MD16G1092400.v1.1

Plant protein of unknown function (DUF936)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0011337
Physical Location & Seq
Reverse (-)
6378643 .. 6381173
2531 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1092400.v1.1.491

Sequence Viewer

Length: 1824 bp
ATGGCAGCTTTGGCACCGGGAATTCTACTGAAGCTCATGGACGGAATGAACACAGGGGTCAAGCCCACCGGCGAGCACCGGAGCGCGCTTCTGCAGGTCACTGATATCGTGCCGGCGGACCTTGACGAGAAGAGTCTTTGGCCCACACAGGGCTTCTACATAAAAGTCTCCGATTCTTCCCACTCAATCTACGTCAGCCTCCCCGCCGAACACAACGACTATGTTCTCAGTAACAAAATGCAGCTGGGACAGTTTATATATGTCGACAGATTGGAGCCCGGGTCGCCAGTGCCGGTGGTGAAGGGAGCCAAACCGCTCCCTGGCCGGCATCCTCTGATGGGTACACCGGAACCTCTAATGGGGCTGAGGGAGAAGGGAGAGAGGATCGAGCAAATGTCGAATTCAAAGCCTACTAGAAGGGGGTCTTGGGGAACAGGGCTTAATGGAGCTGATGGGGTTTCGTCTCCCATGGTGTTAAAGCCGGTTCCTTTGGATTTCGACCAGTGCACTCCGGTTAAAGAGCGTGGTGGAAGAAACGGGTCGATGTCTCCGATGATTAGGGGGAGAGTGGGAAGAGATGGAGGGTTGAATTCAGGCGTTCGGTCTTCGTTTGGTGGTGGACTTTTGGCTAAGATGGCGGATTCGAAGGGAGGCGAAAGCCCTGCATTGCGAAAAAGCTGTGTCATGCCGTCTATGTCGAAATTTCCTAGGAGTAGAAGTGTGTCTGATCAAGAGCCAAGGATCCCAATTAGTCCCTTCAACTCAGCTGTAGACTGTTGGATTTTGTTTGTTCAAGAAAAAAAGAAGACCTCAACTCCACCACCGCGAAATGCAAGAGTGGGAACTTCGCTCAGTGTGGCTGGAGATGCTGCACAGAAATCCTCCAACTCGAAGGACATGAACACGAACTCTCAGCAGCAGCCTCAGCCTGGTAACTTGTGCAACGAAAACAGCACTAGCCTCTGCCTCCCCATGAATTTACCAGGAAGGCTCAGCTTGCTCGGCAAAGAAGCTGTGCAGCATAGAGAGACTGCTCAGAAGATTGCCCTTAATGCACTCAGAGAGGCTTCAGCAACCGATACCCTTGTTCGATCTCTCAAGATGTTCTCAAACTTAAGCAGAACAGCTAAAGCGGATGCCCCATCAGCCTGCTTTGATAAATTCCTCGAATTCCATCACCAAATCGTCCAATCAGTTAATGATATGGTATCGATTCAAGCAGCTACTTCAGCTTCTGAAATGACTCAGACTACTCCAAAAGTTAAGCAGCAGAAAGATAAAGATCAAGATGATGAAGACCATTCCGTCTTGCACGAAATTGTTCAAAACTCCGTGAACTCAAAATTGAACCTATCGAAAAGAAGGTGCGCTTTGTACAAATCGGTTGCAGCCGTTCCTGAAAGAAGCGAGCAGAAAACGACAACGTTTGAGAAGCTCCTGAGAAGCTCTACACATCAAAAGCCGAAAGCACCATCCACTCCGCTTGGAAAGCTGAGCCTTGAAACCATTGGTGAGAACGACGAAAACAAGAAACCGGCTTCTGCTAGTTTAAGCAGCTTAAGCAACACAATCAGGTTGAGTGAGCAGATAGAAACAGAAGCTGGGAACTGGTTTATGGAGTTCATAGAGAAGGCATTGGAGACGGGGATGAAGAAATCAAAAGGCACGACAACGGATAAAGATATCCGAAAAGTGCCTCAATCTCTCATTCTTAGATTGATCAATTGGGTGGAAGTAGAACAGTGTGACAGCAGCAAGCGGCCTGTGCATCCGAAAGCAGCGCAGTTGGCTCGAAAGTTGAGGATCAAAGTGAAGAATCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF936

Protein Analysis

608

Amino Acids

66.29

Weight (kDa)

9.52

Isoelectric Point (pI)

49.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF936 PF06075 4 - 120 4.4e-47 Plant protein of unknown function (DUF936)
DUF6857 PF21647 326 - 561 1e-29 Domain of unknown function (DUF6857)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G23790 AT1G70340
fragaria_vesca FvH4_4g34410 FvH4_4g34410
malus_domestica MD13G1091800.v1.1 MD16G1092400.v1.1
prunus_persica Prupe.1G254000_v2.0.a1
pyrus_communis pycom13g07970 pycom16g07880
rosa_chinensis RchiOBHm_Chr4g0443831
rosa_laevigata RLG00000005884
rosa_multiflora Rmu_sc0005632.1_g000006 Rmu_sc0026423.1_g000001
rosa_roxburghii Rroxscaffold_5G00384400
rosa_rugosa Rorug04G0347700
rosa_samantha Rh4AG407900 Rh4BG418900 Rh4CG433000 Rh4DG414100
rosa_wichuraiana Rw4G035030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1304
Acc36I ACCTGC 1 cut(s) 85
AccB1I GGYRCC 1 cut(s) 13
AccBSI CCGCTC 1 cut(s) 316
AccI GTMKAC 2 cut(s) 264, 771
AccII CGCG 2 cut(s) 86, 826
AciI CCGC 8 cut(s) 116, 204, 314, 638, 824, 1133, 1481, 1759
AclI AACGTT 1 cut(s) 1424
AclWI GGATC 4 cut(s) 392, 736, 749, 1811
AcoI YGGCCR 1 cut(s) 322
AcsI RAATTY 7 cut(s) 21, 400, 589, 701, 976, 1160, 1169
AcuI CTGAAG 3 cut(s) 50, 1053, 1212
AfaI GTAC 2 cut(s) 343, 1376
AfiI CCNNNNNNNGG 5 cut(s) 149, 320, 338, 359, 929
AflII CTTAAG 2 cut(s) 1114, 1558
AgsI TTSAA 8 cut(s) 405, 589, 760, 794, 1217, 1325, 1348, 1502
AjnI CCWGG 3 cut(s) 319, 928, 982
AjuI GAANNNNNNNTTGG 2 cut(s) 409, 441
Alw21I GWGCWC 2 cut(s) 78, 509
Alw26I GTCTC 5 cut(s) 172, 468, 552, 1022, 1634
Alw44I GTGCAC 1 cut(s) 505
AlwI GGATC 4 cut(s) 392, 736, 749, 1811
AlwNI CAGNNNCTG 2 cut(s) 1235, 1601
Ama87I CYCGRG 1 cut(s) 278
AoxI GGCC 3 cut(s) 140, 322, 1760
ApaLI GTGCAC 1 cut(s) 505
ApoI RAATTY 7 cut(s) 21, 400, 589, 701, 976, 1160, 1169
Asp700I GAANNNNTTC 1 cut(s) 1320
AspA2I CCTAGG 1 cut(s) 707
AspLEI GCGC 4 cut(s) 86, 88, 1370, 1783
AspS9I GGNCC 2 cut(s) 118, 141
AsuC2I CCSGG 3 cut(s) 18, 279, 280
AsuHPI GGTGA 3 cut(s) 310, 1169, 1523
AsuII TTCGAA 1 cut(s) 644
AvaI CYCGRG 1 cut(s) 278
AvaII GGWCC 1 cut(s) 118
AvrII CCTAGG 1 cut(s) 707
BaeGI GKGCMC 1 cut(s) 509
BaeI ACNNNNGTAYC 2 cut(s) 1071, 1104
BamHI GGATCC 1 cut(s) 741
BanI GGYRCC 1 cut(s) 13
BanII GRGCYC 1 cut(s) 279
BbsI GAAGAC 3 cut(s) 597, 812, 1302
Bbv12I GWGCWC 2 cut(s) 78, 509
BbvCI CCTCAGC 2 cut(s) 365, 924
BccI CCATC 7 cut(s) 331, 446, 572, 628, 1150, 1182, 1480
BceAI ACGGC 2 cut(s) 673, 1376
BcgI CGANNNNNNTGC 4 cut(s) 644, 678, 1772, 1806
BciT130I CCWGG 3 cut(s) 321, 930, 984
BclI TGATCA 2 cut(s) 727, 1719
BcnI CCSGG 3 cut(s) 18, 279, 280
BcoDI GTCTC 5 cut(s) 172, 468, 552, 1022, 1634
BfaI CTAG 4 cut(s) 414, 708, 957, 1545
BfmI CTRYAG 2 cut(s) 92, 768
BfrI CTTAAG 2 cut(s) 1114, 1558
BfuAI ACCTGC 1 cut(s) 85
BlnI CCTAGG 1 cut(s) 707
BlpI GCTNAGC 2 cut(s) 992, 1493
Bme1390I CCNGG 6 cut(s) 18, 279, 280, 321, 930, 984
Bme18I GGWCC 1 cut(s) 118
BmeT110I CYCGRG 1 cut(s) 278
BmgT120I GGNCC 2 cut(s) 118, 141
BmiI GGNNCC 6 cut(s) 15, 276, 307, 351, 486, 743
BmrFI CCNGG 6 cut(s) 18, 279, 280, 321, 930, 984
BmsI GCATC 4 cut(s) 337, 856, 1126, 1777
BpiI GAAGAC 3 cut(s) 597, 812, 1302
BpmI CTGGAG 1 cut(s) 882
Bpu10I CCTNAGC 2 cut(s) 365, 924
Bpu1102I GCTNAGC 2 cut(s) 992, 1493
Bpu14I TTCGAA 1 cut(s) 644
BpuEI CTTGAG 1 cut(s) 1082
BpuMI CCSGG 3 cut(s) 18, 279, 280
Bsa29I ATCGAT 1 cut(s) 1211
BsaBI GATNNNNATC 1 cut(s) 1281
BsaJI CCNNGG 5 cut(s) 278, 319, 468, 707, 737
BsaWI WCCGGW 3 cut(s) 78, 346, 511
BsaXI ACNNNNNCTCC 6 cut(s) 266, 296, 703, 733, 799, 829
Bsc4I CCNNNNNNNGG 5 cut(s) 149, 320, 338, 359, 929
Bse118I RCCGGY 6 cut(s) 68, 112, 292, 324, 481, 1534
Bse1I ACTGG 3 cut(s) 287, 502, 1613
Bse3DI GCAATG 1 cut(s) 665
Bse8I GATNNNNATC 1 cut(s) 1281
BseBI CCWGG 3 cut(s) 321, 930, 984
BseCI ATCGAT 1 cut(s) 1211
BseDI CCNNGG 5 cut(s) 278, 319, 468, 707, 737
BseGI GGATG 5 cut(s) 328, 1141, 1472, 1653, 1768
BseJI GATNNNNATC 1 cut(s) 1281
BseLI CCNNNNNNNGG 5 cut(s) 149, 320, 338, 359, 929
BseMI GCAATG 1 cut(s) 665
BseNI ACTGG 3 cut(s) 287, 502, 1613
BsePI GCGCGC 1 cut(s) 84
BseSI GKGCMC 1 cut(s) 509
BseYI CCCAGC 2 cut(s) 244, 1601
BsgI GTGCAG 2 cut(s) 855, 1037
Bsh1236I CGCG 2 cut(s) 86, 826
BshFI GGCC 3 cut(s) 142, 324, 1762
BshNI GGYRCC 1 cut(s) 13
BshVI ATCGAT 1 cut(s) 1211
BsiHKAI GWGCWC 2 cut(s) 78, 509
BsiHKCI CYCGRG 1 cut(s) 278
BslFI GGGAC 2 cut(s) 261, 738
BslI CCNNNNNNNGG 5 cut(s) 149, 320, 338, 359, 929
BsmAI GTCTC 5 cut(s) 172, 468, 552, 1022, 1634
BsmBI CGTCTC 2 cut(s) 468, 1634
BsmFI GGGAC 2 cut(s) 261, 738
BsnI GGCC 3 cut(s) 142, 324, 1762
BsoBI CYCGRG 1 cut(s) 278
Bsp119I TTCGAA 1 cut(s) 644
Bsp1286I GDGCHC 3 cut(s) 78, 279, 509
Bsp1407I TGTACA 1 cut(s) 1374
Bsp143I GATC 7 cut(s) 384, 727, 741, 1091, 1282, 1719, 1803
Bsp1720I GCTNAGC 2 cut(s) 992, 1493
Bsp19I CCATGG 1 cut(s) 468
BspACI CCGC 8 cut(s) 116, 204, 314, 638, 824, 1133, 1481, 1759
BspANI GGCC 3 cut(s) 142, 324, 1762
BspDI ATCGAT 1 cut(s) 1211
BspFNI CGCG 2 cut(s) 86, 826
BspLI GGNNCC 6 cut(s) 15, 276, 307, 351, 486, 743
BspMAI CTGCAG 1 cut(s) 96
BspMI ACCTGC 1 cut(s) 85
BspPI GGATC 4 cut(s) 392, 736, 749, 1811
BspT104I TTCGAA 1 cut(s) 644
BspT107I GGYRCC 1 cut(s) 13
BspTI CTTAAG 2 cut(s) 1114, 1558
BsrBI CCGCTC 1 cut(s) 316
BsrDI GCAATG 1 cut(s) 665
BsrFI RCCGGY 6 cut(s) 68, 112, 292, 324, 481, 1534
BsrGI TGTACA 1 cut(s) 1374
BsrI ACTGG 3 cut(s) 287, 502, 1613
BssAI RCCGGY 6 cut(s) 68, 112, 292, 324, 481, 1534
BssECI CCNNGG 5 cut(s) 278, 319, 468, 707, 737
BssHII GCGCGC 1 cut(s) 84
BssMI GATC 7 cut(s) 384, 727, 741, 1091, 1282, 1719, 1803
BssT1I CCWWGG 3 cut(s) 468, 707, 737
Bst2UI CCWGG 3 cut(s) 321, 930, 984
Bst4CI ACNGT 3 cut(s) 252, 776, 1743
Bst6I CTCTTC 2 cut(s) 125, 568
BstAFI CTTAAG 2 cut(s) 1114, 1558
BstAUI TGTACA 1 cut(s) 1374
BstBI TTCGAA 1 cut(s) 644
BstC8I GCNNGC 8 cut(s) 74, 86, 114, 326, 998, 1150, 1409, 1757
BstDSI CCRYGG 1 cut(s) 468
BstF5I GGATG 5 cut(s) 328, 1141, 1472, 1653, 1768
BstFNI CGCG 2 cut(s) 86, 826
BstHHI GCGC 4 cut(s) 86, 88, 1370, 1783
BstKTI GATC 7 cut(s) 387, 730, 744, 1094, 1285, 1722, 1806
BstMAI GTCTC 5 cut(s) 172, 468, 552, 1022, 1634
BstMBI GATC 7 cut(s) 384, 727, 741, 1091, 1282, 1719, 1803
BstNI CCWGG 3 cut(s) 321, 930, 984
BstSCI CCNGG 6 cut(s) 16, 277, 278, 319, 928, 982
BstSFI CTRYAG 2 cut(s) 92, 768
BstSLI GKGCMC 1 cut(s) 509
BstUI CGCG 2 cut(s) 86, 826
BstV2I GAAGAC 3 cut(s) 597, 812, 1302
BstX2I RGATCY 1 cut(s) 741
BstYI RGATCY 1 cut(s) 741
Bsu15I ATCGAT 1 cut(s) 1211
BsuRI GGCC 3 cut(s) 142, 324, 1762
BsuTUI ATCGAT 1 cut(s) 1211
BtgI CCRYGG 1 cut(s) 468
BtsCI GGATG 5 cut(s) 328, 1141, 1472, 1653, 1768
BtsIMutI CAGTG 5 cut(s) 99, 294, 509, 859, 1748
BveI ACCTGC 1 cut(s) 85
Cac8I GCNNGC 8 cut(s) 74, 86, 114, 326, 998, 1150, 1409, 1757
CaiI CAGNNNCTG 2 cut(s) 1235, 1601
CfoI GCGC 4 cut(s) 86, 88, 1370, 1783
Cfr10I RCCGGY 6 cut(s) 68, 112, 292, 324, 481, 1534
Cfr13I GGNCC 2 cut(s) 118, 141
Cfr9I CCCGGG 1 cut(s) 278
ClaI ATCGAT 1 cut(s) 1211
Csp6I GTAC 2 cut(s) 342, 1375
CspCI CAANNNNNGTGG 2 cut(s) 1465, 1500
CviAII CATG 5 cut(s) 37, 469, 685, 898, 973
CviQI GTAC 2 cut(s) 342, 1375
DpnI GATC 7 cut(s) 386, 729, 743, 1093, 1284, 1721, 1805
DpnII GATC 7 cut(s) 384, 727, 741, 1091, 1282, 1719, 1803
DrdI GACNNNNNNGTC 1 cut(s) 1304
DseDI GACNNNNNNGTC 1 cut(s) 1304
EaeI YGGCCR 1 cut(s) 322
Eam1104I CTCTTC 2 cut(s) 125, 568
EarI CTCTTC 2 cut(s) 125, 568
EciI GGCGGA 2 cut(s) 131, 653
Eco130I CCWWGG 3 cut(s) 468, 707, 737
Eco24I GRGCYC 1 cut(s) 279
Eco32I GATATC 2 cut(s) 106, 1684
Eco47I GGWCC 1 cut(s) 118
Eco57I CTGAAG 3 cut(s) 50, 1053, 1212
Eco88I CYCGRG 1 cut(s) 278
EcoRI GAATTC 4 cut(s) 21, 400, 589, 1169
EcoRII CCWGG 3 cut(s) 319, 928, 982
EcoRV GATATC 2 cut(s) 106, 1684
EcoT14I CCWWGG 3 cut(s) 468, 707, 737
EcoT38I GRGCYC 1 cut(s) 279
ErhI CCWWGG 3 cut(s) 468, 707, 737
Esp3I CGTCTC 2 cut(s) 468, 1634
FaeI CATG 5 cut(s) 40, 472, 688, 901, 976
FalI AAGNNNNNCTT 4 cut(s) 409, 441, 1354, 1386
FaqI GGGAC 2 cut(s) 261, 738
FatI CATG 5 cut(s) 36, 468, 684, 897, 972
FauI CCCGC 1 cut(s) 211
FbaI TGATCA 2 cut(s) 727, 1719
FblI GTMKAC 2 cut(s) 264, 771
FokI GGATG 5 cut(s) 315, 1148, 1459, 1660, 1755
FriOI GRGCYC 1 cut(s) 279
FspBI CTAG 4 cut(s) 414, 708, 957, 1545
GlaI GCGC 4 cut(s) 85, 87, 1369, 1782
GsaI CCCAGC 2 cut(s) 248, 1605
GsuI CTGGAG 1 cut(s) 882
HaeIII GGCC 3 cut(s) 142, 324, 1762
HhaI GCGC 4 cut(s) 86, 88, 1370, 1783
Hin1II CATG 5 cut(s) 40, 472, 688, 901, 976
Hin6I GCGC 4 cut(s) 84, 86, 1368, 1781
HinP1I GCGC 4 cut(s) 84, 86, 1368, 1781
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HinfI GANTC 6 cut(s) 133, 173, 641, 1213, 1243, 1816
HphI GGTGA 3 cut(s) 310, 1169, 1523
Hpy166II GTNNAC 6 cut(s) 265, 344, 507, 620, 772, 1336
Hpy188III TCNNGA 6 cut(s) 731, 794, 1099, 1286, 1397, 1438
Hpy8I GTNNAC 6 cut(s) 265, 344, 507, 620, 772, 1336
Hpy99I CGWCG 1 cut(s) 1523
HpyAV CCTTC 9 cut(s) 295, 367, 411, 640, 766, 886, 981, 1356, 1624
HpyCH4III ACNGT 3 cut(s) 252, 776, 1743
HpyCH4IV ACGT 2 cut(s) 192, 1424
HpySE526I ACGT 2 cut(s) 192, 1424
Hsp92II CATG 5 cut(s) 40, 472, 688, 901, 976
HspAI GCGC 4 cut(s) 84, 86, 1368, 1781
KroI GCCGGC 2 cut(s) 112, 324
KroNI GCCGGC 2 cut(s) 114, 326
Ksp22I TGATCA 2 cut(s) 727, 1719
Kzo9I GATC 7 cut(s) 384, 727, 741, 1091, 1282, 1719, 1803
LmnI GCTCC 6 cut(s) 81, 274, 305, 321, 446, 1440
LweI GCATC 4 cut(s) 337, 856, 1126, 1777
MaeI CTAG 4 cut(s) 414, 708, 957, 1545
MaeII ACGT 2 cut(s) 192, 1424
MaeIII GTNAC 4 cut(s) 97, 230, 932, 1745
MalI GATC 7 cut(s) 386, 729, 743, 1093, 1284, 1721, 1805
MbiI CCGCTC 1 cut(s) 316
MboI GATC 7 cut(s) 384, 727, 741, 1091, 1282, 1719, 1803
MboII GAAGA 9 cut(s) 142, 168, 543, 585, 597, 817, 1051, 1307, 1663
MfeI CAATTG 1 cut(s) 1723
MflI RGATCY 1 cut(s) 741
MhlI GDGCHC 3 cut(s) 78, 279, 509
MlyI GAGTC 2 cut(s) 142, 1237
MmeI TCCRAC 2 cut(s) 758, 909
MroNI GCCGGC 2 cut(s) 112, 324
MroXI GAANNNNTTC 1 cut(s) 1320
MseI TTAA 9 cut(s) 441, 476, 516, 1050, 1115, 1197, 1263, 1550, 1559
MspA1I CMGCKG 2 cut(s) 244, 767
MspCI CTTAAG 2 cut(s) 1114, 1558
MspR9I CCNGG 6 cut(s) 18, 279, 280, 321, 930, 984
MunI CAATTG 1 cut(s) 1723
MvaI CCWGG 3 cut(s) 321, 930, 984
MvnI CGCG 2 cut(s) 86, 826
NaeI GCCGGC 2 cut(s) 114, 326
NciI CCSGG 3 cut(s) 18, 279, 280
NcoI CCATGG 1 cut(s) 468
NdeII GATC 7 cut(s) 384, 727, 741, 1091, 1282, 1719, 1803
NgoMIV GCCGGC 2 cut(s) 112, 324
NlaIII CATG 5 cut(s) 40, 472, 688, 901, 976
NlaIV GGNNCC 6 cut(s) 15, 276, 307, 351, 486, 743
NmeAIII GCCGAG 1 cut(s) 981
NmuCI GTSAC 2 cut(s) 97, 1745
NspV TTCGAA 1 cut(s) 644
PauI GCGCGC 1 cut(s) 84
PcsI WCGNNNNNNNCGW 1 cut(s) 548
PdiI GCCGGC 2 cut(s) 114, 326
PdmI GAANNNNTTC 1 cut(s) 1320
PfeI GAWTC 4 cut(s) 173, 641, 1213, 1816
PleI GAGTC 2 cut(s) 141, 1237
PpsI GAGTC 2 cut(s) 141, 1237
Psp1406I AACGTT 1 cut(s) 1424
Psp6I CCWGG 3 cut(s) 319, 928, 982
PspFI CCCAGC 2 cut(s) 244, 1601
PspGI CCWGG 3 cut(s) 319, 928, 982
PspN4I GGNNCC 6 cut(s) 15, 276, 307, 351, 486, 743
PspPI GGNCC 2 cut(s) 118, 141
PstI CTGCAG 1 cut(s) 96
PstNI CAGNNNCTG 2 cut(s) 1235, 1601
PsuI RGATCY 1 cut(s) 741
PteI GCGCGC 1 cut(s) 84
PvuII CAGCTG 2 cut(s) 244, 767
RsaI GTAC 2 cut(s) 343, 1376
RsaNI GTAC 2 cut(s) 342, 1375
SalI GTCGAC 1 cut(s) 263
SaqAI TTAA 9 cut(s) 441, 476, 516, 1050, 1115, 1197, 1263, 1550, 1559
Sau3AI GATC 7 cut(s) 384, 727, 741, 1091, 1282, 1719, 1803
Sau96I GGNCC 2 cut(s) 118, 141
SchI GAGTC 2 cut(s) 142, 1237
ScrFI CCNGG 6 cut(s) 18, 279, 280, 321, 930, 984
SduI GDGCHC 3 cut(s) 78, 279, 509
SfaNI GCATC 4 cut(s) 337, 856, 1126, 1777
SfcI CTRYAG 2 cut(s) 92, 768
SfuI TTCGAA 1 cut(s) 644
SgrAI CRCCGGYG 1 cut(s) 68
SinI GGWCC 1 cut(s) 118
SmaI CCCGGG 1 cut(s) 280
SmlI CTYRAG 3 cut(s) 1097, 1114, 1558
SmoI CTYRAG 3 cut(s) 1097, 1114, 1558
SsiI CCGC 8 cut(s) 116, 204, 314, 638, 824, 1133, 1481, 1759
SspMI CTAG 4 cut(s) 414, 708, 957, 1545
StyD4I CCNGG 6 cut(s) 16, 277, 278, 319, 928, 982
StyI CCWWGG 3 cut(s) 468, 707, 737
TaaI ACNGT 3 cut(s) 252, 776, 1743
TaiI ACGT 2 cut(s) 195, 1427
TaqII GACCGA 1 cut(s) 591
TatI WGTACW 1 cut(s) 1374
TauI GCSGC 1 cut(s) 1762
TfiI GAWTC 4 cut(s) 173, 641, 1213, 1816
Tru1I TTAA 9 cut(s) 441, 476, 516, 1050, 1115, 1197, 1263, 1550, 1559
Tru9I TTAA 9 cut(s) 441, 476, 516, 1050, 1115, 1197, 1263, 1550, 1559
TscAI CASTG 5 cut(s) 106, 294, 509, 859, 1748
TseFI GTSAC 2 cut(s) 97, 1745
Tsp45I GTSAC 2 cut(s) 97, 1745
TspDTI ATGAA 6 cut(s) 62, 914, 989, 1308, 1612, 1664
TspGWI ACGGA 4 cut(s) 57, 1294, 1321, 1688
TspMI CCCGGG 1 cut(s) 278
TspRI CASTG 5 cut(s) 106, 294, 509, 859, 1748
Vha464I CTTAAG 2 cut(s) 1114, 1558
VneI GTGCAC 1 cut(s) 505
VpaK11BI GGWCC 1 cut(s) 118
XapI RAATTY 7 cut(s) 21, 400, 589, 701, 976, 1160, 1169
XmaI CCCGGG 1 cut(s) 278
XmaJI CCTAGG 1 cut(s) 707
XmiI GTMKAC 2 cut(s) 264, 771
XmnI GAANNNNTTC 1 cut(s) 1320
XspI CTAG 4 cut(s) 414, 708, 957, 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.