Rh4BG418900

Plant protein of unknown function (DUF936)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
56542513 .. 56545054
2542 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG418900.1

Sequence Viewer

Length: 1773 bp
ATGGCGGCTCTGGCACCTGGAATTCTGCTGAAGCTCGTCAACTCCATGAACACGGGCCTTAAGCCCACCGGCGAGCACCGGAGCTCGCTTCTTCAGGTCACCGACATAGTCCCGGCGGACCTGGACGAGAAGAGCCTCTGGCCCACACAAGGGTTCTACATCAAGGTCTCCGACTCTTCCCACTCCATCTACGTCAGCCTCCCGTCCGAACAAGACGACATCGTTTTGAGCAACAAGATGCAGCTGGGTCAGTTTATATATGTGGACAGACTGGAGCCCGGGTCGCCGGTTCCGGTGGTCAAAGGAGCCAAGCCGCTCCCGGGCCGGCACCCTCTGATGGGGACTCCGGAGCCGTTGATGGGTCTGAGACAGAAGGGAGGAGGAGACAAAACAGAGCAGATGTCGAATTCGAAGCCGACTAGAAGAGGGTCTTGGGATTTGAATGGGGGTGATGTGGTTTCGTCTCCAATGGTGTTGAAGAATTTGGATTTTGATCAGTGTTATAGTACTCCGGTGAAGGACCGGCCGGTGAGGAATGCTGCTGCCATGTCTCCGATGATCAGGGGAAGAGTTGCAAGTGGTGGAGTTCGGTGCTCGTTTGGTGGTGGAGTTTTGGGGAAGATGGGGGACGCAAAGGGAGAGAGTCCATTGCTGAGGAAGAGCTGTGTGACTCCTTCAATGTCGAAGTTTCCGAGGAGCAAAAGCGTGTCTGATAGAGAGCCGAGGATTCCGATTAGTCCCTTCAACCAAGCTGAGAAGAAAAGCTCAACTCCACCACCGCGGCTGCGAAATGCAAGAGTGACAACGTCTCTCAATGTGGCTGGAGATGCACAAACCCCACAAAAGACCTCCAATTCAAAGCCACAGCAACCGCAGTCTGCTAATGTGTCGAATGACAGCAACAGCAACAGCACTAGTAGTCTCTGTCTTTCTATGAACTTACCAGGAAAACTCAGCACGCTTGGAAAAGAAGCTGTGCAGCAGCGAGAGACAGCTCAGAAGATTGCCCTCAATGCACTGAGAGATGCTTCGGCTACTGAGGCCTTAGTCCGATCACTCAAGACGTTTTCAAACTTGTGCAAAGCAGCAAAAGCAGATGCCCCAGCAGCCTGCTTTGATCAATTTCTCGAATTCCATCAGCAAGTTGTCCAAGCAGTGGCGGAAATGGTCTCAGTTCAAGCAGCTACTTCAGCTGCTCAAACACCAAATGCTAAGCAGCAGAGAGACAAAGAAGAAGAAGAAGATGCAGTGTTAAACGAAATGGTTCACAACTCCATGAACTCGAAATTGAGCTTATCGAAAAGAAGGTGCGCTTTGTACAAGTCAGTTGCAACCATTCCCGAAAGAGGTGAGCAGAAGACAAGCTTTGAGAAACAGCTGAGAGCCTCTAGTAATCAGAAGGAAAGGAAGACACCATCCACTCCCCTTGGAAGGCTGAATCTTGAAACCATTGGCGAGAATGATGAGAACAAGAAACCACCAGCTGTTTCTTCGAACTCTTGCAGCTTAACCAATACAATCAAATTGGGGAAGCAGATTGAAACAGAAGCTGGGAACTGGTTTATGGAATTCTTAGAGAAGACTTTGGAGAAAGGCATGAAGAAAACAAAAGGCACAACAACAGATGGGGATGTGCGAAAAGTACCCCAGTCTTTGATACTTAGAGTGATTAATTGGGTGGAAATACAACAATGTGATAGCAGTAAGCGACCAGTACATCCCAAGGCAGCACAAGTAGCCAGAAAGTTGAGGATCAAGATGAAGAATCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

590

Amino Acids

64.23

Weight (kDa)

9.66

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF936 PF06075 4 - 120 1.1e-47 Plant protein of unknown function (DUF936)
DUF6857 PF21647 312 - 563 1.7e-31 Domain of unknown function (DUF6857)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011337)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 13, 327
AccB7I CCANNNNNTGG 1 cut(s) 1156
AccBSI CCGCTC 1 cut(s) 316
AccII CGCG 1 cut(s) 781
AccIII TCCGGA 1 cut(s) 346
AciI CCGC 7 cut(s) 5, 116, 314, 779, 781, 872, 1160
AclWI GGATC 1 cut(s) 1760
AcoI YGGCCR 1 cut(s) 524
AcsI RAATTY 5 cut(s) 21, 406, 481, 1130, 1568
AcuI CTGAAG 3 cut(s) 50, 77, 1173
AfaI GTAC 4 cut(s) 508, 1319, 1644, 1716
AfiI CCNNNNNNNGG 9 cut(s) 149, 150, 320, 337, 338, 359, 1156, 1346, 1431
AflII CTTAAG 1 cut(s) 59
AgsI TTSAA 9 cut(s) 442, 478, 678, 745, 858, 1071, 1178, 1445, 1541
AhlI ACTAGT 1 cut(s) 914
AjnI CCWGG 3 cut(s) 16, 120, 943
AjuI GAANNNNNNNTTGG 2 cut(s) 415, 447
Alw21I GWGCWC 3 cut(s) 78, 86, 596
AlwI GGATC 1 cut(s) 1760
AlwNI CAGNNNCTG 1 cut(s) 1550
Ama87I CYCGRG 2 cut(s) 278, 319
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 5 cut(s) 55, 140, 322, 524, 1041
ApoI RAATTY 5 cut(s) 21, 406, 481, 1130, 1568
AseI ATTAAT 1 cut(s) 1671
Asp700I GAANNNNTTC 1 cut(s) 1263
AspLEI GCGC 1 cut(s) 1313
AspS9I GGNCC 5 cut(s) 55, 118, 141, 322, 520
AsuC2I CCSGG 5 cut(s) 113, 279, 280, 320, 321
AsuHPI GGTGA 5 cut(s) 91, 461, 526, 541, 1361
AsuII TTCGAA 2 cut(s) 410, 1493
AvaI CYCGRG 2 cut(s) 278, 319
AvaII GGWCC 2 cut(s) 118, 520
BanI GGYRCC 2 cut(s) 13, 327
BanII GRGCYC 2 cut(s) 86, 279
BbsI GAAGAC 3 cut(s) 1364, 1415, 1586
Bbv12I GWGCWC 3 cut(s) 78, 86, 596
BbvCI CCTCAGC 1 cut(s) 653
BccI CCATC 7 cut(s) 194, 331, 352, 616, 1143, 1423, 1619
BceAI ACGGC 1 cut(s) 337
BciT130I CCWGG 3 cut(s) 18, 122, 945
BclI TGATCA 3 cut(s) 493, 558, 1117
BcnI CCSGG 5 cut(s) 113, 279, 280, 320, 321
BcuI ACTAGT 1 cut(s) 914
BfaI CTAG 3 cut(s) 420, 915, 1389
BfrI CTTAAG 1 cut(s) 59
BlpI GCTNAGC 1 cut(s) 1212
BmcAI AGTACT 1 cut(s) 508
Bme1390I CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 945
Bme18I GGWCC 2 cut(s) 118, 520
BmeT110I CYCGRG 2 cut(s) 278, 319
BmgT120I GGNCC 5 cut(s) 55, 118, 141, 322, 520
BmiI GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
BmrFI CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 945
BmrI ACTGGG 1 cut(s) 1642
BmsI GCATC 5 cut(s) 228, 817, 1015, 1087, 1234
BmuI ACTGGG 1 cut(s) 1642
BpiI GAAGAC 3 cut(s) 1364, 1415, 1586
BpmI CTGGAG 2 cut(s) 293, 843
Bpu10I CCTNAGC 1 cut(s) 653
Bpu1102I GCTNAGC 1 cut(s) 1212
Bpu14I TTCGAA 2 cut(s) 410, 1493
BpuEI CTTGAG 1 cut(s) 1043
BpuMI CCSGG 5 cut(s) 113, 279, 280, 320, 321
BsaBI GATNNNNATC 1 cut(s) 492
BsaI GGTCTC 2 cut(s) 172, 1174
BsaJI CCNNGG 7 cut(s) 278, 319, 692, 722, 779, 1426, 1722
BsaWI WCCGGW 4 cut(s) 78, 292, 346, 511
BsaXI ACNNNNNCTCC 2 cut(s) 266, 296
Bsc4I CCNNNNNNNGG 9 cut(s) 149, 150, 320, 337, 338, 359, 1156, 1346, 1431
Bse118I RCCGGY 5 cut(s) 68, 286, 324, 522, 526
Bse1I ACTGG 4 cut(s) 276, 1562, 1648, 1712
Bse3DI GCAATG 1 cut(s) 647
Bse8I GATNNNNATC 1 cut(s) 492
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 3 cut(s) 18, 122, 945
BseDI CCNNGG 7 cut(s) 278, 319, 692, 722, 779, 1426, 1722
BseGI GGATG 3 cut(s) 1415, 1636, 1717
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 9 cut(s) 149, 150, 320, 337, 338, 359, 1156, 1346, 1431
BseMI GCAATG 1 cut(s) 647
BseMII CTCAG 9 cut(s) 356, 644, 744, 967, 1010, 1010, 1029, 1185, 1370
BseNI ACTGG 4 cut(s) 276, 1562, 1648, 1712
BseRI GAGGAG 3 cut(s) 393, 396, 709
BseX3I CGGCCG 1 cut(s) 524
BseYI CCCAGC 3 cut(s) 244, 1102, 1550
BsgI GTGCAG 1 cut(s) 998
Bsh1236I CGCG 1 cut(s) 781
Bsh1285I CGRYCG 1 cut(s) 527
BshFI GGCC 5 cut(s) 57, 142, 324, 526, 1043
BshNI GGYRCC 2 cut(s) 13, 327
BsiEI CGRYCG 1 cut(s) 527
BsiHKAI GWGCWC 3 cut(s) 78, 86, 596
BsiHKCI CYCGRG 2 cut(s) 278, 319
BslFI GGGAC 4 cut(s) 95, 355, 641, 723
BslI CCNNNNNNNGG 9 cut(s) 149, 150, 320, 337, 338, 359, 1156, 1346, 1431
BsmBI CGTCTC 2 cut(s) 468, 813
BsmFI GGGAC 4 cut(s) 95, 355, 641, 723
BsmI GAATGC 1 cut(s) 541
BsnI GGCC 5 cut(s) 57, 142, 324, 526, 1043
Bso31I GGTCTC 2 cut(s) 172, 1174
BsoBI CYCGRG 2 cut(s) 278, 319
Bsp119I TTCGAA 2 cut(s) 410, 1493
Bsp1286I GDGCHC 4 cut(s) 78, 86, 279, 596
Bsp13I TCCGGA 1 cut(s) 346
Bsp1407I TGTACA 1 cut(s) 1317
Bsp143I GATC 5 cut(s) 493, 558, 1052, 1117, 1752
Bsp1720I GCTNAGC 1 cut(s) 1212
BspACI CCGC 7 cut(s) 5, 116, 314, 779, 781, 872, 1160
BspANI GGCC 5 cut(s) 57, 142, 324, 526, 1043
BspCNI CTCAG 9 cut(s) 357, 645, 745, 966, 1009, 1011, 1030, 1184, 1371
BspEI TCCGGA 1 cut(s) 346
BspFNI CGCG 1 cut(s) 781
BspLI GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
BspPI GGATC 1 cut(s) 1760
BspQI GCTCTTC 2 cut(s) 125, 653
BspT104I TTCGAA 2 cut(s) 410, 1493
BspT107I GGYRCC 2 cut(s) 13, 327
BspTI CTTAAG 1 cut(s) 59
BspTNI GGTCTC 2 cut(s) 172, 1174
BsrBI CCGCTC 1 cut(s) 316
BsrDI GCAATG 1 cut(s) 647
BsrFI RCCGGY 5 cut(s) 68, 286, 324, 522, 526
BsrGI TGTACA 1 cut(s) 1317
BsrI ACTGG 4 cut(s) 276, 1562, 1648, 1712
BssAI RCCGGY 5 cut(s) 68, 286, 324, 522, 526
BssECI CCNNGG 7 cut(s) 278, 319, 692, 722, 779, 1426, 1722
BssMI GATC 5 cut(s) 493, 558, 1052, 1117, 1752
BssT1I CCWWGG 2 cut(s) 1426, 1722
Bst2UI CCWGG 3 cut(s) 18, 122, 945
Bst6I CTCTTC 5 cut(s) 125, 181, 418, 562, 653
BstAFI CTTAAG 1 cut(s) 59
BstAUI TGTACA 1 cut(s) 1317
BstBI TTCGAA 2 cut(s) 410, 1493
BstC8I GCNNGC 5 cut(s) 74, 86, 326, 959, 1111
BstDSI CCRYGG 1 cut(s) 779
BstEII GGTNACC 1 cut(s) 97
BstF5I GGATG 3 cut(s) 1415, 1636, 1717
BstFNI CGCG 1 cut(s) 781
BstHHI GCGC 1 cut(s) 1313
BstKTI GATC 5 cut(s) 496, 561, 1055, 1120, 1755
BstMBI GATC 5 cut(s) 493, 558, 1052, 1117, 1752
BstMCI CGRYCG 1 cut(s) 527
BstMWI GCNNNNNNNGC 9 cut(s) 11, 283, 827, 1013, 1040, 1091, 1106, 1190, 1736
BstNI CCWGG 3 cut(s) 18, 122, 945
BstPI GGTNACC 1 cut(s) 97
BstSCI CCNGG 8 cut(s) 16, 111, 120, 277, 278, 318, 319, 943
BstUI CGCG 1 cut(s) 781
BstV2I GAAGAC 3 cut(s) 1364, 1415, 1586
BstZI CGGCCG 1 cut(s) 524
BsuRI GGCC 5 cut(s) 57, 142, 324, 526, 1043
BtgI CCRYGG 1 cut(s) 779
BtsCI GGATG 3 cut(s) 1415, 1636, 1717
BtsI GCAGTG 2 cut(s) 1161, 1254
BtsIMutI CAGTG 4 cut(s) 503, 1016, 1161, 1254
Cac8I GCNNGC 5 cut(s) 74, 86, 326, 959, 1111
CaiI CAGNNNCTG 1 cut(s) 1550
CfoI GCGC 1 cut(s) 1313
Cfr10I RCCGGY 5 cut(s) 68, 286, 324, 522, 526
Cfr13I GGNCC 5 cut(s) 55, 118, 141, 322, 520
Cfr42I CCGCGG 1 cut(s) 782
Cfr9I CCCGGG 2 cut(s) 278, 319
CseI GACGC 1 cut(s) 638
Csp6I GTAC 4 cut(s) 507, 1318, 1643, 1715
CspCI CAANNNNNGTGG 2 cut(s) 1408, 1443
CviAII CATG 4 cut(s) 46, 547, 1276, 1597
CviQI GTAC 4 cut(s) 507, 1318, 1643, 1715
DpnI GATC 5 cut(s) 495, 560, 1054, 1119, 1754
DpnII GATC 5 cut(s) 493, 558, 1052, 1117, 1752
EaeI YGGCCR 1 cut(s) 524
EagI CGGCCG 1 cut(s) 524
Eam1104I CTCTTC 5 cut(s) 125, 181, 418, 562, 653
EarI CTCTTC 5 cut(s) 125, 181, 418, 562, 653
EciI GGCGGA 2 cut(s) 131, 1175
Ecl136II GAGCTC 1 cut(s) 84
EclXI CGGCCG 1 cut(s) 524
Eco130I CCWWGG 2 cut(s) 1426, 1722
Eco147I AGGCCT 1 cut(s) 1043
Eco24I GRGCYC 2 cut(s) 86, 279
Eco31I GGTCTC 2 cut(s) 172, 1174
Eco47I GGWCC 2 cut(s) 118, 520
Eco52I CGGCCG 1 cut(s) 524
Eco53kI GAGCTC 1 cut(s) 84
Eco57I CTGAAG 3 cut(s) 50, 77, 1173
Eco88I CYCGRG 2 cut(s) 278, 319
Eco91I GGTNACC 1 cut(s) 97
EcoICRI GAGCTC 1 cut(s) 84
EcoO65I GGTNACC 1 cut(s) 97
EcoRI GAATTC 4 cut(s) 21, 406, 1130, 1568
EcoRII CCWGG 3 cut(s) 16, 120, 943
EcoT14I CCWWGG 2 cut(s) 1426, 1722
EcoT38I GRGCYC 2 cut(s) 86, 279
ErhI CCWWGG 2 cut(s) 1426, 1722
Esp3I CGTCTC 2 cut(s) 468, 813
FaeI CATG 4 cut(s) 49, 550, 1279, 1600
FalI AAGNNNNNCTT 6 cut(s) 415, 447, 1297, 1329, 1349, 1381
FaqI GGGAC 4 cut(s) 95, 355, 641, 723
FatI CATG 4 cut(s) 45, 546, 1275, 1596
FbaI TGATCA 3 cut(s) 493, 558, 1117
FokI GGATG 3 cut(s) 1402, 1643, 1704
FriOI GRGCYC 2 cut(s) 86, 279
FspBI CTAG 3 cut(s) 420, 915, 1389
GlaI GCGC 1 cut(s) 1312
GsaI CCCAGC 3 cut(s) 248, 1106, 1554
GsuI CTGGAG 2 cut(s) 293, 843
HaeIII GGCC 5 cut(s) 57, 142, 324, 526, 1043
HgaI GACGC 1 cut(s) 638
HhaI GCGC 1 cut(s) 1313
Hin1II CATG 4 cut(s) 49, 550, 1279, 1600
Hin6I GCGC 1 cut(s) 1311
HinP1I GCGC 1 cut(s) 1311
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HindIII AAGCTT 1 cut(s) 1363
HinfI GANTC 7 cut(s) 173, 343, 643, 670, 727, 1438, 1765
HphI GGTGA 5 cut(s) 91, 461, 526, 541, 1361
Hpy166II GTNNAC 3 cut(s) 40, 265, 1267
Hpy188III TCNNGA 6 cut(s) 347, 1060, 1127, 1340, 1442, 1756
Hpy8I GTNNAC 3 cut(s) 40, 265, 1267
HpyAV CCTTC 7 cut(s) 367, 511, 684, 751, 1299, 1393, 1425
HpyCH4IV ACGT 3 cut(s) 192, 806, 1064
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 283, 827, 1013, 1040, 1091, 1106, 1190, 1736
HpySE526I ACGT 3 cut(s) 192, 806, 1064
Hsp92II CATG 4 cut(s) 49, 550, 1279, 1600
HspAI GCGC 1 cut(s) 1311
Kpn2I TCCGGA 1 cut(s) 346
KroI GCCGGC 1 cut(s) 324
KroNI GCCGGC 1 cut(s) 326
Ksp22I TGATCA 3 cut(s) 493, 558, 1117
KspI CCGCGG 1 cut(s) 782
Kzo9I GATC 5 cut(s) 493, 558, 1052, 1117, 1752
LguI GCTCTTC 2 cut(s) 125, 653
LmnI GCTCC 6 cut(s) 81, 274, 305, 321, 349, 696
LweI GCATC 5 cut(s) 228, 817, 1015, 1087, 1234
MaeI CTAG 3 cut(s) 420, 915, 1389
MaeII ACGT 3 cut(s) 192, 806, 1064
MaeIII GTNAC 3 cut(s) 97, 667, 799
MalI GATC 5 cut(s) 495, 560, 1054, 1119, 1754
MbiI CCGCTC 1 cut(s) 316
MboI GATC 5 cut(s) 493, 558, 1052, 1117, 1752
MhlI GDGCHC 4 cut(s) 78, 86, 279, 596
MlyI GAGTC 4 cut(s) 167, 337, 652, 664
MmeI TCCRAC 1 cut(s) 195
MroI TCCGGA 1 cut(s) 346
MroNI GCCGGC 1 cut(s) 324
MroXI GAANNNNTTC 1 cut(s) 1263
MseI TTAA 4 cut(s) 60, 1253, 1508, 1671
MspA1I CMGCKG 5 cut(s) 244, 781, 1193, 1378, 1484
MspCI CTTAAG 1 cut(s) 59
MspR9I CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 945
Mva1269I GAATGC 1 cut(s) 541
MvaI CCWGG 3 cut(s) 18, 122, 945
MvnI CGCG 1 cut(s) 781
MwoI GCNNNNNNNGC 9 cut(s) 11, 283, 827, 1013, 1040, 1091, 1106, 1190, 1736
NaeI GCCGGC 1 cut(s) 326
NciI CCSGG 5 cut(s) 113, 279, 280, 320, 321
NdeII GATC 5 cut(s) 493, 558, 1052, 1117, 1752
NgoMIV GCCGGC 1 cut(s) 324
NlaIII CATG 4 cut(s) 49, 550, 1279, 1600
NlaIV GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
NmeAIII GCCGAG 1 cut(s) 747
NmuCI GTSAC 3 cut(s) 97, 667, 799
NspV TTCGAA 2 cut(s) 410, 1493
PceI AGGCCT 1 cut(s) 1043
PciSI GCTCTTC 2 cut(s) 125, 653
PcsI WCGNNNNNNNCGW 1 cut(s) 689
PctI GAATGC 1 cut(s) 541
PdiI GCCGGC 1 cut(s) 326
PdmI GAANNNNTTC 1 cut(s) 1263
PfeI GAWTC 3 cut(s) 727, 1438, 1765
PflFI GACNNNGTC 2 cut(s) 107, 805
PflMI CCANNNNNTGG 1 cut(s) 1156
PleI GAGTC 4 cut(s) 167, 337, 651, 664
PpsI GAGTC 4 cut(s) 167, 337, 651, 664
PshBI ATTAAT 1 cut(s) 1671
Psp124BI GAGCTC 1 cut(s) 86
Psp6I CCWGG 3 cut(s) 16, 120, 943
PspEI GGTNACC 1 cut(s) 97
PspFI CCCAGC 3 cut(s) 244, 1102, 1550
PspGI CCWGG 3 cut(s) 16, 120, 943
PspN4I GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
PspPI GGNCC 5 cut(s) 55, 118, 141, 322, 520
PstNI CAGNNNCTG 1 cut(s) 1550
PsyI GACNNNGTC 2 cut(s) 107, 805
PvuII CAGCTG 4 cut(s) 244, 1193, 1378, 1484
RsaI GTAC 4 cut(s) 508, 1319, 1644, 1716
RsaNI GTAC 4 cut(s) 507, 1318, 1643, 1715
SacI GAGCTC 1 cut(s) 86
SacII CCGCGG 1 cut(s) 782
SapI GCTCTTC 2 cut(s) 125, 653
SaqAI TTAA 4 cut(s) 60, 1253, 1508, 1671
Sau3AI GATC 5 cut(s) 493, 558, 1052, 1117, 1752
Sau96I GGNCC 5 cut(s) 55, 118, 141, 322, 520
ScaI AGTACT 1 cut(s) 508
SchI GAGTC 4 cut(s) 167, 337, 652, 664
ScrFI CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 945
SduI GDGCHC 4 cut(s) 78, 86, 279, 596
SfaNI GCATC 5 cut(s) 228, 817, 1015, 1087, 1234
Sfr303I CCGCGG 1 cut(s) 782
SfuI TTCGAA 2 cut(s) 410, 1493
SgrAI CRCCGGYG 1 cut(s) 68
SgrBI CCGCGG 1 cut(s) 782
SinI GGWCC 2 cut(s) 118, 520
SmaI CCCGGG 2 cut(s) 280, 321
SmlI CTYRAG 2 cut(s) 59, 1058
SmoI CTYRAG 2 cut(s) 59, 1058
SpeI ACTAGT 1 cut(s) 914
SseBI AGGCCT 1 cut(s) 1043
SsiI CCGC 7 cut(s) 5, 116, 314, 779, 781, 872, 1160
SspMI CTAG 3 cut(s) 420, 915, 1389
SstI GAGCTC 1 cut(s) 86
StuI AGGCCT 1 cut(s) 1043
StyD4I CCNGG 8 cut(s) 16, 111, 120, 277, 278, 318, 319, 943
StyI CCWWGG 2 cut(s) 1426, 1722
TaiI ACGT 3 cut(s) 195, 809, 1067
TaqI TCGA 8 cut(s) 404, 410, 683, 890, 1128, 1283, 1298, 1493
TatI WGTACW 3 cut(s) 506, 1317, 1714
TauI GCSGC 3 cut(s) 8, 316, 784
TfiI GAWTC 3 cut(s) 727, 1438, 1765
Tru1I TTAA 4 cut(s) 60, 1253, 1508, 1671
Tru9I TTAA 4 cut(s) 60, 1253, 1508, 1671
TscAI CASTG 4 cut(s) 503, 1023, 1161, 1254
TseFI GTSAC 3 cut(s) 97, 667, 799
Tsp45I GTSAC 3 cut(s) 97, 667, 799
TspDTI ATGAA 4 cut(s) 62, 950, 1292, 1613
TspMI CCCGGG 2 cut(s) 278, 319
TspRI CASTG 4 cut(s) 503, 1023, 1161, 1254
Tth111I GACNNNGTC 2 cut(s) 107, 805
Van91I CCANNNNNTGG 1 cut(s) 1156
Vha464I CTTAAG 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 118, 520
VspI ATTAAT 1 cut(s) 1671
XapI RAATTY 5 cut(s) 21, 406, 481, 1130, 1568
XmaI CCCGGG 2 cut(s) 278, 319
XmnI GAANNNNTTC 1 cut(s) 1263
XspI CTAG 3 cut(s) 420, 915, 1389
ZrmI AGTACT 1 cut(s) 508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.