Prupe.7G221900_v2.0.a1
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0013685
Physical Location & Seq
Reverse (-)
19812923 .. 19814803
1881 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G221900.1

Sequence Viewer

Length: 1053 bp
ATGATAACCCAGATGAACAAAAGGCTAATCTCACTCTCATTCTCTCTGAGAAGCTCGGTCCAGCTTCACAGGCCTCCTCTTTACCACTCAATATCTCTCTTGTTTTACTCTTCCTCCGATCCCAAAAGGTCAAAATCAAAATCAAAGCCCAAAGTAGCAGTAGCTGAATATCTAATCAACCAGCACCAGTTTTCCCCAGAAGCCGCTTTAAAAGCCTCATCAACCATTGCTTTTCTTCGAAGTACCCCAGAATCGGATTCGGTGCTTTCATTTCTCAAGGAAAGCGGTTTCTCCAAAATCCATCTGGAGGAAGTAGTTAAAAGGGTCCCGGGGATTCTTCGTGCCAATCTTGACACGGCCATCAAACCCAAAATCAAACTTTTGCAAGACTCTGGCTTTTCAGACTCCGACATCGCCGATCTTATATCCTCAGACCCCTGGATTTTAAGGCGGAGTGTCGATAAAGGGCTTGGCCCTGCTATTTTAGTGTTGAAGAACATTCTGGGTTCTAATGCAGATGTGCTTAAGGTTTTAAAGTTATCTGCTTGGTATCTCAAATATGACTTGGAGAAGACATTGATGCCCAATATTGAGGTTTTAAAGAGTTTGGGTATAACTTCGTCGCAGATTGTCAAATACATTTTTCTTTTTCCGAGATTCTTTCTGCATAAGCAGGAGAGCATTATGGGTTTTGTTAAAAGGGTTGATGAAATGGGTTTTGATAGGAAGTCCAAGATGTTCCTATACGCTATTCGGATCATGAGTTCGATGACTTTGGAGACCTGGGAACTGAAGGTGAAGCTCTTCCAGAGTTTGGGGTTTTCGGAAAACGATATCTTGGTGGTGTTTAGGAGGGCTCCCCAGGTGTTTGCTACGTCTGAGAAGAAGATTAAGGAGGCAATAGAAATGCTGCTTAGCTCTGGCAAGGAAGAGTTTATATTTTCTTGGGAAGCGCATGGAAGGAAAGGATATAGAAAGGCCATGATTGTTTTTGAGGTATTTTCTTTTGGGCACTCGTGTTTCCTTCTATTAATCTTTGTAAGAAAGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

351

Amino Acids

39.93

Weight (kDa)

9.79

Isoelectric Point (pI)

49.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013685)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g37740 FvH4_5g37740 FvH4_5g37740
malus_domestica MD08G1180700.v1.1 MD15G1366400.v1.1
prunus_persica Prupe.1G514300_v2.0.a1 Prupe.7G221900_v2.0.a1
pyrus_communis pycom08g15450
rosa_chinensis RchiOBHm_Chr7g0239481
rosa_laevigata RLG00000000754
rosa_multiflora Rmu_sc0003379.1_g000006
rosa_roxburghii Rroxscaffold_3G00220900
rosa_rugosa Rorug07G0328200
rosa_samantha Rh7AG481700 Rh7BG454600 Rh7CG499700 Rh7DG467800
rosa_wichuraiana Rw7G040360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 814
AciI CCGC 3 cut(s) 204, 285, 451
AclWI GGATC 2 cut(s) 113, 764
AcoI YGGCCR 1 cut(s) 357
AcuI CTGAAG 1 cut(s) 812
AfaI GTAC 1 cut(s) 244
AfiI CCNNNNNNNGG 3 cut(s) 253, 307, 814
AflII CTTAAG 1 cut(s) 524
AgsI TTSAA 1 cut(s) 493
AjnI CCWGG 3 cut(s) 437, 782, 861
AloI GAACNNNNNNTCC 2 cut(s) 748, 780
AluBI AGCT 5 cut(s) 54, 64, 164, 802, 918
AluI AGCT 5 cut(s) 54, 64, 164, 802, 918
Alw26I GTCTC 1 cut(s) 773
AlwI GGATC 2 cut(s) 113, 764
AlwNI CAGNNNCTG 1 cut(s) 164
Ama87I CYCGRG 1 cut(s) 328
AoxI GGCC 4 cut(s) 71, 357, 472, 978
ApeKI GCWGC 1 cut(s) 910
AseI ATTAAT 1 cut(s) 1031
Asp700I GAANNNNTTC 1 cut(s) 803
AspLEI GCGC 1 cut(s) 955
AspS9I GGNCC 3 cut(s) 58, 325, 473
AsuC2I CCSGG 2 cut(s) 329, 330
AsuHPI GGTGA 1 cut(s) 808
AsuII TTCGAA 1 cut(s) 238
AvaI CYCGRG 1 cut(s) 328
AvaII GGWCC 2 cut(s) 58, 325
BaeGI GKGCMC 1 cut(s) 1014
BanII GRGCYC 1 cut(s) 859
BauI CACGAG 1 cut(s) 1015
BbsI GAAGAC 1 cut(s) 578
BbvI GCAGC 1 cut(s) 897
BccI CCATC 2 cut(s) 309, 368
BceAI ACGGC 1 cut(s) 372
BciT130I CCWGG 3 cut(s) 439, 784, 863
BcnI CCSGG 2 cut(s) 329, 330
BcoDI GTCTC 1 cut(s) 773
BfrI CTTAAG 1 cut(s) 524
BisI GCNGC 2 cut(s) 204, 911
BlpI GCTNAGC 1 cut(s) 914
BlsI GCNGC 2 cut(s) 205, 912
Bme1390I CCNGG 5 cut(s) 329, 330, 439, 784, 863
Bme18I GGWCC 2 cut(s) 58, 325
BmeT110I CYCGRG 1 cut(s) 328
BmgT120I GGNCC 3 cut(s) 58, 325, 473
BmiI GGNNCC 3 cut(s) 326, 327, 858
BmrFI CCNGG 5 cut(s) 329, 330, 439, 784, 863
BmsI GCATC 1 cut(s) 570
BpiI GAAGAC 1 cut(s) 578
BpmI CTGGAG 1 cut(s) 326
Bpu1102I GCTNAGC 1 cut(s) 914
Bpu14I TTCGAA 1 cut(s) 238
BpuEI CTTGAG 1 cut(s) 260
BpuMI CCSGG 2 cut(s) 329, 330
BsaI GGTCTC 1 cut(s) 773
BsaJI CCNNGG 5 cut(s) 328, 329, 437, 783, 861
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bsc4I CCNNNNNNNGG 3 cut(s) 253, 307, 814
Bse1I ACTGG 1 cut(s) 187
Bse3DI GCAATG 1 cut(s) 225
BseBI CCWGG 3 cut(s) 439, 784, 863
BseDI CCNNGG 5 cut(s) 328, 329, 437, 783, 861
BseLI CCNNNNNNNGG 3 cut(s) 253, 307, 814
BseMI GCAATG 1 cut(s) 225
BseMII CTCAG 3 cut(s) 38, 444, 870
BseNI ACTGG 1 cut(s) 187
BseRI GAGGAG 1 cut(s) 66
BseSI GKGCMC 1 cut(s) 1014
BseXI GCAGC 1 cut(s) 897
BshFI GGCC 4 cut(s) 73, 359, 474, 980
BsiHKCI CYCGRG 1 cut(s) 328
BsiSI CCGG 1 cut(s) 329
BslFI GGGAC 1 cut(s) 311
BslI CCNNNNNNNGG 3 cut(s) 253, 307, 814
BsmAI GTCTC 1 cut(s) 773
BsmFI GGGAC 1 cut(s) 311
BsnI GGCC 4 cut(s) 73, 359, 474, 980
Bso31I GGTCTC 1 cut(s) 773
BsoBI CYCGRG 1 cut(s) 328
Bsp119I TTCGAA 1 cut(s) 238
Bsp1286I GDGCHC 2 cut(s) 859, 1014
Bsp143I GATC 3 cut(s) 118, 418, 756
Bsp1720I GCTNAGC 1 cut(s) 914
BspACI CCGC 3 cut(s) 204, 285, 451
BspANI GGCC 4 cut(s) 73, 359, 474, 980
BspCNI CTCAG 3 cut(s) 39, 443, 871
BspHI TCATGA 1 cut(s) 759
BspLI GGNNCC 3 cut(s) 326, 327, 858
BspPI GGATC 2 cut(s) 113, 764
BspQI GCTCTTC 1 cut(s) 809
BspT104I TTCGAA 1 cut(s) 238
BspTI CTTAAG 1 cut(s) 524
BspTNI GGTCTC 1 cut(s) 773
BsrDI GCAATG 1 cut(s) 225
BsrI ACTGG 1 cut(s) 187
BssECI CCNNGG 5 cut(s) 328, 329, 437, 783, 861
BssMI GATC 3 cut(s) 118, 418, 756
BssSI CACGAG 1 cut(s) 1015
Bst2BI CACGAG 1 cut(s) 1015
Bst2UI CCWGG 3 cut(s) 439, 784, 863
Bst6I CTCTTC 3 cut(s) 115, 809, 924
BstAFI CTTAAG 1 cut(s) 524
BstBI TTCGAA 1 cut(s) 238
BstDEI CTNAG 4 cut(s) 47, 430, 879, 914
BstHHI GCGC 1 cut(s) 955
BstKTI GATC 3 cut(s) 121, 421, 759
BstMAI GTCTC 1 cut(s) 773
BstMBI GATC 3 cut(s) 118, 418, 756
BstMWI GCNNNNNNNGC 2 cut(s) 70, 212
BstNI CCWGG 3 cut(s) 439, 784, 863
BstSCI CCNGG 5 cut(s) 327, 328, 437, 782, 861
BstSLI GKGCMC 1 cut(s) 1014
BstV1I GCAGC 1 cut(s) 897
BstV2I GAAGAC 1 cut(s) 578
BsuRI GGCC 4 cut(s) 73, 359, 474, 980
BtgZI GCGATG 1 cut(s) 397
CaiI CAGNNNCTG 1 cut(s) 164
CciI TCATGA 1 cut(s) 759
CfoI GCGC 1 cut(s) 955
Cfr13I GGNCC 3 cut(s) 58, 325, 473
Cfr9I CCCGGG 1 cut(s) 328
Csp6I GTAC 1 cut(s) 243
CviAII CATG 3 cut(s) 760, 956, 982
CviQI GTAC 1 cut(s) 243
DdeI CTNAG 4 cut(s) 47, 430, 879, 914
DpnI GATC 3 cut(s) 120, 420, 758
DpnII GATC 3 cut(s) 118, 418, 756
DraI TTTAAA 3 cut(s) 210, 534, 600
EaeI YGGCCR 1 cut(s) 357
Eam1104I CTCTTC 3 cut(s) 115, 809, 924
EarI CTCTTC 3 cut(s) 115, 809, 924
EciI GGCGGA 1 cut(s) 466
Eco147I AGGCCT 1 cut(s) 73
Eco24I GRGCYC 1 cut(s) 859
Eco31I GGTCTC 1 cut(s) 773
Eco32I GATATC 1 cut(s) 835
Eco47I GGWCC 2 cut(s) 58, 325
Eco57I CTGAAG 1 cut(s) 812
Eco88I CYCGRG 1 cut(s) 328
EcoO109I RGGNCCY 1 cut(s) 325
EcoRII CCWGG 3 cut(s) 437, 782, 861
EcoRV GATATC 1 cut(s) 835
EcoT38I GRGCYC 1 cut(s) 859
FaeI CATG 3 cut(s) 763, 959, 985
FaqI GGGAC 1 cut(s) 311
FatI CATG 3 cut(s) 759, 955, 981
Fnu4HI GCNGC 2 cut(s) 204, 911
FriOI GRGCYC 1 cut(s) 859
Fsp4HI GCNGC 2 cut(s) 204, 911
GlaI GCGC 1 cut(s) 954
GluI GCNGC 2 cut(s) 204, 911
GsuI CTGGAG 1 cut(s) 326
HaeIII GGCC 4 cut(s) 73, 359, 474, 980
HapII CCGG 1 cut(s) 329
HhaI GCGC 1 cut(s) 955
Hin1II CATG 3 cut(s) 763, 959, 985
Hin6I GCGC 1 cut(s) 953
HinP1I GCGC 1 cut(s) 953
HinfI GANTC 6 cut(s) 251, 257, 334, 389, 404, 657
HpaII CCGG 1 cut(s) 329
HphI GGTGA 1 cut(s) 808
Hpy188III TCNNGA 4 cut(s) 305, 350, 760, 808
Hpy99I CGWCG 1 cut(s) 625
HpyAV CCTTC 3 cut(s) 787, 954, 1034
HpyCH4IV ACGT 1 cut(s) 875
HpyCH4V TGCA 3 cut(s) 385, 515, 667
HpyF10VI GCNNNNNNNGC 2 cut(s) 70, 212
HpyF3I CTNAG 4 cut(s) 47, 430, 879, 914
HpySE526I ACGT 1 cut(s) 875
Hsp92II CATG 3 cut(s) 763, 959, 985
HspAI GCGC 1 cut(s) 953
KflI GGGWCCC 1 cut(s) 325
Kzo9I GATC 3 cut(s) 118, 418, 756
LguI GCTCTTC 1 cut(s) 809
LmnI GCTCC 1 cut(s) 862
Lsp1109I GCAGC 1 cut(s) 897
LweI GCATC 1 cut(s) 570
MaeII ACGT 1 cut(s) 875
MalI GATC 3 cut(s) 120, 420, 758
MboI GATC 3 cut(s) 118, 418, 756
MboII GAAGA 9 cut(s) 102, 227, 329, 505, 583, 796, 895, 898, 941
MhlI GDGCHC 2 cut(s) 859, 1014
MlyI GAGTC 2 cut(s) 383, 398
MmeI TCCRAC 1 cut(s) 432
MroXI GAANNNNTTC 1 cut(s) 803
MseI TTAA 9 cut(s) 209, 318, 446, 525, 533, 599, 696, 891, 1031
MspCI CTTAAG 1 cut(s) 524
MspI CCGG 1 cut(s) 329
MspR9I CCNGG 5 cut(s) 329, 330, 439, 784, 863
MvaI CCWGG 3 cut(s) 439, 784, 863
MwoI GCNNNNNNNGC 2 cut(s) 70, 212
NciI CCSGG 2 cut(s) 329, 330
NdeII GATC 3 cut(s) 118, 418, 756
NlaIII CATG 3 cut(s) 763, 959, 985
NlaIV GGNNCC 3 cut(s) 326, 327, 858
NspV TTCGAA 1 cut(s) 238
PagI TCATGA 1 cut(s) 759
PceI AGGCCT 1 cut(s) 73
PciSI GCTCTTC 1 cut(s) 809
PdmI GAANNNNTTC 1 cut(s) 803
PfeI GAWTC 4 cut(s) 251, 257, 334, 657
PflMI CCANNNNNTGG 1 cut(s) 814
PkrI GCNGC 2 cut(s) 205, 912
PleI GAGTC 2 cut(s) 383, 398
PpsI GAGTC 2 cut(s) 383, 398
PpuMI RGGWCCY 1 cut(s) 325
PshBI ATTAAT 1 cut(s) 1031
Psp5II RGGWCCY 1 cut(s) 325
Psp6I CCWGG 3 cut(s) 437, 782, 861
PspGI CCWGG 3 cut(s) 437, 782, 861
PspN4I GGNNCC 3 cut(s) 326, 327, 858
PspPI GGNCC 3 cut(s) 58, 325, 473
PspPPI RGGWCCY 1 cut(s) 325
PstNI CAGNNNCTG 1 cut(s) 164
RsaI GTAC 1 cut(s) 244
RsaNI GTAC 1 cut(s) 243
SapI GCTCTTC 1 cut(s) 809
SaqAI TTAA 9 cut(s) 209, 318, 446, 525, 533, 599, 696, 891, 1031
SatI GCNGC 2 cut(s) 204, 911
Sau3AI GATC 3 cut(s) 118, 418, 756
Sau96I GGNCC 3 cut(s) 58, 325, 473
SchI GAGTC 2 cut(s) 383, 398
ScrFI CCNGG 5 cut(s) 329, 330, 439, 784, 863
SduI GDGCHC 2 cut(s) 859, 1014
SfaNI GCATC 1 cut(s) 570
SfuI TTCGAA 1 cut(s) 238
SinI GGWCC 2 cut(s) 58, 325
SmaI CCCGGG 1 cut(s) 330
SmlI CTYRAG 2 cut(s) 275, 524
SmoI CTYRAG 2 cut(s) 275, 524
SseBI AGGCCT 1 cut(s) 73
SsiI CCGC 3 cut(s) 204, 285, 451
SspI AATATT 1 cut(s) 589
StuI AGGCCT 1 cut(s) 73
StyD4I CCNGG 5 cut(s) 327, 328, 437, 782, 861
TaiI ACGT 1 cut(s) 878
TaqI TCGA 3 cut(s) 238, 459, 767
TaqII GACCGA 1 cut(s) 46
TauI GCSGC 1 cut(s) 206
TfiI GAWTC 4 cut(s) 251, 257, 334, 657
Tru1I TTAA 9 cut(s) 209, 318, 446, 525, 533, 599, 696, 891, 1031
Tru9I TTAA 9 cut(s) 209, 318, 446, 525, 533, 599, 696, 891, 1031
TseI GCWGC 1 cut(s) 910
TspDTI ATGAA 3 cut(s) 29, 258, 723
TspMI CCCGGG 1 cut(s) 328
Van91I CCANNNNNTGG 1 cut(s) 814
Vha464I CTTAAG 1 cut(s) 524
VpaK11BI GGWCC 2 cut(s) 58, 325
VspI ATTAAT 1 cut(s) 1031
XcmI CCANNNNNNNNNTGG 1 cut(s) 301
XmaI CCCGGG 1 cut(s) 328
XmnI GAANNNNTTC 1 cut(s) 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.