Prupe.1G514300_v2.0.a1
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013685
Physical Location & Seq
Forward (+)
42323606 .. 42325386
1781 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G514300.1

Sequence Viewer

Length: 1149 bp
ATGAACAAAAGGCTAATCTCACTCTCATTCTCTCTGAGAAGCTCGGTCCAGCTTCACAGGCCTCCTCTCTACCACTCAATCTCTATCTTGTTTTACTCTTCCTCCAAACCCAAAAGGTCAAAGTTTAACTTTGTCTCCAAAGACGGAAGGTCAAAATCAACGCCCAAAGTAGCAGTAGCTGAATATTTAATCAACCAGCACCAGTTTTCCCCAGAAACTGCTTTGAAAGCCTCATCATCCATCGCTTTTCTTAAAAATACCTCCGAGACGGATTCGGTGCTTTCATTCCTAAAAGAACGCGGATTCTCCAAAACCCAGCTAGAGGAAGTGGTTAAAAGGATCCCGAGGATCCTTCGTGCCAATCTTGACACGACCATCAAACCCAAAATCAAGATTTTCCAAGACTCTGGCTTTTCAGACTCCGACATTGCGGATGTTATATCCTCTTACCCCTGGATTTTATGGAATAGTGCTGATAATCGGCTTGGTCCTGCTATTTTAGCATTGAAGAACATTCTGGGCTCCAATGCTGGTGTGCTTAAGGTTTTAAAGTTATGTGGTTGGTATCTCAAATATGACTTGGAGAAGACAATGATTCCCAATATTGAGATTTTGAAGAGTTTGGGTATAAGTTCGTCGCAGATTGTCAAATACATTTGTCAGTTTCCCAGATTTTATCTGCATACGCAGGAGAGCATTATGGATTTTGTTAGAAGGGTTGATGAAATGGGTTTCGATAGGAAGTCCAAGATGTTCCTATCAGCAATTCGGACCATTAGTTCGATGAGTTTGGAGACCTGGGAAATGAAGGTGAAGCTTTTCCAGAGTTTGGGGTTTTCAGAAAAGGGTGTCTTGGTGGCGTTTAGGAGGGCTCCCCAGGTGTTTTGTATATCTGAGAAGAAGATTAAGGAGGCAACAGAGATGCTGCTCAGCTCTGGCAAGGCTGATATCGCATTTATAGTTAGTCACCCAGAGTTGCTTATTTGTAGCGTTGAGCACAGGCTGAAACCACGACTACAAGTTATGGAGAACCTAGAAAAGAAAAATCTACTTAGGAAAATACCTAGTTTGACCACAATCTGCAGGTACACTGATCAGAAGTTTGCTGAAAGATTTGTTATTCCTTATGCAAATGAACTTGAGGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

383

Amino Acids

43.67

Weight (kDa)

9.71

Isoelectric Point (pI)

41.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013685)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g37740 FvH4_5g37740 FvH4_5g37740
malus_domestica MD08G1180700.v1.1 MD15G1366400.v1.1
prunus_persica Prupe.1G514300_v2.0.a1 Prupe.7G221900_v2.0.a1
pyrus_communis pycom08g15450
rosa_chinensis RchiOBHm_Chr7g0239481
rosa_laevigata RLG00000000754
rosa_multiflora Rmu_sc0003379.1_g000006
rosa_roxburghii Rroxscaffold_3G00220900
rosa_rugosa Rorug07G0328200
rosa_samantha Rh7AG481700 Rh7BG454600 Rh7CG499700 Rh7DG467800
rosa_wichuraiana Rw7G040360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1074
AccB7I CCANNNNNTGG 1 cut(s) 829
AccII CGCG 1 cut(s) 300
AciI CCGC 2 cut(s) 300, 431
AclWI GGATC 4 cut(s) 334, 343, 347, 356
AfaI GTAC 1 cut(s) 1088
AfiI CCNNNNNNNGG 2 cut(s) 322, 829
AflII CTTAAG 1 cut(s) 539
AgsI TTSAA 3 cut(s) 226, 508, 616
AhdI GACNNNNNGTC 1 cut(s) 148
AjnI CCWGG 3 cut(s) 452, 797, 876
AloI GAACNNNNNNTCC 2 cut(s) 763, 795
AluBI AGCT 6 cut(s) 42, 52, 179, 319, 817, 933
AluI AGCT 6 cut(s) 42, 52, 179, 319, 817, 933
Alw21I GWGCWC 1 cut(s) 999
Alw26I GTCTC 3 cut(s) 139, 260, 788
AlwI GGATC 4 cut(s) 334, 343, 347, 356
AlwNI CAGNNNCTG 2 cut(s) 179, 218
Ama87I CYCGRG 1 cut(s) 343
AoxI GGCC 1 cut(s) 59
ApeKI GCWGC 1 cut(s) 925
ArsI GACNNNNNNTTYG 2 cut(s) 763, 795
Asp700I GAANNNNTTC 1 cut(s) 818
AspS9I GGNCC 3 cut(s) 46, 488, 771
AsuHPI GGTGA 2 cut(s) 823, 959
AvaI CYCGRG 1 cut(s) 343
AvaII GGWCC 3 cut(s) 46, 488, 771
BamHI GGATCC 2 cut(s) 339, 348
BanII GRGCYC 2 cut(s) 524, 874
BbsI GAAGAC 1 cut(s) 593
Bbv12I GWGCWC 1 cut(s) 999
BbvI GCAGC 1 cut(s) 912
BccI CCATC 2 cut(s) 248, 383
BciT130I CCWGG 3 cut(s) 454, 799, 878
BclI TGATCA 1 cut(s) 1093
BcoDI GTCTC 3 cut(s) 139, 260, 788
BfaI CTAG 3 cut(s) 320, 1034, 1065
BfmI CTRYAG 1 cut(s) 1081
BfrI CTTAAG 1 cut(s) 539
BfuAI ACCTGC 1 cut(s) 1074
BisI GCNGC 1 cut(s) 926
BlpI GCTNAGC 1 cut(s) 929
BlsI GCNGC 1 cut(s) 927
Bme1390I CCNGG 3 cut(s) 454, 799, 878
Bme18I GGWCC 3 cut(s) 46, 488, 771
BmeRI GACNNNNNGTC 1 cut(s) 148
BmeT110I CYCGRG 1 cut(s) 343
BmgT120I GGNCC 3 cut(s) 46, 488, 771
BmiI GGNNCC 4 cut(s) 341, 350, 523, 873
BmrFI CCNGG 3 cut(s) 454, 799, 878
BmsI GCATC 1 cut(s) 912
BpiI GAAGAC 1 cut(s) 593
Bpu1102I GCTNAGC 1 cut(s) 929
BsaI GGTCTC 1 cut(s) 788
BsaJI CCNNGG 4 cut(s) 344, 452, 798, 876
BsaXI ACNNNNNCTCC 4 cut(s) 86, 116, 119, 149
Bsc4I CCNNNNNNNGG 2 cut(s) 322, 829
Bse1I ACTGG 1 cut(s) 202
Bse3DI GCAATG 1 cut(s) 426
BseBI CCWGG 3 cut(s) 454, 799, 878
BseDI CCNNGG 4 cut(s) 344, 452, 798, 876
BseGI GGATG 2 cut(s) 236, 439
BseLI CCNNNNNNNGG 2 cut(s) 322, 829
BseMI GCAATG 1 cut(s) 426
BseMII CTCAG 3 cut(s) 26, 885, 943
BseNI ACTGG 1 cut(s) 202
BseRI GAGGAG 1 cut(s) 54
BseXI GCAGC 1 cut(s) 912
BseYI CCCAGC 1 cut(s) 315
Bsh1236I CGCG 1 cut(s) 300
BshFI GGCC 1 cut(s) 61
BsiHKAI GWGCWC 1 cut(s) 999
BsiHKCI CYCGRG 1 cut(s) 343
BslI CCNNNNNNNGG 2 cut(s) 322, 829
BsmAI GTCTC 3 cut(s) 139, 260, 788
BsmBI CGTCTC 1 cut(s) 260
BsnI GGCC 1 cut(s) 61
Bso31I GGTCTC 1 cut(s) 788
BsoBI CYCGRG 1 cut(s) 343
Bsp1286I GDGCHC 3 cut(s) 524, 874, 999
Bsp143I GATC 3 cut(s) 339, 348, 1093
Bsp1720I GCTNAGC 1 cut(s) 929
BspACI CCGC 2 cut(s) 300, 431
BspANI GGCC 1 cut(s) 61
BspCNI CTCAG 3 cut(s) 27, 886, 942
BspFNI CGCG 1 cut(s) 300
BspLI GGNNCC 4 cut(s) 341, 350, 523, 873
BspMAI CTGCAG 1 cut(s) 1085
BspMI ACCTGC 1 cut(s) 1074
BspPI GGATC 4 cut(s) 334, 343, 347, 356
BspTI CTTAAG 1 cut(s) 539
BspTNI GGTCTC 1 cut(s) 788
BsrDI GCAATG 1 cut(s) 426
BsrI ACTGG 1 cut(s) 202
BssECI CCNNGG 4 cut(s) 344, 452, 798, 876
BssMI GATC 3 cut(s) 339, 348, 1093
Bst2UI CCWGG 3 cut(s) 454, 799, 878
Bst6I CTCTTC 2 cut(s) 103, 611
BstAFI CTTAAG 1 cut(s) 539
BstDEI CTNAG 4 cut(s) 35, 894, 929, 1052
BstF5I GGATG 2 cut(s) 236, 439
BstFNI CGCG 1 cut(s) 300
BstKTI GATC 3 cut(s) 342, 351, 1096
BstMAI GTCTC 3 cut(s) 139, 260, 788
BstMBI GATC 3 cut(s) 339, 348, 1093
BstMWI GCNNNNNNNGC 4 cut(s) 58, 227, 500, 950
BstNI CCWGG 3 cut(s) 454, 799, 878
BstSCI CCNGG 3 cut(s) 452, 797, 876
BstSFI CTRYAG 1 cut(s) 1081
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 1 cut(s) 912
BstV2I GAAGAC 1 cut(s) 593
BstX2I RGATCY 2 cut(s) 339, 348
BstXI CCANNNNNNTGG 1 cut(s) 407
BstYI RGATCY 2 cut(s) 339, 348
BsuRI GGCC 1 cut(s) 61
BtgZI GCGATG 1 cut(s) 226
BtsCI GGATG 2 cut(s) 236, 439
BtsIMutI CAGTG 1 cut(s) 1089
BveI ACCTGC 1 cut(s) 1074
CaiI CAGNNNCTG 2 cut(s) 179, 218
Cfr13I GGNCC 3 cut(s) 46, 488, 771
Csp6I GTAC 1 cut(s) 1087
CviQI GTAC 1 cut(s) 1087
DdeI CTNAG 4 cut(s) 35, 894, 929, 1052
DpnI GATC 3 cut(s) 341, 350, 1095
DpnII GATC 3 cut(s) 339, 348, 1093
DraI TTTAAA 1 cut(s) 549
DriI GACNNNNNGTC 1 cut(s) 148
Eam1104I CTCTTC 2 cut(s) 103, 611
Eam1105I GACNNNNNGTC 1 cut(s) 148
EarI CTCTTC 2 cut(s) 103, 611
Eco147I AGGCCT 1 cut(s) 61
Eco24I GRGCYC 2 cut(s) 524, 874
Eco31I GGTCTC 1 cut(s) 788
Eco32I GATATC 1 cut(s) 949
Eco47I GGWCC 3 cut(s) 46, 488, 771
Eco88I CYCGRG 1 cut(s) 343
EcoRII CCWGG 3 cut(s) 452, 797, 876
EcoRV GATATC 1 cut(s) 949
EcoT38I GRGCYC 2 cut(s) 524, 874
Esp3I CGTCTC 1 cut(s) 260
FalI AAGNNNNNCTT 4 cut(s) 113, 145, 836, 868
FbaI TGATCA 1 cut(s) 1093
Fnu4HI GCNGC 1 cut(s) 926
FokI GGATG 2 cut(s) 223, 446
FriOI GRGCYC 2 cut(s) 524, 874
Fsp4HI GCNGC 1 cut(s) 926
FspBI CTAG 3 cut(s) 320, 1034, 1065
GluI GCNGC 1 cut(s) 926
GsaI CCCAGC 1 cut(s) 319
HaeIII GGCC 1 cut(s) 61
HindIII AAGCTT 1 cut(s) 815
HinfI GANTC 5 cut(s) 272, 303, 404, 419, 595
HphI GGTGA 2 cut(s) 823, 959
Hpy166II GTNNAC 1 cut(s) 1089
Hpy188I TCNGA 8 cut(s) 36, 265, 418, 424, 771, 841, 895, 1098
Hpy188III TCNNGA 4 cut(s) 343, 365, 391, 823
Hpy8I GTNNAC 1 cut(s) 1089
Hpy99I CGWCG 1 cut(s) 640
HpyAV CCTTC 4 cut(s) 141, 362, 708, 802
HpyCH4V TGCA 3 cut(s) 682, 1083, 1130
HpyF10VI GCNNNNNNNGC 4 cut(s) 58, 227, 500, 950
HpyF3I CTNAG 4 cut(s) 35, 894, 929, 1052
Ksp22I TGATCA 1 cut(s) 1093
Kzo9I GATC 3 cut(s) 339, 348, 1093
LmnI GCTCC 2 cut(s) 527, 877
Lsp1109I GCAGC 1 cut(s) 912
LweI GCATC 1 cut(s) 912
MaeI CTAG 3 cut(s) 320, 1034, 1065
MaeIII GTNAC 1 cut(s) 965
MalI GATC 3 cut(s) 341, 350, 1095
MboI GATC 3 cut(s) 339, 348, 1093
MboII GAAGA 6 cut(s) 90, 520, 598, 628, 910, 913
MflI RGATCY 2 cut(s) 339, 348
MhlI GDGCHC 3 cut(s) 524, 874, 999
MluCI AATT 1 cut(s) 765
MlyI GAGTC 2 cut(s) 398, 413
MmeI TCCRAC 1 cut(s) 447
MroXI GAANNNNTTC 1 cut(s) 818
MseI TTAA 7 cut(s) 126, 188, 252, 333, 540, 548, 906
MspCI CTTAAG 1 cut(s) 539
MspR9I CCNGG 3 cut(s) 454, 799, 878
MvaI CCWGG 3 cut(s) 454, 799, 878
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 4 cut(s) 58, 227, 500, 950
NdeII GATC 3 cut(s) 339, 348, 1093
NlaIV GGNNCC 4 cut(s) 341, 350, 523, 873
NmuCI GTSAC 1 cut(s) 965
PceI AGGCCT 1 cut(s) 61
PdmI GAANNNNTTC 1 cut(s) 818
PfeI GAWTC 3 cut(s) 272, 303, 595
PflMI CCANNNNNTGG 1 cut(s) 829
PkrI GCNGC 1 cut(s) 927
PleI GAGTC 2 cut(s) 398, 413
PpsI GAGTC 2 cut(s) 398, 413
Psp6I CCWGG 3 cut(s) 452, 797, 876
PspFI CCCAGC 1 cut(s) 315
PspGI CCWGG 3 cut(s) 452, 797, 876
PspN4I GGNNCC 4 cut(s) 341, 350, 523, 873
PspPI GGNCC 3 cut(s) 46, 488, 771
PstI CTGCAG 1 cut(s) 1085
PstNI CAGNNNCTG 2 cut(s) 179, 218
PsuI RGATCY 2 cut(s) 339, 348
RsaI GTAC 1 cut(s) 1088
RsaNI GTAC 1 cut(s) 1087
SaqAI TTAA 7 cut(s) 126, 188, 252, 333, 540, 548, 906
SatI GCNGC 1 cut(s) 926
Sau3AI GATC 3 cut(s) 339, 348, 1093
Sau96I GGNCC 3 cut(s) 46, 488, 771
SchI GAGTC 2 cut(s) 398, 413
ScrFI CCNGG 3 cut(s) 454, 799, 878
SduI GDGCHC 3 cut(s) 524, 874, 999
SfaNI GCATC 1 cut(s) 912
SfcI CTRYAG 1 cut(s) 1081
SinI GGWCC 3 cut(s) 46, 488, 771
SmlI CTYRAG 2 cut(s) 539, 1139
SmoI CTYRAG 2 cut(s) 539, 1139
Sse9I AATT 1 cut(s) 765
SseBI AGGCCT 1 cut(s) 61
SsiI CCGC 2 cut(s) 300, 431
SspI AATATT 2 cut(s) 185, 604
SspMI CTAG 3 cut(s) 320, 1034, 1065
StuI AGGCCT 1 cut(s) 61
StyD4I CCNGG 3 cut(s) 452, 797, 876
TaqI TCGA 2 cut(s) 735, 782
TaqII GACCGA 1 cut(s) 34
TasI AATT 1 cut(s) 765
TfiI GAWTC 3 cut(s) 272, 303, 595
Tru1I TTAA 7 cut(s) 126, 188, 252, 333, 540, 548, 906
Tru9I TTAA 7 cut(s) 126, 188, 252, 333, 540, 548, 906
TscAI CASTG 1 cut(s) 1096
TseFI GTSAC 1 cut(s) 965
TseI GCWGC 1 cut(s) 925
Tsp45I GTSAC 1 cut(s) 965
TspDTI ATGAA 5 cut(s) 17, 273, 738, 821, 1149
TspGWI ACGGA 2 cut(s) 159, 284
TspRI CASTG 1 cut(s) 1096
Van91I CCANNNNNTGG 1 cut(s) 829
Vha464I CTTAAG 1 cut(s) 539
VpaK11BI GGWCC 3 cut(s) 46, 488, 771
XmnI GAANNNNTTC 1 cut(s) 818
XspI CTAG 3 cut(s) 320, 1034, 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.