Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005141

Physical Location & Seq

Genomic Coordinates Forward (+)

48348279 .. 48349983

Gene Structure 1705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00254220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 987 bp

ATGCACAAAAGCACTTCAGCTTCTTCCCTCGGCCCCGGAGGCCTCGACCTAACCCAGGCCTTCTTCAAGCCCATCCACGGCGCCGCCCCTCCCTCCTCCTCCAACGGCCAGACCAAGATCTCCGTCATCGGCGCCGGTAACGTCGGCATGGCCATCGCCCAGACCATCCTCACCCAGGACCTGGCCGACGAGCTCGTCCTCGTCGACGCCATCCCCGATAAGCTCCGCGGCGAGATGCTTGACCTCCAGCACGCCGCCGCCTTCCTCCCCCGCACCAAGATCAACGCCTCCGTTGACTACGCCGTCACCGCCGGCTCCGACCTCTGCATTGTCACCGCCGGTGCCCGCCAGATCCACGGCGAGTCCAGGCTGAACCTGCTGCAGAGGAACGTCGCTCTCTTCCGCAAGATCATCCCCCCGCTCGCAAAGTACTCGCCGGAGACCATTTTGCTGATCGTTTCGAACCCGGTCGATGTGTTGACGTATGTGGCCTGGAAGCTGTCCGGGTTCCCCAGCAACCGGGTTGTCGGGTCGGGTACCAATCTGGACTCCTCCCGCTTTCGGTTCCTCATTGCCGATCATCTTGACGTTAACGCTCAGGATGTGCAGGCGTACATTGTGGGGGAGCATGGTGATAGCTCAGTGGCACTATGGTCGAGCATTAGCGTTGGGGGAGTTCCGGTGTTGAGTTTCTTAGAGAAGCAGCAGATAGCGTACGAGAAAGAAACGCTTGAGAGCATTCACAAAGCAGTAGTGGACAGTGCTTATGAGGTGATAAGTCTCAAAGGTTATACTTCTTGGGCAATAGGGTACTCAGCGGCCGGGTTAGCTCGGAGCATATTGAGAGACCAGAGGAGTATCCACCCGGTCTCGGTGCTTGCAAAGGGGTTCTATGGTGTTGATGGTGGGGATGTGTTCTTGAGCTTGCCGGCTCAGCTCGGAAGGAGTGGAGTTTTTGGGGGTGACCAATGTGCATTTGACAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00010 ko00270 ko00620 ko00640 ko01100 ko01110 ko01120 ko01130 ko04922 map00010 map00270 map00620 map00640 map01100 map01110 map01120 map01130 map04922

Pfam Domains

Protein Families

Ldh_1_C Ldh_1_N

Protein Analysis

328

Amino Acids

34.86

Weight (kDa)

6.23

Isoelectric Point (pI)

32.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ldh_1_N	PF00056	38 - 177	5.8e-43	lactate/malate dehydrogenase, NAD binding domain
Ldh_1_C	PF02866	180 - 318	2.4e-27	lactate/malate dehydrogenase, alpha/beta C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17260
fragaria_vesca	FvH4_5g00090
malus_domestica	MD16G1010900.v1.1
prunus_persica	Prupe.1G339800_v2.0.a1 Prupe.5G072700_v2.0.a1 Prupe.6G054700_v2.0.a1
pyrus_communis	pycom06g05170 pycom16g01070
rosa_chinensis	RchiOBHm_Chr4g0406091 RchiOBHm_Chr4g0445541 RchiOBHm_Chr7g0202841
rosa_laevigata	RLG00000003568 RLG00000005731
rosa_multiflora	Rmu_co8326923.1_g000001 Rmu_ssc0000253.1_g000006
rosa_roxburghii	Rroxscaffold_3G00254220 Rroxscaffold_5G00379710 Rroxscaffold_5G00386020
rosa_rugosa	Rorug04G0362400 Rorug07G0073400.1
rosa_samantha	Rh4AG423800 Rh4BG435800 Rh4CG450500 Rh4DG432100 Rh7AG201200 Rh7BG201500 Rh7CG212600 Rh7DG208200
rosa_wichuraiana	Rw4G036320 Rw7G017600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	194, 302
Acc36I	ACCTGC	1 cut(s)	384
Acc65I	GGTACC	1 cut(s)	536
AccB1I	GGYRCC	4 cut(s)	80, 131, 341, 536
AccB7I	CCANNNNNTGG	1 cut(s)	181
AccBSI	CCGCTC	1 cut(s)	421
AccI	GTMKAC	1 cut(s)	204
AccII	CGCG	1 cut(s)	228
AclWI	GGATC	1 cut(s)	346
AcoI	YGGCCR	4 cut(s)	106, 150, 183, 819
AcyI	GRCGYC	3 cut(s)	81, 132, 207
AfaI	GTAC	5 cut(s)	431, 538, 614, 716, 812
AfiI	CCNNNNNNNGG	7 cut(s)	55, 77, 175, 181, 519, 561, 871
AgsI	TTSAA	1 cut(s)	67
AjnI	CCWGG	5 cut(s)	54, 174, 180, 365, 491
AluBI	AGCT	8 cut(s)	20, 193, 223, 499, 639, 830, 924, 937
AluI	AGCT	8 cut(s)	20, 193, 223, 499, 639, 830, 924, 937
Alw21I	GWGCWC	1 cut(s)	195
Alw26I	GTCTC	4 cut(s)	434, 785, 840, 874
AlwI	GGATC	1 cut(s)	346
AlwNI	CAGNNNCTG	1 cut(s)	181
AoxI	GGCC	8 cut(s)	31, 40, 57, 106, 150, 183, 489, 819
ApeKI	GCWGC	2 cut(s)	379, 703
Asp718I	GGTACC	1 cut(s)	536
AspLEI	GCGC	2 cut(s)	83, 134
AspS9I	GGNCC	2 cut(s)	32, 178
AsuC2I	CCSGG	6 cut(s)	36, 467, 505, 521, 823, 866
AsuHPI	GGTGA	6 cut(s)	163, 298, 325, 644, 784, 974
AsuII	TTCGAA	1 cut(s)	461
AvaII	GGWCC	1 cut(s)	178
BaeGI	GKGCMC	1 cut(s)	346
BalI	TGGCCA	1 cut(s)	152
BanI	GGYRCC	4 cut(s)	80, 131, 341, 536
BanII	GRGCYC	1 cut(s)	195
Bbv12I	GWGCWC	1 cut(s)	195
BbvI	GCAGC	2 cut(s)	366, 715
BccI	CCATC	5 cut(s)	80, 161, 173, 218, 896
BceAI	ACGGC	4 cut(s)	94, 121, 287, 373
BcgI	CGANNNNNNTGC	6 cut(s)	136, 170, 414, 448, 636, 670
BciT130I	CCWGG	5 cut(s)	56, 176, 182, 367, 493
BciVI	GTATCC	1 cut(s)	869
BcnI	CCSGG	6 cut(s)	36, 467, 505, 521, 823, 866
BcoDI	GTCTC	4 cut(s)	434, 785, 840, 874
BfmI	CTRYAG	1 cut(s)	380
BfoI	RGCGCY	2 cut(s)	84, 135
BfuAI	ACCTGC	1 cut(s)	384
BfuI	GTATCC	1 cut(s)	869
BglI	GCCNNNNNGGC	1 cut(s)	39
BglII	AGATCT	1 cut(s)	117
BisI	GCNGC	7 cut(s)	84, 229, 255, 258, 380, 704, 819
BlpI	GCTNAGC	1 cut(s)	933
BlsI	GCNGC	7 cut(s)	85, 230, 256, 259, 381, 705, 820
BmcAI	AGTACT	1 cut(s)	431
Bme18I	GGWCC	1 cut(s)	178
BmgT120I	GGNCC	2 cut(s)	32, 178
BmiI	GGNNCC	8 cut(s)	34, 82, 133, 316, 343, 509, 538, 566
BmsI	GCATC	1 cut(s)	225
BpmI	CTGGAG	1 cut(s)	230
Bpu10I	CCTNAGC	1 cut(s)	597
Bpu1102I	GCTNAGC	1 cut(s)	933
Bpu14I	TTCGAA	1 cut(s)	461
BpuEI	CTTGAG	2 cut(s)	752, 940
BpuMI	CCSGG	6 cut(s)	36, 467, 505, 521, 823, 866
BsaHI	GRCGYC	3 cut(s)	81, 132, 207
BsaI	GGTCTC	3 cut(s)	434, 840, 874
BsaJI	CCNNGG	7 cut(s)	28, 34, 54, 76, 174, 226, 355
BsaWI	WCCGGW	1 cut(s)	679
BsaXI	ACNNNNNCTCC	2 cut(s)	666, 696
Bsc4I	CCNNNNNNNGG	7 cut(s)	55, 77, 175, 181, 519, 561, 871
Bse118I	RCCGGY	4 cut(s)	134, 311, 338, 928
Bse3DI	GCAATG	1 cut(s)	570
BseBI	CCWGG	5 cut(s)	56, 176, 182, 367, 493
BseDI	CCNNGG	7 cut(s)	28, 34, 54, 76, 174, 226, 355
BseGI	GGATG	6 cut(s)	72, 165, 210, 411, 607, 916
BseLI	CCNNNNNNNGG	7 cut(s)	55, 77, 175, 181, 519, 561, 871
BseMI	GCAATG	1 cut(s)	570
BseMII	CTCAG	4 cut(s)	611, 654, 828, 947
BseRI	GAGGAG	4 cut(s)	85, 88, 541, 868
BseSI	GKGCMC	1 cut(s)	346
BseX3I	CGGCCG	1 cut(s)	819
BseXI	GCAGC	2 cut(s)	366, 715
BseYI	CCCAGC	1 cut(s)	512
BsgI	GTGCAG	1 cut(s)	626
Bsh1236I	CGCG	1 cut(s)	228
Bsh1285I	CGRYCG	2 cut(s)	471, 822
BshFI	GGCC	8 cut(s)	33, 42, 59, 108, 152, 185, 491, 821
BshNI	GGYRCC	4 cut(s)	80, 131, 341, 536
BsiEI	CGRYCG	2 cut(s)	471, 822
BsiHKAI	GWGCWC	1 cut(s)	195
BsiWI	CGTACG	1 cut(s)	714
BslI	CCNNNNNNNGG	7 cut(s)	55, 77, 175, 181, 519, 561, 871
BsmAI	GTCTC	4 cut(s)	434, 785, 840, 874
BsmI	GAATGC	1 cut(s)	738
BsnI	GGCC	8 cut(s)	33, 42, 59, 108, 152, 185, 491, 821
Bso31I	GGTCTC	3 cut(s)	434, 840, 874
Bsp119I	TTCGAA	1 cut(s)	461
Bsp1286I	GDGCHC	2 cut(s)	195, 346
Bsp143I	GATC	6 cut(s)	117, 279, 351, 408, 453, 577
Bsp1720I	GCTNAGC	1 cut(s)	933
BspANI	GGCC	8 cut(s)	33, 42, 59, 108, 152, 185, 491, 821
BspCNI	CTCAG	4 cut(s)	610, 653, 827, 946
BspFNI	CGCG	1 cut(s)	228
BspLI	GGNNCC	8 cut(s)	34, 82, 133, 316, 343, 509, 538, 566
BspMAI	CTGCAG	1 cut(s)	384
BspMI	ACCTGC	1 cut(s)	384
BspPI	GGATC	1 cut(s)	346
BspT104I	TTCGAA	1 cut(s)	461
BspT107I	GGYRCC	4 cut(s)	80, 131, 341, 536
BspTNI	GGTCTC	3 cut(s)	434, 840, 874
BsrBI	CCGCTC	1 cut(s)	421
BsrDI	GCAATG	1 cut(s)	570
BsrFI	RCCGGY	4 cut(s)	134, 311, 338, 928
BssAI	RCCGGY	4 cut(s)	134, 311, 338, 928
BssECI	CCNNGG	7 cut(s)	28, 34, 54, 76, 174, 226, 355
BssMI	GATC	6 cut(s)	117, 279, 351, 408, 453, 577
BssNI	GRCGYC	3 cut(s)	81, 132, 207
Bst2UI	CCWGG	5 cut(s)	56, 176, 182, 367, 493
Bst4CI	ACNGT	1 cut(s)	761
Bst6I	CTCTTC	1 cut(s)	404
BstACI	GRCGYC	3 cut(s)	81, 132, 207
BstBI	TTCGAA	1 cut(s)	461
BstC8I	GCNNGC	8 cut(s)	252, 313, 346, 423, 609, 879, 926, 930
BstDEI	CTNAG	5 cut(s)	597, 640, 694, 814, 933
BstDSI	CCRYGG	3 cut(s)	76, 226, 355
BstEII	GGTNACC	1 cut(s)	962
BstENI	CCTNNNNNAGG	2 cut(s)	53, 173
BstF5I	GGATG	6 cut(s)	72, 165, 210, 411, 607, 916
BstFNI	CGCG	1 cut(s)	228
BstH2I	RGCGCY	2 cut(s)	84, 135
BstHHI	GCGC	2 cut(s)	83, 134
BstKTI	GATC	6 cut(s)	120, 282, 354, 411, 456, 580
BstMAI	GTCTC	4 cut(s)	434, 785, 840, 874
BstMBI	GATC	6 cut(s)	117, 279, 351, 408, 453, 577
BstMCI	CGRYCG	2 cut(s)	471, 822
BstMWI	GCNNNNNNNGC	5 cut(s)	39, 308, 376, 827, 934
BstNI	CCWGG	5 cut(s)	56, 176, 182, 367, 493
BstPI	GGTNACC	1 cut(s)	962
BstSFI	CTRYAG	1 cut(s)	380
BstSLI	GKGCMC	1 cut(s)	346
BstUI	CGCG	1 cut(s)	228
BstV1I	GCAGC	2 cut(s)	366, 715
BstX2I	RGATCY	2 cut(s)	117, 351
BstYI	RGATCY	2 cut(s)	117, 351
BstZI	CGGCCG	1 cut(s)	819
BsuI	GTATCC	1 cut(s)	869
BsuRI	GGCC	8 cut(s)	33, 42, 59, 108, 152, 185, 491, 821
BtgI	CCRYGG	3 cut(s)	76, 226, 355
BtgZI	GCGATG	1 cut(s)	139
BtsCI	GGATG	6 cut(s)	72, 165, 210, 411, 607, 916
BtsIMutI	CAGTG	2 cut(s)	648, 766
BveI	ACCTGC	1 cut(s)	384
Cac8I	GCNNGC	8 cut(s)	252, 313, 346, 423, 609, 879, 926, 930
CaiI	CAGNNNCTG	1 cut(s)	181
CfoI	GCGC	2 cut(s)	83, 134
Cfr10I	RCCGGY	4 cut(s)	134, 311, 338, 928
Cfr13I	GGNCC	2 cut(s)	32, 178
Cfr42I	CCGCGG	1 cut(s)	229
CseI	GACGC	1 cut(s)	215
Csp6I	GTAC	5 cut(s)	430, 537, 613, 715, 811
CviAII	CATG	2 cut(s)	148, 629
CviQI	GTAC	5 cut(s)	430, 537, 613, 715, 811
DdeI	CTNAG	5 cut(s)	597, 640, 694, 814, 933
DinI	GGCGCC	2 cut(s)	82, 133
DpnI	GATC	6 cut(s)	119, 281, 353, 410, 455, 579
DpnII	GATC	6 cut(s)	117, 279, 351, 408, 453, 577
DrdI	GACNNNNNNGTC	2 cut(s)	194, 302
DseDI	GACNNNNNNGTC	2 cut(s)	194, 302
EaeI	YGGCCR	4 cut(s)	106, 150, 183, 819
EagI	CGGCCG	1 cut(s)	819
Eam1104I	CTCTTC	1 cut(s)	404
EarI	CTCTTC	1 cut(s)	404
Ecl136II	GAGCTC	1 cut(s)	193
EclXI	CGGCCG	1 cut(s)	819
Eco147I	AGGCCT	2 cut(s)	42, 59
Eco24I	GRGCYC	1 cut(s)	195
Eco31I	GGTCTC	3 cut(s)	434, 840, 874
Eco47I	GGWCC	1 cut(s)	178
Eco52I	CGGCCG	1 cut(s)	819
Eco53kI	GAGCTC	1 cut(s)	193
Eco91I	GGTNACC	1 cut(s)	962
EcoICRI	GAGCTC	1 cut(s)	193
EcoNI	CCTNNNNNAGG	2 cut(s)	53, 173
EcoO109I	RGGNCCY	1 cut(s)	178
EcoO65I	GGTNACC	1 cut(s)	962
EcoRII	CCWGG	5 cut(s)	54, 174, 180, 365, 491
EcoT38I	GRGCYC	1 cut(s)	195
EgeI	GGCGCC	2 cut(s)	82, 133
EheI	GGCGCC	2 cut(s)	82, 133
FaeI	CATG	2 cut(s)	151, 632
FaiI	YATR	8 cut(s)	149, 486, 630, 652, 768, 792, 839, 894
FalI	AAGNNNNNCTT	2 cut(s)	714, 746
FatI	CATG	2 cut(s)	147, 628
FauI	CCCGC	4 cut(s)	278, 353, 426, 563
FblI	GTMKAC	1 cut(s)	204
Fnu4HI	GCNGC	7 cut(s)	84, 229, 255, 258, 380, 704, 819
FokI	GGATG	6 cut(s)	59, 152, 197, 398, 614, 923
FriOI	GRGCYC	1 cut(s)	195
Fsp4HI	GCNGC	7 cut(s)	84, 229, 255, 258, 380, 704, 819
GlaI	GCGC	2 cut(s)	82, 133
GluI	GCNGC	7 cut(s)	84, 229, 255, 258, 380, 704, 819
GsaI	CCCAGC	1 cut(s)	516
GsuI	CTGGAG	1 cut(s)	230
HaeII	RGCGCY	2 cut(s)	84, 135
HaeIII	GGCC	8 cut(s)	33, 42, 59, 108, 152, 185, 491, 821
HgaI	GACGC	1 cut(s)	215
HhaI	GCGC	2 cut(s)	83, 134
Hin1I	GRCGYC	3 cut(s)	81, 132, 207
Hin1II	CATG	2 cut(s)	151, 632
Hin6I	GCGC	2 cut(s)	81, 132
HinP1I	GCGC	2 cut(s)	81, 132
HincII	GTYRAC	4 cut(s)	205, 295, 480, 592
HindII	GTYRAC	4 cut(s)	205, 295, 480, 592
HinfI	GANTC	2 cut(s)	362, 548
HpaI	GTTAAC	1 cut(s)	592
HphI	GGTGA	6 cut(s)	163, 298, 325, 644, 784, 974
Hpy166II	GTNNAC	5 cut(s)	205, 295, 480, 592, 757
Hpy188I	TCNGA	3 cut(s)	319, 834, 941
Hpy188III	TCNNGA	4 cut(s)	545, 584, 599, 919
Hpy8I	GTNNAC	5 cut(s)	205, 295, 480, 592, 757
Hpy99I	CGWCG	5 cut(s)	146, 191, 206, 209, 395
HpyAV	CCTTC	3 cut(s)	70, 271, 936
HpyCH4III	ACNGT	1 cut(s)	761
HpyCH4IV	ACGT	4 cut(s)	141, 390, 482, 588
HpyCH4V	TGCA	6 cut(s)	4, 327, 382, 607, 881, 974
HpyF10VI	GCNNNNNNNGC	5 cut(s)	39, 308, 376, 827, 934
HpyF3I	CTNAG	5 cut(s)	597, 640, 694, 814, 933
HpySE526I	ACGT	4 cut(s)	141, 390, 482, 588
Hsp92I	GRCGYC	3 cut(s)	81, 132, 207
Hsp92II	CATG	2 cut(s)	151, 632
HspAI	GCGC	2 cut(s)	81, 132
KasI	GGCGCC	2 cut(s)	80, 131
KpnI	GGTACC	1 cut(s)	540
KroI	GCCGGC	2 cut(s)	311, 928
KroNI	GCCGGC	2 cut(s)	313, 930
KspAI	GTTAAC	1 cut(s)	592
KspI	CCGCGG	1 cut(s)	229
Kzo9I	GATC	6 cut(s)	117, 279, 351, 408, 453, 577
LmnI	GCTCC	4 cut(s)	228, 320, 625, 834
Lsp1109I	GCAGC	2 cut(s)	366, 715
LweI	GCATC	1 cut(s)	225
MaeII	ACGT	4 cut(s)	141, 390, 482, 588
MaeIII	GTNAC	4 cut(s)	137, 304, 331, 962
MalI	GATC	6 cut(s)	119, 281, 353, 410, 455, 579
MbiI	CCGCTC	1 cut(s)	421
MboI	GATC	6 cut(s)	117, 279, 351, 408, 453, 577
MboII	GAAGA	3 cut(s)	15, 55, 391
MflI	RGATCY	2 cut(s)	117, 351
MhlI	GDGCHC	2 cut(s)	195, 346
MlsI	TGGCCA	1 cut(s)	152
MluNI	TGGCCA	1 cut(s)	152
Mly113I	GGCGCC	2 cut(s)	81, 132
MlyI	GAGTC	2 cut(s)	371, 542
MmeI	TCCRAC	2 cut(s)	126, 342
Mox20I	TGGCCA	1 cut(s)	152
MroNI	GCCGGC	2 cut(s)	311, 928
MscI	TGGCCA	1 cut(s)	152
MseI	TTAA	1 cut(s)	591
Msp20I	TGGCCA	1 cut(s)	152
MspA1I	CMGCKG	2 cut(s)	228, 818
Mva1269I	GAATGC	1 cut(s)	738
MvaI	CCWGG	5 cut(s)	56, 176, 182, 367, 493
MvnI	CGCG	1 cut(s)	228
MwoI	GCNNNNNNNGC	5 cut(s)	39, 308, 376, 827, 934
NaeI	GCCGGC	2 cut(s)	313, 930
NarI	GGCGCC	2 cut(s)	81, 132
NciI	CCSGG	6 cut(s)	36, 467, 505, 521, 823, 866
NdeII	GATC	6 cut(s)	117, 279, 351, 408, 453, 577
NgoMIV	GCCGGC	2 cut(s)	311, 928
NlaIII	CATG	2 cut(s)	151, 632
NlaIV	GGNNCC	8 cut(s)	34, 82, 133, 316, 343, 509, 538, 566
NmeAIII	GCCGAG	1 cut(s)	9
NmuCI	GTSAC	3 cut(s)	304, 331, 962
NspV	TTCGAA	1 cut(s)	461
PceI	AGGCCT	2 cut(s)	42, 59
PcsI	WCGNNNNNNNCGW	2 cut(s)	201, 213
PctI	GAATGC	1 cut(s)	738
PdiI	GCCGGC	2 cut(s)	313, 930
Pfl23II	CGTACG	1 cut(s)	714
PflMI	CCANNNNNTGG	1 cut(s)	181
PkrI	GCNGC	7 cut(s)	85, 230, 256, 259, 381, 705, 820
PleI	GAGTC	2 cut(s)	370, 542
PluTI	GGCGCC	2 cut(s)	84, 135
PpsI	GAGTC	2 cut(s)	370, 542
PpuMI	RGGWCCY	1 cut(s)	178
Psp124BI	GAGCTC	1 cut(s)	195
Psp5II	RGGWCCY	1 cut(s)	178
Psp6I	CCWGG	5 cut(s)	54, 174, 180, 365, 491
PspEI	GGTNACC	1 cut(s)	962
PspFI	CCCAGC	1 cut(s)	512
PspGI	CCWGG	5 cut(s)	54, 174, 180, 365, 491
PspLI	CGTACG	1 cut(s)	714
PspN4I	GGNNCC	8 cut(s)	34, 82, 133, 316, 343, 509, 538, 566
PspPI	GGNCC	2 cut(s)	32, 178
PspPPI	RGGWCCY	1 cut(s)	178
PstI	CTGCAG	1 cut(s)	384
PstNI	CAGNNNCTG	1 cut(s)	181
PsuI	RGATCY	2 cut(s)	117, 351
RsaI	GTAC	5 cut(s)	431, 538, 614, 716, 812
RsaNI	GTAC	5 cut(s)	430, 537, 613, 715, 811
SacI	GAGCTC	1 cut(s)	195
SacII	CCGCGG	1 cut(s)	229
SalI	GTCGAC	1 cut(s)	203
SaqAI	TTAA	1 cut(s)	591
SatI	GCNGC	7 cut(s)	84, 229, 255, 258, 380, 704, 819
Sau3AI	GATC	6 cut(s)	117, 279, 351, 408, 453, 577
Sau96I	GGNCC	2 cut(s)	32, 178
ScaI	AGTACT	1 cut(s)	431
SchI	GAGTC	2 cut(s)	371, 542
SduI	GDGCHC	2 cut(s)	195, 346
SfaNI	GCATC	1 cut(s)	225
SfcI	CTRYAG	1 cut(s)	380
SfiI	GGCCNNNNNGGCC	1 cut(s)	39
SfoI	GGCGCC	2 cut(s)	82, 133
Sfr303I	CCGCGG	1 cut(s)	229
SfuI	TTCGAA	1 cut(s)	461
SgrAI	CRCCGGYG	1 cut(s)	338
SgrBI	CCGCGG	1 cut(s)	229
SgrDI	CGTCGACG	1 cut(s)	203
SinI	GGWCC	1 cut(s)	178
SmlI	CTYRAG	2 cut(s)	731, 919
SmoI	CTYRAG	2 cut(s)	731, 919
SseBI	AGGCCT	2 cut(s)	42, 59
SspDI	GGCGCC	2 cut(s)	80, 131
SstI	GAGCTC	1 cut(s)	195
StuI	AGGCCT	2 cut(s)	42, 59
TaaI	ACNGT	1 cut(s)	761
TaiI	ACGT	4 cut(s)	144, 393, 485, 591
TaqI	TCGA	5 cut(s)	45, 204, 461, 471, 656
TatI	WGTACW	1 cut(s)	429
TauI	GCSGC	5 cut(s)	86, 231, 257, 260, 821
Tru1I	TTAA	1 cut(s)	591
Tru9I	TTAA	1 cut(s)	591
TscAI	CASTG	2 cut(s)	648, 766
TseFI	GTSAC	3 cut(s)	304, 331, 962
TseI	GCWGC	2 cut(s)	379, 703
Tsp45I	GTSAC	3 cut(s)	304, 331, 962
TspGWI	ACGGA	2 cut(s)	112, 280
TspRI	CASTG	2 cut(s)	648, 766
Van91I	CCANNNNNTGG	1 cut(s)	181
VpaK11BI	GGWCC	1 cut(s)	178
XagI	CCTNNNNNAGG	2 cut(s)	53, 173
XmiI	GTMKAC	1 cut(s)	204
ZrmI	AGTACT	1 cut(s)	431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.