Rh4DG414100

Plant protein of unknown function (DUF936)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
62456676 .. 62459573
2898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG414100.1

Sequence Viewer

Length: 1761 bp
ATGGCGGCTCTGGCACCTGGAATTCTGCTGAAGCTCGTCAACTCCATGAACACGGGCCTTAAGCCCACCGGCGAGCACCGGAGCTCGCTTCTTCAGGTCACCGACATAGTCCCGGCGGACCTGGACGAGAAGAGCCTCTGGCCCACACAAGGGTTCTACATCAAGGTCTCCGACTCTTCCCACTCCATCTACGTCAGCCTCCCGTCGGAACAAGACGACATCGTTTTGAGCAACAAGATGCAGCTGGGTCAGTTTATATATGTGGACAGACTGGAGCCCGGGTCGCCGGTTCCGGTGGTCAAAGGAGCCAAGCCGCTCCCGGGCCGGCACCCTCTGATGGGGACTCCGGAGCCGTTGATGGGTCTGAGACAGAAGGGAGGAGGCGACAAAACAGAGCAGATGTCGAATTCGAAGCCGACTAGAAGAGGGTCTTGGGATTTGAATGGGGGTGATGTGGTTTCGTCTCCAATGGTGTTGAAGAATTTGGATTTTGATCAGTGTTATAGTACTCCGGTGAAGGACCGGCCGGTGAGGAATGCTGCGGCGATGTCTCCAATGATCAGGGGAAGGGTTGCAAGTGGTGGAGTTCGGTGCTCGTTTGGTGGTGGAGTTTTGGGGAAGATGGGGGACGCAAAGGGAGAGAGTCCATTGCTGAGGAAGAGCTGTGTGACTCCTTCAATGTCGAAGTTTCCGAGGAGCAAAAGCGTGTCTGATAGAGAGCCGAGGATTCCGATTAGTCCCTTCAACCAAGCTGAGAAGAAAAGCTCAACTCCACCACCGCGGTTGCGAAATGCAAGAGTGACAACGTCTCTCAATGTGGCTGGAGATGCACAAACCCCACAAAAGACCTCCAATTCAAAGCCGCAGTCTGCTAATGTGTCGAATGACAGCAACAGCAACAGCACTAGTCTCTGTCTTTCTATGAACTTACCAGGAAAACTCAGCACGCTTGGAAAAGAAGCTGTGCAGCAGCGAGAGACAGCTCAGAAGATTGCCCTCAATGCACTGAGAGATGCTTCGGCTACTGAGGCCTTAGTCCGATCACTCAAGACGTTTTCAAACTTGTGCAAAGCAGCTAAAGCAGATGCCCCAGCAGCCTGCTTTGATCAATTTCTCGAATTCCATCAGCAAGTTGTCCAAGCAGTGGCGGAAATGGTCTCAGTTCAAGCAGCTACTTCAGCTGCTGAAACACCAAATGCTAAGCAGCAGAGAGACAAAGAAGAAGAAGAAGATGCAGTGTTAAACGAAATGGTTCACAACTCCATGAACTCGAAATTGAGCTTATCGAAAAGAAGGTGCGCTTTGTACAAGTCAGTTGCAACCATTCCCGAAAGAGGTGAGCAGAAGACAAGCTTCGAGAAACAGCTGAGAGCCTCTAGTAATCAGAAGGAAAGGAAGACACCATCCACTCCCCTTGGAAAGCTGAATCTTGAAACCATTGGCGAGAATGATGAGAACAAGAAACCACCAGCTGTTTCTTCGAACTCTTGCAGCTTAACCAATACAATCAAATTGGGGAAGCAGATTGAAACAGAAGCTGGGAACTGGTTTATGGAATTCTTGGAGAAGACTTTGGAGAAAGGCATGAAGAAAACAAAAGGCACAACAACGGATGGGGATGTGCGAAAAGTACCCCAGTCTTTGATACTTAGAGTGATTAATTGGGTGGAAATACAACAATGTGATAGCAGTAAGCGACCAGTACATCCCAAGGCAGCACAAGTAGCCAGAAAGTTGAGGATCAAGATGAAGAATCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

586

Amino Acids

63.76

Weight (kDa)

9.61

Isoelectric Point (pI)

46.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF936 PF06075 4 - 120 1.1e-47 Plant protein of unknown function (DUF936)
DUF6857 PF21647 309 - 559 1.3e-31 Domain of unknown function (DUF6857)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011337)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 13, 327
AccB7I CCANNNNNTGG 1 cut(s) 1144
AccBSI CCGCTC 1 cut(s) 316
AccII CGCG 1 cut(s) 781
AccIII TCCGGA 1 cut(s) 346
AciI CCGC 8 cut(s) 5, 116, 314, 542, 779, 781, 863, 1148
AclWI GGATC 1 cut(s) 1748
AcoI YGGCCR 1 cut(s) 524
AcsI RAATTY 5 cut(s) 21, 406, 481, 1118, 1556
AcuI CTGAAG 3 cut(s) 50, 77, 1161
AfaI GTAC 4 cut(s) 508, 1307, 1632, 1704
AfiI CCNNNNNNNGG 9 cut(s) 149, 150, 205, 320, 337, 338, 359, 1144, 1334
AflII CTTAAG 1 cut(s) 59
AgsI TTSAA 9 cut(s) 442, 478, 678, 745, 858, 1059, 1166, 1433, 1529
AhlI ACTAGT 1 cut(s) 905
AjnI CCWGG 3 cut(s) 16, 120, 931
AjuI GAANNNNNNNTTGG 2 cut(s) 415, 447
Alw21I GWGCWC 3 cut(s) 78, 86, 596
Alw26I GTCTC 9 cut(s) 172, 361, 468, 555, 813, 914, 971, 1162, 1206
AlwI GGATC 1 cut(s) 1748
AlwNI CAGNNNCTG 2 cut(s) 1184, 1538
Ama87I CYCGRG 2 cut(s) 278, 319
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 5 cut(s) 55, 140, 322, 524, 1029
ApoI RAATTY 5 cut(s) 21, 406, 481, 1118, 1556
ArsI GACNNNNNNTTYG 2 cut(s) 851, 883
AseI ATTAAT 1 cut(s) 1659
Asp700I GAANNNNTTC 1 cut(s) 1251
AspLEI GCGC 1 cut(s) 1301
AspS9I GGNCC 5 cut(s) 55, 118, 141, 322, 520
AsuC2I CCSGG 5 cut(s) 113, 279, 280, 320, 321
AsuHPI GGTGA 5 cut(s) 91, 461, 526, 541, 1349
AsuII TTCGAA 2 cut(s) 410, 1481
AvaI CYCGRG 2 cut(s) 278, 319
AvaII GGWCC 2 cut(s) 118, 520
BanI GGYRCC 2 cut(s) 13, 327
BanII GRGCYC 2 cut(s) 86, 279
BbsI GAAGAC 3 cut(s) 1352, 1403, 1574
Bbv12I GWGCWC 3 cut(s) 78, 86, 596
BbvCI CCTCAGC 1 cut(s) 653
BccI CCATC 7 cut(s) 194, 331, 352, 616, 1131, 1411, 1607
BceAI ACGGC 1 cut(s) 337
BciT130I CCWGG 3 cut(s) 18, 122, 933
BclI TGATCA 3 cut(s) 493, 558, 1105
BcnI CCSGG 5 cut(s) 113, 279, 280, 320, 321
BcoDI GTCTC 9 cut(s) 172, 361, 468, 555, 813, 914, 971, 1162, 1206
BcuI ACTAGT 1 cut(s) 905
BfaI CTAG 3 cut(s) 420, 906, 1377
BfrI CTTAAG 1 cut(s) 59
BlpI GCTNAGC 1 cut(s) 1200
BmcAI AGTACT 1 cut(s) 508
Bme1390I CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 933
Bme18I GGWCC 2 cut(s) 118, 520
BmeT110I CYCGRG 2 cut(s) 278, 319
BmgT120I GGNCC 5 cut(s) 55, 118, 141, 322, 520
BmiI GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
BmrFI CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 933
BmrI ACTGGG 1 cut(s) 1630
BmsI GCATC 5 cut(s) 228, 817, 1003, 1075, 1222
BmuI ACTGGG 1 cut(s) 1630
BpiI GAAGAC 3 cut(s) 1352, 1403, 1574
BpmI CTGGAG 2 cut(s) 293, 843
Bpu10I CCTNAGC 1 cut(s) 653
Bpu1102I GCTNAGC 1 cut(s) 1200
Bpu14I TTCGAA 2 cut(s) 410, 1481
BpuEI CTTGAG 1 cut(s) 1031
BpuMI CCSGG 5 cut(s) 113, 279, 280, 320, 321
BsaBI GATNNNNATC 1 cut(s) 492
BsaI GGTCTC 2 cut(s) 172, 1162
BsaJI CCNNGG 7 cut(s) 278, 319, 692, 722, 779, 1414, 1710
BsaWI WCCGGW 4 cut(s) 78, 292, 346, 511
BsaXI ACNNNNNCTCC 2 cut(s) 266, 296
Bsc4I CCNNNNNNNGG 9 cut(s) 149, 150, 205, 320, 337, 338, 359, 1144, 1334
Bse118I RCCGGY 5 cut(s) 68, 286, 324, 522, 526
Bse1I ACTGG 4 cut(s) 276, 1550, 1636, 1700
Bse3DI GCAATG 1 cut(s) 647
Bse8I GATNNNNATC 1 cut(s) 492
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 3 cut(s) 18, 122, 933
BseDI CCNNGG 7 cut(s) 278, 319, 692, 722, 779, 1414, 1710
BseGI GGATG 4 cut(s) 1403, 1618, 1624, 1705
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 9 cut(s) 149, 150, 205, 320, 337, 338, 359, 1144, 1334
BseMI GCAATG 1 cut(s) 647
BseMII CTCAG 9 cut(s) 356, 644, 744, 955, 998, 998, 1017, 1173, 1358
BseNI ACTGG 4 cut(s) 276, 1550, 1636, 1700
BseRI GAGGAG 2 cut(s) 393, 709
BseX3I CGGCCG 1 cut(s) 524
BseYI CCCAGC 3 cut(s) 244, 1090, 1538
BsgI GTGCAG 1 cut(s) 986
Bsh1236I CGCG 1 cut(s) 781
Bsh1285I CGRYCG 1 cut(s) 527
BshFI GGCC 5 cut(s) 57, 142, 324, 526, 1031
BshNI GGYRCC 2 cut(s) 13, 327
BsiEI CGRYCG 1 cut(s) 527
BsiHKAI GWGCWC 3 cut(s) 78, 86, 596
BsiHKCI CYCGRG 2 cut(s) 278, 319
BslFI GGGAC 4 cut(s) 95, 355, 641, 723
BslI CCNNNNNNNGG 9 cut(s) 149, 150, 205, 320, 337, 338, 359, 1144, 1334
BsmAI GTCTC 9 cut(s) 172, 361, 468, 555, 813, 914, 971, 1162, 1206
BsmBI CGTCTC 2 cut(s) 468, 813
BsmFI GGGAC 4 cut(s) 95, 355, 641, 723
BsmI GAATGC 1 cut(s) 541
BsnI GGCC 5 cut(s) 57, 142, 324, 526, 1031
Bso31I GGTCTC 2 cut(s) 172, 1162
BsoBI CYCGRG 2 cut(s) 278, 319
Bsp119I TTCGAA 2 cut(s) 410, 1481
Bsp1286I GDGCHC 4 cut(s) 78, 86, 279, 596
Bsp13I TCCGGA 1 cut(s) 346
Bsp1407I TGTACA 1 cut(s) 1305
Bsp143I GATC 5 cut(s) 493, 558, 1040, 1105, 1740
Bsp1720I GCTNAGC 1 cut(s) 1200
BspACI CCGC 8 cut(s) 5, 116, 314, 542, 779, 781, 863, 1148
BspANI GGCC 5 cut(s) 57, 142, 324, 526, 1031
BspCNI CTCAG 9 cut(s) 357, 645, 745, 954, 997, 999, 1018, 1172, 1359
BspEI TCCGGA 1 cut(s) 346
BspFNI CGCG 1 cut(s) 781
BspLI GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
BspPI GGATC 1 cut(s) 1748
BspQI GCTCTTC 2 cut(s) 125, 653
BspT104I TTCGAA 2 cut(s) 410, 1481
BspT107I GGYRCC 2 cut(s) 13, 327
BspTI CTTAAG 1 cut(s) 59
BspTNI GGTCTC 2 cut(s) 172, 1162
BsrBI CCGCTC 1 cut(s) 316
BsrDI GCAATG 1 cut(s) 647
BsrFI RCCGGY 5 cut(s) 68, 286, 324, 522, 526
BsrGI TGTACA 1 cut(s) 1305
BsrI ACTGG 4 cut(s) 276, 1550, 1636, 1700
BssAI RCCGGY 5 cut(s) 68, 286, 324, 522, 526
BssECI CCNNGG 7 cut(s) 278, 319, 692, 722, 779, 1414, 1710
BssMI GATC 5 cut(s) 493, 558, 1040, 1105, 1740
BssT1I CCWWGG 2 cut(s) 1414, 1710
Bst2UI CCWGG 3 cut(s) 18, 122, 933
Bst6I CTCTTC 4 cut(s) 125, 181, 418, 653
BstAFI CTTAAG 1 cut(s) 59
BstAUI TGTACA 1 cut(s) 1305
BstBI TTCGAA 2 cut(s) 410, 1481
BstC8I GCNNGC 5 cut(s) 74, 86, 326, 947, 1099
BstDSI CCRYGG 1 cut(s) 779
BstEII GGTNACC 1 cut(s) 97
BstF5I GGATG 4 cut(s) 1403, 1618, 1624, 1705
BstFNI CGCG 1 cut(s) 781
BstHHI GCGC 1 cut(s) 1301
BstKTI GATC 5 cut(s) 496, 561, 1043, 1108, 1743
BstMAI GTCTC 9 cut(s) 172, 361, 468, 555, 813, 914, 971, 1162, 1206
BstMBI GATC 5 cut(s) 493, 558, 1040, 1105, 1740
BstMCI CGRYCG 1 cut(s) 527
BstMWI GCNNNNNNNGC 9 cut(s) 11, 283, 827, 1001, 1028, 1079, 1094, 1178, 1724
BstNI CCWGG 3 cut(s) 18, 122, 933
BstPI GGTNACC 1 cut(s) 97
BstSCI CCNGG 8 cut(s) 16, 111, 120, 277, 278, 318, 319, 931
BstUI CGCG 1 cut(s) 781
BstV2I GAAGAC 3 cut(s) 1352, 1403, 1574
BstZI CGGCCG 1 cut(s) 524
BsuRI GGCC 5 cut(s) 57, 142, 324, 526, 1031
BtgI CCRYGG 1 cut(s) 779
BtgZI GCGATG 1 cut(s) 560
BtsCI GGATG 4 cut(s) 1403, 1618, 1624, 1705
BtsI GCAGTG 2 cut(s) 1149, 1242
BtsIMutI CAGTG 4 cut(s) 503, 1004, 1149, 1242
Cac8I GCNNGC 5 cut(s) 74, 86, 326, 947, 1099
CaiI CAGNNNCTG 2 cut(s) 1184, 1538
CfoI GCGC 1 cut(s) 1301
Cfr10I RCCGGY 5 cut(s) 68, 286, 324, 522, 526
Cfr13I GGNCC 5 cut(s) 55, 118, 141, 322, 520
Cfr42I CCGCGG 1 cut(s) 782
Cfr9I CCCGGG 2 cut(s) 278, 319
CseI GACGC 1 cut(s) 638
Csp6I GTAC 4 cut(s) 507, 1306, 1631, 1703
CspCI CAANNNNNGTGG 4 cut(s) 765, 800, 1396, 1431
CviAII CATG 3 cut(s) 46, 1264, 1585
CviQI GTAC 4 cut(s) 507, 1306, 1631, 1703
DpnI GATC 5 cut(s) 495, 560, 1042, 1107, 1742
DpnII GATC 5 cut(s) 493, 558, 1040, 1105, 1740
EaeI YGGCCR 1 cut(s) 524
EagI CGGCCG 1 cut(s) 524
Eam1104I CTCTTC 4 cut(s) 125, 181, 418, 653
EarI CTCTTC 4 cut(s) 125, 181, 418, 653
EciI GGCGGA 2 cut(s) 131, 1163
Ecl136II GAGCTC 1 cut(s) 84
EclXI CGGCCG 1 cut(s) 524
Eco130I CCWWGG 2 cut(s) 1414, 1710
Eco147I AGGCCT 1 cut(s) 1031
Eco24I GRGCYC 2 cut(s) 86, 279
Eco31I GGTCTC 2 cut(s) 172, 1162
Eco47I GGWCC 2 cut(s) 118, 520
Eco52I CGGCCG 1 cut(s) 524
Eco53kI GAGCTC 1 cut(s) 84
Eco57I CTGAAG 3 cut(s) 50, 77, 1161
Eco88I CYCGRG 2 cut(s) 278, 319
Eco91I GGTNACC 1 cut(s) 97
EcoICRI GAGCTC 1 cut(s) 84
EcoO65I GGTNACC 1 cut(s) 97
EcoRI GAATTC 4 cut(s) 21, 406, 1118, 1556
EcoRII CCWGG 3 cut(s) 16, 120, 931
EcoT14I CCWWGG 2 cut(s) 1414, 1710
EcoT38I GRGCYC 2 cut(s) 86, 279
ErhI CCWWGG 2 cut(s) 1414, 1710
Esp3I CGTCTC 2 cut(s) 468, 813
FaeI CATG 3 cut(s) 49, 1267, 1588
FalI AAGNNNNNCTT 6 cut(s) 415, 447, 1285, 1317, 1337, 1369
FaqI GGGAC 4 cut(s) 95, 355, 641, 723
FatI CATG 3 cut(s) 45, 1263, 1584
FbaI TGATCA 3 cut(s) 493, 558, 1105
FokI GGATG 4 cut(s) 1390, 1625, 1631, 1692
FriOI GRGCYC 2 cut(s) 86, 279
FspBI CTAG 3 cut(s) 420, 906, 1377
GlaI GCGC 1 cut(s) 1300
GsaI CCCAGC 3 cut(s) 248, 1094, 1542
GsuI CTGGAG 2 cut(s) 293, 843
HaeIII GGCC 5 cut(s) 57, 142, 324, 526, 1031
HgaI GACGC 1 cut(s) 638
HhaI GCGC 1 cut(s) 1301
Hin1II CATG 3 cut(s) 49, 1267, 1588
Hin6I GCGC 1 cut(s) 1299
HinP1I GCGC 1 cut(s) 1299
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HindIII AAGCTT 1 cut(s) 1351
HinfI GANTC 7 cut(s) 173, 343, 643, 670, 727, 1426, 1753
HphI GGTGA 5 cut(s) 91, 461, 526, 541, 1349
Hpy166II GTNNAC 3 cut(s) 40, 265, 1255
Hpy188III TCNNGA 7 cut(s) 347, 1048, 1115, 1328, 1357, 1430, 1744
Hpy8I GTNNAC 3 cut(s) 40, 265, 1255
Hpy99I CGWCG 1 cut(s) 208
HpyAV CCTTC 7 cut(s) 367, 511, 561, 684, 751, 1287, 1381
HpyCH4IV ACGT 3 cut(s) 192, 806, 1052
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 283, 827, 1001, 1028, 1079, 1094, 1178, 1724
HpySE526I ACGT 3 cut(s) 192, 806, 1052
Hsp92II CATG 3 cut(s) 49, 1267, 1588
HspAI GCGC 1 cut(s) 1299
Kpn2I TCCGGA 1 cut(s) 346
KroI GCCGGC 1 cut(s) 324
KroNI GCCGGC 1 cut(s) 326
Ksp22I TGATCA 3 cut(s) 493, 558, 1105
KspI CCGCGG 1 cut(s) 782
Kzo9I GATC 5 cut(s) 493, 558, 1040, 1105, 1740
LguI GCTCTTC 2 cut(s) 125, 653
LmnI GCTCC 6 cut(s) 81, 274, 305, 321, 349, 696
LweI GCATC 5 cut(s) 228, 817, 1003, 1075, 1222
MaeI CTAG 3 cut(s) 420, 906, 1377
MaeII ACGT 3 cut(s) 192, 806, 1052
MaeIII GTNAC 3 cut(s) 97, 667, 799
MalI GATC 5 cut(s) 495, 560, 1042, 1107, 1742
MbiI CCGCTC 1 cut(s) 316
MboI GATC 5 cut(s) 493, 558, 1040, 1105, 1740
MhlI GDGCHC 4 cut(s) 78, 86, 279, 596
MlyI GAGTC 4 cut(s) 167, 337, 652, 664
MmeI TCCRAC 2 cut(s) 186, 195
MroI TCCGGA 1 cut(s) 346
MroNI GCCGGC 1 cut(s) 324
MroXI GAANNNNTTC 1 cut(s) 1251
MseI TTAA 4 cut(s) 60, 1241, 1496, 1659
MspA1I CMGCKG 5 cut(s) 244, 781, 1181, 1366, 1472
MspCI CTTAAG 1 cut(s) 59
MspR9I CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 933
Mva1269I GAATGC 1 cut(s) 541
MvaI CCWGG 3 cut(s) 18, 122, 933
MvnI CGCG 1 cut(s) 781
MwoI GCNNNNNNNGC 9 cut(s) 11, 283, 827, 1001, 1028, 1079, 1094, 1178, 1724
NaeI GCCGGC 1 cut(s) 326
NciI CCSGG 5 cut(s) 113, 279, 280, 320, 321
NdeII GATC 5 cut(s) 493, 558, 1040, 1105, 1740
NgoMIV GCCGGC 1 cut(s) 324
NlaIII CATG 3 cut(s) 49, 1267, 1588
NlaIV GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
NmeAIII GCCGAG 1 cut(s) 747
NmuCI GTSAC 3 cut(s) 97, 667, 799
NspV TTCGAA 2 cut(s) 410, 1481
PceI AGGCCT 1 cut(s) 1031
PciSI GCTCTTC 2 cut(s) 125, 653
PcsI WCGNNNNNNNCGW 1 cut(s) 689
PctI GAATGC 1 cut(s) 541
PdiI GCCGGC 1 cut(s) 326
PdmI GAANNNNTTC 1 cut(s) 1251
PfeI GAWTC 3 cut(s) 727, 1426, 1753
PflFI GACNNNGTC 2 cut(s) 107, 805
PflMI CCANNNNNTGG 1 cut(s) 1144
PleI GAGTC 4 cut(s) 167, 337, 651, 664
PpsI GAGTC 4 cut(s) 167, 337, 651, 664
PshBI ATTAAT 1 cut(s) 1659
Psp124BI GAGCTC 1 cut(s) 86
Psp6I CCWGG 3 cut(s) 16, 120, 931
PspEI GGTNACC 1 cut(s) 97
PspFI CCCAGC 3 cut(s) 244, 1090, 1538
PspGI CCWGG 3 cut(s) 16, 120, 931
PspN4I GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
PspPI GGNCC 5 cut(s) 55, 118, 141, 322, 520
PstNI CAGNNNCTG 2 cut(s) 1184, 1538
PsyI GACNNNGTC 2 cut(s) 107, 805
PvuII CAGCTG 4 cut(s) 244, 1181, 1366, 1472
RsaI GTAC 4 cut(s) 508, 1307, 1632, 1704
RsaNI GTAC 4 cut(s) 507, 1306, 1631, 1703
SacI GAGCTC 1 cut(s) 86
SacII CCGCGG 1 cut(s) 782
SapI GCTCTTC 2 cut(s) 125, 653
SaqAI TTAA 4 cut(s) 60, 1241, 1496, 1659
Sau3AI GATC 5 cut(s) 493, 558, 1040, 1105, 1740
Sau96I GGNCC 5 cut(s) 55, 118, 141, 322, 520
ScaI AGTACT 1 cut(s) 508
SchI GAGTC 4 cut(s) 167, 337, 652, 664
ScrFI CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 933
SduI GDGCHC 4 cut(s) 78, 86, 279, 596
SfaNI GCATC 5 cut(s) 228, 817, 1003, 1075, 1222
Sfr303I CCGCGG 1 cut(s) 782
SfuI TTCGAA 2 cut(s) 410, 1481
SgrAI CRCCGGYG 1 cut(s) 68
SgrBI CCGCGG 1 cut(s) 782
SinI GGWCC 2 cut(s) 118, 520
SmaI CCCGGG 2 cut(s) 280, 321
SmlI CTYRAG 2 cut(s) 59, 1046
SmoI CTYRAG 2 cut(s) 59, 1046
SpeI ACTAGT 1 cut(s) 905
SseBI AGGCCT 1 cut(s) 1031
SsiI CCGC 8 cut(s) 5, 116, 314, 542, 779, 781, 863, 1148
SspMI CTAG 3 cut(s) 420, 906, 1377
SstI GAGCTC 1 cut(s) 86
StuI AGGCCT 1 cut(s) 1031
StyD4I CCNGG 8 cut(s) 16, 111, 120, 277, 278, 318, 319, 931
StyI CCWWGG 2 cut(s) 1414, 1710
TaiI ACGT 3 cut(s) 195, 809, 1055
TaqI TCGA 9 cut(s) 404, 410, 683, 881, 1116, 1271, 1286, 1356, 1481
TatI WGTACW 3 cut(s) 506, 1305, 1702
TauI GCSGC 4 cut(s) 8, 316, 545, 865
TfiI GAWTC 3 cut(s) 727, 1426, 1753
Tru1I TTAA 4 cut(s) 60, 1241, 1496, 1659
Tru9I TTAA 4 cut(s) 60, 1241, 1496, 1659
TscAI CASTG 4 cut(s) 503, 1011, 1149, 1242
TseFI GTSAC 3 cut(s) 97, 667, 799
Tsp45I GTSAC 3 cut(s) 97, 667, 799
TspDTI ATGAA 4 cut(s) 62, 938, 1280, 1601
TspGWI ACGGA 1 cut(s) 1625
TspMI CCCGGG 2 cut(s) 278, 319
TspRI CASTG 4 cut(s) 503, 1011, 1149, 1242
Tth111I GACNNNGTC 2 cut(s) 107, 805
Van91I CCANNNNNTGG 1 cut(s) 1144
Vha464I CTTAAG 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 118, 520
VspI ATTAAT 1 cut(s) 1659
XapI RAATTY 5 cut(s) 21, 406, 481, 1118, 1556
XmaI CCCGGG 2 cut(s) 278, 319
XmnI GAANNNNTTC 1 cut(s) 1251
XspI CTAG 3 cut(s) 420, 906, 1377
ZrmI AGTACT 1 cut(s) 508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.