI	GAANNNNNNNTTGG	2 cut(s)	79, 111
AluBI	AGCT	7 cut(s)	246, 480, 601, 1178, 1406, 1717, 1750
AluI	AGCT	7 cut(s)	246, 480, 601, 1178, 1406, 1717, 1750
Alw21I	GWGCWC	2 cut(s)	603, 1384
Alw26I	GTCTC	3 cut(s)	901, 1094, 1357
Alw44I	GTGCAC	1 cut(s)	1380
AlwI	GGATC	2 cut(s)	1805, 1818
Ama87I	CYCGRG	2 cut(s)	602, 1009
Aor51HI	AGCGCT	2 cut(s)	664, 1573
AoxI	GGCC	1 cut(s)	1510
ApaLI	GTGCAC	1 cut(s)	1380
ApeKI	GCWGC	1 cut(s)	167
ApoI	RAATTY	4 cut(s)	100, 215, 309, 571
ArsI	GACNNNNNNTTYG	2 cut(s)	1227, 1259
AseI	ATTAAT	1 cut(s)	465
Asp700I	GAANNNNTTC	1 cut(s)	1500
AspLEI	GCGC	6 cut(s)	268, 319, 665, 685, 716, 1574
AspS9I	GGNCC	3 cut(s)	192, 453, 1836
AsuHPI	GGTGA	2 cut(s)	893, 1191
AvaI	CYCGRG	2 cut(s)	602, 1009
AvaII	GGWCC	3 cut(s)	192, 453, 1836
BaeGI	GKGCMC	1 cut(s)	1384
BamHI	GGATCC	1 cut(s)	1810
BanI	GGYRCC	1 cut(s)	920
BanII	GRGCYC	1 cut(s)	603
BarI	GAAGNNNNNNTAC	2 cut(s)	923, 955
BauI	CACGAG	1 cut(s)	1354
BbsI	GAAGAC	1 cut(s)	1011
Bbv12I	GWGCWC	2 cut(s)	603, 1384
BbvI	GCAGC	1 cut(s)	154
BccI	CCATC	5 cut(s)	169, 824, 1019, 1373, 1423
BceAI	ACGGC	1 cut(s)	1525
BcgI	CGANNNNNNTGC	2 cut(s)	400, 434
BciT130I	CCWGG	1 cut(s)	1840
BclI	TGATCA	1 cut(s)	721
BcoDI	GTCTC	3 cut(s)	901, 1094, 1357
BfaI	CTAG	2 cut(s)	1262, 1274
BfoI	RGCGCY	2 cut(s)	666, 1575
BfrI	CTTAAG	1 cut(s)	247
BglII	AGATCT	1 cut(s)	1792
BisI	GCNGC	1 cut(s)	168
BlsI	GCNGC	1 cut(s)	169
BmcAI	AGTACT	1 cut(s)	1270
Bme1390I	CCNGG	1 cut(s)	1840
Bme18I	GGWCC	3 cut(s)	192, 453, 1836
BmeT110I	CYCGRG	2 cut(s)	602, 1009
BmgT120I	GGNCC	3 cut(s)	192, 453, 1836
BmiI	GGNNCC	4 cut(s)	194, 922, 1446, 1812
BmrFI	CCNGG	1 cut(s)	1840
BmsI	GCATC	3 cut(s)	199, 717, 1176
BoxI	GACNNNNGTC	1 cut(s)	1396
BpiI	GAAGAC	1 cut(s)	1011
BplI	GAGNNNNNCTC	2 cut(s)	788, 820
BpuEI	CTTGAG	3 cut(s)	496, 854, 1817
BsaAI	YACGTR	1 cut(s)	351
BsaBI	GATNNNNATC	1 cut(s)	1809
BsaI	GGTCTC	1 cut(s)	1094
BsaXI	ACNNNNNCTCC	2 cut(s)	884, 914
Bsc4I	CCNNNNNNNGG	2 cut(s)	32, 228
Bse3DI	GCAATG	1 cut(s)	692
Bse8I	GATNNNNATC	1 cut(s)	1809
BseBI	CCWGG	1 cut(s)	1840
BseGI	GGATG	5 cut(s)	496, 745, 1167, 1759, 1761
BseJI	GATNNNNATC	1 cut(s)	1809
BseLI	CCNNNNNNNGG	2 cut(s)	32, 228
BseMI	GCAATG	1 cut(s)	692
BseMII	CTCAG	4 cut(s)	250, 1105, 1186, 1354
BseRI	GAGGAG	1 cut(s)	1516
BseSI	GKGCMC	1 cut(s)	1384
BseXI	GCAGC	1 cut(s)	154
BsgI	GTGCAG	1 cut(s)	1490
Bsh1236I	CGCG	2 cut(s)	714, 716
Bsh1285I	CGRYCG	2 cut(s)	281, 1245
BshFI	GGCC	1 cut(s)	1512
BshNI	GGYRCC	1 cut(s)	920
BsiEI	CGRYCG	2 cut(s)	281, 1245
BsiHKAI	GWGCWC	2 cut(s)	603, 1384
BsiHKCI	CYCGRG	2 cut(s)	602, 1009
BsiSI	CCGG	1 cut(s)	731
BslFI	GGGAC	1 cut(s)	178
BslI	CCNNNNNNNGG	2 cut(s)	32, 228
BsmAI	GTCTC	3 cut(s)	901, 1094, 1357
BsmFI	GGGAC	1 cut(s)	178
BsmI	GAATGC	2 cut(s)	94, 1734
BsnI	GGCC	1 cut(s)	1512
Bso31I	GGTCTC	1 cut(s)	1094
BsoBI	CYCGRG	2 cut(s)	602, 1009
Bsp1286I	GDGCHC	2 cut(s)	603, 1384
Bsp143I	GATC	3 cut(s)	721, 1792, 1810
BspACI	CCGC	3 cut(s)	456, 861, 1834
BspANI	GGCC	1 cut(s)	1512
BspCNI	CTCAG	4 cut(s)	249, 1104, 1185, 1353
BspFNI	CGCG	2 cut(s)	714, 716
BspLI	GGNNCC	4 cut(s)	194, 922, 1446, 1812
BspPI	GGATC	2 cut(s)	1805, 1818
BspT107I	GGYRCC	1 cut(s)	920
BspTI	CTTAAG	1 cut(s)	247
BspTNI	GGTCTC	1 cut(s)	1094
BsrDI	GCAATG	1 cut(s)	692
BssMI	GATC	3 cut(s)	721, 1792, 1810
BssSI	CACGAG	1 cut(s)	1354
Bst2BI	CACGAG	1 cut(s)	1354
Bst2UI	CCWGG	1 cut(s)	1840
Bst4CI	ACNGT	7 cut(s)	231, 856, 912, 1048, 1694, 1700, 1774
Bst6I	CTCTTC	3 cut(s)	68, 879, 1121
BstAFI	CTTAAG	1 cut(s)	247
BstAPI	GCANNNNNTGC	1 cut(s)	1076
BstBAI	YACGTR	1 cut(s)	351
BstC8I	GCNNGC	5 cut(s)	264, 409, 1637, 1734, 1832
BstDEI	CTNAG	4 cut(s)	236, 1091, 1172, 1340
BstF5I	GGATG	5 cut(s)	496, 745, 1167, 1759, 1761
BstFNI	CGCG	2 cut(s)	714, 716
BstH2I	RGCGCY	2 cut(s)	666, 1575
BstHHI	GCGC	6 cut(s)	268, 319, 665, 685, 716, 1574
BstKTI	GATC	3 cut(s)	724, 1795, 1813
BstMAI	GTCTC	3 cut(s)	901, 1094, 1357
BstMBI	GATC	3 cut(s)	721, 1792, 1810
BstMCI	CGRYCG	2 cut(s)	281, 1245
BstMWI	GCNNNNNNNGC	6 cut(s)	173, 607, 713, 814, 1076, 1478
BstNI	CCWGG	1 cut(s)	1840
BstNSI	RCATGY	5 cut(s)	1145, 1485, 1588, 1639, 1788
BstPAI	GACNNNNGTC	1 cut(s)	1396
BstSCI	CCNGG	1 cut(s)	1838
BstSLI	GKGCMC	1 cut(s)	1384
BstSNI	TACGTA	1 cut(s)	351
BstUI	CGCG	2 cut(s)	714, 716
BstV1I	GCAGC	1 cut(s)	154
BstV2I	GAAGAC	1 cut(s)	1011
BstX2I	RGATCY	2 cut(s)	1792, 1810
BstYI	RGATCY	2 cut(s)	1792, 1810
BsuRI	GGCC	1 cut(s)	1512
BtsCI	GGATG	5 cut(s)	496, 745, 1167, 1759, 1761
BtsI	GCAGTG	1 cut(s)	1779
BtsIMutI	CAGTG	3 cut(s)	1099, 1696, 1779
Cac8I	GCNNGC	5 cut(s)	264, 409, 1637, 1734, 1832
CfoI	GCGC	6 cut(s)	268, 319, 665, 685, 716, 1574
Cfr13I	GGNCC	3 cut(s)	192, 453, 1836
Csp6I	GTAC	2 cut(s)	472, 1269
CspCI	CAANNNNNGTGG	4 cut(s)	859, 894, 952, 987
CviQI	GTAC	2 cut(s)	472, 1269
DdeI	CTNAG	4 cut(s)	236, 1091, 1172, 1340
DpnI	GATC	3 cut(s)	723, 1794, 1812
DpnII	GATC	3 cut(s)	721, 1792, 1810
EaeI	YGGCCR	1 cut(s)	1510
Eam1104I	CTCTTC	3 cut(s)	68, 879, 1121
EarI	CTCTTC	3 cut(s)	68, 879, 1121
Ecl136II	GAGCTC	1 cut(s)	601
Eco105I	TACGTA	1 cut(s)	351
Eco24I	GRGCYC	1 cut(s)	603
Eco31I	GGTCTC	1 cut(s)	1094
Eco47I	GGWCC	3 cut(s)	192, 453, 1836
Eco47III	AGCGCT	2 cut(s)	664, 1573
Eco53kI	GAGCTC	1 cut(s)	601
Eco57I	CTGAAG	1 cut(s)	1422
Eco88I	CYCGRG	2 cut(s)	602, 1009
EcoICRI	GAGCTC	1 cut(s)	601
EcoO109I	RGGNCCY	1 cut(s)	192
EcoRI	GAATTC	2 cut(s)	215, 309
EcoRII	CCWGG	1 cut(s)	1838
EcoT22I	ATGCAT	1 cut(s)	1456
EcoT38I	GRGCYC	1 cut(s)	603
FaqI	GGGAC	1 cut(s)	178
FauNDI	CATATG	1 cut(s)	1106
FbaI	TGATCA	1 cut(s)	721
Fnu4HI	GCNGC	1 cut(s)	168
FokI	GGATG	5 cut(s)	503, 752, 1154, 1748, 1766
FriOI	GRGCYC	1 cut(s)	603
Fsp4HI	GCNGC	1 cut(s)	168
FspBI	CTAG	2 cut(s)	1262, 1274
FspI	TGCGCA	1 cut(s)	684
GlaI	GCGC	6 cut(s)	267, 318, 664, 684, 715, 1573
GluI	GCNGC	1 cut(s)	168
HaeII	RGCGCY	2 cut(s)	666, 1575
HaeIII	GGCC	1 cut(s)	1512
HapII	CCGG	1 cut(s)	731
HhaI	GCGC	6 cut(s)	268, 319, 665, 685, 716, 1574
Hin6I	GCGC	6 cut(s)	266, 317, 663, 683, 714, 1572
HinP1I	GCGC	6 cut(s)	266, 317, 663, 683, 714, 1572
HincII	GTYRAC	2 cut(s)	658, 1147
HindII	GTYRAC	2 cut(s)	658, 1147
HinfI	GANTC	5 cut(s)	535, 1007, 1397, 1519, 1648
HpaII	CCGG	1 cut(s)	731
HphI	GGTGA	2 cut(s)	893, 1191
Hpy166II	GTNNAC	6 cut(s)	658, 852, 1147, 1219, 1359, 1382
Hpy188I	TCNGA	6 cut(s)	154, 223, 726, 1175, 1343, 1402
Hpy188III	TCNNGA	6 cut(s)	105, 182, 604, 1011, 1703, 1796
Hpy8I	GTNNAC	6 cut(s)	658, 852, 1147, 1219, 1359, 1382
Hpy99I	CGWCG	1 cut(s)	425
HpyAV	CCTTC	6 cut(s)	66, 491, 883, 1078, 1657, 1824
HpyCH4III	ACNGT	7 cut(s)	231, 856, 912, 1048, 1694, 1700, 1774
HpyCH4IV	ACGT	1 cut(s)	350
HpyF10VI	GCNNNNNNNGC	6 cut(s)	173, 607, 713, 814, 1076, 1478
HpyF3I	CTNAG	4 cut(s)	236, 1091, 1172, 1340
HpySE526I	ACGT	1 cut(s)	350
HspAI	GCGC	6 cut(s)	266, 317, 663, 683, 714, 1572
Ksp22I	TGATCA	1 cut(s)	721
Kzo9I	GATC	3 cut(s)	721, 1792, 1810
LmnI	GCTCC	1 cut(s)	1569
Lsp1109I	GCAGC	1 cut(s)	154
LweI	GCATC	3 cut(s)	199, 717, 1176
MaeI	CTAG	2 cut(s)	1262, 1274
MaeII	ACGT	1 cut(s)	350
MaeIII	GTNAC	7 cut(s)	231, 346, 644, 912, 1048, 1606, 1694
MalI	GATC	3 cut(s)	723, 1794, 1812
MboI	GATC	3 cut(s)	721, 1792, 1810
MboII	GAAGA	8 cut(s)	55, 135, 318, 896, 943, 946, 1016, 1138
MfeI	CAATTG	1 cut(s)	1514
MflI	RGATCY	2 cut(s)	1792, 1810
MhlI	GDGCHC	2 cut(s)	603, 1384
MluCI	AATT	7 cut(s)	100, 133, 215, 309, 364, 571, 1514
MlyI	GAGTC	2 cut(s)	1001, 1406
MmeI	TCCRAC	6 cut(s)	468, 570, 620, 717, 731, 1351
Mph1103I	ATGCAT	1 cut(s)	1456
MroXI	GAANNNNTTC	1 cut(s)	1500
MseI	TTAA	6 cut(s)	188, 248, 465, 672, 824, 896
MslI	CAYNNNNRTG	1 cut(s)	1822
MspA1I	CMGCKG	1 cut(s)	1750
MspCI	CTTAAG	1 cut(s)	247
MspI	CCGG	1 cut(s)	731
MspR9I	CCNGG	1 cut(s)	1840
MunI	CAATTG	1 cut(s)	1514
Mva1269I	GAATGC	2 cut(s)	94, 1734
MvaI	CCWGG	1 cut(s)	1840
MvnI	CGCG	2 cut(s)	714, 716
MwoI	GCNNNNNNNGC	6 cut(s)	173, 607, 713, 814, 1076, 1478
NdeI	CATATG	1 cut(s)	1106
NdeII	GATC	3 cut(s)	721, 1792, 1810
NlaIV	GGNNCC	4 cut(s)	194, 922, 1446, 1812
NmuCI	GTSAC	2 cut(s)	231, 1694
NsbI	TGCGCA	1 cut(s)	684
NsiI	ATGCAT	1 cut(s)	1456
NspI	RCATGY	5 cut(s)	1145, 1485, 1588, 1639, 1788
PaeI	GCATGC	1 cut(s)	1639
PaeR7I	CTCGAG	1 cut(s)	1009
PciI	ACATGT	2 cut(s)	1141, 1584
PcsI	WCGNNNNNNNCGW	1 cut(s)	283
PctI	GAATGC	2 cut(s)	94, 1734
PdmI	GAANNNNTTC	1 cut(s)	1500
PfeI	GAWTC	3 cut(s)	535, 1519, 1648
PflMI	CCANNNNNTGG	1 cut(s)	32
PkrI	GCNGC	1 cut(s)	169
PleI	GAGTC	2 cut(s)	1001, 1405
PpsI	GAGTC	2 cut(s)	1001, 1405
Ppu21I	YACGTR	1 cut(s)	351
PpuMI	RGGWCCY	1 cut(s)	192
PscI	ACATGT	2 cut(s)	1141, 1584
PshAI	GACNNNNGTC	1 cut(s)	1396
PshBI	ATTAAT	1 cut(s)	465
Psp124BI	GAGCTC	1 cut(s)	603
Psp5II	RGGWCCY	1 cut(s)	192
Psp6I	CCWGG	1 cut(s)	1838
PspGI	CCWGG	1 cut(s)	1838
PspN4I	GGNNCC	4 cut(s)	194, 922, 1446, 1812
PspPI	GGNCC	3 cut(s)	192, 453, 1836
PspPPI	RGGWCCY	1 cut(s)	192
PsuI	RGATCY	2 cut(s)	1792, 1810
PvuII	CAGCTG	1 cut(s)	1750
RsaI	GTAC	2 cut(s)	473, 1270
RsaNI	GTAC	2 cut(s)	472, 1269
RseI	CAYNNNNRTG	1 cut(s)	1822
SacI	GAGCTC	1 cut(s)	603
SaqAI	TTAA	6 cut(s)	188, 248, 465, 672, 824, 896
SatI	GCNGC	1 cut(s)	168
Sau3AI	GATC	3 cut(s)	721, 1792, 1810
Sau96I	GGNCC	3 cut(s)	192, 453, 1836
ScaI	AGTACT	1 cut(s)	1270
SchI	GAGTC	2 cut(s)	1001, 1406
ScrFI	CCNGG	1 cut(s)	1840
SduI	GDGCHC	2 cut(s)	603, 1384
SfaNI	GCATC	3 cut(s)	199, 717, 1176
Sfr274I	CTCGAG	1 cut(s)	1009
SinI	GGWCC	3 cut(s)	192, 453, 1836
SlaI	CTCGAG	1 cut(s)	1009
SmiMI	CAYNNNNRTG	1 cut(s)	1822
SmlI	CTYRAG	5 cut(s)	247, 475, 869, 1009, 1796
SmoI	CTYRAG	5 cut(s)	247, 475, 869, 1009, 1796
SnaBI	TACGTA	1 cut(s)	351
SphI	GCATGC	1 cut(s)	1639
Sse9I	AATT	7 cut(s)	100, 133, 215, 309, 364, 571, 1514
SsiI	CCGC	3 cut(s)	456, 861, 1834
SspMI	CTAG	2 cut(s)	1262, 1274
SstI	GAGCTC	1 cut(s)	603
StyD4I	CCNGG	1 cut(s)	1838
TaaI	ACNGT	7 cut(s)	231, 856, 912, 1048, 1694, 1700, 1774
TaiI	ACGT	1 cut(s)	353
TaqI	TCGA	5 cut(s)	420, 1010, 1117, 1245, 1726
TaqII	GACCGA	2 cut(s)	267, 1231
TasI	AATT	7 cut(s)	100, 133, 215, 309, 364, 571, 1514
TatI	WGTACW	1 cut(s)	1268
TfiI	GAWTC	3 cut(s)	535, 1519, 1648
Tru1I	TTAA	6 cut(s)	188, 248, 465, 672, 824, 896
Tru9I	TTAA	6 cut(s)	188, 248, 465, 672, 824, 896
TscAI	CASTG	3 cut(s)	1099, 1703, 1786
TseFI	GTSAC	2 cut(s)	231, 1694
TseI	GCWGC	1 cut(s)	167
Tsp45I	GTSAC	2 cut(s)	231, 1694
TspDTI	ATGAA	6 cut(s)	302, 392, 510, 1139, 1455, 1806
TspGWI	ACGGA	2 cut(s)	1625, 1660
TspRI	CASTG	3 cut(s)	1099, 1703, 1786
Van91I	CCANNNNNTGG	1 cut(s)	32
Vha464I	CTTAAG	1 cut(s)	247
VneI	GTGCAC	1 cut(s)	1380
VpaK11BI	GGWCC	3 cut(s)	192, 453, 1836
VspI	ATTAAT	1 cut(s)	465
XapI	RAATTY	4 cut(s)	100, 215, 309, 571
XceI	RCATGY	5 cut(s)	1145, 1485, 1588, 1639, 1788
XcmI	CCANNNNNNNNNTGG	2 cut(s)	970, 1561
XhoI	CTCGAG	1 cut(s)	1009
XmnI	GAANNNNTTC	1 cut(s)	1500
XspI	CTAG	2 cut(s)	1262, 1274
ZrmI	AGTACT	1 cut(s)	1270
Zsp2I	ATGCAT	1 cut(s)	1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.