Plant protein of unknown function (DUF936)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23790 AT1G70340 |
| fragaria_vesca | FvH4_4g34410 FvH4_4g34410 |
| malus_domestica | MD13G1091800.v1.1 MD16G1092400.v1.1 |
| prunus_persica | Prupe.1G254000_v2.0.a1 |
| pyrus_communis | pycom13g07970 pycom16g07880 |
| rosa_chinensis | RchiOBHm_Chr4g0443831 |
| rosa_laevigata | RLG00000005884 |
| rosa_multiflora | Rmu_sc0005632.1_g000006 Rmu_sc0026423.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00384400 |
| rosa_rugosa | Rorug04G0347700 |
| rosa_samantha | Rh4AG407900 Rh4BG418900 Rh4CG433000 Rh4DG414100 |
| rosa_wichuraiana | Rw4G035030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 13, 327 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1141 |
| AccBSI | CCGCTC | 1 cut(s) | 316 |
| AccIII | TCCGGA | 1 cut(s) | 346 |
| AciI | CCGC | 7 cut(s) | 5, 116, 314, 542, 579, 872, 1145 |
| AclWI | GGATC | 1 cut(s) | 1694 |
| AcoI | YGGCCR | 1 cut(s) | 524 |
| AcsI | RAATTY | 5 cut(s) | 21, 406, 481, 1115, 1502 |
| AcuI | CTGAAG | 3 cut(s) | 50, 77, 1158 |
| AfaI | GTAC | 4 cut(s) | 508, 1304, 1578, 1650 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 149, 150, 205, 320, 337, 338, 359, 1141, 1331 |
| AflII | CTTAAG | 1 cut(s) | 59 |
| AgsI | TTSAA | 8 cut(s) | 442, 478, 678, 745, 858, 1056, 1163, 1475 |
| AhlI | ACTAGT | 1 cut(s) | 902 |
| AjnI | CCWGG | 3 cut(s) | 16, 120, 928 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 415, 447 |
| Alw21I | GWGCWC | 3 cut(s) | 78, 86, 596 |
| Alw26I | GTCTC | 9 cut(s) | 172, 361, 468, 555, 813, 911, 968, 1159, 1203 |
| AlwI | GGATC | 1 cut(s) | 1694 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1484 |
| Ama87I | CYCGRG | 2 cut(s) | 278, 319 |
| Aor13HI | TCCGGA | 1 cut(s) | 346 |
| AoxI | GGCC | 5 cut(s) | 55, 140, 322, 524, 1026 |
| ApoI | RAATTY | 5 cut(s) | 21, 406, 481, 1115, 1502 |
| AseI | ATTAAT | 1 cut(s) | 1605 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1248 |
| AspLEI | GCGC | 1 cut(s) | 1298 |
| AspS9I | GGNCC | 5 cut(s) | 55, 118, 141, 322, 520 |
| AsuC2I | CCSGG | 6 cut(s) | 113, 279, 280, 320, 321, 781 |
| AsuHPI | GGTGA | 4 cut(s) | 91, 461, 526, 1346 |
| AsuII | TTCGAA | 2 cut(s) | 410, 1427 |
| AvaI | CYCGRG | 2 cut(s) | 278, 319 |
| AvaII | GGWCC | 2 cut(s) | 118, 520 |
| BanI | GGYRCC | 2 cut(s) | 13, 327 |
| BanII | GRGCYC | 2 cut(s) | 86, 279 |
| BbsI | GAAGAC | 3 cut(s) | 1349, 1400, 1520 |
| Bbv12I | GWGCWC | 3 cut(s) | 78, 86, 596 |
| BbvCI | CCTCAGC | 1 cut(s) | 653 |
| BccI | CCATC | 7 cut(s) | 194, 331, 352, 616, 1128, 1408, 1553 |
| BceAI | ACGGC | 1 cut(s) | 337 |
| BciT130I | CCWGG | 3 cut(s) | 18, 122, 930 |
| BclI | TGATCA | 2 cut(s) | 493, 558 |
| BcnI | CCSGG | 6 cut(s) | 113, 279, 280, 320, 321, 781 |
| BcoDI | GTCTC | 9 cut(s) | 172, 361, 468, 555, 813, 911, 968, 1159, 1203 |
| BcuI | ACTAGT | 1 cut(s) | 902 |
| BfaI | CTAG | 3 cut(s) | 420, 903, 1374 |
| BfrI | CTTAAG | 1 cut(s) | 59 |
| BlpI | GCTNAGC | 1 cut(s) | 1197 |
| BmcAI | AGTACT | 1 cut(s) | 508 |
| Bme1390I | CCNGG | 9 cut(s) | 18, 113, 122, 279, 280, 320, 321, 781, 930 |
| Bme18I | GGWCC | 2 cut(s) | 118, 520 |
| BmeT110I | CYCGRG | 2 cut(s) | 278, 319 |
| BmgT120I | GGNCC | 5 cut(s) | 55, 118, 141, 322, 520 |
| BmiI | GGNNCC | 6 cut(s) | 15, 276, 291, 307, 329, 351 |
| BmrFI | CCNGG | 9 cut(s) | 18, 113, 122, 279, 280, 320, 321, 781, 930 |
| BmrI | ACTGGG | 1 cut(s) | 1576 |
| BmsI | GCATC | 5 cut(s) | 228, 817, 1000, 1072, 1219 |
| BmuI | ACTGGG | 1 cut(s) | 1576 |
| BpiI | GAAGAC | 3 cut(s) | 1349, 1400, 1520 |
| BpmI | CTGGAG | 2 cut(s) | 293, 843 |
| Bpu10I | CCTNAGC | 1 cut(s) | 653 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1197 |
| Bpu14I | TTCGAA | 2 cut(s) | 410, 1427 |
| BpuEI | CTTGAG | 1 cut(s) | 1028 |
| BpuMI | CCSGG | 6 cut(s) | 113, 279, 280, 320, 321, 781 |
| BsaBI | GATNNNNATC | 1 cut(s) | 492 |
| BsaI | GGTCTC | 2 cut(s) | 172, 1159 |
| BsaJI | CCNNGG | 6 cut(s) | 278, 319, 722, 779, 1411, 1656 |
| BsaWI | WCCGGW | 4 cut(s) | 78, 292, 346, 511 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 266, 296 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 149, 150, 205, 320, 337, 338, 359, 1141, 1331 |
| Bse118I | RCCGGY | 5 cut(s) | 68, 286, 324, 522, 526 |
| Bse1I | ACTGG | 4 cut(s) | 276, 1496, 1582, 1646 |
| Bse3DI | GCAATG | 1 cut(s) | 647 |
| Bse8I | GATNNNNATC | 1 cut(s) | 492 |
| BseAI | TCCGGA | 1 cut(s) | 346 |
| BseBI | CCWGG | 3 cut(s) | 18, 122, 930 |
| BseDI | CCNNGG | 6 cut(s) | 278, 319, 722, 779, 1411, 1656 |
| BseGI | GGATG | 4 cut(s) | 1400, 1564, 1570, 1651 |
| BseJI | GATNNNNATC | 1 cut(s) | 492 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 149, 150, 205, 320, 337, 338, 359, 1141, 1331 |
| BseMI | GCAATG | 1 cut(s) | 647 |
| BseMII | CTCAG | 9 cut(s) | 356, 644, 744, 952, 995, 995, 1014, 1170, 1355 |
| BseNI | ACTGG | 4 cut(s) | 276, 1496, 1582, 1646 |
| BseRI | GAGGAG | 2 cut(s) | 393, 709 |
| BseX3I | CGGCCG | 1 cut(s) | 524 |
| BseYI | CCCAGC | 3 cut(s) | 244, 1087, 1484 |
| BsgI | GTGCAG | 1 cut(s) | 983 |
| Bsh1285I | CGRYCG | 1 cut(s) | 527 |
| BshFI | GGCC | 5 cut(s) | 57, 142, 324, 526, 1028 |
| BshNI | GGYRCC | 2 cut(s) | 13, 327 |
| BsiEI | CGRYCG | 1 cut(s) | 527 |
| BsiHKAI | GWGCWC | 3 cut(s) | 78, 86, 596 |
| BsiHKCI | CYCGRG | 2 cut(s) | 278, 319 |
| BslFI | GGGAC | 4 cut(s) | 95, 355, 641, 723 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 149, 150, 205, 320, 337, 338, 359, 1141, 1331 |
| BsmAI | GTCTC | 9 cut(s) | 172, 361, 468, 555, 813, 911, 968, 1159, 1203 |
| BsmBI | CGTCTC | 2 cut(s) | 468, 813 |
| BsmFI | GGGAC | 4 cut(s) | 95, 355, 641, 723 |
| BsmI | GAATGC | 1 cut(s) | 541 |
| BsnI | GGCC | 5 cut(s) | 57, 142, 324, 526, 1028 |
| Bso31I | GGTCTC | 2 cut(s) | 172, 1159 |
| BsoBI | CYCGRG | 2 cut(s) | 278, 319 |
| Bsp119I | TTCGAA | 2 cut(s) | 410, 1427 |
| Bsp1286I | GDGCHC | 4 cut(s) | 78, 86, 279, 596 |
| Bsp13I | TCCGGA | 1 cut(s) | 346 |
| Bsp1407I | TGTACA | 1 cut(s) | 1302 |
| Bsp143I | GATC | 4 cut(s) | 493, 558, 1037, 1686 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1197 |
| BspACI | CCGC | 7 cut(s) | 5, 116, 314, 542, 579, 872, 1145 |
| BspANI | GGCC | 5 cut(s) | 57, 142, 324, 526, 1028 |
| BspCNI | CTCAG | 9 cut(s) | 357, 645, 745, 951, 994, 996, 1015, 1169, 1356 |
| BspEI | TCCGGA | 1 cut(s) | 346 |
| BspLI | GGNNCC | 6 cut(s) | 15, 276, 291, 307, 329, 351 |
| BspPI | GGATC | 1 cut(s) | 1694 |
| BspQI | GCTCTTC | 2 cut(s) | 125, 653 |
| BspT104I | TTCGAA | 2 cut(s) | 410, 1427 |
| BspT107I | GGYRCC | 2 cut(s) | 13, 327 |
| BspTI | CTTAAG | 1 cut(s) | 59 |
| BspTNI | GGTCTC | 2 cut(s) | 172, 1159 |
| BsrBI | CCGCTC | 1 cut(s) | 316 |
| BsrDI | GCAATG | 1 cut(s) | 647 |
| BsrFI | RCCGGY | 5 cut(s) | 68, 286, 324, 522, 526 |
| BsrGI | TGTACA | 1 cut(s) | 1302 |
| BsrI | ACTGG | 4 cut(s) | 276, 1496, 1582, 1646 |
| BssAI | RCCGGY | 5 cut(s) | 68, 286, 324, 522, 526 |
| BssECI | CCNNGG | 6 cut(s) | 278, 319, 722, 779, 1411, 1656 |
| BssMI | GATC | 4 cut(s) | 493, 558, 1037, 1686 |
| BssT1I | CCWWGG | 2 cut(s) | 1411, 1656 |
| Bst2UI | CCWGG | 3 cut(s) | 18, 122, 930 |
| Bst4CI | ACNGT | 1 cut(s) | 1420 |
| Bst6I | CTCTTC | 5 cut(s) | 125, 181, 418, 562, 653 |
| BstAFI | CTTAAG | 1 cut(s) | 59 |
| BstAUI | TGTACA | 1 cut(s) | 1302 |
| BstBI | TTCGAA | 2 cut(s) | 410, 1427 |
| BstC8I | GCNNGC | 7 cut(s) | 74, 86, 326, 528, 577, 944, 1096 |
| BstEII | GGTNACC | 1 cut(s) | 97 |
| BstF5I | GGATG | 4 cut(s) | 1400, 1564, 1570, 1651 |
| BstHHI | GCGC | 1 cut(s) | 1298 |
| BstKTI | GATC | 4 cut(s) | 496, 561, 1040, 1689 |
| BstMAI | GTCTC | 9 cut(s) | 172, 361, 468, 555, 813, 911, 968, 1159, 1203 |
| BstMBI | GATC | 4 cut(s) | 493, 558, 1037, 1686 |
| BstMCI | CGRYCG | 1 cut(s) | 527 |
| BstNI | CCWGG | 3 cut(s) | 18, 122, 930 |
| BstPI | GGTNACC | 1 cut(s) | 97 |
| BstSCI | CCNGG | 9 cut(s) | 16, 111, 120, 277, 278, 318, 319, 779, 928 |
| BstV2I | GAAGAC | 3 cut(s) | 1349, 1400, 1520 |
| BstZI | CGGCCG | 1 cut(s) | 524 |
| BsuRI | GGCC | 5 cut(s) | 57, 142, 324, 526, 1028 |
| BtgZI | GCGATG | 1 cut(s) | 560 |
| BtsCI | GGATG | 4 cut(s) | 1400, 1564, 1570, 1651 |
| BtsI | GCAGTG | 2 cut(s) | 1146, 1239 |
| BtsIMutI | CAGTG | 4 cut(s) | 503, 1001, 1146, 1239 |
| Cac8I | GCNNGC | 7 cut(s) | 74, 86, 326, 528, 577, 944, 1096 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1484 |
| CfoI | GCGC | 1 cut(s) | 1298 |
| Cfr10I | RCCGGY | 5 cut(s) | 68, 286, 324, 522, 526 |
| Cfr13I | GGNCC | 5 cut(s) | 55, 118, 141, 322, 520 |
| Cfr9I | CCCGGG | 2 cut(s) | 278, 319 |
| CseI | GACGC | 1 cut(s) | 638 |
| Csp6I | GTAC | 4 cut(s) | 507, 1303, 1577, 1649 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 765, 800, 1393, 1428 |
| CviAII | CATG | 3 cut(s) | 46, 1261, 1531 |
| CviQI | GTAC | 4 cut(s) | 507, 1303, 1577, 1649 |
| DpnI | GATC | 4 cut(s) | 495, 560, 1039, 1688 |
| DpnII | GATC | 4 cut(s) | 493, 558, 1037, 1686 |
| EaeI | YGGCCR | 1 cut(s) | 524 |
| EagI | CGGCCG | 1 cut(s) | 524 |
| Eam1104I | CTCTTC | 5 cut(s) | 125, 181, 418, 562, 653 |
| EarI | CTCTTC | 5 cut(s) | 125, 181, 418, 562, 653 |
| EciI | GGCGGA | 2 cut(s) | 131, 1160 |
| Ecl136II | GAGCTC | 1 cut(s) | 84 |
| EclXI | CGGCCG | 1 cut(s) | 524 |
| Eco130I | CCWWGG | 2 cut(s) | 1411, 1656 |
| Eco147I | AGGCCT | 1 cut(s) | 1028 |
| Eco24I | GRGCYC | 2 cut(s) | 86, 279 |
| Eco31I | GGTCTC | 2 cut(s) | 172, 1159 |
| Eco47I | GGWCC | 2 cut(s) | 118, 520 |
| Eco52I | CGGCCG | 1 cut(s) | 524 |
| Eco53kI | GAGCTC | 1 cut(s) | 84 |
| Eco57I | CTGAAG | 3 cut(s) | 50, 77, 1158 |
| Eco88I | CYCGRG | 2 cut(s) | 278, 319 |
| Eco91I | GGTNACC | 1 cut(s) | 97 |
| EcoICRI | GAGCTC | 1 cut(s) | 84 |
| EcoO65I | GGTNACC | 1 cut(s) | 97 |
| EcoRI | GAATTC | 4 cut(s) | 21, 406, 1115, 1502 |
| EcoRII | CCWGG | 3 cut(s) | 16, 120, 928 |
| EcoT14I | CCWWGG | 2 cut(s) | 1411, 1656 |
| EcoT38I | GRGCYC | 2 cut(s) | 86, 279 |
| ErhI | CCWWGG | 2 cut(s) | 1411, 1656 |
| Esp3I | CGTCTC | 2 cut(s) | 468, 813 |
| FaeI | CATG | 3 cut(s) | 49, 1264, 1534 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 415, 447, 1282, 1314, 1334, 1366 |
| FaqI | GGGAC | 4 cut(s) | 95, 355, 641, 723 |
| FatI | CATG | 3 cut(s) | 45, 1260, 1530 |
| FbaI | TGATCA | 2 cut(s) | 493, 558 |
| FokI | GGATG | 4 cut(s) | 1387, 1571, 1577, 1638 |
| FriOI | GRGCYC | 2 cut(s) | 86, 279 |
| FspBI | CTAG | 3 cut(s) | 420, 903, 1374 |
| GlaI | GCGC | 1 cut(s) | 1297 |
| GsaI | CCCAGC | 3 cut(s) | 248, 1091, 1488 |
| GsuI | CTGGAG | 2 cut(s) | 293, 843 |
| HaeIII | GGCC | 5 cut(s) | 57, 142, 324, 526, 1028 |
| HgaI | GACGC | 1 cut(s) | 638 |
| HhaI | GCGC | 1 cut(s) | 1298 |
| Hin1II | CATG | 3 cut(s) | 49, 1264, 1534 |
| Hin6I | GCGC | 1 cut(s) | 1296 |
| HinP1I | GCGC | 1 cut(s) | 1296 |
| HincII | GTYRAC | 1 cut(s) | 40 |
| HindII | GTYRAC | 1 cut(s) | 40 |
| HindIII | AAGCTT | 1 cut(s) | 1348 |
| HinfI | GANTC | 6 cut(s) | 173, 343, 643, 670, 727, 1699 |
| HphI | GGTGA | 4 cut(s) | 91, 461, 526, 1346 |
| Hpy166II | GTNNAC | 4 cut(s) | 40, 265, 690, 1252 |
| Hpy188III | TCNNGA | 6 cut(s) | 347, 1045, 1112, 1325, 1354, 1690 |
| Hpy8I | GTNNAC | 4 cut(s) | 40, 265, 690, 1252 |
| Hpy99I | CGWCG | 1 cut(s) | 208 |
| HpyAV | CCTTC | 6 cut(s) | 367, 511, 684, 751, 1284, 1378 |
| HpyCH4III | ACNGT | 1 cut(s) | 1420 |
| HpyCH4IV | ACGT | 3 cut(s) | 192, 806, 1049 |
| HpySE526I | ACGT | 3 cut(s) | 192, 806, 1049 |
| Hsp92II | CATG | 3 cut(s) | 49, 1264, 1534 |
| HspAI | GCGC | 1 cut(s) | 1296 |
| Kpn2I | TCCGGA | 1 cut(s) | 346 |
| KroI | GCCGGC | 2 cut(s) | 324, 526 |
| KroNI | GCCGGC | 2 cut(s) | 326, 528 |
| Ksp22I | TGATCA | 2 cut(s) | 493, 558 |
| Kzo9I | GATC | 4 cut(s) | 493, 558, 1037, 1686 |
| LguI | GCTCTTC | 2 cut(s) | 125, 653 |
| LmnI | GCTCC | 7 cut(s) | 81, 274, 305, 321, 349, 599, 696 |
| LweI | GCATC | 5 cut(s) | 228, 817, 1000, 1072, 1219 |
| MaeI | CTAG | 3 cut(s) | 420, 903, 1374 |
| MaeII | ACGT | 3 cut(s) | 192, 806, 1049 |
| MaeIII | GTNAC | 4 cut(s) | 97, 667, 799, 1420 |
| MalI | GATC | 4 cut(s) | 495, 560, 1039, 1688 |
| MbiI | CCGCTC | 1 cut(s) | 316 |
| MboI | GATC | 4 cut(s) | 493, 558, 1037, 1686 |
| MhlI | GDGCHC | 4 cut(s) | 78, 86, 279, 596 |
| MlyI | GAGTC | 4 cut(s) | 167, 337, 652, 664 |
| MmeI | TCCRAC | 2 cut(s) | 186, 195 |
| MroI | TCCGGA | 1 cut(s) | 346 |
| MroNI | GCCGGC | 2 cut(s) | 324, 526 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1248 |
| MseI | TTAA | 4 cut(s) | 60, 1238, 1442, 1605 |
| MspA1I | CMGCKG | 3 cut(s) | 244, 1178, 1363 |
| MspCI | CTTAAG | 1 cut(s) | 59 |
| MspR9I | CCNGG | 9 cut(s) | 18, 113, 122, 279, 280, 320, 321, 781, 930 |
| Mva1269I | GAATGC | 1 cut(s) | 541 |
| MvaI | CCWGG | 3 cut(s) | 18, 122, 930 |
| NaeI | GCCGGC | 2 cut(s) | 326, 528 |
| NciI | CCSGG | 6 cut(s) | 113, 279, 280, 320, 321, 781 |
| NdeII | GATC | 4 cut(s) | 493, 558, 1037, 1686 |
| NgoMIV | GCCGGC | 2 cut(s) | 324, 526 |
| NlaIII | CATG | 3 cut(s) | 49, 1264, 1534 |
| NlaIV | GGNNCC | 6 cut(s) | 15, 276, 291, 307, 329, 351 |
| NmeAIII | GCCGAG | 1 cut(s) | 747 |
| NmuCI | GTSAC | 3 cut(s) | 97, 667, 799 |
| NspV | TTCGAA | 2 cut(s) | 410, 1427 |
| PceI | AGGCCT | 1 cut(s) | 1028 |
| PciSI | GCTCTTC | 2 cut(s) | 125, 653 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 689 |
| PctI | GAATGC | 1 cut(s) | 541 |
| PdiI | GCCGGC | 2 cut(s) | 326, 528 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1248 |
| PfeI | GAWTC | 2 cut(s) | 727, 1699 |
| PflFI | GACNNNGTC | 2 cut(s) | 107, 805 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1141 |
| PleI | GAGTC | 4 cut(s) | 167, 337, 651, 664 |
| PpsI | GAGTC | 4 cut(s) | 167, 337, 651, 664 |
| PshBI | ATTAAT | 1 cut(s) | 1605 |
| Psp124BI | GAGCTC | 1 cut(s) | 86 |
| Psp6I | CCWGG | 3 cut(s) | 16, 120, 928 |
| PspEI | GGTNACC | 1 cut(s) | 97 |
| PspFI | CCCAGC | 3 cut(s) | 244, 1087, 1484 |
| PspGI | CCWGG | 3 cut(s) | 16, 120, 928 |
| PspN4I | GGNNCC | 6 cut(s) | 15, 276, 291, 307, 329, 351 |
| PspPI | GGNCC | 5 cut(s) | 55, 118, 141, 322, 520 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1484 |
| PsyI | GACNNNGTC | 2 cut(s) | 107, 805 |
| PvuII | CAGCTG | 3 cut(s) | 244, 1178, 1363 |
| RsaI | GTAC | 4 cut(s) | 508, 1304, 1578, 1650 |
| RsaNI | GTAC | 4 cut(s) | 507, 1303, 1577, 1649 |
| SacI | GAGCTC | 1 cut(s) | 86 |
| SapI | GCTCTTC | 2 cut(s) | 125, 653 |
| SaqAI | TTAA | 4 cut(s) | 60, 1238, 1442, 1605 |
| Sau3AI | GATC | 4 cut(s) | 493, 558, 1037, 1686 |
| Sau96I | GGNCC | 5 cut(s) | 55, 118, 141, 322, 520 |
| ScaI | AGTACT | 1 cut(s) | 508 |
| SchI | GAGTC | 4 cut(s) | 167, 337, 652, 664 |
| ScrFI | CCNGG | 9 cut(s) | 18, 113, 122, 279, 280, 320, 321, 781, 930 |
| SduI | GDGCHC | 4 cut(s) | 78, 86, 279, 596 |
| SfaNI | GCATC | 5 cut(s) | 228, 817, 1000, 1072, 1219 |
| SfuI | TTCGAA | 2 cut(s) | 410, 1427 |
| SgrAI | CRCCGGYG | 1 cut(s) | 68 |
| SinI | GGWCC | 2 cut(s) | 118, 520 |
| SmaI | CCCGGG | 2 cut(s) | 280, 321 |
| SmlI | CTYRAG | 2 cut(s) | 59, 1043 |
| SmoI | CTYRAG | 2 cut(s) | 59, 1043 |
| SpeI | ACTAGT | 1 cut(s) | 902 |
| SseBI | AGGCCT | 1 cut(s) | 1028 |
| SsiI | CCGC | 7 cut(s) | 5, 116, 314, 542, 579, 872, 1145 |
| SspMI | CTAG | 3 cut(s) | 420, 903, 1374 |
| SstI | GAGCTC | 1 cut(s) | 86 |
| StuI | AGGCCT | 1 cut(s) | 1028 |
| StyD4I | CCNGG | 9 cut(s) | 16, 111, 120, 277, 278, 318, 319, 779, 928 |
| StyI | CCWWGG | 2 cut(s) | 1411, 1656 |
| TaaI | ACNGT | 1 cut(s) | 1420 |
| TaiI | ACGT | 3 cut(s) | 195, 809, 1052 |
| TaqI | TCGA | 9 cut(s) | 404, 410, 683, 890, 1113, 1268, 1283, 1353, 1427 |
| TatI | WGTACW | 3 cut(s) | 506, 1302, 1648 |
| TauI | GCSGC | 3 cut(s) | 8, 316, 545 |
| TfiI | GAWTC | 2 cut(s) | 727, 1699 |
| Tru1I | TTAA | 4 cut(s) | 60, 1238, 1442, 1605 |
| Tru9I | TTAA | 4 cut(s) | 60, 1238, 1442, 1605 |
| TscAI | CASTG | 4 cut(s) | 503, 1008, 1146, 1239 |
| TseFI | GTSAC | 3 cut(s) | 97, 667, 799 |
| Tsp45I | GTSAC | 3 cut(s) | 97, 667, 799 |
| TspDTI | ATGAA | 4 cut(s) | 62, 935, 1277, 1547 |
| TspGWI | ACGGA | 1 cut(s) | 1571 |
| TspMI | CCCGGG | 2 cut(s) | 278, 319 |
| TspRI | CASTG | 4 cut(s) | 503, 1008, 1146, 1239 |
| Tth111I | GACNNNGTC | 2 cut(s) | 107, 805 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1141 |
| Vha464I | CTTAAG | 1 cut(s) | 59 |
| VpaK11BI | GGWCC | 2 cut(s) | 118, 520 |
| VspI | ATTAAT | 1 cut(s) | 1605 |
| XapI | RAATTY | 5 cut(s) | 21, 406, 481, 1115, 1502 |
| XmaI | CCCGGG | 2 cut(s) | 278, 319 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1248 |
| XspI | CTAG | 3 cut(s) | 420, 903, 1374 |
| ZrmI | AGTACT | 1 cut(s) | 508 |