Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0003374

Physical Location & Seq

Genomic Coordinates Reverse (-)

58109236 .. 58112966

Gene Structure 3731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG265400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGGCTCGGAAGGCTAATCAACAGAAGAATGGGGTTGATCGGCAGACGTCAAAGCAAAAGAAGAAGGCTTCGGAGTCACCAGCAGAAACGAAAGCAAGTGAGGTGAAAGTTTTCCCTGGAGAAGAAATCTCAAATGGTGACCAGCCAAGCAGTCCTCTTTCAGCAGGTGTGGGTAAAACCAATCATGCTGGAGATGAGAATAAAAGCAAGCAAAAACCTGGCAAGGTTTTGAGGAAAGAGAATCAAGGGACGGATCCAATGCCGGGTCAAGGGCAGTCGACGTCTTCAGGAAGTGATTCAGGAAATTGCAATGGAAATAATGAAGCTCCAAGCGTAAGAGAGCATAGTGGGCCGTTACCCCATAGTGAAATACGTCGCAAACATGCAAAAAGAAAATCAGGTTACTCACTGAATCGGCATGTAAAAAATCTGATGGCGAAGATAGAGTCTTCAGATAGCGTATTGGTTAGAAATTTGAGGGCATCAACATTGTCCTTCTTGAAAGTGGCTAATGAATGGCTGCAGAGGCACAAACCAATGATTCTGACTGTAACAAGTAAAGTACAGAATGGTCGTGATTATGTCCAAACAAAGGTTGATCAGGCATATCCTATAGTTAAGAAGTGGCTTACGCAGCTTTGGAGTGTGCTGTTTATTATATCAATGCTTTGGTTCAATTTTACCTTAAGGGGTATCGATTCCTTCGTACGCATGGGGACAACATCCTTGTTTTCAGTGATATGGTTCAGCATTCTCTCAGTAGTTTCTATGGTTGGGATGTTTAAATTCCTGATTGTCTTGGTCTCAGCAGCTTTAATTGGAGTTTTCATTGGGTTCATGCTTGCAATTTTATTGGTTGCTCTTTCTGGAGCTCTTTTCTTGTGGCTTTATGGAAGCTTTTGGACAACAGTACTTGTAATCTTCTTTGGAGGTTTGGCATTCACTCTGAGCCATGAGCGGGTTGCACTGTTAATTGCAACTGTGTATTCCATGTATTGTGCTTGGACGTATGTTGGATGGCTGGGTGTGCTCTTGGGGTTAAATTTATCTTTTATCTCAAGTGAGTGTCTAATATATTTCTTAAAGAACAACGTAAATCAGAATACAAGACCTACCGGATCCCCTGAACAAACGTCTGGAATGCACGATCAACAAGGCTTCTTCAATGGTGAGCATGTGCATTCCTCATCCTCAGAAAATGGCCCATGGTTTTCTGCTGATCGTAGCCCTGGAGTGCCTTCAACCAGTGGGGCTGATTCTGAGTTAACTTCTGAAGATGAAATTGTTCGGCTGCTAAATTGTACTGACCACTATTCAGTGCTGGGATTCTCCCGCTATGAAGACGTAGATATTTCTTTACTGAAGCGAGAGTATAAGAAAAAGGCAATGTTGGTCCATCCTGATAAGAATATGGGAAATGAAAAGGCTGCTGAAGCTTTCAAGAAACTACAGAATGCATATGAGGTTTTACTTGATTCCTTGAAGCGAAAAGCATATGATGACGAATTAAGGAGCCAGGAACTGCTGAACATTTTCCGTAGGTTTAAAAGTGCTTCACAAAAGAATGGAGGAAACGGTTTCTTCCCCTCTGGATTTGGAAGCCCAGAGGCTGATGGTGAGGACCCATTTGGAGAGTCAAGGCAAATCGCCTGCAATAAGTGCAACAACTTTCATACCTGGTCACTCACCAGAAAATCAAAATCTAGAGCAAGATGGTGCCAGGATTGCAAAGATTTTCATCAAGCGAAAGATGGTGATGGATGGGTTGAACAATCTTCACAACCTTTCTTCTTTGGATTATTGCAGAAGGTAGATACTCCATCTGCATTTGTCTGTGCAGATAGCAAGATATATAATGCTAGCGAGTGGTATATTTGTCAGGGAATGAGATGTCCAGCCAACACACACAAACCTAGTTTTCATGTGAACACTAGTGTGACCTCTACGAAGCACAATTCTGGAAAGGGAACAAATTCAGGACAAAGAGGCGGGCGGATGCCAGCATCTGTTGAAGAGTGCATGACAGAGGAAGAATTTGTTGAGTGGCTACAAAATGCAATGCAAACAGGCATGTATGAGAATTTTAGTGCCGGCACCTCCACTGAGAGCCCTTCTGCCAAATCTGGAAATGGTACCAAGACTAGTGGCAGTGCTAACAAGAGAAAGAAAAAGGGAAAGAAGCAATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ Jiv90

Protein Analysis

729

Amino Acids

80.97

Weight (kDa)

9.29

Isoelectric Point (pI)

43.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	436 - 500	1.6e-17	DnaJ domain
Jiv90	PF14901	545 - 643	1.3e-36	Cleavage inducing molecular chaperone

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49580 AT5G49580 AT5G49580
fragaria_vesca	FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670 FvH4_4g20670
malus_domestica	MD13G1148800.v1.1 MD13G1148900.v1.1 MD16G1149100.v1.1
prunus_persica	Prupe.1G112900_v2.0.a1 Prupe.1G112900_v2.0.a1 Prupe.1G112900_v2.0.a1 Prupe.1G112900_v2.0.a1
pyrus_communis	pycom13g12810 pycom16g12740 pycom16g12770
rosa_chinensis	RchiOBHm_Chr4g0426071
rosa_laevigata	RLG00000007319
rosa_multiflora	Rmu_co8183128.1_g000001 Rmu_ssc0000281.1_g000006
rosa_roxburghii	Rroxscaffold_5G00368080
rosa_rugosa	Rorug04G0208800 Rorug04G0208900
rosa_samantha	Rh4AG265400 Rh4BG271500 Rh4CG284400 Rh4DG267700
rosa_wichuraiana	Rw4G022940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	155
AatII	GACGTC	2 cut(s)	50, 284
Acc36I	ACCTGC	1 cut(s)	155
Acc65I	GGTACC	1 cut(s)	2132
AccB1I	GGYRCC	3 cut(s)	1716, 2093, 2132
AccBSI	CCGCTC	1 cut(s)	958
AccI	GTMKAC	1 cut(s)	278
AciI	CCGC	4 cut(s)	958, 1333, 1989, 1993
AclWI	GGATC	4 cut(s)	248, 261, 1113, 1126
AcsI	RAATTY	6 cut(s)	472, 785, 1042, 1972, 2033, 2080
AcuI	CTGAAG	5 cut(s)	270, 435, 1293, 1382, 1452
AcyI	GRCGYC	2 cut(s)	47, 281
AfaI	GTAC	5 cut(s)	564, 708, 912, 1303, 2134
AfiI	CCNNNNNNNGG	4 cut(s)	263, 269, 592, 958
AflII	CTTAAG	1 cut(s)	685
AgsI	TTSAA	8 cut(s)	502, 676, 1165, 1242, 1441, 1483, 1769, 2012
AhlI	ACTAGT	2 cut(s)	1931, 2141
AjnI	CCWGG	6 cut(s)	115, 217, 1228, 1515, 1676, 1719
AleI	CACNNNNGTG	1 cut(s)	1934
AluBI	AGCT	6 cut(s)	326, 637, 812, 872, 897, 1436
AluI	AGCT	6 cut(s)	326, 637, 812, 872, 897, 1436
Alw21I	GWGCWC	2 cut(s)	874, 1032
Alw26I	GTCTC	1 cut(s)	808
AlwI	GGATC	4 cut(s)	248, 261, 1113, 1126
AlwNI	CAGNNNCTG	3 cut(s)	1522, 1610, 2006
AoxI	GGCC	2 cut(s)	350, 1201
ApeKI	GCWGC	5 cut(s)	520, 634, 809, 1291, 1427
ApoI	RAATTY	6 cut(s)	472, 785, 1042, 1972, 2033, 2080
ArsI	GACNNNNNNTTYG	2 cut(s)	431, 463
Asp700I	GAANNNNTTC	5 cut(s)	110, 295, 1284, 1532, 1972
Asp718I	GGTACC	1 cut(s)	2132
AspS9I	GGNCC	4 cut(s)	350, 1202, 1393, 1621
AsuC2I	CCSGG	1 cut(s)	264
AsuHPI	GGTGA	7 cut(s)	69, 115, 149, 1181, 1628, 1678, 1766
AsuNHI	GCTAGC	1 cut(s)	1859
AvaII	GGWCC	2 cut(s)	1393, 1621
BamHI	GGATCC	2 cut(s)	253, 1118
BanI	GGYRCC	3 cut(s)	1716, 2093, 2132
BanII	GRGCYC	2 cut(s)	874, 2111
BbsI	GAAGAC	3 cut(s)	276, 441, 1347
Bbv12I	GWGCWC	2 cut(s)	874, 1032
BbvI	GCAGC	5 cut(s)	507, 646, 821, 1278, 1414
BccI	CCATC	9 cut(s)	427, 1011, 1404, 1607, 1707, 1745, 1751, 1755, 1828
BceAI	ACGGC	1 cut(s)	337
BciT130I	CCWGG	6 cut(s)	117, 219, 1230, 1517, 1678, 1721
BclI	TGATCA	1 cut(s)	598
BcnI	CCSGG	1 cut(s)	264
BcoDI	GTCTC	1 cut(s)	808
BcuI	ACTAGT	2 cut(s)	1931, 2141
BfaI	CTAG	5 cut(s)	1704, 1860, 1914, 1932, 2142
BfmI	CTRYAG	3 cut(s)	521, 612, 1448
BfrI	CTTAAG	1 cut(s)	685
BfuAI	ACCTGC	1 cut(s)	155
BisI	GCNGC	5 cut(s)	521, 635, 810, 1292, 1428
BlsI	GCNGC	5 cut(s)	522, 636, 811, 1293, 1429
BmcAI	AGTACT	1 cut(s)	912
Bme1390I	CCNGG	7 cut(s)	117, 219, 264, 1230, 1517, 1678, 1721
Bme18I	GGWCC	2 cut(s)	1393, 1621
BmgT120I	GGNCC	4 cut(s)	350, 1202, 1393, 1621
BmiI	GGNNCC	7 cut(s)	255, 1120, 1514, 1623, 1718, 2095, 2134
BmrFI	CCNGG	7 cut(s)	117, 219, 264, 1230, 1517, 1678, 1721
BmsI	GCATC	3 cut(s)	491, 1986, 2012
BmtI	GCTAGC	1 cut(s)	1863
BpiI	GAAGAC	3 cut(s)	276, 441, 1347
BpmI	CTGGAG	4 cut(s)	138, 210, 888, 1251
BpuEI	CTTGAG	1 cut(s)	1042
BpuMI	CCSGG	1 cut(s)	264
Bsa29I	ATCGAT	1 cut(s)	696
BsaBI	GATNNNNATC	1 cut(s)	1737
BsaHI	GRCGYC	2 cut(s)	47, 281
BsaI	GGTCTC	1 cut(s)	808
BsaJI	CCNNGG	3 cut(s)	115, 1205, 1228
BsaWI	WCCGGW	1 cut(s)	1115
Bsc4I	CCNNNNNNNGG	4 cut(s)	263, 269, 592, 958
Bse118I	RCCGGY	1 cut(s)	2090
Bse1I	ACTGG	1 cut(s)	1245
Bse3DI	GCAATG	4 cut(s)	316, 1392, 2064, 2189
Bse8I	GATNNNNATC	1 cut(s)	1737
BseBI	CCWGG	6 cut(s)	117, 219, 1230, 1517, 1678, 1721
BseCI	ATCGAT	1 cut(s)	696
BseDI	CCNNGG	3 cut(s)	115, 1205, 1228
BseGI	GGATG	7 cut(s)	722, 783, 1022, 1187, 1396, 1766, 2001
BseJI	GATNNNNATC	1 cut(s)	1737
BseLI	CCNNNNNNNGG	4 cut(s)	263, 269, 592, 958
BseMI	GCAATG	4 cut(s)	316, 1392, 2064, 2189
BseMII	CTCAG	6 cut(s)	771, 819, 938, 1206, 1251, 2094
BseNI	ACTGG	1 cut(s)	1245
BseXI	GCAGC	5 cut(s)	507, 646, 821, 1278, 1414
BseYI	CCCAGC	2 cut(s)	1021, 1321
BsgI	GTGCAG	1 cut(s)	1857
BshFI	GGCC	2 cut(s)	352, 1203
BshNI	GGYRCC	3 cut(s)	1716, 2093, 2132
BshVI	ATCGAT	1 cut(s)	696
BsiHKAI	GWGCWC	2 cut(s)	874, 1032
BsiSI	CCGG	3 cut(s)	263, 1116, 2091
BsiWI	CGTACG	1 cut(s)	706
BslFI	GGGAC	2 cut(s)	262, 730
BslI	CCNNNNNNNGG	4 cut(s)	263, 269, 592, 958
BsmAI	GTCTC	1 cut(s)	808
BsmFI	GGGAC	2 cut(s)	262, 730
BsmI	GAATGC	5 cut(s)	750, 938, 1146, 1180, 1459
BsnI	GGCC	2 cut(s)	352, 1203
Bso31I	GGTCTC	1 cut(s)	808
Bsp1286I	GDGCHC	3 cut(s)	874, 1032, 2111
Bsp143I	GATC	6 cut(s)	37, 253, 598, 1118, 1147, 1219
Bsp19I	CCATGG	1 cut(s)	1205
BspACI	CCGC	4 cut(s)	958, 1333, 1989, 1993
BspANI	GGCC	2 cut(s)	352, 1203
BspCNI	CTCAG	6 cut(s)	770, 818, 939, 1205, 1252, 2095
BspDI	ATCGAT	1 cut(s)	696
BspLI	GGNNCC	7 cut(s)	255, 1120, 1514, 1623, 1718, 2095, 2134
BspMAI	CTGCAG	1 cut(s)	525
BspMI	ACCTGC	1 cut(s)	155
BspOI	GCTAGC	1 cut(s)	1863
BspPI	GGATC	4 cut(s)	248, 261, 1113, 1126
BspT107I	GGYRCC	3 cut(s)	1716, 2093, 2132
BspTI	CTTAAG	1 cut(s)	685
BspTNI	GGTCTC	1 cut(s)	808
BsrBI	CCGCTC	1 cut(s)	958
BsrDI	GCAATG	4 cut(s)	316, 1392, 2064, 2189
BsrFI	RCCGGY	1 cut(s)	2090
BsrI	ACTGG	1 cut(s)	1245
BssAI	RCCGGY	1 cut(s)	2090
BssECI	CCNNGG	3 cut(s)	115, 1205, 1228
BssMI	GATC	6 cut(s)	37, 253, 598, 1118, 1147, 1219
BssNI	GRCGYC	2 cut(s)	47, 281
BssT1I	CCWWGG	1 cut(s)	1205
Bst2UI	CCWGG	6 cut(s)	117, 219, 1230, 1517, 1678, 1721
Bst4CI	ACNGT	5 cut(s)	550, 910, 969, 982, 1577
Bst6I	CTCTTC	1 cut(s)	2007
BstACI	GRCGYC	2 cut(s)	47, 281
BstAFI	CTTAAG	1 cut(s)	685
BstAPI	GCANNNNNTGC	1 cut(s)	1659
BstC8I	GCNNGC	7 cut(s)	209, 843, 1651, 1861, 1991, 2001, 2092
BstDEI	CTNAG	6 cut(s)	757, 805, 947, 1192, 1260, 2103
BstDSI	CCRYGG	1 cut(s)	1205
BstEII	GGTNACC	1 cut(s)	137
BstF5I	GGATG	7 cut(s)	722, 783, 1022, 1187, 1396, 1766, 2001
BstKTI	GATC	6 cut(s)	40, 256, 601, 1121, 1150, 1222
BstMAI	GTCTC	1 cut(s)	808
BstMBI	GATC	6 cut(s)	37, 253, 598, 1118, 1147, 1219
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 349, 526, 634, 1027, 1433, 1659, 1725
BstNI	CCWGG	6 cut(s)	117, 219, 1230, 1517, 1678, 1721
BstNSI	RCATGY	4 cut(s)	386, 422, 1178, 2074
BstPI	GGTNACC	1 cut(s)	137
BstSCI	CCNGG	7 cut(s)	115, 217, 262, 1228, 1515, 1676, 1719
BstSFI	CTRYAG	3 cut(s)	521, 612, 1448
BstV1I	GCAGC	5 cut(s)	507, 646, 821, 1278, 1414
BstV2I	GAAGAC	3 cut(s)	276, 441, 1347
BstX2I	RGATCY	2 cut(s)	253, 1118
BstYI	RGATCY	2 cut(s)	253, 1118
Bsu15I	ATCGAT	1 cut(s)	696
BsuRI	GGCC	2 cut(s)	352, 1203
BsuTUI	ATCGAT	1 cut(s)	696
BtgI	CCRYGG	1 cut(s)	1205
BtsCI	GGATG	7 cut(s)	722, 783, 1022, 1187, 1396, 1766, 2001
BtsI	GCAGTG	1 cut(s)	2155
BtsIMutI	CAGTG	7 cut(s)	407, 741, 965, 1252, 1323, 2100, 2155
BveI	ACCTGC	1 cut(s)	155
Cac8I	GCNNGC	7 cut(s)	209, 843, 1651, 1861, 1991, 2001, 2092
CaiI	CAGNNNCTG	3 cut(s)	1522, 1610, 2006
Cfr10I	RCCGGY	1 cut(s)	2090
Cfr13I	GGNCC	4 cut(s)	350, 1202, 1393, 1621
ClaI	ATCGAT	1 cut(s)	696
CsiI	ACCWGGT	1 cut(s)	1676
Csp6I	GTAC	5 cut(s)	563, 707, 911, 1302, 2133
CspCI	CAANNNNNGTGG	2 cut(s)	2125, 2160
CviQI	GTAC	5 cut(s)	563, 707, 911, 1302, 2133
DdeI	CTNAG	6 cut(s)	757, 805, 947, 1192, 1260, 2103
DpnI	GATC	6 cut(s)	39, 255, 600, 1120, 1149, 1221
DpnII	GATC	6 cut(s)	37, 253, 598, 1118, 1147, 1219
DraI	TTTAAA	2 cut(s)	784, 1546
Eam1104I	CTCTTC	1 cut(s)	2007
EarI	CTCTTC	1 cut(s)	2007
EciI	GGCGGA	1 cut(s)	2008
Ecl136II	GAGCTC	1 cut(s)	872
Eco130I	CCWWGG	1 cut(s)	1205
Eco24I	GRGCYC	2 cut(s)	874, 2111
Eco31I	GGTCTC	1 cut(s)	808
Eco47I	GGWCC	2 cut(s)	1393, 1621
Eco53kI	GAGCTC	1 cut(s)	872
Eco57I	CTGAAG	5 cut(s)	270, 435, 1293, 1382, 1452
Eco91I	GGTNACC	1 cut(s)	137
EcoICRI	GAGCTC	1 cut(s)	872
EcoO109I	RGGNCCY	1 cut(s)	1621
EcoO65I	GGTNACC	1 cut(s)	137
EcoRII	CCWGG	6 cut(s)	115, 217, 1228, 1515, 1676, 1719
EcoT14I	CCWWGG	1 cut(s)	1205
EcoT22I	ATGCAT	1 cut(s)	1459
EcoT38I	GRGCYC	2 cut(s)	874, 2111
ErhI	CCWWGG	1 cut(s)	1205
FaqI	GGGAC	2 cut(s)	262, 730
FauI	CCCGC	3 cut(s)	951, 1340, 1982
FauNDI	CATATG	2 cut(s)	1459, 1495
FbaI	TGATCA	1 cut(s)	598
FblI	GTMKAC	1 cut(s)	278
Fnu4HI	GCNGC	5 cut(s)	521, 635, 810, 1292, 1428
FokI	GGATG	7 cut(s)	709, 790, 1029, 1174, 1383, 1773, 2008
FriOI	GRGCYC	2 cut(s)	874, 2111
Fsp4HI	GCNGC	5 cut(s)	521, 635, 810, 1292, 1428
FspBI	CTAG	5 cut(s)	1704, 1860, 1914, 1932, 2142
GluI	GCNGC	5 cut(s)	521, 635, 810, 1292, 1428
GsaI	CCCAGC	2 cut(s)	1025, 1325
GsuI	CTGGAG	4 cut(s)	138, 210, 888, 1251
HaeIII	GGCC	2 cut(s)	352, 1203
HapII	CCGG	3 cut(s)	263, 1116, 2091
Hin1I	GRCGYC	2 cut(s)	47, 281
HincII	GTYRAC	2 cut(s)	279, 1266
HindII	GTYRAC	2 cut(s)	279, 1266
HindIII	AAGCTT	2 cut(s)	895, 1434
HpaI	GTTAAC	1 cut(s)	1266
HpaII	CCGG	3 cut(s)	263, 1116, 2091
HphI	GGTGA	7 cut(s)	69, 115, 149, 1181, 1628, 1678, 1766
Hpy166II	GTNNAC	3 cut(s)	279, 1266, 1927
Hpy8I	GTNNAC	3 cut(s)	279, 1266, 1927
Hpy99I	CGWCG	2 cut(s)	283, 378
HpyAV	CCTTC	7 cut(s)	4, 58, 505, 712, 1248, 1801, 2121
HpyCH4III	ACNGT	5 cut(s)	550, 910, 969, 982, 1577
HpyCH4IV	ACGT	7 cut(s)	47, 281, 373, 1007, 1092, 1133, 1344
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 349, 526, 634, 1027, 1433, 1659, 1725
HpyF3I	CTNAG	6 cut(s)	757, 805, 947, 1192, 1260, 2103
HpySE526I	ACGT	7 cut(s)	47, 281, 373, 1007, 1092, 1133, 1344
Hsp92I	GRCGYC	2 cut(s)	47, 281
KpnI	GGTACC	1 cut(s)	2136
KroI	GCCGGC	1 cut(s)	2090
KroNI	GCCGGC	1 cut(s)	2092
Ksp22I	TGATCA	1 cut(s)	598
KspAI	GTTAAC	1 cut(s)	1266
Kzo9I	GATC	6 cut(s)	37, 253, 598, 1118, 1147, 1219
LmnI	GCTCC	3 cut(s)	331, 869, 1512
Lsp1109I	GCAGC	5 cut(s)	507, 646, 821, 1278, 1414
LweI	GCATC	3 cut(s)	491, 1986, 2012
MabI	ACCWGGT	1 cut(s)	1676
MaeI	CTAG	5 cut(s)	1704, 1860, 1914, 1932, 2142
MaeII	ACGT	7 cut(s)	47, 281, 373, 1007, 1092, 1133, 1344
MaeIII	GTNAC	7 cut(s)	75, 137, 354, 401, 550, 1680, 1936
MalI	GATC	6 cut(s)	39, 255, 600, 1120, 1149, 1221
MbiI	CCGCTC	1 cut(s)	958
MboI	GATC	6 cut(s)	37, 253, 598, 1118, 1147, 1219
MflI	RGATCY	2 cut(s)	253, 1118
MhlI	GDGCHC	3 cut(s)	874, 1032, 2111
MlyI	GAGTC	3 cut(s)	83, 455, 1643
MmeI	TCCRAC	1 cut(s)	994
Mph1103I	ATGCAT	1 cut(s)	1459
MroNI	GCCGGC	1 cut(s)	2090
MroXI	GAANNNNTTC	5 cut(s)	110, 295, 1284, 1532, 1972
MslI	CAYNNNNRTG	1 cut(s)	1934
MspCI	CTTAAG	1 cut(s)	685
MspI	CCGG	3 cut(s)	263, 1116, 2091
MspR9I	CCNGG	7 cut(s)	117, 219, 264, 1230, 1517, 1678, 1721
Mva1269I	GAATGC	5 cut(s)	750, 938, 1146, 1180, 1459
MvaI	CCWGG	6 cut(s)	117, 219, 1230, 1517, 1678, 1721
MwoI	GCNNNNNNNGC	8 cut(s)	11, 349, 526, 634, 1027, 1433, 1659, 1725
NaeI	GCCGGC	1 cut(s)	2092
NciI	CCSGG	1 cut(s)	264
NcoI	CCATGG	1 cut(s)	1205
NdeI	CATATG	2 cut(s)	1459, 1495
NdeII	GATC	6 cut(s)	37, 253, 598, 1118, 1147, 1219
NgoMIV	GCCGGC	1 cut(s)	2090
NheI	GCTAGC	1 cut(s)	1859
NlaIV	GGNNCC	7 cut(s)	255, 1120, 1514, 1623, 1718, 2095, 2134
NmuCI	GTSAC	4 cut(s)	75, 137, 1680, 1936
NsiI	ATGCAT	1 cut(s)	1459
NspI	RCATGY	4 cut(s)	386, 422, 1178, 2074
OliI	CACNNNNGTG	1 cut(s)	1934
PaqCI	CACCTGC	1 cut(s)	155
PcsI	WCGNNNNNNNCGW	1 cut(s)	702
PctI	GAATGC	5 cut(s)	750, 938, 1146, 1180, 1459
PdiI	GCCGGC	1 cut(s)	2092
PdmI	GAANNNNTTC	5 cut(s)	110, 295, 1284, 1532, 1972
PfeI	GAWTC	8 cut(s)	241, 296, 412, 541, 698, 1256, 1326, 1475
Pfl23II	CGTACG	1 cut(s)	706
PkrI	GCNGC	5 cut(s)	522, 636, 811, 1293, 1429
PleI	GAGTC	3 cut(s)	82, 454, 1642
PpsI	GAGTC	3 cut(s)	82, 454, 1642
PpuMI	RGGWCCY	1 cut(s)	1621
Psp124BI	GAGCTC	1 cut(s)	874
Psp5II	RGGWCCY	1 cut(s)	1621
Psp6I	CCWGG	6 cut(s)	115, 217, 1228, 1515, 1676, 1719
PspEI	GGTNACC	1 cut(s)	137
PspFI	CCCAGC	2 cut(s)	1021, 1321
PspGI	CCWGG	6 cut(s)	115, 217, 1228, 1515, 1676, 1719
PspLI	CGTACG	1 cut(s)	706
PspN4I	GGNNCC	7 cut(s)	255, 1120, 1514, 1623, 1718, 2095, 2134
PspPI	GGNCC	4 cut(s)	350, 1202, 1393, 1621
PspPPI	RGGWCCY	1 cut(s)	1621
PstI	CTGCAG	1 cut(s)	525
PstNI	CAGNNNCTG	3 cut(s)	1522, 1610, 2006
PsuI	RGATCY	2 cut(s)	253, 1118
RsaI	GTAC	5 cut(s)	564, 708, 912, 1303, 2134
RsaNI	GTAC	5 cut(s)	563, 707, 911, 1302, 2133
RseI	CAYNNNNRTG	1 cut(s)	1934
SacI	GAGCTC	1 cut(s)	874
SalI	GTCGAC	1 cut(s)	277
SatI	GCNGC	5 cut(s)	521, 635, 810, 1292, 1428
Sau3AI	GATC	6 cut(s)	37, 253, 598, 1118, 1147, 1219
Sau96I	GGNCC	4 cut(s)	350, 1202, 1393, 1621
ScaI	AGTACT	1 cut(s)	912
SchI	GAGTC	3 cut(s)	83, 455, 1643
ScrFI	CCNGG	7 cut(s)	117, 219, 264, 1230, 1517, 1678, 1721
SduI	GDGCHC	3 cut(s)	874, 1032, 2111
SexAI	ACCWGGT	1 cut(s)	1676
SfaNI	GCATC	3 cut(s)	491, 1986, 2012
SfcI	CTRYAG	3 cut(s)	521, 612, 1448
SinI	GGWCC	2 cut(s)	1393, 1621
SmiMI	CAYNNNNRTG	1 cut(s)	1934
SmlI	CTYRAG	2 cut(s)	685, 1057
SmoI	CTYRAG	2 cut(s)	685, 1057
SpeI	ACTAGT	2 cut(s)	1931, 2141
SsiI	CCGC	4 cut(s)	958, 1333, 1989, 1993
SspMI	CTAG	5 cut(s)	1704, 1860, 1914, 1932, 2142
SstI	GAGCTC	1 cut(s)	874
StyD4I	CCNGG	7 cut(s)	115, 217, 262, 1228, 1515, 1676, 1719
StyI	CCWWGG	1 cut(s)	1205
TaaI	ACNGT	5 cut(s)	550, 910, 969, 982, 1577
TaiI	ACGT	7 cut(s)	50, 284, 376, 1010, 1095, 1136, 1347
TaqI	TCGA	2 cut(s)	278, 696
TatI	WGTACW	3 cut(s)	562, 910, 1301
TfiI	GAWTC	8 cut(s)	241, 296, 412, 541, 698, 1256, 1326, 1475
TscAI	CASTG	7 cut(s)	414, 741, 972, 1252, 1323, 2107, 2155
TseFI	GTSAC	4 cut(s)	75, 137, 1680, 1936
TseI	GCWGC	5 cut(s)	520, 634, 809, 1291, 1427
Tsp45I	GTSAC	4 cut(s)	75, 137, 1680, 1936
TspGWI	ACGGA	2 cut(s)	266, 1526
TspRI	CASTG	7 cut(s)	414, 741, 972, 1252, 1323, 2107, 2155
Vha464I	CTTAAG	1 cut(s)	685
VpaK11BI	GGWCC	2 cut(s)	1393, 1621
XapI	RAATTY	6 cut(s)	472, 785, 1042, 1972, 2033, 2080
XbaI	TCTAGA	1 cut(s)	1703
XceI	RCATGY	4 cut(s)	386, 422, 1178, 2074
XmiI	GTMKAC	1 cut(s)	278
XmnI	GAANNNNTTC	5 cut(s)	110, 295, 1284, 1532, 1972
XspI	CTAG	5 cut(s)	1704, 1860, 1914, 1932, 2142
ZraI	GACGTC	2 cut(s)	48, 282
ZrmI	AGTACT	1 cut(s)	912
Zsp2I	ATGCAT	1 cut(s)	1459

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.