Rroxscaffold_5G00384400

Plant protein of unknown function (DUF936)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
63790545 .. 63792776
2232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00384400.1

Sequence Viewer

Length: 1773 bp
ATGGCGGCTCTGGCACCTGGAATTCTGCTGAAGCTCGTCAACTCCATGAACACGGGCCTTAAGCCCACCGGCGAGCACCGGAGCTCGCTTCTTCAGGTCACCGACATAGTCCCGGCGGACCTGGACGAGAAGAGCCTCTGGCCCACACAAGGGTTCTACATCAAGGTCTCCGACTCTTCCCACTCCATCTACGTCAGCCTCCCGTCGGAACAAGACGACATCGTTTTGAGCAACAAGATGCAGCTGGGTCAGTTTATATATGTGGACAGACTGGAGCCCGGGTCGCCGGTTCCGGTGGTCAAAGGAGCCAAGCCGCTCCCGGGCCGGCACCCTCTGATGGGGACTCCGGAGCCGTTGATGGGTCTGAGACAGAAGGGAGGAGGAGACAAAACAGAGCAGATGTCGAATTCGAAGCCGACTAGAAGAGGGTCTTGGGATTTGAATGGGGGTGATGTGGTTTCGTCTCCAATGGTGTTGAAGAATTTGGATTTTGATCAGTGTTATAGTACTCCGGTGAAGGACCGGCCGGTGAGGAATGCGGCGATGTCTCCGATGATCAGGGGAAGAATTGGAAGTGGTGGAGTCCGGTGCTCGTTTGGTGGTGGAGTTTTGGGGAAGTTGGGGGACGCAAAGGGAGAGAGTCCATTGCTGAGGAAGAGCTGTGTGACTCCTTCAATGTCGAAGTTTCCGAGGAGCAAAAGCGTGTCTGATAGAGAGCCGAGGATTCCGATTAGTCCCTTCAACCAAGCTGAGAAGAAAAGCTCAACTCCACCACCGCGGTTGCGAAATGCAAGAGTGACAACGTCTCTCAATGTGGCTGGAGATGCACAAACCCCTCAAAAGACCTCCAATTCAAAGCCACAGCAACCGCAACCACAGTCTGCTAATGTGTCGAATGACAGCAACAGCAACAGCACTAGTCTCTGTCTTTCTATGAACTTACCAGGAAAACTCAGCACGCTTGGAAAAGAAGCTGTGCAGCAGCGAGAGACAGCTCAAAAGATTGCCCTCAATGCATTGAGAGATGCTTCGGCTACTGAGGCCTTAGTCCGATCACTCAAGACGTTTTCAAACTTGTGTAAATCAGCTAAAGCAGATGCCCCAGCACCATGCTTTGATCAATTTCTAGAATTCCATCAGCAAGTTGTCCAAGCAGTGGCGGAAATGGTCTCAGTTCAAGCAGCTACTTCAGCTGCTCAAACACCGAATGCCAAGCAGCAGAGAGACAAAGAAGAAGAAGAAGATGCAGTGTTAAACGAAATGGTTCACAACTCCATGAACTCGAAATTGAGCTTATCGAAAAGAAGGTGCGCTTTGTACAAGTCAGTTGCAACCATTCCCGAAAGAGGTGAGCAGAAGACAAGTTTCGAGAAACAGCTGAGAGCCTCTAGTAATCAGAAGGAAAGGAAGACACCATCCACTCCCCTTGGAAAGCTGAATCTTGAAACCATTGGCGAGAATGATGAGAACAAGAGACCACCAGCTGTTTCTTCGAACTCTTGCAGCTTAACCAGTACAATCAAATTGGGGAAGCAGATTGAAACAGAAGCTGGGAACTGGTTTATGGAATTCTTGGAGAAGACTTTGGAGAAAGGCATGAAGAAAACAAAAGGCACAACAACGGATGGGGATGCGCGAAAAGTACCCCAGTCTTTGATACTTAGAGTGATTAACTGGGTGGAAATACAACAATGTGATAGCAGTAAGCGACCAGTACATCCCAAGGCAGCACAAGTAGCCAGAAAGTTGAGGATCAAGATGAAGAATCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

590

Amino Acids

64.26

Weight (kDa)

9.66

Isoelectric Point (pI)

47.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF936 PF06075 4 - 120 1.1e-47 Plant protein of unknown function (DUF936)
DUF6857 PF21647 313 - 563 1.1e-32 Domain of unknown function (DUF6857)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011337)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 13, 327
AccB7I CCANNNNNTGG 1 cut(s) 1156
AccBSI CCGCTC 1 cut(s) 316
AccII CGCG 2 cut(s) 778, 1636
AccIII TCCGGA 1 cut(s) 346
AciI CCGC 8 cut(s) 5, 116, 314, 539, 776, 778, 869, 1160
AclWI GGATC 1 cut(s) 1760
AcoI YGGCCR 1 cut(s) 524
AcsI RAATTY 5 cut(s) 21, 406, 481, 1130, 1568
AcuI CTGAAG 3 cut(s) 50, 77, 1173
AfaI GTAC 5 cut(s) 508, 1319, 1516, 1644, 1716
AfiI CCNNNNNNNGG 9 cut(s) 149, 150, 205, 320, 337, 338, 359, 1156, 1346
AflII CTTAAG 1 cut(s) 59
AgsI TTSAA 9 cut(s) 442, 478, 675, 742, 855, 1071, 1178, 1445, 1541
AhlI ACTAGT 1 cut(s) 917
AjnI CCWGG 3 cut(s) 16, 120, 943
AjuI GAANNNNNNNTTGG 2 cut(s) 415, 447
Alw21I GWGCWC 3 cut(s) 78, 86, 593
AlwI GGATC 1 cut(s) 1760
AlwNI CAGNNNCTG 1 cut(s) 1550
Ama87I CYCGRG 2 cut(s) 278, 319
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 5 cut(s) 55, 140, 322, 524, 1041
ApeKI GCWGC 8 cut(s) 241, 979, 982, 1181, 1193, 1216, 1503, 1727
ApoI RAATTY 5 cut(s) 21, 406, 481, 1130, 1568
Asp700I GAANNNNTTC 1 cut(s) 1263
AspLEI GCGC 2 cut(s) 1313, 1636
AspS9I GGNCC 5 cut(s) 55, 118, 141, 322, 520
AsuC2I CCSGG 5 cut(s) 113, 279, 280, 320, 321
AsuHPI GGTGA 5 cut(s) 91, 461, 526, 541, 1361
AsuII TTCGAA 2 cut(s) 410, 1493
AvaI CYCGRG 2 cut(s) 278, 319
AvaII GGWCC 2 cut(s) 118, 520
BanI GGYRCC 2 cut(s) 13, 327
BanII GRGCYC 2 cut(s) 86, 279
BbsI GAAGAC 3 cut(s) 1364, 1415, 1586
Bbv12I GWGCWC 3 cut(s) 78, 86, 593
BbvCI CCTCAGC 1 cut(s) 650
BbvI GCAGC 8 cut(s) 253, 991, 994, 1180, 1193, 1228, 1515, 1739
BccI CCATC 6 cut(s) 194, 331, 352, 1143, 1423, 1619
BceAI ACGGC 1 cut(s) 337
BciT130I CCWGG 3 cut(s) 18, 122, 945
BclI TGATCA 3 cut(s) 493, 555, 1117
BcnI CCSGG 5 cut(s) 113, 279, 280, 320, 321
BcuI ACTAGT 1 cut(s) 917
BfaI CTAG 4 cut(s) 420, 918, 1127, 1389
BfrI CTTAAG 1 cut(s) 59
BmcAI AGTACT 1 cut(s) 508
Bme1390I CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 945
Bme18I GGWCC 2 cut(s) 118, 520
BmeT110I CYCGRG 2 cut(s) 278, 319
BmgT120I GGNCC 5 cut(s) 55, 118, 141, 322, 520
BmiI GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
BmrFI CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 945
BmrI ACTGGG 2 cut(s) 1642, 1684
BmsI GCATC 6 cut(s) 228, 814, 1015, 1087, 1234, 1621
BmuI ACTGGG 2 cut(s) 1642, 1684
BpiI GAAGAC 3 cut(s) 1364, 1415, 1586
BpmI CTGGAG 2 cut(s) 293, 840
Bpu10I CCTNAGC 1 cut(s) 650
Bpu14I TTCGAA 2 cut(s) 410, 1493
BpuEI CTTGAG 1 cut(s) 1043
BpuMI CCSGG 5 cut(s) 113, 279, 280, 320, 321
BsaBI GATNNNNATC 1 cut(s) 492
BsaI GGTCTC 3 cut(s) 172, 1174, 1468
BsaJI CCNNGG 7 cut(s) 278, 319, 689, 719, 776, 1426, 1722
BsaWI WCCGGW 5 cut(s) 78, 292, 346, 511, 585
BsaXI ACNNNNNCTCC 2 cut(s) 266, 296
Bsc4I CCNNNNNNNGG 9 cut(s) 149, 150, 205, 320, 337, 338, 359, 1156, 1346
Bse118I RCCGGY 5 cut(s) 68, 286, 324, 522, 526
Bse1I ACTGG 6 cut(s) 276, 1512, 1562, 1648, 1679, 1712
Bse3DI GCAATG 1 cut(s) 644
Bse8I GATNNNNATC 1 cut(s) 492
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 3 cut(s) 18, 122, 945
BseDI CCNNGG 7 cut(s) 278, 319, 689, 719, 776, 1426, 1722
BseGI GGATG 4 cut(s) 1415, 1630, 1636, 1717
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 9 cut(s) 149, 150, 205, 320, 337, 338, 359, 1156, 1346
BseMI GCAATG 1 cut(s) 644
BseMII CTCAG 7 cut(s) 356, 641, 741, 967, 1029, 1185, 1370
BseNI ACTGG 6 cut(s) 276, 1512, 1562, 1648, 1679, 1712
BseRI GAGGAG 3 cut(s) 393, 396, 706
BseX3I CGGCCG 1 cut(s) 524
BseXI GCAGC 8 cut(s) 253, 991, 994, 1180, 1193, 1228, 1515, 1739
BseYI CCCAGC 3 cut(s) 244, 1102, 1550
BsgI GTGCAG 1 cut(s) 998
Bsh1236I CGCG 2 cut(s) 778, 1636
Bsh1285I CGRYCG 1 cut(s) 527
BshFI GGCC 5 cut(s) 57, 142, 324, 526, 1043
BshNI GGYRCC 2 cut(s) 13, 327
BsiEI CGRYCG 1 cut(s) 527
BsiHKAI GWGCWC 3 cut(s) 78, 86, 593
BsiHKCI CYCGRG 2 cut(s) 278, 319
BslFI GGGAC 4 cut(s) 95, 355, 638, 720
BslI CCNNNNNNNGG 9 cut(s) 149, 150, 205, 320, 337, 338, 359, 1156, 1346
BsmBI CGTCTC 2 cut(s) 468, 810
BsmFI GGGAC 4 cut(s) 95, 355, 638, 720
BsmI GAATGC 2 cut(s) 541, 1213
BsnI GGCC 5 cut(s) 57, 142, 324, 526, 1043
Bso31I GGTCTC 3 cut(s) 172, 1174, 1468
BsoBI CYCGRG 2 cut(s) 278, 319
Bsp119I TTCGAA 2 cut(s) 410, 1493
Bsp1286I GDGCHC 4 cut(s) 78, 86, 279, 593
Bsp13I TCCGGA 1 cut(s) 346
Bsp1407I TGTACA 1 cut(s) 1317
Bsp143I GATC 5 cut(s) 493, 555, 1052, 1117, 1752
BspACI CCGC 8 cut(s) 5, 116, 314, 539, 776, 778, 869, 1160
BspANI GGCC 5 cut(s) 57, 142, 324, 526, 1043
BspCNI CTCAG 7 cut(s) 357, 642, 742, 966, 1030, 1184, 1371
BspEI TCCGGA 1 cut(s) 346
BspFNI CGCG 2 cut(s) 778, 1636
BspLI GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
BspPI GGATC 1 cut(s) 1760
BspQI GCTCTTC 2 cut(s) 125, 650
BspT104I TTCGAA 2 cut(s) 410, 1493
BspT107I GGYRCC 2 cut(s) 13, 327
BspTI CTTAAG 1 cut(s) 59
BspTNI GGTCTC 3 cut(s) 172, 1174, 1468
BsrBI CCGCTC 1 cut(s) 316
BsrDI GCAATG 1 cut(s) 644
BsrFI RCCGGY 5 cut(s) 68, 286, 324, 522, 526
BsrGI TGTACA 1 cut(s) 1317
BsrI ACTGG 6 cut(s) 276, 1512, 1562, 1648, 1679, 1712
BssAI RCCGGY 5 cut(s) 68, 286, 324, 522, 526
BssECI CCNNGG 7 cut(s) 278, 319, 689, 719, 776, 1426, 1722
BssMI GATC 5 cut(s) 493, 555, 1052, 1117, 1752
BssT1I CCWWGG 2 cut(s) 1426, 1722
Bst2UI CCWGG 3 cut(s) 18, 122, 945
Bst4CI ACNGT 1 cut(s) 879
Bst6I CTCTTC 4 cut(s) 125, 181, 418, 650
BstAFI CTTAAG 1 cut(s) 59
BstAUI TGTACA 1 cut(s) 1317
BstBI TTCGAA 2 cut(s) 410, 1493
BstC8I GCNNGC 4 cut(s) 74, 86, 326, 959
BstDEI CTNAG 9 cut(s) 365, 650, 750, 953, 1038, 1045, 1171, 1379, 1661
BstDSI CCRYGG 1 cut(s) 776
BstEII GGTNACC 1 cut(s) 97
BstF5I GGATG 4 cut(s) 1415, 1630, 1636, 1717
BstFNI CGCG 2 cut(s) 778, 1636
BstHHI GCGC 2 cut(s) 1313, 1636
BstKTI GATC 5 cut(s) 496, 558, 1055, 1120, 1755
BstMBI GATC 5 cut(s) 493, 555, 1052, 1117, 1752
BstMCI CGRYCG 1 cut(s) 527
BstMWI GCNNNNNNNGC 7 cut(s) 11, 283, 824, 1013, 1040, 1190, 1736
BstNI CCWGG 3 cut(s) 18, 122, 945
BstPI GGTNACC 1 cut(s) 97
BstSCI CCNGG 8 cut(s) 16, 111, 120, 277, 278, 318, 319, 943
BstUI CGCG 2 cut(s) 778, 1636
BstV1I GCAGC 8 cut(s) 253, 991, 994, 1180, 1193, 1228, 1515, 1739
BstV2I GAAGAC 3 cut(s) 1364, 1415, 1586
BstZI CGGCCG 1 cut(s) 524
BsuRI GGCC 5 cut(s) 57, 142, 324, 526, 1043
BtgI CCRYGG 1 cut(s) 776
BtgZI GCGATG 1 cut(s) 557
BtsCI GGATG 4 cut(s) 1415, 1630, 1636, 1717
BtsI GCAGTG 2 cut(s) 1161, 1254
BtsIMutI CAGTG 3 cut(s) 503, 1161, 1254
Cac8I GCNNGC 4 cut(s) 74, 86, 326, 959
CaiI CAGNNNCTG 1 cut(s) 1550
CfoI GCGC 2 cut(s) 1313, 1636
Cfr10I RCCGGY 5 cut(s) 68, 286, 324, 522, 526
Cfr13I GGNCC 5 cut(s) 55, 118, 141, 322, 520
Cfr42I CCGCGG 1 cut(s) 779
Cfr9I CCCGGG 2 cut(s) 278, 319
CseI GACGC 1 cut(s) 635
Csp6I GTAC 5 cut(s) 507, 1318, 1515, 1643, 1715
CspCI CAANNNNNGTGG 4 cut(s) 762, 797, 1408, 1443
CviAII CATG 5 cut(s) 46, 1110, 1276, 1597, 1770
CviQI GTAC 5 cut(s) 507, 1318, 1515, 1643, 1715
DdeI CTNAG 9 cut(s) 365, 650, 750, 953, 1038, 1045, 1171, 1379, 1661
DpnI GATC 5 cut(s) 495, 557, 1054, 1119, 1754
DpnII GATC 5 cut(s) 493, 555, 1052, 1117, 1752
EaeI YGGCCR 1 cut(s) 524
EagI CGGCCG 1 cut(s) 524
Eam1104I CTCTTC 4 cut(s) 125, 181, 418, 650
EarI CTCTTC 4 cut(s) 125, 181, 418, 650
EciI GGCGGA 2 cut(s) 131, 1175
Ecl136II GAGCTC 1 cut(s) 84
EclXI CGGCCG 1 cut(s) 524
Eco130I CCWWGG 2 cut(s) 1426, 1722
Eco147I AGGCCT 1 cut(s) 1043
Eco24I GRGCYC 2 cut(s) 86, 279
Eco31I GGTCTC 3 cut(s) 172, 1174, 1468
Eco47I GGWCC 2 cut(s) 118, 520
Eco52I CGGCCG 1 cut(s) 524
Eco53kI GAGCTC 1 cut(s) 84
Eco57I CTGAAG 3 cut(s) 50, 77, 1173
Eco88I CYCGRG 2 cut(s) 278, 319
Eco91I GGTNACC 1 cut(s) 97
EcoICRI GAGCTC 1 cut(s) 84
EcoO65I GGTNACC 1 cut(s) 97
EcoRI GAATTC 4 cut(s) 21, 406, 1130, 1568
EcoRII CCWGG 3 cut(s) 16, 120, 943
EcoT14I CCWWGG 2 cut(s) 1426, 1722
EcoT22I ATGCAT 1 cut(s) 1018
EcoT38I GRGCYC 2 cut(s) 86, 279
ErhI CCWWGG 2 cut(s) 1426, 1722
Esp3I CGTCTC 2 cut(s) 468, 810
FaeI CATG 5 cut(s) 49, 1113, 1279, 1600, 1773
FalI AAGNNNNNCTT 4 cut(s) 415, 447, 1297, 1329
FaqI GGGAC 4 cut(s) 95, 355, 638, 720
FatI CATG 5 cut(s) 45, 1109, 1275, 1596, 1769
FbaI TGATCA 3 cut(s) 493, 555, 1117
FokI GGATG 4 cut(s) 1402, 1637, 1643, 1704
FriOI GRGCYC 2 cut(s) 86, 279
FspBI CTAG 4 cut(s) 420, 918, 1127, 1389
GlaI GCGC 2 cut(s) 1312, 1635
GsaI CCCAGC 3 cut(s) 248, 1106, 1554
GsuI CTGGAG 2 cut(s) 293, 840
HaeIII GGCC 5 cut(s) 57, 142, 324, 526, 1043
HgaI GACGC 1 cut(s) 635
HhaI GCGC 2 cut(s) 1313, 1636
Hin1II CATG 5 cut(s) 49, 1113, 1279, 1600, 1773
Hin6I GCGC 2 cut(s) 1311, 1634
HinP1I GCGC 2 cut(s) 1311, 1634
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HinfI GANTC 8 cut(s) 173, 343, 582, 640, 667, 724, 1438, 1765
HphI GGTGA 5 cut(s) 91, 461, 526, 541, 1361
Hpy166II GTNNAC 3 cut(s) 40, 265, 1267
Hpy188III TCNNGA 7 cut(s) 347, 1060, 1127, 1340, 1369, 1442, 1756
Hpy8I GTNNAC 3 cut(s) 40, 265, 1267
Hpy99I CGWCG 1 cut(s) 208
HpyAV CCTTC 6 cut(s) 367, 511, 681, 748, 1299, 1393
HpyCH4III ACNGT 1 cut(s) 879
HpyCH4IV ACGT 3 cut(s) 192, 803, 1064
HpyCH4V TGCA 8 cut(s) 241, 791, 827, 979, 1016, 1247, 1331, 1503
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 283, 824, 1013, 1040, 1190, 1736
HpyF3I CTNAG 9 cut(s) 365, 650, 750, 953, 1038, 1045, 1171, 1379, 1661
HpySE526I ACGT 3 cut(s) 192, 803, 1064
Hsp92II CATG 5 cut(s) 49, 1113, 1279, 1600, 1773
HspAI GCGC 2 cut(s) 1311, 1634
Kpn2I TCCGGA 1 cut(s) 346
KroI GCCGGC 1 cut(s) 324
KroNI GCCGGC 1 cut(s) 326
Ksp22I TGATCA 3 cut(s) 493, 555, 1117
KspI CCGCGG 1 cut(s) 779
Kzo9I GATC 5 cut(s) 493, 555, 1052, 1117, 1752
LguI GCTCTTC 2 cut(s) 125, 650
LmnI GCTCC 6 cut(s) 81, 274, 305, 321, 349, 693
Lsp1109I GCAGC 8 cut(s) 253, 991, 994, 1180, 1193, 1228, 1515, 1739
LweI GCATC 6 cut(s) 228, 814, 1015, 1087, 1234, 1621
MaeI CTAG 4 cut(s) 420, 918, 1127, 1389
MaeII ACGT 3 cut(s) 192, 803, 1064
MaeIII GTNAC 3 cut(s) 97, 664, 796
MalI GATC 5 cut(s) 495, 557, 1054, 1119, 1754
MbiI CCGCTC 1 cut(s) 316
MboI GATC 5 cut(s) 493, 555, 1052, 1117, 1752
MhlI GDGCHC 4 cut(s) 78, 86, 279, 593
MlyI GAGTC 5 cut(s) 167, 337, 591, 649, 661
MmeI TCCRAC 2 cut(s) 186, 195
Mph1103I ATGCAT 1 cut(s) 1018
MroI TCCGGA 1 cut(s) 346
MroNI GCCGGC 1 cut(s) 324
MroXI GAANNNNTTC 1 cut(s) 1263
MseI TTAA 4 cut(s) 60, 1253, 1508, 1671
MspA1I CMGCKG 5 cut(s) 244, 778, 1193, 1378, 1484
MspCI CTTAAG 1 cut(s) 59
MspR9I CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 945
Mva1269I GAATGC 2 cut(s) 541, 1213
MvaI CCWGG 3 cut(s) 18, 122, 945
MvnI CGCG 2 cut(s) 778, 1636
MwoI GCNNNNNNNGC 7 cut(s) 11, 283, 824, 1013, 1040, 1190, 1736
NaeI GCCGGC 1 cut(s) 326
NciI CCSGG 5 cut(s) 113, 279, 280, 320, 321
NdeII GATC 5 cut(s) 493, 555, 1052, 1117, 1752
NgoMIV GCCGGC 1 cut(s) 324
NlaIII CATG 5 cut(s) 49, 1113, 1279, 1600, 1773
NlaIV GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
NmeAIII GCCGAG 1 cut(s) 744
NmuCI GTSAC 3 cut(s) 97, 664, 796
NsiI ATGCAT 1 cut(s) 1018
NspV TTCGAA 2 cut(s) 410, 1493
PceI AGGCCT 1 cut(s) 1043
PciSI GCTCTTC 2 cut(s) 125, 650
PcsI WCGNNNNNNNCGW 1 cut(s) 686
PctI GAATGC 2 cut(s) 541, 1213
PdiI GCCGGC 1 cut(s) 326
PdmI GAANNNNTTC 1 cut(s) 1263
PfeI GAWTC 3 cut(s) 724, 1438, 1765
PflFI GACNNNGTC 2 cut(s) 107, 802
PflMI CCANNNNNTGG 1 cut(s) 1156
PleI GAGTC 5 cut(s) 167, 337, 590, 648, 661
PpsI GAGTC 5 cut(s) 167, 337, 590, 648, 661
Psp124BI GAGCTC 1 cut(s) 86
Psp6I CCWGG 3 cut(s) 16, 120, 943
PspEI GGTNACC 1 cut(s) 97
PspFI CCCAGC 3 cut(s) 244, 1102, 1550
PspGI CCWGG 3 cut(s) 16, 120, 943
PspN4I GGNNCC 6 cut(s) 15, 276, 291, 307, 329, 351
PspPI GGNCC 5 cut(s) 55, 118, 141, 322, 520
PstNI CAGNNNCTG 1 cut(s) 1550
PsyI GACNNNGTC 2 cut(s) 107, 802
PvuII CAGCTG 4 cut(s) 244, 1193, 1378, 1484
RsaI GTAC 5 cut(s) 508, 1319, 1516, 1644, 1716
RsaNI GTAC 5 cut(s) 507, 1318, 1515, 1643, 1715
SacI GAGCTC 1 cut(s) 86
SacII CCGCGG 1 cut(s) 779
SapI GCTCTTC 2 cut(s) 125, 650
SaqAI TTAA 4 cut(s) 60, 1253, 1508, 1671
Sau3AI GATC 5 cut(s) 493, 555, 1052, 1117, 1752
Sau96I GGNCC 5 cut(s) 55, 118, 141, 322, 520
ScaI AGTACT 1 cut(s) 508
SchI GAGTC 5 cut(s) 167, 337, 591, 649, 661
ScrFI CCNGG 8 cut(s) 18, 113, 122, 279, 280, 320, 321, 945
SduI GDGCHC 4 cut(s) 78, 86, 279, 593
SfaNI GCATC 6 cut(s) 228, 814, 1015, 1087, 1234, 1621
Sfr303I CCGCGG 1 cut(s) 779
SfuI TTCGAA 2 cut(s) 410, 1493
SgrAI CRCCGGYG 1 cut(s) 68
SgrBI CCGCGG 1 cut(s) 779
SinI GGWCC 2 cut(s) 118, 520
SmaI CCCGGG 2 cut(s) 280, 321
SmlI CTYRAG 2 cut(s) 59, 1058
SmoI CTYRAG 2 cut(s) 59, 1058
SpeI ACTAGT 1 cut(s) 917
SseBI AGGCCT 1 cut(s) 1043
SsiI CCGC 8 cut(s) 5, 116, 314, 539, 776, 778, 869, 1160
SspMI CTAG 4 cut(s) 420, 918, 1127, 1389
SstI GAGCTC 1 cut(s) 86
StuI AGGCCT 1 cut(s) 1043
StyD4I CCNGG 8 cut(s) 16, 111, 120, 277, 278, 318, 319, 943
StyI CCWWGG 2 cut(s) 1426, 1722
TaaI ACNGT 1 cut(s) 879
TaiI ACGT 3 cut(s) 195, 806, 1067
TaqI TCGA 8 cut(s) 404, 410, 680, 893, 1283, 1298, 1368, 1493
TatI WGTACW 4 cut(s) 506, 1317, 1514, 1714
TauI GCSGC 3 cut(s) 8, 316, 542
TfiI GAWTC 3 cut(s) 724, 1438, 1765
Tru1I TTAA 4 cut(s) 60, 1253, 1508, 1671
Tru9I TTAA 4 cut(s) 60, 1253, 1508, 1671
TscAI CASTG 3 cut(s) 503, 1161, 1254
TseFI GTSAC 3 cut(s) 97, 664, 796
TseI GCWGC 8 cut(s) 241, 979, 982, 1181, 1193, 1216, 1503, 1727
Tsp45I GTSAC 3 cut(s) 97, 664, 796
TspDTI ATGAA 4 cut(s) 62, 950, 1292, 1613
TspGWI ACGGA 1 cut(s) 1637
TspMI CCCGGG 2 cut(s) 278, 319
TspRI CASTG 3 cut(s) 503, 1161, 1254
Tth111I GACNNNGTC 2 cut(s) 107, 802
Van91I CCANNNNNTGG 1 cut(s) 1156
Vha464I CTTAAG 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 118, 520
XapI RAATTY 5 cut(s) 21, 406, 481, 1130, 1568
XbaI TCTAGA 1 cut(s) 1126
XmaI CCCGGG 2 cut(s) 278, 319
XmnI GAANNNNTTC 1 cut(s) 1263
XspI CTAG 4 cut(s) 420, 918, 1127, 1389
ZrmI AGTACT 1 cut(s) 508
Zsp2I ATGCAT 1 cut(s) 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.