MD15G1366400.v1.1
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0013685
Physical Location & Seq
Forward (+)
44508137 .. 44509285
1149 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1366400.v1.1.491

Sequence Viewer

Length: 1149 bp
ATGATAACCCAGATTAACAAAAAGCTAATCTTACTCTCACTAACCTCAGTTGAGCTACACAAACCCCCTCTCTGCCACTCAATCTCGCTCTTGTTCTACTCTTCCTCCCGACTCGAAAAGCCGAAATCAAAATCCAAAGTATCTGTAGCTGAATACTTAATCACCCAACACCAGTTTTCCCCAGAAGCCGCTTTGAAAGCCGCATCAACAATCGCTTTTCTGAAAAGCCCTGCAGATTCTAGTTCGGTGATTTCGTTTCTCAGAGAAAGCGGCTTCTCGAAGACCCATATGGAAGATGTGATTAAAAGGGTCCCCAGGATTCTAACTTCCAATCTTGACACCGTCCTCAAACCCAAATTCAAGGTTTTCCAGGACTTGGGCTTTTCGGATTCCGACATTGTTGATATTGTGTCCTCTGACCCCTGGATTCTGTGGCGAAGTGTCGATAATAGGCTTGGCCCTTCTCTGTTGGTGCTGAAGAACATTCTCGGATCAAATGCTCGTGTGCTCAAGGCTTTAAAGTTGCCCGGGTGGTTTCTTAAATATGACTTGGAGAAGACAATGATGTCCAATGTTGAGGTCTTACAGAGTTATGGTATAAAATTGCCACAGATTATCAAATACATTTTTCAGTTTCCAAGGTTTTTTGTGCATAAGCCGGAGAGTATTGTGGATGTTGTTAAAAGGGTTGACGAGATGGGTTTTGATATGAAGTCCAAGAGGTTCCTATCAGCAATTCGGATCATGACTTCGCTGACTGTGGATACATGGGAACGGAAGGTGAAGCTTTTCAAGAGTTTGGGGCTTTCAGAAGATGATATCTCGGCGGTTTTTAGAAGGGTACCTCAGGTGTTTGCGGTATCTGAGAACAAGATTAAGGAGGTTACAGAGTTGCTACTCAGCACCGGCAAGTTTGATATCTCGTTTGTAGTTAATCGCCCAGAATTGCTTATTTATAGTGTCGAGCACAGGCTGAAACCACGTCTACGAGTTATGGAGATCCTCGAAAAGAAAAAACTACTTGGGAAAACACCTAATTTGATCACAATCTGCAAATACTCTAAACAGAAGTTTGCTGAGTTATATGTTAGTCCTTATGCAAATGAACTTGAAGGAAGAGTGCATGGAAAGGAAATCATGATCTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

383

Amino Acids

43.66

Weight (kDa)

9.7

Isoelectric Point (pI)

35.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 84 - 238 1.1e-18 mTERF
mTERF PF02536 158 - 359 2.1e-21 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013685)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g37740 FvH4_5g37740 FvH4_5g37740
malus_domestica MD08G1180700.v1.1 MD15G1366400.v1.1
prunus_persica Prupe.1G514300_v2.0.a1 Prupe.7G221900_v2.0.a1
pyrus_communis pycom08g15450
rosa_chinensis RchiOBHm_Chr7g0239481
rosa_laevigata RLG00000000754
rosa_multiflora Rmu_sc0003379.1_g000006
rosa_roxburghii Rroxscaffold_3G00220900
rosa_rugosa Rorug07G0328200
rosa_samantha Rh7AG481700 Rh7BG454600 Rh7CG499700 Rh7DG467800
rosa_wichuraiana Rw7G040360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 565
Acc65I GGTACC 1 cut(s) 841
AccB1I GGYRCC 1 cut(s) 841
AccB7I CCANNNNNTGG 1 cut(s) 376
AccI GTMKAC 1 cut(s) 985
AciI CCGC 5 cut(s) 189, 201, 270, 827, 857
AclWI GGATC 3 cut(s) 499, 749, 994
AcsI RAATTY 1 cut(s) 356
AcuI CTGAAG 1 cut(s) 497
AfaI GTAC 1 cut(s) 843
AfiI CCNNNNNNNGG 1 cut(s) 376
AgsI TTSAA 4 cut(s) 196, 361, 793, 1112
AjiI CACGTC 1 cut(s) 983
AjnI CCWGG 3 cut(s) 314, 369, 422
AluBI AGCT 4 cut(s) 25, 55, 149, 787
AluI AGCT 4 cut(s) 25, 55, 149, 787
Alw21I GWGCWC 2 cut(s) 510, 969
AlwI GGATC 3 cut(s) 499, 749, 994
Ama87I CYCGRG 1 cut(s) 527
AoxI GGCC 1 cut(s) 457
ApoI RAATTY 1 cut(s) 356
Asp700I GAANNNNTTC 1 cut(s) 788
Asp718I GGTACC 1 cut(s) 841
AspS9I GGNCC 2 cut(s) 310, 458
AsuC2I CCSGG 2 cut(s) 528, 529
AsuHPI GGTGA 3 cut(s) 154, 259, 793
AvaI CYCGRG 1 cut(s) 527
AvaII GGWCC 1 cut(s) 310
AxyI CCTNAGG 1 cut(s) 846
BanI GGYRCC 1 cut(s) 841
BauI CACGAG 1 cut(s) 501
BbsI GAAGAC 2 cut(s) 287, 563
Bbv12I GWGCWC 2 cut(s) 510, 969
BccI CCATC 1 cut(s) 691
BciT130I CCWGG 3 cut(s) 316, 371, 424
BciVI GTATCC 1 cut(s) 757
BclI TGATCA 1 cut(s) 1041
BcnI CCSGG 2 cut(s) 528, 529
BfaI CTAG 1 cut(s) 240
BfmI CTRYAG 2 cut(s) 144, 231
BfuI GTATCC 1 cut(s) 757
BisI GCNGC 3 cut(s) 189, 201, 271
BlsI GCNGC 3 cut(s) 190, 202, 272
Bme1390I CCNGG 5 cut(s) 316, 371, 424, 528, 529
Bme18I GGWCC 1 cut(s) 310
BmeT110I CYCGRG 1 cut(s) 527
BmgBI CACGTC 1 cut(s) 983
BmgT120I GGNCC 2 cut(s) 310, 458
BmiI GGNNCC 4 cut(s) 311, 312, 725, 843
BmrFI CCNGG 5 cut(s) 316, 371, 424, 528, 529
BmsI GCATC 1 cut(s) 212
BpiI GAAGAC 2 cut(s) 287, 563
BpuEI CTTGAG 1 cut(s) 494
BpuMI CCSGG 2 cut(s) 528, 529
BsaBI GATNNNNATC 1 cut(s) 1046
BsaJI CCNNGG 4 cut(s) 314, 422, 527, 638
BsaXI ACNNNNNCTCC 2 cut(s) 89, 119
Bsc4I CCNNNNNNNGG 1 cut(s) 376
Bse118I RCCGGY 1 cut(s) 905
Bse1I ACTGG 1 cut(s) 172
Bse21I CCTNAGG 1 cut(s) 846
Bse8I GATNNNNATC 1 cut(s) 1046
BseBI CCWGG 3 cut(s) 316, 371, 424
BseDI CCNNGG 4 cut(s) 314, 422, 527, 638
BseGI GGATG 1 cut(s) 679
BseJI GATNNNNATC 1 cut(s) 1046
BseLI CCNNNNNNNGG 1 cut(s) 376
BseMII CTCAG 6 cut(s) 60, 274, 855, 860, 913, 1068
BseNI ACTGG 1 cut(s) 172
BshFI GGCC 1 cut(s) 459
BshNI GGYRCC 1 cut(s) 841
BsiHKAI GWGCWC 2 cut(s) 510, 969
BsiHKCI CYCGRG 1 cut(s) 527
BsiSI CCGG 3 cut(s) 528, 659, 906
BslFI GGGAC 1 cut(s) 296
BslI CCNNNNNNNGG 1 cut(s) 376
BsmFI GGGAC 1 cut(s) 296
BsnI GGCC 1 cut(s) 459
BsoBI CYCGRG 1 cut(s) 527
Bsp1286I GDGCHC 2 cut(s) 510, 969
Bsp143I GATC 5 cut(s) 491, 741, 999, 1041, 1140
BspACI CCGC 5 cut(s) 189, 201, 270, 827, 857
BspANI GGCC 1 cut(s) 459
BspCNI CTCAG 6 cut(s) 59, 273, 856, 859, 912, 1069
BspHI TCATGA 2 cut(s) 744, 1137
BspLI GGNNCC 4 cut(s) 311, 312, 725, 843
BspMAI CTGCAG 1 cut(s) 235
BspPI GGATC 3 cut(s) 499, 749, 994
BspT107I GGYRCC 1 cut(s) 841
BsrFI RCCGGY 1 cut(s) 905
BsrI ACTGG 1 cut(s) 172
BssAI RCCGGY 1 cut(s) 905
BssECI CCNNGG 4 cut(s) 314, 422, 527, 638
BssMI GATC 5 cut(s) 491, 741, 999, 1041, 1140
BssSI CACGAG 1 cut(s) 501
BssT1I CCWWGG 1 cut(s) 638
Bst2BI CACGAG 1 cut(s) 501
Bst2UI CCWGG 3 cut(s) 316, 371, 424
Bst4CI ACNGT 2 cut(s) 343, 760
Bst6I CTCTTC 2 cut(s) 106, 1111
BstDEI CTNAG 6 cut(s) 46, 260, 846, 864, 899, 1077
BstF5I GGATG 1 cut(s) 679
BstKTI GATC 5 cut(s) 494, 744, 1002, 1044, 1143
BstMBI GATC 5 cut(s) 491, 741, 999, 1041, 1140
BstMWI GCNNNNNNNGC 1 cut(s) 197
BstNI CCWGG 3 cut(s) 316, 371, 424
BstSCI CCNGG 5 cut(s) 314, 369, 422, 526, 527
BstSFI CTRYAG 2 cut(s) 144, 231
BstV2I GAAGAC 2 cut(s) 287, 563
BstX2I RGATCY 1 cut(s) 999
BstYI RGATCY 1 cut(s) 999
Bsu36I CCTNAGG 1 cut(s) 846
BsuI GTATCC 1 cut(s) 757
BsuRI GGCC 1 cut(s) 459
BtrI CACGTC 1 cut(s) 983
BtsCI GGATG 1 cut(s) 679
CciI TCATGA 2 cut(s) 744, 1137
Cfr10I RCCGGY 1 cut(s) 905
Cfr13I GGNCC 2 cut(s) 310, 458
Cfr9I CCCGGG 1 cut(s) 527
Csp6I GTAC 1 cut(s) 842
CviAII CATG 4 cut(s) 745, 768, 1124, 1138
CviQI GTAC 1 cut(s) 842
DdeI CTNAG 6 cut(s) 46, 260, 846, 864, 899, 1077
DpnI GATC 5 cut(s) 493, 743, 1001, 1043, 1142
DpnII GATC 5 cut(s) 491, 741, 999, 1041, 1140
DraI TTTAAA 1 cut(s) 519
DrdI GACNNNNNNGTC 1 cut(s) 565
DseDI GACNNNNNNGTC 1 cut(s) 565
Eam1104I CTCTTC 2 cut(s) 106, 1111
EarI CTCTTC 2 cut(s) 106, 1111
Eco130I CCWWGG 1 cut(s) 638
Eco32I GATATC 2 cut(s) 820, 919
Eco47I GGWCC 1 cut(s) 310
Eco57I CTGAAG 1 cut(s) 497
Eco81I CCTNAGG 1 cut(s) 846
Eco88I CYCGRG 1 cut(s) 527
EcoO109I RGGNCCY 1 cut(s) 310
EcoRII CCWGG 3 cut(s) 314, 369, 422
EcoRV GATATC 2 cut(s) 820, 919
EcoT14I CCWWGG 1 cut(s) 638
ErhI CCWWGG 1 cut(s) 638
FaeI CATG 4 cut(s) 748, 771, 1127, 1141
FalI AAGNNNNNCTT 2 cut(s) 14, 46
FaqI GGGAC 1 cut(s) 296
FatI CATG 4 cut(s) 744, 767, 1123, 1137
FauNDI CATATG 1 cut(s) 288
FbaI TGATCA 1 cut(s) 1041
FblI GTMKAC 1 cut(s) 985
Fnu4HI GCNGC 3 cut(s) 189, 201, 271
FokI GGATG 1 cut(s) 686
Fsp4HI GCNGC 3 cut(s) 189, 201, 271
FspBI CTAG 1 cut(s) 240
GluI GCNGC 3 cut(s) 189, 201, 271
HaeIII GGCC 1 cut(s) 459
HapII CCGG 3 cut(s) 528, 659, 906
Hin1II CATG 4 cut(s) 748, 771, 1127, 1141
HincII GTYRAC 1 cut(s) 691
HindII GTYRAC 1 cut(s) 691
HindIII AAGCTT 1 cut(s) 785
HinfI GANTC 5 cut(s) 111, 236, 319, 389, 427
HpaII CCGG 3 cut(s) 528, 659, 906
HphI GGTGA 3 cut(s) 154, 259, 793
Hpy166II GTNNAC 2 cut(s) 691, 986
Hpy188I TCNGA 9 cut(s) 222, 263, 388, 394, 418, 491, 741, 811, 865
Hpy188III TCNNGA 7 cut(s) 108, 277, 335, 745, 793, 1138, 1146
Hpy8I GTNNAC 2 cut(s) 691, 986
HpyAV CCTTC 4 cut(s) 471, 772, 831, 1106
HpyCH4III ACNGT 2 cut(s) 343, 760
HpyCH4IV ACGT 1 cut(s) 982
HpyCH4V TGCA 5 cut(s) 233, 652, 1053, 1100, 1123
HpyF10VI GCNNNNNNNGC 1 cut(s) 197
HpyF3I CTNAG 6 cut(s) 46, 260, 846, 864, 899, 1077
HpySE526I ACGT 1 cut(s) 982
Hsp92II CATG 4 cut(s) 748, 771, 1127, 1141
KflI GGGWCCC 1 cut(s) 310
KpnI GGTACC 1 cut(s) 845
Ksp22I TGATCA 1 cut(s) 1041
Kzo9I GATC 5 cut(s) 491, 741, 999, 1041, 1140
LweI GCATC 1 cut(s) 212
MaeI CTAG 1 cut(s) 240
MaeII ACGT 1 cut(s) 982
MaeIII GTNAC 1 cut(s) 883
MalI GATC 5 cut(s) 493, 743, 1001, 1043, 1142
MboI GATC 5 cut(s) 491, 741, 999, 1041, 1140
MboII GAAGA 7 cut(s) 93, 292, 305, 490, 568, 824, 1128
MflI RGATCY 1 cut(s) 999
MhlI GDGCHC 2 cut(s) 510, 969
MluCI AATT 5 cut(s) 356, 602, 735, 944, 1036
MlyI GAGTC 1 cut(s) 105
MmeI TCCRAC 1 cut(s) 417
MroXI GAANNNNTTC 1 cut(s) 788
MseI TTAA 8 cut(s) 15, 158, 303, 518, 540, 681, 876, 933
MspI CCGG 3 cut(s) 528, 659, 906
MspR9I CCNGG 5 cut(s) 316, 371, 424, 528, 529
MvaI CCWGG 3 cut(s) 316, 371, 424
MwoI GCNNNNNNNGC 1 cut(s) 197
NciI CCSGG 2 cut(s) 528, 529
NdeI CATATG 1 cut(s) 288
NdeII GATC 5 cut(s) 491, 741, 999, 1041, 1140
NlaIII CATG 4 cut(s) 748, 771, 1127, 1141
NlaIV GGNNCC 4 cut(s) 311, 312, 725, 843
NmeAIII GCCGAG 1 cut(s) 803
PagI TCATGA 2 cut(s) 744, 1137
PcsI WCGNNNNNNNCGW 1 cut(s) 251
PdmI GAANNNNTTC 1 cut(s) 788
PfeI GAWTC 4 cut(s) 236, 319, 389, 427
PflFI GACNNNGTC 1 cut(s) 341
PflMI CCANNNNNTGG 1 cut(s) 376
PfoI TCCNGGA 1 cut(s) 369
PkrI GCNGC 3 cut(s) 190, 202, 272
PleI GAGTC 1 cut(s) 105
PpsI GAGTC 1 cut(s) 105
PpuMI RGGWCCY 1 cut(s) 310
Psp5II RGGWCCY 1 cut(s) 310
Psp6I CCWGG 3 cut(s) 314, 369, 422
PspGI CCWGG 3 cut(s) 314, 369, 422
PspN4I GGNNCC 4 cut(s) 311, 312, 725, 843
PspPI GGNCC 2 cut(s) 310, 458
PspPPI RGGWCCY 1 cut(s) 310
PstI CTGCAG 1 cut(s) 235
PsuI RGATCY 1 cut(s) 999
PsyI GACNNNGTC 1 cut(s) 341
RsaI GTAC 1 cut(s) 843
RsaNI GTAC 1 cut(s) 842
SaqAI TTAA 8 cut(s) 15, 158, 303, 518, 540, 681, 876, 933
SatI GCNGC 3 cut(s) 189, 201, 271
Sau3AI GATC 5 cut(s) 491, 741, 999, 1041, 1140
Sau96I GGNCC 2 cut(s) 310, 458
SchI GAGTC 1 cut(s) 105
ScrFI CCNGG 5 cut(s) 316, 371, 424, 528, 529
SduI GDGCHC 2 cut(s) 510, 969
SfaNI GCATC 1 cut(s) 212
SfcI CTRYAG 2 cut(s) 144, 231
SinI GGWCC 1 cut(s) 310
SmaI CCCGGG 1 cut(s) 529
SmlI CTYRAG 1 cut(s) 509
SmoI CTYRAG 1 cut(s) 509
Sse9I AATT 5 cut(s) 356, 602, 735, 944, 1036
SsiI CCGC 5 cut(s) 189, 201, 270, 827, 857
SspMI CTAG 1 cut(s) 240
StyD4I CCNGG 5 cut(s) 314, 369, 422, 526, 527
StyI CCWWGG 1 cut(s) 638
TaaI ACNGT 2 cut(s) 343, 760
TaiI ACGT 1 cut(s) 985
TaqI TCGA 5 cut(s) 114, 278, 444, 963, 1005
TasI AATT 5 cut(s) 356, 602, 735, 944, 1036
TauI GCSGC 3 cut(s) 191, 203, 273
TfiI GAWTC 4 cut(s) 236, 319, 389, 427
Tru1I TTAA 8 cut(s) 15, 158, 303, 518, 540, 681, 876, 933
Tru9I TTAA 8 cut(s) 15, 158, 303, 518, 540, 681, 876, 933
TspDTI ATGAA 2 cut(s) 725, 1119
TspGWI ACGGA 1 cut(s) 790
TspMI CCCGGG 1 cut(s) 527
Tth111I GACNNNGTC 1 cut(s) 341
Van91I CCANNNNNTGG 1 cut(s) 376
VpaK11BI GGWCC 1 cut(s) 310
XapI RAATTY 1 cut(s) 356
XmaI CCCGGG 1 cut(s) 527
XmiI GTMKAC 1 cut(s) 985
XmnI GAANNNNTTC 1 cut(s) 788
XspI CTAG 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.