Belongs to the LDH MDH superfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17260 |
| fragaria_vesca | FvH4_5g00090 |
| malus_domestica | MD16G1010900.v1.1 |
| prunus_persica | Prupe.1G339800_v2.0.a1 Prupe.5G072700_v2.0.a1 Prupe.6G054700_v2.0.a1 |
| pyrus_communis | pycom06g05170 pycom16g01070 |
| rosa_chinensis | RchiOBHm_Chr4g0406091 RchiOBHm_Chr4g0445541 RchiOBHm_Chr7g0202841 |
| rosa_laevigata | RLG00000003568 RLG00000005731 |
| rosa_multiflora | Rmu_co8326923.1_g000001 Rmu_ssc0000253.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00254220 Rroxscaffold_5G00379710 Rroxscaffold_5G00386020 |
| rosa_rugosa | Rorug04G0362400 Rorug07G0073400.1 |
| rosa_samantha | Rh4AG423800 Rh4BG435800 Rh4CG450500 Rh4DG432100 Rh7AG201200 Rh7BG201500 Rh7CG212600 Rh7DG208200 |
| rosa_wichuraiana | Rw4G036320 Rw7G017600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 192, 219 |
| Acc16I | TGCGCA | 1 cut(s) | 942 |
| AccB1I | GGYRCC | 3 cut(s) | 140, 350, 545 |
| AccI | GTMKAC | 2 cut(s) | 213, 800 |
| AccII | CGCG | 2 cut(s) | 90, 237 |
| AclWI | GGATC | 2 cut(s) | 37, 862 |
| AcoI | YGGCCR | 2 cut(s) | 159, 972 |
| AcyI | GRCGYC | 4 cut(s) | 141, 189, 216, 351 |
| AdeI | CACNNNGTG | 1 cut(s) | 877 |
| AfaI | GTAC | 2 cut(s) | 440, 885 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 528, 880 |
| AflIII | ACRYGT | 1 cut(s) | 921 |
| AgsI | TTSAA | 3 cut(s) | 76, 697, 1054 |
| AjiI | CACGTC | 1 cut(s) | 922 |
| AjnI | CCWGG | 5 cut(s) | 51, 374, 500, 563, 834 |
| AluBI | AGCT | 6 cut(s) | 202, 232, 508, 648, 946, 1046 |
| AluI | AGCT | 6 cut(s) | 202, 232, 508, 648, 946, 1046 |
| Alw21I | GWGCWC | 2 cut(s) | 204, 639 |
| Alw26I | GTCTC | 1 cut(s) | 728 |
| AlwI | GGATC | 2 cut(s) | 37, 862 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1009 |
| AoxI | GGCC | 5 cut(s) | 49, 159, 294, 498, 972 |
| ApeKI | GCWGC | 1 cut(s) | 943 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 117, 149 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 747 |
| AspLEI | GCGC | 6 cut(s) | 92, 117, 143, 353, 658, 943 |
| AspS9I | GGNCC | 3 cut(s) | 41, 856, 1039 |
| AsuC2I | CCSGG | 3 cut(s) | 45, 366, 530 |
| AsuHPI | GGTGA | 3 cut(s) | 334, 435, 653 |
| AsuII | TTCGAA | 1 cut(s) | 412 |
| AvaII | GGWCC | 3 cut(s) | 41, 856, 1039 |
| BaeGI | GKGCMC | 1 cut(s) | 548 |
| BalI | TGGCCA | 2 cut(s) | 161, 974 |
| BanI | GGYRCC | 3 cut(s) | 140, 350, 545 |
| BanII | GRGCYC | 1 cut(s) | 204 |
| Bbv12I | GWGCWC | 2 cut(s) | 204, 639 |
| BbvCI | CCTCAGC | 1 cut(s) | 1010 |
| BbvI | GCAGC | 1 cut(s) | 955 |
| BccI | CCATC | 4 cut(s) | 89, 170, 182, 461 |
| BceAI | ACGGC | 1 cut(s) | 296 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 145, 179, 535, 569 |
| BciT130I | CCWGG | 5 cut(s) | 53, 376, 502, 565, 836 |
| BcnI | CCSGG | 3 cut(s) | 45, 366, 530 |
| BcoDI | GTCTC | 1 cut(s) | 728 |
| BfaI | CTAG | 2 cut(s) | 704, 740 |
| BfoI | RGCGCY | 4 cut(s) | 118, 144, 354, 659 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 836 |
| BisI | GCNGC | 6 cut(s) | 238, 264, 267, 428, 828, 944 |
| BlsI | GCNGC | 6 cut(s) | 239, 265, 268, 429, 829, 945 |
| BmcAI | AGTACT | 1 cut(s) | 440 |
| Bme1390I | CCNGG | 8 cut(s) | 45, 53, 366, 376, 502, 530, 565, 836 |
| Bme18I | GGWCC | 3 cut(s) | 41, 856, 1039 |
| BmgBI | CACGTC | 1 cut(s) | 922 |
| BmgT120I | GGNCC | 3 cut(s) | 41, 856, 1039 |
| BmiI | GGNNCC | 7 cut(s) | 42, 142, 325, 352, 547, 569, 857 |
| BmrFI | CCNGG | 8 cut(s) | 45, 53, 366, 376, 502, 530, 565, 836 |
| BmrI | ACTGGG | 1 cut(s) | 47 |
| BmsI | GCATC | 1 cut(s) | 234 |
| BmuI | ACTGGG | 1 cut(s) | 47 |
| BpmI | CTGGAG | 3 cut(s) | 239, 374, 547 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1010 |
| Bpu14I | TTCGAA | 1 cut(s) | 412 |
| BpuEI | CTTGAG | 1 cut(s) | 949 |
| BpuMI | CCSGG | 3 cut(s) | 45, 366, 530 |
| BsaAI | YACGTR | 1 cut(s) | 496 |
| BsaHI | GRCGYC | 4 cut(s) | 141, 189, 216, 351 |
| BsaJI | CCNNGG | 4 cut(s) | 235, 364, 651, 891 |
| BsaWI | WCCGGW | 1 cut(s) | 445 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 675, 705, 906, 936 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 528, 880 |
| Bse118I | RCCGGY | 3 cut(s) | 143, 347, 688 |
| Bse1I | ACTGG | 1 cut(s) | 42 |
| BseBI | CCWGG | 5 cut(s) | 53, 376, 502, 565, 836 |
| BseDI | CCNNGG | 4 cut(s) | 235, 364, 651, 891 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 528, 880 |
| BseMII | CTCAG | 3 cut(s) | 842, 1001, 1061 |
| BseNI | ACTGG | 1 cut(s) | 42 |
| BseRI | GAGGAG | 2 cut(s) | 377, 1010 |
| BseSI | GKGCMC | 1 cut(s) | 548 |
| BseXI | GCAGC | 1 cut(s) | 955 |
| BseYI | CCCAGC | 1 cut(s) | 521 |
| BsgI | GTGCAG | 1 cut(s) | 635 |
| Bsh1236I | CGCG | 2 cut(s) | 90, 237 |
| BshFI | GGCC | 5 cut(s) | 51, 161, 296, 500, 974 |
| BshNI | GGYRCC | 3 cut(s) | 140, 350, 545 |
| BsiHKAI | GWGCWC | 2 cut(s) | 204, 639 |
| BsiSI | CCGG | 7 cut(s) | 44, 144, 348, 366, 446, 529, 689 |
| BslFI | GGGAC | 3 cut(s) | 869, 932, 1028 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 528, 880 |
| BsmAI | GTCTC | 1 cut(s) | 728 |
| BsmFI | GGGAC | 3 cut(s) | 869, 932, 1028 |
| BsnI | GGCC | 5 cut(s) | 51, 161, 296, 500, 974 |
| Bsp119I | TTCGAA | 1 cut(s) | 412 |
| Bsp1286I | GDGCHC | 3 cut(s) | 204, 548, 639 |
| Bsp143I | GATC | 5 cut(s) | 29, 250, 462, 586, 867 |
| BspANI | GGCC | 5 cut(s) | 51, 161, 296, 500, 974 |
| BspCNI | CTCAG | 3 cut(s) | 843, 1002, 1060 |
| BspFNI | CGCG | 2 cut(s) | 90, 237 |
| BspLI | GGNNCC | 7 cut(s) | 42, 142, 325, 352, 547, 569, 857 |
| BspPI | GGATC | 2 cut(s) | 37, 862 |
| BspT104I | TTCGAA | 1 cut(s) | 412 |
| BspT107I | GGYRCC | 3 cut(s) | 140, 350, 545 |
| BsrFI | RCCGGY | 3 cut(s) | 143, 347, 688 |
| BsrI | ACTGG | 1 cut(s) | 42 |
| BssAI | RCCGGY | 3 cut(s) | 143, 347, 688 |
| BssECI | CCNNGG | 4 cut(s) | 235, 364, 651, 891 |
| BssMI | GATC | 5 cut(s) | 29, 250, 462, 586, 867 |
| BssNAI | GTATAC | 1 cut(s) | 801 |
| BssNI | GRCGYC | 4 cut(s) | 141, 189, 216, 351 |
| BssT1I | CCWWGG | 1 cut(s) | 891 |
| Bst1107I | GTATAC | 1 cut(s) | 801 |
| Bst2UI | CCWGG | 5 cut(s) | 53, 376, 502, 565, 836 |
| Bst4CI | ACNGT | 2 cut(s) | 319, 641 |
| BstACI | GRCGYC | 4 cut(s) | 141, 189, 216, 351 |
| BstBAI | YACGTR | 1 cut(s) | 496 |
| BstBI | TTCGAA | 1 cut(s) | 412 |
| BstC8I | GCNNGC | 7 cut(s) | 145, 261, 349, 355, 618, 935, 939 |
| BstDEI | CTNAG | 3 cut(s) | 851, 1010, 1047 |
| BstDSI | CCRYGG | 2 cut(s) | 235, 651 |
| BstFNI | CGCG | 2 cut(s) | 90, 237 |
| BstH2I | RGCGCY | 4 cut(s) | 118, 144, 354, 659 |
| BstHHI | GCGC | 6 cut(s) | 92, 117, 143, 353, 658, 943 |
| BstKTI | GATC | 5 cut(s) | 32, 253, 465, 589, 870 |
| BstMAI | GTCTC | 1 cut(s) | 728 |
| BstMBI | GATC | 5 cut(s) | 29, 250, 462, 586, 867 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 153, 514, 836, 943 |
| BstNI | CCWGG | 5 cut(s) | 53, 376, 502, 565, 836 |
| BstSCI | CCNGG | 8 cut(s) | 43, 51, 364, 374, 500, 528, 563, 834 |
| BstSLI | GKGCMC | 1 cut(s) | 548 |
| BstUI | CGCG | 2 cut(s) | 90, 237 |
| BstV1I | GCAGC | 1 cut(s) | 955 |
| BstX2I | RGATCY | 1 cut(s) | 867 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 292 |
| BstYI | RGATCY | 1 cut(s) | 867 |
| BstZ17I | GTATAC | 1 cut(s) | 801 |
| BsuRI | GGCC | 5 cut(s) | 51, 161, 296, 500, 974 |
| BtgI | CCRYGG | 2 cut(s) | 235, 651 |
| BtgZI | GCGATG | 2 cut(s) | 148, 565 |
| BtrI | CACGTC | 1 cut(s) | 922 |
| BtsIMutI | CAGTG | 2 cut(s) | 35, 987 |
| Cac8I | GCNNGC | 7 cut(s) | 145, 261, 349, 355, 618, 935, 939 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1009 |
| CfoI | GCGC | 6 cut(s) | 92, 117, 143, 353, 658, 943 |
| Cfr10I | RCCGGY | 3 cut(s) | 143, 347, 688 |
| Cfr13I | GGNCC | 3 cut(s) | 41, 856, 1039 |
| Cfr42I | CCGCGG | 1 cut(s) | 238 |
| Csp6I | GTAC | 2 cut(s) | 439, 884 |
| CviAII | CATG | 4 cut(s) | 10, 157, 292, 807 |
| CviQI | GTAC | 2 cut(s) | 439, 884 |
| DdeI | CTNAG | 3 cut(s) | 851, 1010, 1047 |
| DinI | GGCGCC | 2 cut(s) | 142, 352 |
| DpnI | GATC | 5 cut(s) | 31, 252, 464, 588, 869 |
| DpnII | GATC | 5 cut(s) | 29, 250, 462, 586, 867 |
| DraIII | CACNNNGTG | 1 cut(s) | 877 |
| EaeI | YGGCCR | 2 cut(s) | 159, 972 |
| EciI | GGCGGA | 1 cut(s) | 814 |
| Ecl136II | GAGCTC | 1 cut(s) | 202 |
| Eco130I | CCWWGG | 1 cut(s) | 891 |
| Eco147I | AGGCCT | 1 cut(s) | 51 |
| Eco24I | GRGCYC | 1 cut(s) | 204 |
| Eco47I | GGWCC | 3 cut(s) | 41, 856, 1039 |
| Eco53kI | GAGCTC | 1 cut(s) | 202 |
| EcoICRI | GAGCTC | 1 cut(s) | 202 |
| EcoRII | CCWGG | 5 cut(s) | 51, 374, 500, 563, 834 |
| EcoT14I | CCWWGG | 1 cut(s) | 891 |
| EcoT38I | GRGCYC | 1 cut(s) | 204 |
| EgeI | GGCGCC | 2 cut(s) | 142, 352 |
| EheI | GGCGCC | 2 cut(s) | 142, 352 |
| ErhI | CCWWGG | 1 cut(s) | 891 |
| FaeI | CATG | 4 cut(s) | 13, 160, 295, 810 |
| FaqI | GGGAC | 3 cut(s) | 869, 932, 1028 |
| FatI | CATG | 4 cut(s) | 9, 156, 291, 806 |
| FauI | CCCGC | 4 cut(s) | 95, 287, 362, 950 |
| FblI | GTMKAC | 2 cut(s) | 213, 800 |
| Fnu4HI | GCNGC | 6 cut(s) | 238, 264, 267, 428, 828, 944 |
| FriOI | GRGCYC | 1 cut(s) | 204 |
| Fsp4HI | GCNGC | 6 cut(s) | 238, 264, 267, 428, 828, 944 |
| FspBI | CTAG | 2 cut(s) | 704, 740 |
| FspI | TGCGCA | 1 cut(s) | 942 |
| GlaI | GCGC | 6 cut(s) | 91, 116, 142, 352, 657, 942 |
| GluI | GCNGC | 6 cut(s) | 238, 264, 267, 428, 828, 944 |
| GsaI | CCCAGC | 1 cut(s) | 525 |
| GsuI | CTGGAG | 3 cut(s) | 239, 374, 547 |
| HaeII | RGCGCY | 4 cut(s) | 118, 144, 354, 659 |
| HaeIII | GGCC | 5 cut(s) | 51, 161, 296, 500, 974 |
| HapII | CCGG | 7 cut(s) | 44, 144, 348, 366, 446, 529, 689 |
| HhaI | GCGC | 6 cut(s) | 92, 117, 143, 353, 658, 943 |
| Hin1I | GRCGYC | 4 cut(s) | 141, 189, 216, 351 |
| Hin1II | CATG | 4 cut(s) | 13, 160, 295, 810 |
| Hin6I | GCGC | 6 cut(s) | 90, 115, 141, 351, 656, 941 |
| HinP1I | GCGC | 6 cut(s) | 90, 115, 141, 351, 656, 941 |
| HincII | GTYRAC | 5 cut(s) | 6, 214, 220, 304, 601 |
| HindII | GTYRAC | 5 cut(s) | 6, 214, 220, 304, 601 |
| HinfI | GANTC | 3 cut(s) | 371, 557, 1016 |
| HpaI | GTTAAC | 1 cut(s) | 601 |
| HpaII | CCGG | 7 cut(s) | 44, 144, 348, 366, 446, 529, 689 |
| HphI | GGTGA | 3 cut(s) | 334, 435, 653 |
| Hpy166II | GTNNAC | 6 cut(s) | 6, 214, 220, 304, 601, 801 |
| Hpy188I | TCNGA | 3 cut(s) | 328, 792, 843 |
| Hpy188III | TCNNGA | 5 cut(s) | 27, 391, 487, 593, 928 |
| Hpy8I | GTNNAC | 6 cut(s) | 6, 214, 220, 304, 601, 801 |
| Hpy99I | CGWCG | 6 cut(s) | 137, 140, 155, 194, 218, 323 |
| HpyAV | CCTTC | 5 cut(s) | 79, 111, 280, 284, 905 |
| HpyCH4III | ACNGT | 2 cut(s) | 319, 641 |
| HpyCH4IV | ACGT | 7 cut(s) | 150, 189, 216, 399, 495, 597, 921 |
| HpyCH4V | TGCA | 2 cut(s) | 13, 616 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 153, 514, 836, 943 |
| HpyF3I | CTNAG | 3 cut(s) | 851, 1010, 1047 |
| HpySE526I | ACGT | 7 cut(s) | 150, 189, 216, 399, 495, 597, 921 |
| Hsp92I | GRCGYC | 4 cut(s) | 141, 189, 216, 351 |
| Hsp92II | CATG | 4 cut(s) | 13, 160, 295, 810 |
| HspAI | GCGC | 6 cut(s) | 90, 115, 141, 351, 656, 941 |
| KasI | GGCGCC | 2 cut(s) | 140, 350 |
| KroI | GCCGGC | 2 cut(s) | 143, 347 |
| KroNI | GCCGGC | 2 cut(s) | 145, 349 |
| KspAI | GTTAAC | 1 cut(s) | 601 |
| KspI | CCGCGG | 1 cut(s) | 238 |
| Kzo9I | GATC | 5 cut(s) | 29, 250, 462, 586, 867 |
| LmnI | GCTCC | 5 cut(s) | 237, 329, 634, 653, 843 |
| Lsp1109I | GCAGC | 1 cut(s) | 955 |
| LweI | GCATC | 1 cut(s) | 234 |
| MaeI | CTAG | 2 cut(s) | 704, 740 |
| MaeII | ACGT | 7 cut(s) | 150, 189, 216, 399, 495, 597, 921 |
| MaeIII | GTNAC | 3 cut(s) | 313, 340, 641 |
| MalI | GATC | 5 cut(s) | 31, 252, 464, 588, 869 |
| MboI | GATC | 5 cut(s) | 29, 250, 462, 586, 867 |
| MboII | GAAGA | 2 cut(s) | 64, 877 |
| MfeI | CAATTG | 1 cut(s) | 813 |
| MflI | RGATCY | 1 cut(s) | 867 |
| MhlI | GDGCHC | 3 cut(s) | 204, 548, 639 |
| MlsI | TGGCCA | 2 cut(s) | 161, 974 |
| MluCI | AATT | 1 cut(s) | 813 |
| MluNI | TGGCCA | 2 cut(s) | 161, 974 |
| Mly113I | GGCGCC | 2 cut(s) | 141, 351 |
| MlyI | GAGTC | 2 cut(s) | 380, 1010 |
| MmeI | TCCRAC | 2 cut(s) | 351, 495 |
| Mox20I | TGGCCA | 2 cut(s) | 161, 974 |
| MreI | CGCCGGCG | 1 cut(s) | 347 |
| MroNI | GCCGGC | 2 cut(s) | 143, 347 |
| MroXI | GAANNNNTTC | 1 cut(s) | 747 |
| MscI | TGGCCA | 2 cut(s) | 161, 974 |
| MseI | TTAA | 3 cut(s) | 59, 179, 600 |
| Msp20I | TGGCCA | 2 cut(s) | 161, 974 |
| MspA1I | CMGCKG | 1 cut(s) | 237 |
| MspI | CCGG | 7 cut(s) | 44, 144, 348, 366, 446, 529, 689 |
| MspR9I | CCNGG | 8 cut(s) | 45, 53, 366, 376, 502, 530, 565, 836 |
| MunI | CAATTG | 1 cut(s) | 813 |
| MvaI | CCWGG | 5 cut(s) | 53, 376, 502, 565, 836 |
| MvnI | CGCG | 2 cut(s) | 90, 237 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 153, 514, 836, 943 |
| NaeI | GCCGGC | 2 cut(s) | 145, 349 |
| NarI | GGCGCC | 2 cut(s) | 141, 351 |
| NciI | CCSGG | 3 cut(s) | 45, 366, 530 |
| NdeII | GATC | 5 cut(s) | 29, 250, 462, 586, 867 |
| NgoMIV | GCCGGC | 2 cut(s) | 143, 347 |
| NlaIII | CATG | 4 cut(s) | 13, 160, 295, 810 |
| NlaIV | GGNNCC | 7 cut(s) | 42, 142, 325, 352, 547, 569, 857 |
| NmuCI | GTSAC | 2 cut(s) | 340, 641 |
| NsbI | TGCGCA | 1 cut(s) | 942 |
| NspV | TTCGAA | 1 cut(s) | 412 |
| PceI | AGGCCT | 1 cut(s) | 51 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 210, 315 |
| PdiI | GCCGGC | 2 cut(s) | 145, 349 |
| PdmI | GAANNNNTTC | 1 cut(s) | 747 |
| PfeI | GAWTC | 1 cut(s) | 557 |
| PfoI | TCCNGGA | 1 cut(s) | 43 |
| PkrI | GCNGC | 6 cut(s) | 239, 265, 268, 429, 829, 945 |
| PleI | GAGTC | 2 cut(s) | 379, 1010 |
| PluTI | GGCGCC | 2 cut(s) | 144, 354 |
| PpsI | GAGTC | 2 cut(s) | 379, 1010 |
| Ppu21I | YACGTR | 1 cut(s) | 496 |
| Psp124BI | GAGCTC | 1 cut(s) | 204 |
| Psp6I | CCWGG | 5 cut(s) | 51, 374, 500, 563, 834 |
| PspFI | CCCAGC | 1 cut(s) | 521 |
| PspGI | CCWGG | 5 cut(s) | 51, 374, 500, 563, 834 |
| PspN4I | GGNNCC | 7 cut(s) | 42, 142, 325, 352, 547, 569, 857 |
| PspPI | GGNCC | 3 cut(s) | 41, 856, 1039 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1009 |
| PsuI | RGATCY | 1 cut(s) | 867 |
| RsaI | GTAC | 2 cut(s) | 440, 885 |
| RsaNI | GTAC | 2 cut(s) | 439, 884 |
| SacI | GAGCTC | 1 cut(s) | 204 |
| SacII | CCGCGG | 1 cut(s) | 238 |
| SalI | GTCGAC | 1 cut(s) | 212 |
| SaqAI | TTAA | 3 cut(s) | 59, 179, 600 |
| SatI | GCNGC | 6 cut(s) | 238, 264, 267, 428, 828, 944 |
| Sau3AI | GATC | 5 cut(s) | 29, 250, 462, 586, 867 |
| Sau96I | GGNCC | 3 cut(s) | 41, 856, 1039 |
| ScaI | AGTACT | 1 cut(s) | 440 |
| SchI | GAGTC | 2 cut(s) | 380, 1010 |
| ScrFI | CCNGG | 8 cut(s) | 45, 53, 366, 376, 502, 530, 565, 836 |
| SduI | GDGCHC | 3 cut(s) | 204, 548, 639 |
| SfaNI | GCATC | 1 cut(s) | 234 |
| SfoI | GGCGCC | 2 cut(s) | 142, 352 |
| Sfr303I | CCGCGG | 1 cut(s) | 238 |
| SfuI | TTCGAA | 1 cut(s) | 412 |
| SgrAI | CRCCGGYG | 1 cut(s) | 347 |
| SgrBI | CCGCGG | 1 cut(s) | 238 |
| SinI | GGWCC | 3 cut(s) | 41, 856, 1039 |
| SmlI | CTYRAG | 1 cut(s) | 928 |
| SmoI | CTYRAG | 1 cut(s) | 928 |
| Sse9I | AATT | 1 cut(s) | 813 |
| SseBI | AGGCCT | 1 cut(s) | 51 |
| SspDI | GGCGCC | 2 cut(s) | 140, 350 |
| SspMI | CTAG | 2 cut(s) | 704, 740 |
| SstI | GAGCTC | 1 cut(s) | 204 |
| StuI | AGGCCT | 1 cut(s) | 51 |
| StyD4I | CCNGG | 8 cut(s) | 43, 51, 364, 374, 500, 528, 563, 834 |
| StyI | CCWWGG | 1 cut(s) | 891 |
| TaaI | ACNGT | 2 cut(s) | 319, 641 |
| TaiI | ACGT | 7 cut(s) | 153, 192, 219, 402, 498, 600, 924 |
| TaqI | TCGA | 5 cut(s) | 213, 249, 412, 555, 665 |
| TasI | AATT | 1 cut(s) | 813 |
| TatI | WGTACW | 1 cut(s) | 438 |
| TauI | GCSGC | 5 cut(s) | 240, 266, 269, 430, 830 |
| TfiI | GAWTC | 1 cut(s) | 557 |
| Tru1I | TTAA | 3 cut(s) | 59, 179, 600 |
| Tru9I | TTAA | 3 cut(s) | 59, 179, 600 |
| TscAI | CASTG | 2 cut(s) | 42, 994 |
| TseFI | GTSAC | 2 cut(s) | 340, 641 |
| TseI | GCWGC | 1 cut(s) | 943 |
| Tsp45I | GTSAC | 2 cut(s) | 340, 641 |
| TspDTI | ATGAA | 1 cut(s) | 795 |
| TspGWI | ACGGA | 4 cut(s) | 121, 289, 640, 918 |
| TspRI | CASTG | 2 cut(s) | 42, 994 |
| VpaK11BI | GGWCC | 3 cut(s) | 41, 856, 1039 |
| XmiI | GTMKAC | 2 cut(s) | 213, 800 |
| XmnI | GAANNNNTTC | 1 cut(s) | 747 |
| XspI | CTAG | 2 cut(s) | 704, 740 |
| ZraI | GACGTC | 2 cut(s) | 190, 217 |
| ZrmI | AGTACT | 1 cut(s) | 440 |