MD15G1382300.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
47129337 .. 47139162
9826 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1382300.v1.1.491

Sequence Viewer

Length: 3711 bp
ATGTTCACTGAAGGACTTGATAGAAGCGCCCTTCGTTGGGTTAGAGAGAAGGAGGAAGTTCCATTTTCGGGTTCTAATTTGCGGCCTAGGATTGATCCGATTATGCACATTCGCAGTGGTAGTGGCGGCAGGGGGTTTGGACTCCCCCCTCCGTCTAAATTTAGAAGTGGACACTTGCCCTCCAATGCCATACCGGTTCGGACAATTCCAGCTGATGGGGATGAGAGTGGGTCTGCTTCTGATAATGACAGAACCACTGATTCAGAAGATGGAGTTTATGGAGGCAGGTACTCGCTGGATTCGTCACCGCAAGATGATAGGGTTCCCAGTGCTGCTGCTCATAGGTATGGGAAGCCGTCGCAAGGGCAGACCAATTATGGCAGTGATTATACTTATTCAGACGTCAGTTCCTCCATGGACACTGTTGTGGGGAGACAGAAACCTGTGGCAGAGAGATTGGTGAGGGGAGCGAGGAAGTATCCAGTCGCGCAGAATGGTTATACGGAGGACGAGTCATCTGATTCGGCTGCAAGCTCCGAGTTTTCTACTTCACAAGCCGGAGGAAGCATCAAGAGTGGGTTGCCTCATAATAAAGCCTATGCTTCTGAGGGTTATGCCTCAAGTGCACCTTCACGTAGGAACTTGGAAAGTGCTGCTGAAAAGAATTTGCATTCCACAAACCTGCAGAGTAAAAAATTTCCTGATGACGATGTTCCCAGTGCACCACCCTTTTGTGGTGCAACTCAGGAAATTAAACAGGATGATGAGAAAAGTCCTACTAGAGTGCATAGGACACCGCGTGCTACTTCTCCATCTGAATTCAAAACAACCCCTGGTAAAAAGCAGGATGGCGTTACTGGAAATGGGAATCTTGAACACTTTGCAAGAACTACAACTAGTTCTGAAGCTGCTGCGCCATCATGCCCAGCTCGGCTCCCAACATATTATGCAAGTGCTCTAGGGCCATGGCATGGTGTTATTGCATATGATGCATGTGTGCGTTTGTGCCTTCATGCTTGGGCAATGGAATGCATGGAAGCTCCCATGTTCTTGGAAAATGAATGTGCTCTTCTACGAGATGCATTTAGTTTACGACAAGTGCTTTTACAATCAGAGGAAGAACTGTTGGCAAAGCAGACTTCAGAGCTTGCAAGTGAGAAAGCTGTTCCGAAACCAAAGAAAATTGTTGGCAAGATGAAAGTGCAAGTGCGCAGAATTAAAATGGGCCTGGACCCACCTACTGGCTGCAGTATTTCGTCTATAAGACCACCAGTAATCAAACTGGAATCCATTCGTCATCATCTCTCCAGCTTCCAGTCTACAATTGCTTCTGGATGGCAAGCCCTTCGAAAGATTCGAGTTGCACCTCGGGTACCTGCAAATGGTTCTTTTTCACGTCAAAGCTTGGCGTATGTGCATGCTGGTACTCAGTATATAAAACAGGTGTCTGGACTTTTGAAAACTGGTGTAACAAGTCTACGAGACAGTTCGTCCTCATATGAAGTTGTGCATGAAACGTACTCTTGTTTGTTAAGACTGAAAAGTTCAACTGAAGAAGATGCCATCAAGATGCAACCTGGATCCAGTGAAACTCATGTCTTCTTTCCAGATAGTTTGGGAGATGATCTAATAGTCGAAGTCTTTGATTCGAAGGGAAAGCATTTTGGTAGAGTCATTGTTCAAGTGGCAACAGTTGTTGATGACCCAGCTGACAAGCAACGCTGGTTCTCTGTCTATCGTGAACCAGAACATGAACCTGTGGGAAAGATGCAGCTATCTACATATTATTCAACAAGTTCAGATGACAATCCCAAGTGTGGCTCTGTTGCAGAAACGGTTGCATATGACCTTGTTTTAGAAGCTGCTATGAAGGTTCAGCATTTTCAACAAAGGAATCTAGTGGTGCAGGGTCCATGGAAATGGCTTTTAATTGAGTTTGCAACATATTACGGTGTTTCTGATGTATACACCAAGCTGAGGTATCTCTCTTATGTTATGGATGTAGCTACACCAACAGCTGATTGCCTCAACTTGGTGTACGATTTGCTAAGGCCTGTTTTGATGAAAGGCCACAACAAGAGCATGCTGAGTCACCAAGAGAACCGAATCTTAGGAGAAACTAAGGATCAGATTCAACAAACTCTTGCTCTAGCTTTCGAGAATTACAAGTCCTTGGATGAGTCATCTCTTTCAGGAATTATGGAGGTCTTTCGACCTGCGACTGGGCATGCTGCACCTGCATTGGAGCCTGCTGTCAAACTTTACACGCTTCTTCATGATATCTTGTCTCCCGAGGCGCAGACTGCTTTATGCCACCATTTCCAGGTTGCTGCGAGAAAGAGATCACAGAGGCACTTAGCTGAGACAGATGAATATATTACCAGCAATAGCGATGGTATATTGCTTGATAGTTTGAGTATGGCGACTGCTTACCAGAAAATGAAATCTTTGTGCCTTAACATTAGGGATGAAATCCACACTGATATTGAGATCCATAATCGGCATATACTCCCCAGTTTTGTAGACCTCCCACATCTGTCAGCATCAATATACAGCACAGACCTATGCAGTAGATTGCGTGCTTTCCTCATTGCTTGCCCCCCAACGGGTCCTTCATCCCCTGTAGGGGACCTTGTTATAGCCACAGCAGATTTCCAAAGAGACCTTTCCAGTTGGAACATCGGTCATATTAAAGCTGGAGTTGATGCAAAAGAATTGTTCCACCTCTATATTATGCTGTGGATTCAAAATAAGCGTGGGTCTTTGCTCGAAGCATGCAAATTAGACAAGGTAAAATGGTCAGGAGTTAGGACACAGCATTCAACAACTCCTTTTGTGGATGAAATGTATGATCGTCTGAAAGCAACTTTGAGTGACTATGAGATCATCATTTCCAGATGGCCTGAATATGCCTGCATTCTGGAGAATGCTATTGCTGATGTCGAGAAGGCGATCATAGAATCTCTAGACAAGCAGTATGCAGACGTCCTGTCACCATTAAAGGAAAATTTGGCCCCAAAGAAATTTGGCCTCAAGTATGTTCAGAAGCTTGCCAAAAGGTCTGTGAGCGCCTATACAGTCCCTGAAGAGTTGGGAATTCTGTTGAATTCGTTGAAGAGAATGCTTGATGTCCTTCGTCCCCAAATCGAAGTGCAGTTCAAATCATGGGGTTCCTGCATTCCGGATGCTGGGAACACAGTTCCTGGAGAGCGTCTCAGTGAAGTCACTGTAATGTTGAGAGCCAAGTTAAAAAATTACATACAAGCAGTTGTTGAAAAACTTGCAGAGAATTCGAAGTTGCAGAGTGCTACAAAACTGAAGAAGATTCTGCAAGATTCAAAAGAAACCGTGGTAGAATCTGATGTGAGAAGTAGAATGCAGCTTCTTAAAGACCAGCTGGCAACCACAGTTACTCACCTGCATACTGTTTTTGGGACTCACGTCTTCATTGCAATTTGTCGAGGTTATTGGGACCGAATGGGACAGGATGTTCTGAGTTTCTTAGAGAACCGAAAAGAAAATAAGTCGTGGTATAAGGGTTCTCGCATCGCTGTCTCTATTCTGGATGATACATTTGCATCACAGATGCAGCAGCTGTTGGGGAACACACTGCAGGAGAAGGACGTGCAGCCTCCTAGATCCATAATGGAAGTCCGGTCTATTCTTTGCAAGGATGCTGCCAATCTGAAGGACAATACCTACTATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1237

Amino Acids

137.44

Weight (kDa)

7.38

Isoelectric Point (pI)

53.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2245, 3426
AatII GACGTC 2 cut(s) 405, 2988
Acc16I TGCGCA 1 cut(s) 1211
Acc36I ACCTGC 6 cut(s) 276, 690, 1384, 2224, 2245, 3426
Acc65I GGTACC 1 cut(s) 1372
AccB1I GGYRCC 1 cut(s) 1372
AccB7I CCANNNNNTGG 3 cut(s) 215, 971, 1241
AccI GTMKAC 4 cut(s) 1319, 1477, 1965, 2523
AccII CGCG 2 cut(s) 488, 799
AccIII TCCGGA 1 cut(s) 3181
AciI CCGC 4 cut(s) 82, 126, 308, 797
AclWI GGATC 6 cut(s) 89, 1575, 1588, 2133, 2485, 3633
AcsI RAATTY 9 cut(s) 158, 664, 695, 818, 3007, 3023, 3096, 3106, 3289
AcuI CTGAAG 7 cut(s) 30, 924, 1125, 1572, 3105, 3338, 3707
AcyI GRCGYC 2 cut(s) 402, 2985
AdeI CACNNNGTG 1 cut(s) 800
AfaI GTAC 5 cut(s) 290, 1374, 1426, 1520, 2039
AgeI ACCGGT 1 cut(s) 193
AhdI GACNNNNNGTC 2 cut(s) 1489, 2989
AhlI ACTAGT 1 cut(s) 896
AjiI CACGTC 3 cut(s) 1397, 3442, 3625
AjnI CCWGG 5 cut(s) 832, 1227, 1576, 2322, 3202
AjuI GAANNNNNNNTTGG 2 cut(s) 2596, 2628
AleI CACNNNNGTG 1 cut(s) 425
AloI GAACNNNNNNTCC 2 cut(s) 3474, 3506
Alw21I GWGCWC 4 cut(s) 628, 724, 958, 1069
Alw26I GTCTC 7 cut(s) 427, 1476, 2292, 2357, 2655, 3218, 3559
Alw44I GTGCAC 2 cut(s) 624, 720
AlwI GGATC 6 cut(s) 89, 1575, 1588, 2133, 2485, 3633
AlwNI CAGNNNCTG 3 cut(s) 3083, 3203, 3595
Ama87I CYCGRG 2 cut(s) 1368, 2291
Aor13HI TCCGGA 1 cut(s) 3181
AoxI GGCC 8 cut(s) 83, 962, 1225, 2051, 2068, 2900, 3012, 3028
ApaLI GTGCAC 2 cut(s) 624, 720
ApoI RAATTY 9 cut(s) 158, 664, 695, 818, 3007, 3023, 3096, 3106, 3289
AsiGI ACCGGT 1 cut(s) 193
Asp700I GAANNNNTTC 1 cut(s) 1290
Asp718I GGTACC 1 cut(s) 1372
AspA2I CCTAGG 1 cut(s) 86
AspLEI GCGC 6 cut(s) 29, 490, 916, 1212, 2299, 3071
AspS9I GGNCC 8 cut(s) 962, 1225, 1231, 1910, 2609, 2629, 3013, 3472
AsuHPI GGTGA 5 cut(s) 297, 472, 2084, 2985, 3407
AsuII TTCGAA 3 cut(s) 1348, 1649, 3293
AvaI CYCGRG 2 cut(s) 1368, 2291
AvaII GGWCC 5 cut(s) 1231, 1910, 2609, 2629, 3472
AvrII CCTAGG 1 cut(s) 86
BaeGI GKGCMC 2 cut(s) 628, 724
BamHI GGATCC 1 cut(s) 1580
BanI GGYRCC 1 cut(s) 1372
BbsI GAAGAC 2 cut(s) 1591, 3436
Bbv12I GWGCWC 4 cut(s) 628, 724, 958, 1069
BbvCI CCTCAGC 1 cut(s) 1976
BccI CCATC 9 cut(s) 209, 263, 820, 842, 925, 1329, 1571, 2387, 2892
BceAI ACGGC 1 cut(s) 340
BcgI CGANNNNNNTGC 4 cut(s) 1328, 1362, 3273, 3307
BciT130I CCWGG 5 cut(s) 834, 1229, 1578, 2324, 3204
BciVI GTATCC 1 cut(s) 489
BcoDI GTCTC 7 cut(s) 427, 1476, 2292, 2357, 2655, 3218, 3559
BcuI ACTAGT 1 cut(s) 896
BfaI CTAG 8 cut(s) 87, 780, 897, 959, 1898, 2150, 2966, 3636
BfmI CTRYAG 4 cut(s) 683, 1246, 2622, 3611
BfoI RGCGCY 2 cut(s) 30, 3072
BfuAI ACCTGC 6 cut(s) 276, 690, 1384, 2224, 2245, 3426
BfuI GTATCC 1 cut(s) 489
BlnI CCTAGG 1 cut(s) 86
Bme1390I CCNGG 5 cut(s) 834, 1229, 1578, 2324, 3204
Bme18I GGWCC 5 cut(s) 1231, 1910, 2609, 2629, 3472
BmeRI GACNNNNNGTC 2 cut(s) 1489, 2989
BmeT110I CYCGRG 2 cut(s) 1368, 2291
BmgBI CACGTC 3 cut(s) 1397, 3442, 3625
BmgT120I GGNCC 8 cut(s) 962, 1225, 1231, 1910, 2609, 2629, 3013, 3472
BmrFI CCNGG 5 cut(s) 834, 1229, 1578, 2324, 3204
BmrI ACTGGG 4 cut(s) 321, 711, 2232, 2508
BmuI ACTGGG 4 cut(s) 321, 711, 2232, 2508
BoxI GACNNNNGTC 1 cut(s) 3440
BpiI GAAGAC 2 cut(s) 1591, 3436
BplI GAGNNNNNCTC 2 cut(s) 3198, 3230
BpmI CTGGAG 4 cut(s) 1291, 2718, 2942, 3225
Bpu10I CCTNAGC 2 cut(s) 1976, 2048
Bpu14I TTCGAA 3 cut(s) 1348, 1649, 3293
BpuEI CTTGAG 2 cut(s) 604, 3017
BsaAI YACGTR 1 cut(s) 635
BsaBI GATNNNNATC 1 cut(s) 1806
BsaHI GRCGYC 2 cut(s) 402, 2985
BsaI GGTCTC 1 cut(s) 2655
BsaJI CCNNGG 9 cut(s) 86, 414, 832, 965, 1367, 1913, 2172, 2292, 3348
BsaWI WCCGGW 3 cut(s) 193, 3181, 3654
BsaXI ACNNNNNCTCC 4 cut(s) 164, 194, 497, 527
Bse118I RCCGGY 1 cut(s) 193
Bse3DI GCAATG 3 cut(s) 1029, 2589, 3447
Bse8I GATNNNNATC 1 cut(s) 1806
BseAI TCCGGA 1 cut(s) 3181
BseBI CCWGG 5 cut(s) 834, 1229, 1578, 2324, 3204
BseDI CCNNGG 9 cut(s) 86, 414, 832, 965, 1367, 1913, 2172, 2292, 3348
BseJI GATNNNNATC 1 cut(s) 1806
BseMI GCAATG 3 cut(s) 1029, 2589, 3447
BseMII CTCAG 8 cut(s) 597, 758, 1442, 1967, 2078, 2352, 3229, 3485
BseSI GKGCMC 2 cut(s) 628, 724
BseYI CCCAGC 3 cut(s) 925, 1705, 3188
BsgI GTGCAG 4 cut(s) 1925, 2217, 3173, 3647
Bsh1236I CGCG 2 cut(s) 488, 799
BshFI GGCC 8 cut(s) 85, 964, 1227, 2053, 2070, 2902, 3014, 3030
BshNI GGYRCC 1 cut(s) 1372
BshTI ACCGGT 1 cut(s) 193
BsiHKAI GWGCWC 4 cut(s) 628, 724, 958, 1069
BsiHKCI CYCGRG 2 cut(s) 1368, 2291
BsiSI CCGG 4 cut(s) 194, 558, 3182, 3655
BslFI GGGAC 6 cut(s) 2642, 3065, 3123, 3448, 3485, 3495
BsmAI GTCTC 7 cut(s) 427, 1476, 2292, 2357, 2655, 3218, 3559
BsmBI CGTCTC 1 cut(s) 3218
BsmFI GGGAC 6 cut(s) 2642, 3065, 3123, 3448, 3485, 3495
BsmI GAATGC 8 cut(s) 670, 1034, 2818, 2916, 2932, 3126, 3177, 3381
BsnI GGCC 8 cut(s) 85, 964, 1227, 2053, 2070, 2902, 3014, 3030
Bso31I GGTCTC 1 cut(s) 2655
BsoBI CYCGRG 2 cut(s) 1368, 2291
Bsp119I TTCGAA 3 cut(s) 1348, 1649, 3293
Bsp1286I GDGCHC 4 cut(s) 628, 724, 958, 1069
Bsp13I TCCGGA 1 cut(s) 3181
Bsp19I CCATGG 3 cut(s) 414, 965, 1913
BspACI CCGC 4 cut(s) 82, 126, 308, 797
BspANI GGCC 8 cut(s) 85, 964, 1227, 2053, 2070, 2902, 3014, 3030
BspCNI CTCAG 8 cut(s) 598, 757, 1441, 1968, 2079, 2353, 3228, 3486
BspEI TCCGGA 1 cut(s) 3181
BspFNI CGCG 2 cut(s) 488, 799
BspHI TCATGA 1 cut(s) 2275
BspMAI CTGCAG 3 cut(s) 687, 1250, 3615
BspMI ACCTGC 6 cut(s) 276, 690, 1384, 2224, 2245, 3426
BspPI GGATC 6 cut(s) 89, 1575, 1588, 2133, 2485, 3633
BspQI GCTCTTC 1 cut(s) 1074
BspT104I TTCGAA 3 cut(s) 1348, 1649, 3293
BspT107I GGYRCC 1 cut(s) 1372
BspTNI GGTCTC 1 cut(s) 2655
BsrDI GCAATG 3 cut(s) 1029, 2589, 3447
BsrFI RCCGGY 1 cut(s) 193
BssAI RCCGGY 1 cut(s) 193
BssECI CCNNGG 9 cut(s) 86, 414, 832, 965, 1367, 1913, 2172, 2292, 3348
BssNAI GTATAC 1 cut(s) 1966
BssNI GRCGYC 2 cut(s) 402, 2985
BssT1I CCWWGG 5 cut(s) 86, 414, 965, 1913, 2172
Bst1107I GTATAC 1 cut(s) 1966
Bst2UI CCWGG 5 cut(s) 834, 1229, 1578, 2324, 3204
Bst6I CTCTTC 3 cut(s) 1074, 3081, 3110
BstACI GRCGYC 2 cut(s) 402, 2985
BstAPI GCANNNNNTGC 1 cut(s) 989
BstBAI YACGTR 1 cut(s) 635
BstBI TTCGAA 3 cut(s) 1348, 1649, 3293
BstDSI CCRYGG 4 cut(s) 414, 965, 1913, 3348
BstFNI CGCG 2 cut(s) 488, 799
BstH2I RGCGCY 2 cut(s) 30, 3072
BstHHI GCGC 6 cut(s) 29, 490, 916, 1212, 2299, 3071
BstMAI GTCTC 7 cut(s) 427, 1476, 2292, 2357, 2655, 3218, 3559
BstMWI GCNNNNNNNGC 4 cut(s) 623, 989, 2237, 2303
BstNI CCWGG 5 cut(s) 834, 1229, 1578, 2324, 3204
BstNSI RCATGY 5 cut(s) 996, 1421, 2086, 2231, 2778
BstPAI GACNNNNGTC 1 cut(s) 3440
BstSCI CCNGG 5 cut(s) 832, 1227, 1576, 2322, 3202
BstSFI CTRYAG 4 cut(s) 683, 1246, 2622, 3611
BstSLI GKGCMC 2 cut(s) 628, 724
BstUI CGCG 2 cut(s) 488, 799
BstV2I GAAGAC 2 cut(s) 1591, 3436
BstX2I RGATCY 3 cut(s) 1580, 2490, 3638
BstXI CCANNNNNNTGG 2 cut(s) 1051, 1920
BstYI RGATCY 3 cut(s) 1580, 2490, 3638
BstZ17I GTATAC 1 cut(s) 1966
BsuI GTATCC 1 cut(s) 489
BsuRI GGCC 8 cut(s) 85, 964, 1227, 2053, 2070, 2902, 3014, 3030
BtgI CCRYGG 4 cut(s) 414, 965, 1913, 3348
BtgZI GCGATG 2 cut(s) 2406, 3532
BtrI CACGTC 3 cut(s) 1397, 3442, 3625
BtsI GCAGTG 3 cut(s) 121, 388, 3608
BveI ACCTGC 6 cut(s) 276, 690, 1384, 2224, 2245, 3426
CaiI CAGNNNCTG 3 cut(s) 3083, 3203, 3595
CciI TCATGA 1 cut(s) 2275
CfoI GCGC 6 cut(s) 29, 490, 916, 1212, 2299, 3071
Cfr10I RCCGGY 1 cut(s) 193
Cfr13I GGNCC 8 cut(s) 962, 1225, 1231, 1910, 2609, 2629, 3013, 3472
CseI GACGC 1 cut(s) 3200
Csp6I GTAC 5 cut(s) 289, 1373, 1425, 1519, 2038
CspAI ACCGGT 1 cut(s) 193
CviQI GTAC 5 cut(s) 289, 1373, 1425, 1519, 2038
DraIII CACNNNGTG 1 cut(s) 800
DriI GACNNNNNGTC 2 cut(s) 1489, 2989
Eam1104I CTCTTC 3 cut(s) 1074, 3081, 3110
Eam1105I GACNNNNNGTC 2 cut(s) 1489, 2989
EarI CTCTTC 3 cut(s) 1074, 3081, 3110
Eco130I CCWWGG 5 cut(s) 86, 414, 965, 1913, 2172
Eco147I AGGCCT 1 cut(s) 2053
Eco31I GGTCTC 1 cut(s) 2655
Eco32I GATATC 1 cut(s) 2281
Eco47I GGWCC 5 cut(s) 1231, 1910, 2609, 2629, 3472
Eco57I CTGAAG 7 cut(s) 30, 924, 1125, 1572, 3105, 3338, 3707
Eco88I CYCGRG 2 cut(s) 1368, 2291
EcoO109I RGGNCCY 2 cut(s) 2609, 2629
EcoRI GAATTC 4 cut(s) 818, 3096, 3106, 3289
EcoRII CCWGG 5 cut(s) 832, 1227, 1576, 2322, 3202
EcoRV GATATC 1 cut(s) 2281
EcoT14I CCWWGG 5 cut(s) 86, 414, 965, 1913, 2172
EcoT22I ATGCAT 3 cut(s) 994, 1034, 1084
ErhI CCWWGG 5 cut(s) 86, 414, 965, 1913, 2172
Esp3I CGTCTC 1 cut(s) 3218
FalI AAGNNNNNCTT 2 cut(s) 613, 645
FaqI GGGAC 6 cut(s) 2642, 3065, 3123, 3448, 3485, 3495
FauNDI CATATG 3 cut(s) 985, 1498, 1843
FblI GTMKAC 4 cut(s) 1319, 1477, 1965, 2523
FspBI CTAG 8 cut(s) 87, 780, 897, 959, 1898, 2150, 2966, 3636
FspI TGCGCA 1 cut(s) 1211
GlaI GCGC 6 cut(s) 28, 489, 915, 1211, 2298, 3070
GsaI CCCAGC 3 cut(s) 929, 1709, 3192
GsuI CTGGAG 4 cut(s) 1291, 2718, 2942, 3225
HaeII RGCGCY 2 cut(s) 30, 3072
HaeIII GGCC 8 cut(s) 85, 964, 1227, 2053, 2070, 2902, 3014, 3030
HapII CCGG 4 cut(s) 194, 558, 3182, 3655
HgaI GACGC 1 cut(s) 3200
HhaI GCGC 6 cut(s) 29, 490, 916, 1212, 2299, 3071
Hin1I GRCGYC 2 cut(s) 402, 2985
Hin6I GCGC 6 cut(s) 27, 488, 914, 1210, 2297, 3069
HinP1I GCGC 6 cut(s) 27, 488, 914, 1210, 2297, 3069
HindIII AAGCTT 2 cut(s) 1402, 3047
HpaII CCGG 4 cut(s) 194, 558, 3182, 3655
HphI GGTGA 5 cut(s) 297, 472, 2084, 2985, 3407
Hpy99I CGWCG 1 cut(s) 361
HpyCH4IV ACGT 7 cut(s) 402, 634, 1396, 1517, 2985, 3441, 3624
HpyF10VI GCNNNNNNNGC 4 cut(s) 623, 989, 2237, 2303
HpySE526I ACGT 7 cut(s) 402, 634, 1396, 1517, 2985, 3441, 3624
Hsp92I GRCGYC 2 cut(s) 402, 2985
HspAI GCGC 6 cut(s) 27, 488, 914, 1210, 2297, 3069
Kpn2I TCCGGA 1 cut(s) 3181
KpnI GGTACC 1 cut(s) 1376
LguI GCTCTTC 1 cut(s) 1074
LmnI GCTCC 5 cut(s) 467, 539, 939, 1045, 2245
MaeI CTAG 8 cut(s) 87, 780, 897, 959, 1898, 2150, 2966, 3636
MaeII ACGT 7 cut(s) 402, 634, 1396, 1517, 2985, 3441, 3624
MaeIII GTNAC 8 cut(s) 303, 853, 1468, 2090, 2873, 2991, 3223, 3409
MfeI CAATTG 1 cut(s) 1323
MflI RGATCY 3 cut(s) 1580, 2490, 3638
MhlI GDGCHC 4 cut(s) 628, 724, 958, 1069
MlyI GAGTC 6 cut(s) 135, 521, 1680, 2098, 2189, 3430
MmeI TCCRAC 1 cut(s) 2654
Mph1103I ATGCAT 3 cut(s) 994, 1034, 1084
MroI TCCGGA 1 cut(s) 3181
MroXI GAANNNNTTC 1 cut(s) 1290
MseI TTAA 9 cut(s) 753, 1218, 1532, 1928, 2457, 2691, 2999, 3248, 3387
MslI CAYNNNNRTG 5 cut(s) 345, 425, 1568, 1918, 3230
MspA1I CMGCKG 5 cut(s) 212, 1709, 2018, 3397, 3595
MspI CCGG 4 cut(s) 194, 558, 3182, 3655
MspR9I CCNGG 5 cut(s) 834, 1229, 1578, 2324, 3204
MunI CAATTG 1 cut(s) 1323
Mva1269I GAATGC 8 cut(s) 670, 1034, 2818, 2916, 2932, 3126, 3177, 3381
MvaI CCWGG 5 cut(s) 834, 1229, 1578, 2324, 3204
MvnI CGCG 2 cut(s) 488, 799
MwoI GCNNNNNNNGC 4 cut(s) 623, 989, 2237, 2303
NcoI CCATGG 3 cut(s) 414, 965, 1913
NdeI CATATG 3 cut(s) 985, 1498, 1843
NmeAIII GCCGAG 1 cut(s) 910
NmuCI GTSAC 5 cut(s) 303, 2090, 2873, 2991, 3223
NsbI TGCGCA 1 cut(s) 1211
NsiI ATGCAT 3 cut(s) 994, 1034, 1084
NspI RCATGY 5 cut(s) 996, 1421, 2086, 2231, 2778
NspV TTCGAA 3 cut(s) 1348, 1649, 3293
OliI CACNNNNGTG 1 cut(s) 425
PaeI GCATGC 4 cut(s) 1421, 2086, 2231, 2778
PagI TCATGA 1 cut(s) 2275
PaqCI CACCTGC 2 cut(s) 2245, 3426
PceI AGGCCT 1 cut(s) 2053
PciSI GCTCTTC 1 cut(s) 1074
PcsI WCGNNNNNNNCGW 2 cut(s) 299, 1354
PctI GAATGC 8 cut(s) 670, 1034, 2818, 2916, 2932, 3126, 3177, 3381
PdmI GAANNNNTTC 1 cut(s) 1290
PflMI CCANNNNNTGG 3 cut(s) 215, 971, 1241
PfoI TCCNGGA 1 cut(s) 3202
PinAI ACCGGT 1 cut(s) 193
PleI GAGTC 6 cut(s) 135, 520, 1679, 2097, 2188, 3430
PpsI GAGTC 6 cut(s) 135, 520, 1679, 2097, 2188, 3430
Ppu21I YACGTR 1 cut(s) 635
PpuMI RGGWCCY 2 cut(s) 2609, 2629
PshAI GACNNNNGTC 1 cut(s) 3440
Psp5II RGGWCCY 2 cut(s) 2609, 2629
Psp6I CCWGG 5 cut(s) 832, 1227, 1576, 2322, 3202
PspFI CCCAGC 3 cut(s) 925, 1705, 3188
PspGI CCWGG 5 cut(s) 832, 1227, 1576, 2322, 3202
PspPI GGNCC 8 cut(s) 962, 1225, 1231, 1910, 2609, 2629, 3013, 3472
PspPPI RGGWCCY 2 cut(s) 2609, 2629
PstI CTGCAG 3 cut(s) 687, 1250, 3615
PstNI CAGNNNCTG 3 cut(s) 3083, 3203, 3595
PsuI RGATCY 3 cut(s) 1580, 2490, 3638
PvuII CAGCTG 5 cut(s) 212, 1709, 2018, 3397, 3595
RsaI GTAC 5 cut(s) 290, 1374, 1426, 1520, 2039
RsaNI GTAC 5 cut(s) 289, 1373, 1425, 1519, 2038
RseI CAYNNNNRTG 5 cut(s) 345, 425, 1568, 1918, 3230
SapI GCTCTTC 1 cut(s) 1074
SaqAI TTAA 9 cut(s) 753, 1218, 1532, 1928, 2457, 2691, 2999, 3248, 3387
Sau96I GGNCC 8 cut(s) 962, 1225, 1231, 1910, 2609, 2629, 3013, 3472
SchI GAGTC 6 cut(s) 135, 521, 1680, 2098, 2189, 3430
ScrFI CCNGG 5 cut(s) 834, 1229, 1578, 2324, 3204
SduI GDGCHC 4 cut(s) 628, 724, 958, 1069
SfcI CTRYAG 4 cut(s) 683, 1246, 2622, 3611
SfuI TTCGAA 3 cut(s) 1348, 1649, 3293
SinI GGWCC 5 cut(s) 1231, 1910, 2609, 2629, 3472
SmiMI CAYNNNNRTG 5 cut(s) 345, 425, 1568, 1918, 3230
SmlI CTYRAG 2 cut(s) 619, 3032
SmoI CTYRAG 2 cut(s) 619, 3032
SpeI ACTAGT 1 cut(s) 896
SphI GCATGC 4 cut(s) 1421, 2086, 2231, 2778
SseBI AGGCCT 1 cut(s) 2053
SsiI CCGC 4 cut(s) 82, 126, 308, 797
SspMI CTAG 8 cut(s) 87, 780, 897, 959, 1898, 2150, 2966, 3636
StuI AGGCCT 1 cut(s) 2053
StyD4I CCNGG 5 cut(s) 832, 1227, 1576, 2322, 3202
StyI CCWWGG 5 cut(s) 86, 414, 965, 1913, 2172
TaiI ACGT 7 cut(s) 405, 637, 1399, 1520, 2988, 3444, 3627
TaqII GACCGA 2 cut(s) 2672, 3489
TauI GCSGC 2 cut(s) 85, 129
Tru1I TTAA 9 cut(s) 753, 1218, 1532, 1928, 2457, 2691, 2999, 3248, 3387
Tru9I TTAA 9 cut(s) 753, 1218, 1532, 1928, 2457, 2691, 2999, 3248, 3387
TseFI GTSAC 5 cut(s) 303, 2090, 2873, 2991, 3223
Tsp45I GTSAC 5 cut(s) 303, 2090, 2873, 2991, 3223
TspGWI ACGGA 2 cut(s) 141, 518
Van91I CCANNNNNTGG 3 cut(s) 215, 971, 1241
VneI GTGCAC 2 cut(s) 624, 720
VpaK11BI GGWCC 5 cut(s) 1231, 1910, 2609, 2629, 3472
XapI RAATTY 9 cut(s) 158, 664, 695, 818, 3007, 3023, 3096, 3106, 3289
XbaI TCTAGA 1 cut(s) 2965
XceI RCATGY 5 cut(s) 996, 1421, 2086, 2231, 2778
XmaJI CCTAGG 1 cut(s) 86
XmiI GTMKAC 4 cut(s) 1319, 1477, 1965, 2523
XmnI GAANNNNTTC 1 cut(s) 1290
XspI CTAG 8 cut(s) 87, 780, 897, 959, 1898, 2150, 2966, 3636
ZraI GACGTC 2 cut(s) 403, 2986
Zsp2I ATGCAT 3 cut(s) 994, 1034, 1084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.