Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003374

Physical Location & Seq

Genomic Coordinates Forward (+)

11712668 .. 11718261

Gene Structure 5594 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1149100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGGCTCGGAAGGGTAACCAACAGAAGAATGCTGTAGATCACCAGACATCAAAGCACAAAAAGAAGGGTCCAGATTCAGGGTGTACACTAGGAGAAACGAAAGGGCATGGGAAAGCAAGTGAGGTGAAAGTTTTCCCTGGAGAAGAACTGCCAAATGGTGACCAGCCAAGCAGTCCTCTTTCAGCCAGTTCGAGTAAAACCAATCATCCTGTGGAGGAGAATAAAAGCAAACAAAAATCTGGAAAGTCTTTGAGGAAAGAGAAGCAAGGTATGGATGCAATGCAGGGTCCAGAGGAGTCAAGTTCTTTACGGAGTGATTTAGGAGATTGCAACGTAAACAATGAAGCTCCAAGCATGAGAGAAGAAAATGGAACATTACCTCCGAGCCACTTACGCCGAAAACATACAAAAAGAAAATCTGGTTCCTCTCTGAATAGATGGCATATGAGAACTTTGATGGCTTGGTTAGAGTTTTCAGATACCCGATTGTTTAGAAACTTGAAGGCATCAGCATTGCCATTCTTGAAGATGGCTAGTGAATGGTTGCAGAGGCACGAGCCAATGTTTCTTACTGTAAAAAGTACGGCACTATATGCCCGTGATTATGTCAAAACAAAGTTTGAGCAGGCATATCCAATTGTTTTGAAGTGGCTTATGCAGTTTGGGGGTATATTGTTTCTTTTATCAATGGCCTGGTTGGATTGTACCGTAAGGGGCATTGATAGCTTAGCTCGGATGGGAACAACATCCTTCTTTTCAGTTATATGGTGCAGCATTCTCTCAGTAGTTGCTATGGCCGGGATGTTCAAGTTTCTGATTGTATTGGTCTTTGCTGCTTTAATTGGACTTTTCGTTGGGTTAATGCTCTCGATTTTGGTGGTTGCTTTTTGTGGAGCTCTTTTGTTGTGGTTCTATGGAAGCTTTTGGACAACAGGATTTGCAATCTTCTTAGGAGGTTTGGCATTCACACTGAGCCATGAGCGTATTGCCCTGTCCATTGCCACTGTGTATTCAGTTTATTGTGCTTGGACATATGTTGGATGGCTGGGTTTGCTTTTGGGGTTGAATTTGTCTTTTATCTCAAGTGATTGTCTGATATATTTCCTAAAGAACAACGTAAATCAGCAGAGAAGACCCAACGGATCCCCTGAACAAACATCTGGAATTCCAGGTCAACCAGACTTCTTTAACAGTGAGCAGGCACATGCTTCATCCTCCGAAAATGTTCCATTGTTTTCTGCCGATCGTAGCCAAGGAGTACCCTCAACCAGTAGCACTGATTCTGAGATAACCTCTGAAGATGAAGTTGTTCGGCTGTTAAACTGTACTGATCACTATTCCGCATTAGGATTTTCTCGATACGAAAATGTAGATGTTTCTTTACTGAAGCGGGAGTACAAGAAAAAGGCAATGTTGGTCCATCCTGATAAAAATATGGGAAATGAAAAAGCTGCTGAAGCTTTCAAGAAACTTCAGAATGCATATGAGATTTTGCTTGATTCCTTGAAGCGAAAAACATATGACGACGAATTAAGGAGAGAGGAACTGCTGAACATTTTCTGTAGATTTCAAAGTACTTCACAAAAGAATGGAGGGCATGGTGTCTTTCCCCCTGGATTTGCACACCCGGAAGCCGATGGTGAAGACCCATTTGGGGATTCAAGGAGAATCTCCTGCAATAAGTGCGGCAATTTTCATGTCTGGGTGCTCACCAGGAAATCAAAATCTCAAGCACGGTGGTGCCAGGATTGCAAAGATTTTCATCAAGCAAAAGATGGTGATGGGTGGGTTGAACAATATTCCCAACCCTTCTTCTTTGGAATGTTGCAGAAGATAGATGCTCCATCCGCATTTGTTTGTGCTGATAGCAAGATATACAATGCTACTGAGTGGTATATTTGCCAGGGTATGAGATGTCCAGCCAACACTCACAAGCCAAGTTTTCATGTTAACACTAGTGTGACCTCTAAGCATAATACTGGAAAGGGAACAAGTTCGGGGCAAACAGGAGGTCGGATGCCAACATCGAACTTGGAAGAAAACATGACAGAGGAAGAATTCTTTGAGTGGTTACAGAATGCAGTGCAAACTGGCACGTTTGAAAATTTTGGTACCGGCACCTCCACTGAGAGCCCATCTGCCAAATCTGCACCTGGTACCAAGAGCGGTGGCAGCACCAGTGGCAGTGCTAACAAGAGAAAGAAAAAGGGAAAGAAATGTTTGACATCATTAATCATAAGTATAGAATCCAATCACCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ Jiv90

Protein Analysis

754

Amino Acids

83.77

Weight (kDa)

8.95

Isoelectric Point (pI)

46.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	444 - 508	1.2e-16	DnaJ domain
Jiv90	PF14901	554 - 651	5.3e-37	Cleavage inducing molecular chaperone

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49580 AT5G49580 AT5G49580
fragaria_vesca	FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670
malus_domestica	MD13G1148800.v1.1 MD13G1148900.v1.1 MD16G1149100.v1.1
prunus_persica	Prupe.1G112900_v2.0.a1 Prupe.1G112900_v2.0.a1 Prupe.1G112900_v2.0.a1 Prupe.1G112900_v2.0.a1
pyrus_communis	pycom13g12810 pycom16g12740 pycom16g12770
rosa_chinensis	RchiOBHm_Chr4g0426071
rosa_laevigata	RLG00000007319
rosa_multiflora	Rmu_co8183128.1_g000001 Rmu_ssc0000281.1_g000006
rosa_roxburghii	Rroxscaffold_5G00368080
rosa_rugosa	Rorug04G0208800 Rorug04G0208900
rosa_samantha	Rh4AG265400 Rh4BG271500 Rh4CG284400 Rh4DG267700
rosa_wichuraiana	Rw4G022940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	2111, 2156
AccB1I	GGYRCC	4 cut(s)	1740, 2111, 2117, 2156
AccBSI	CCGCTC	1 cut(s)	2166
AciI	CCGC	5 cut(s)	1341, 1390, 1686, 1848, 2166
AclWI	GGATC	2 cut(s)	1137, 1150
AcoI	YGGCCR	1 cut(s)	795
AcsI	RAATTY	4 cut(s)	1066, 1164, 2057, 2104
AcuI	CTGAAG	4 cut(s)	1317, 1406, 1457, 1476
AfaI	GTAC	9 cut(s)	85, 583, 706, 1260, 1327, 1397, 1576, 2113, 2158
AfiI	CCNNNNNNNGG	2 cut(s)	77, 1654
AhlI	ACTAGT	1 cut(s)	1955
AjnI	CCWGG	8 cut(s)	136, 692, 1168, 1612, 1712, 1743, 1902, 2152
AjuI	GAANNNNNNNTTGG	2 cut(s)	1635, 1667
AleI	CACNNNNGTG	2 cut(s)	1738, 1958
AloI	GAACNNNNNNTCC	2 cut(s)	364, 396
AluBI	AGCT	7 cut(s)	347, 726, 731, 896, 921, 1451, 1460
AluI	AGCT	7 cut(s)	347, 726, 731, 896, 921, 1451, 1460
Alw21I	GWGCWC	2 cut(s)	898, 1710
AlwI	GGATC	2 cut(s)	1137, 1150
AoxI	GGCC	2 cut(s)	690, 795
ApeKI	GCWGC	4 cut(s)	771, 833, 1451, 2172
ApoI	RAATTY	4 cut(s)	1066, 1164, 2057, 2104
ArsI	GACNNNNNNTTYG	2 cut(s)	1996, 2028
AseI	ATTAAT	1 cut(s)	2231
Asp700I	GAANNNNTTC	5 cut(s)	131, 1224, 1308, 1556, 1993
Asp718I	GGTACC	2 cut(s)	2111, 2156
AspS9I	GGNCC	3 cut(s)	68, 287, 1417
AsuC2I	CCSGG	2 cut(s)	799, 1628
AsuHPI	GGTGA	7 cut(s)	32, 136, 170, 1652, 1702, 1790, 2246
AvaII	GGWCC	3 cut(s)	68, 287, 1417
BamHI	GGATCC	1 cut(s)	1142
BanI	GGYRCC	4 cut(s)	1740, 2111, 2117, 2156
BanII	GRGCYC	2 cut(s)	898, 2135
BarI	GAAGNNNNNNTAC	2 cut(s)	1379, 1411
BauI	CACGAG	1 cut(s)	554
BbsI	GAAGAC	2 cut(s)	1138, 1650
Bbv12I	GWGCWC	2 cut(s)	898, 1710
BbvI	GCAGC	4 cut(s)	783, 820, 1438, 2184
BceAI	ACGGC	1 cut(s)	600
BciT130I	CCWGG	8 cut(s)	138, 694, 1170, 1614, 1714, 1745, 1904, 2154
BclI	TGATCA	1 cut(s)	1330
BcnI	CCSGG	2 cut(s)	799, 1628
BcuI	ACTAGT	1 cut(s)	1955
BfaI	CTAG	3 cut(s)	89, 534, 1956
BfmI	CTRYAG	2 cut(s)	33, 1561
BisI	GCNGC	5 cut(s)	772, 834, 1452, 1687, 2173
BlpI	GCTNAGC	1 cut(s)	727
BlsI	GCNGC	5 cut(s)	773, 835, 1453, 1688, 2174
BmcAI	AGTACT	1 cut(s)	1576
Bme18I	GGWCC	3 cut(s)	68, 287, 1417
BmgT120I	GGNCC	3 cut(s)	68, 287, 1417
BmiI	GGNNCC	8 cut(s)	69, 288, 424, 1144, 1742, 2113, 2119, 2158
BmsI	GCATC	4 cut(s)	265, 515, 1828, 2007
BpiI	GAAGAC	2 cut(s)	1138, 1650
BplI	GAGNNNNNCTC	2 cut(s)	1277, 1309
BpmI	CTGGAG	1 cut(s)	159
Bpu1102I	GCTNAGC	1 cut(s)	727
BpuEI	CTTGAG	2 cut(s)	1066, 1713
BpuMI	CCSGG	2 cut(s)	799, 1628
BsaBI	GATNNNNATC	1 cut(s)	1761
BsaJI	CCNNGG	4 cut(s)	136, 1252, 1612, 1903
BsaXI	ACNNNNNCTCC	2 cut(s)	364, 394
Bsc4I	CCNNNNNNNGG	2 cut(s)	77, 1654
Bse118I	RCCGGY	1 cut(s)	2114
Bse1I	ACTGG	5 cut(s)	186, 1269, 1984, 2095, 2178
Bse3DI	GCAATG	4 cut(s)	285, 512, 996, 1416
Bse8I	GATNNNNATC	1 cut(s)	1761
BseBI	CCWGG	8 cut(s)	138, 694, 1170, 1614, 1714, 1745, 1904, 2154
BseDI	CCNNGG	4 cut(s)	136, 1252, 1612, 1903
BseJI	GATNNNNATC	1 cut(s)	1761
BseLI	CCNNNNNNNGG	2 cut(s)	77, 1654
BseMI	GCAATG	4 cut(s)	285, 512, 996, 1416
BseMII	CTCAG	5 cut(s)	795, 962, 1275, 1878, 2118
BseNI	ACTGG	5 cut(s)	186, 1269, 1984, 2095, 2178
BseRI	GAGGAG	2 cut(s)	230, 308
BseXI	GCAGC	4 cut(s)	783, 820, 1438, 2184
BseYI	CCCAGC	1 cut(s)	1045
BsgI	GTGCAG	2 cut(s)	790, 2133
Bsh1285I	CGRYCG	1 cut(s)	1246
BshFI	GGCC	2 cut(s)	692, 797
BshNI	GGYRCC	4 cut(s)	1740, 2111, 2117, 2156
BsiEI	CGRYCG	1 cut(s)	1246
BsiHKAI	GWGCWC	2 cut(s)	898, 1710
BsiSI	CCGG	3 cut(s)	798, 1628, 2115
BslI	CCNNNNNNNGG	2 cut(s)	77, 1654
BsmI	GAATGC	5 cut(s)	34, 774, 962, 1483, 2083
BsnI	GGCC	2 cut(s)	692, 797
Bsp1286I	GDGCHC	3 cut(s)	898, 1710, 2135
Bsp1407I	TGTACA	1 cut(s)	83
Bsp143I	GATC	4 cut(s)	37, 1142, 1243, 1330
Bsp1720I	GCTNAGC	1 cut(s)	727
BspACI	CCGC	5 cut(s)	1341, 1390, 1686, 1848, 2166
BspANI	GGCC	2 cut(s)	692, 797
BspCNI	CTCAG	5 cut(s)	794, 963, 1276, 1879, 2119
BspLI	GGNNCC	8 cut(s)	69, 288, 424, 1144, 1742, 2113, 2119, 2158
BspPI	GGATC	2 cut(s)	1137, 1150
BspT107I	GGYRCC	4 cut(s)	1740, 2111, 2117, 2156
BsrBI	CCGCTC	1 cut(s)	2166
BsrDI	GCAATG	4 cut(s)	285, 512, 996, 1416
BsrFI	RCCGGY	1 cut(s)	2114
BsrGI	TGTACA	1 cut(s)	83
BsrI	ACTGG	5 cut(s)	186, 1269, 1984, 2095, 2178
BssAI	RCCGGY	1 cut(s)	2114
BssECI	CCNNGG	4 cut(s)	136, 1252, 1612, 1903
BssMI	GATC	4 cut(s)	37, 1142, 1243, 1330
BssSI	CACGAG	1 cut(s)	554
BssT1I	CCWWGG	1 cut(s)	1252
Bst2BI	CACGAG	1 cut(s)	554
Bst2UI	CCWGG	8 cut(s)	138, 694, 1170, 1614, 1714, 1745, 1904, 2154
Bst4CI	ACNGT	6 cut(s)	574, 709, 1006, 1193, 1325, 1737
BstAPI	GCANNNNNTGC	2 cut(s)	593, 1683
BstAUI	TGTACA	1 cut(s)	83
BstC8I	GCNNGC	2 cut(s)	627, 1200
BstDEI	CTNAG	8 cut(s)	727, 781, 949, 971, 1284, 1887, 1968, 2127
BstEII	GGTNACC	2 cut(s)	14, 158
BstKTI	GATC	4 cut(s)	40, 1145, 1246, 1333
BstMBI	GATC	4 cut(s)	37, 1142, 1243, 1330
BstMCI	CGRYCG	1 cut(s)	1246
BstNI	CCWGG	8 cut(s)	138, 694, 1170, 1614, 1714, 1745, 1904, 2154
BstNSI	RCATGY	1 cut(s)	1208
BstPI	GGTNACC	2 cut(s)	14, 158
BstSFI	CTRYAG	2 cut(s)	33, 1561
BstV1I	GCAGC	4 cut(s)	783, 820, 1438, 2184
BstV2I	GAAGAC	2 cut(s)	1138, 1650
BstX2I	RGATCY	1 cut(s)	1142
BstYI	RGATCY	1 cut(s)	1142
BsuRI	GGCC	2 cut(s)	692, 797
BtsI	GCAGTG	2 cut(s)	2088, 2191
BtsIMutI	CAGTG	8 cut(s)	968, 1002, 1198, 1275, 2088, 2124, 2185, 2191
Cac8I	GCNNGC	2 cut(s)	627, 1200
Cfr10I	RCCGGY	1 cut(s)	2114
Cfr13I	GGNCC	3 cut(s)	68, 287, 1417
CsiI	ACCWGGT	1 cut(s)	2152
Csp6I	GTAC	9 cut(s)	84, 582, 705, 1259, 1326, 1396, 1575, 2112, 2157
CspCI	CAANNNNNGTGG	4 cut(s)	1718, 1753, 2149, 2184
CviAII	CATG	8 cut(s)	107, 355, 977, 1205, 1598, 1697, 1946, 2044
CviQI	GTAC	9 cut(s)	84, 582, 705, 1259, 1326, 1396, 1575, 2112, 2157
DdeI	CTNAG	8 cut(s)	727, 781, 949, 971, 1284, 1887, 1968, 2127
DpnI	GATC	4 cut(s)	39, 1144, 1245, 1332
DpnII	GATC	4 cut(s)	37, 1142, 1243, 1330
EaeI	YGGCCR	1 cut(s)	795
Ecl136II	GAGCTC	1 cut(s)	896
Eco130I	CCWWGG	1 cut(s)	1252
Eco24I	GRGCYC	2 cut(s)	898, 2135
Eco47I	GGWCC	3 cut(s)	68, 287, 1417
Eco53kI	GAGCTC	1 cut(s)	896
Eco57I	CTGAAG	4 cut(s)	1317, 1406, 1457, 1476
Eco91I	GGTNACC	2 cut(s)	14, 158
EcoICRI	GAGCTC	1 cut(s)	896
EcoO65I	GGTNACC	2 cut(s)	14, 158
EcoRI	GAATTC	2 cut(s)	1164, 2057
EcoRII	CCWGG	8 cut(s)	136, 692, 1168, 1612, 1712, 1743, 1902, 2152
EcoT14I	CCWWGG	1 cut(s)	1252
EcoT22I	ATGCAT	1 cut(s)	1483
EcoT38I	GRGCYC	2 cut(s)	898, 2135
ErhI	CCWWGG	1 cut(s)	1252
FaeI	CATG	8 cut(s)	110, 358, 980, 1208, 1601, 1700, 1949, 2047
FatI	CATG	8 cut(s)	106, 354, 976, 1204, 1597, 1696, 1945, 2043
FauI	CCCGC	1 cut(s)	1383
FauNDI	CATATG	4 cut(s)	444, 1033, 1483, 1519
FbaI	TGATCA	1 cut(s)	1330
Fnu4HI	GCNGC	5 cut(s)	772, 834, 1452, 1687, 2173
FriOI	GRGCYC	2 cut(s)	898, 2135
Fsp4HI	GCNGC	5 cut(s)	772, 834, 1452, 1687, 2173
FspBI	CTAG	3 cut(s)	89, 534, 1956
GluI	GCNGC	5 cut(s)	772, 834, 1452, 1687, 2173
GsaI	CCCAGC	1 cut(s)	1049
GsuI	CTGGAG	1 cut(s)	159
HaeIII	GGCC	2 cut(s)	692, 797
HapII	CCGG	3 cut(s)	798, 1628, 2115
Hin1II	CATG	8 cut(s)	110, 358, 980, 1208, 1601, 1700, 1949, 2047
HincII	GTYRAC	2 cut(s)	1175, 1951
HindII	GTYRAC	2 cut(s)	1175, 1951
HindIII	AAGCTT	2 cut(s)	919, 1458
HinfI	GANTC	7 cut(s)	74, 296, 1280, 1499, 1658, 1668, 2246
HpaI	GTTAAC	1 cut(s)	1951
HpaII	CCGG	3 cut(s)	798, 1628, 2115
HphI	GGTGA	7 cut(s)	32, 136, 170, 1652, 1702, 1790, 2246
Hpy166II	GTNNAC	5 cut(s)	84, 86, 337, 1175, 1951
Hpy188III	TCNNGA	9 cut(s)	71, 240, 290, 523, 868, 1161, 1356, 1424, 1465
Hpy8I	GTNNAC	5 cut(s)	84, 86, 337, 1175, 1951
Hpy99I	CGWCG	1 cut(s)	1529
HpyAV	CCTTC	5 cut(s)	4, 58, 496, 760, 1819
HpyCH4III	ACNGT	6 cut(s)	574, 709, 1006, 1193, 1325, 1737
HpyCH4IV	ACGT	3 cut(s)	333, 1116, 2096
HpyF3I	CTNAG	8 cut(s)	727, 781, 949, 971, 1284, 1887, 1968, 2127
HpySE526I	ACGT	3 cut(s)	333, 1116, 2096
Hsp92II	CATG	8 cut(s)	110, 358, 980, 1208, 1601, 1700, 1949, 2047
KpnI	GGTACC	2 cut(s)	2115, 2160
Ksp22I	TGATCA	1 cut(s)	1330
KspAI	GTTAAC	1 cut(s)	1951
Kzo9I	GATC	4 cut(s)	37, 1142, 1243, 1330
LmnI	GCTCC	3 cut(s)	352, 893, 1846
Lsp1109I	GCAGC	4 cut(s)	783, 820, 1438, 2184
LweI	GCATC	4 cut(s)	265, 515, 1828, 2007
MabI	ACCWGGT	1 cut(s)	2152
MaeI	CTAG	3 cut(s)	89, 534, 1956
MaeII	ACGT	3 cut(s)	333, 1116, 2096
MaeIII	GTNAC	4 cut(s)	14, 158, 1960, 2070
MalI	GATC	4 cut(s)	39, 1144, 1245, 1332
MbiI	CCGCTC	1 cut(s)	2166
MboI	GATC	4 cut(s)	37, 1142, 1243, 1330
MfeI	CAATTG	1 cut(s)	636
MflI	RGATCY	1 cut(s)	1142
MhlI	GDGCHC	3 cut(s)	898, 1710, 2135
MluCI	AATT	8 cut(s)	636, 840, 1066, 1164, 1529, 1690, 2057, 2104
MlyI	GAGTC	1 cut(s)	305
MmeI	TCCRAC	3 cut(s)	678, 1018, 1994
Mph1103I	ATGCAT	1 cut(s)	1483
MroXI	GAANNNNTTC	5 cut(s)	131, 1224, 1308, 1556, 1993
MseI	TTAA	7 cut(s)	839, 860, 1188, 1319, 1532, 1950, 2231
MslI	CAYNNNNRTG	2 cut(s)	1738, 1958
MspI	CCGG	3 cut(s)	798, 1628, 2115
MunI	CAATTG	1 cut(s)	636
Mva1269I	GAATGC	5 cut(s)	34, 774, 962, 1483, 2083
MvaI	CCWGG	8 cut(s)	138, 694, 1170, 1614, 1714, 1745, 1904, 2154
NciI	CCSGG	2 cut(s)	799, 1628
NdeI	CATATG	4 cut(s)	444, 1033, 1483, 1519
NdeII	GATC	4 cut(s)	37, 1142, 1243, 1330
NlaIII	CATG	8 cut(s)	110, 358, 980, 1208, 1601, 1700, 1949, 2047
NlaIV	GGNNCC	8 cut(s)	69, 288, 424, 1144, 1742, 2113, 2119, 2158
NmuCI	GTSAC	2 cut(s)	158, 1960
NsiI	ATGCAT	1 cut(s)	1483
NspI	RCATGY	1 cut(s)	1208
OliI	CACNNNNGTG	2 cut(s)	1738, 1958
PctI	GAATGC	5 cut(s)	34, 774, 962, 1483, 2083
PdmI	GAANNNNTTC	5 cut(s)	131, 1224, 1308, 1556, 1993
PfeI	GAWTC	6 cut(s)	74, 1280, 1499, 1658, 1668, 2246
PkrI	GCNGC	5 cut(s)	773, 835, 1453, 1688, 2174
Ple19I	CGATCG	1 cut(s)	1246
PleI	GAGTC	1 cut(s)	304
PpsI	GAGTC	1 cut(s)	304
PshBI	ATTAAT	1 cut(s)	2231
Psp124BI	GAGCTC	1 cut(s)	898
Psp6I	CCWGG	8 cut(s)	136, 692, 1168, 1612, 1712, 1743, 1902, 2152
PspEI	GGTNACC	2 cut(s)	14, 158
PspFI	CCCAGC	1 cut(s)	1045
PspGI	CCWGG	8 cut(s)	136, 692, 1168, 1612, 1712, 1743, 1902, 2152
PspN4I	GGNNCC	8 cut(s)	69, 288, 424, 1144, 1742, 2113, 2119, 2158
PspPI	GGNCC	3 cut(s)	68, 287, 1417
PsuI	RGATCY	1 cut(s)	1142
PvuI	CGATCG	1 cut(s)	1246
RsaI	GTAC	9 cut(s)	85, 583, 706, 1260, 1327, 1397, 1576, 2113, 2158
RsaNI	GTAC	9 cut(s)	84, 582, 705, 1259, 1326, 1396, 1575, 2112, 2157
RseI	CAYNNNNRTG	2 cut(s)	1738, 1958
SacI	GAGCTC	1 cut(s)	898
SaqAI	TTAA	7 cut(s)	839, 860, 1188, 1319, 1532, 1950, 2231
SatI	GCNGC	5 cut(s)	772, 834, 1452, 1687, 2173
Sau3AI	GATC	4 cut(s)	37, 1142, 1243, 1330
Sau96I	GGNCC	3 cut(s)	68, 287, 1417
ScaI	AGTACT	1 cut(s)	1576
SchI	GAGTC	1 cut(s)	305
SduI	GDGCHC	3 cut(s)	898, 1710, 2135
SexAI	ACCWGGT	1 cut(s)	2152
SfaNI	GCATC	4 cut(s)	265, 515, 1828, 2007
SfcI	CTRYAG	2 cut(s)	33, 1561
SinI	GGWCC	3 cut(s)	68, 287, 1417
SmiMI	CAYNNNNRTG	2 cut(s)	1738, 1958
SmlI	CTYRAG	2 cut(s)	1081, 1728
SmoI	CTYRAG	2 cut(s)	1081, 1728
SpeI	ACTAGT	1 cut(s)	1955
Sse9I	AATT	8 cut(s)	636, 840, 1066, 1164, 1529, 1690, 2057, 2104
SsiI	CCGC	5 cut(s)	1341, 1390, 1686, 1848, 2166
SspI	AATATT	1 cut(s)	1799
SspMI	CTAG	3 cut(s)	89, 534, 1956
SstI	GAGCTC	1 cut(s)	898
StyI	CCWWGG	1 cut(s)	1252
TaaI	ACNGT	6 cut(s)	574, 709, 1006, 1193, 1325, 1737
TaiI	ACGT	3 cut(s)	336, 1119, 2099
TaqI	TCGA	4 cut(s)	191, 869, 1357, 2027
TasI	AATT	8 cut(s)	636, 840, 1066, 1164, 1529, 1690, 2057, 2104
TatI	WGTACW	4 cut(s)	83, 1325, 1395, 1574
TauI	GCSGC	1 cut(s)	1689
TfiI	GAWTC	6 cut(s)	74, 1280, 1499, 1658, 1668, 2246
Tru1I	TTAA	7 cut(s)	839, 860, 1188, 1319, 1532, 1950, 2231
Tru9I	TTAA	7 cut(s)	839, 860, 1188, 1319, 1532, 1950, 2231
TscAI	CASTG	8 cut(s)	975, 1009, 1198, 1282, 2088, 2131, 2185, 2191
TseFI	GTSAC	2 cut(s)	158, 1960
TseI	GCWGC	4 cut(s)	771, 833, 1451, 2172
Tsp45I	GTSAC	2 cut(s)	158, 1960
TspDTI	ATGAA	7 cut(s)	357, 1200, 1317, 1458, 1685, 1751, 1934
TspGWI	ACGGA	2 cut(s)	325, 1155
TspRI	CASTG	8 cut(s)	975, 1009, 1198, 1282, 2088, 2131, 2185, 2191
VpaK11BI	GGWCC	3 cut(s)	68, 287, 1417
VspI	ATTAAT	1 cut(s)	2231
XapI	RAATTY	4 cut(s)	1066, 1164, 2057, 2104
XceI	RCATGY	1 cut(s)	1208
XcmI	CCANNNNNNNNNTGG	1 cut(s)	208
XmnI	GAANNNNTTC	5 cut(s)	131, 1224, 1308, 1556, 1993
XspI	CTAG	3 cut(s)	89, 534, 1956
ZrmI	AGTACT	1 cut(s)	1576
Zsp2I	ATGCAT	1 cut(s)	1483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.