Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0004185

Physical Location & Seq

Genomic Coordinates Reverse (-)

3459222 .. 3464736

Gene Structure 5515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1047600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGACGGACGGCCACCTCTTCAACAACATCTCCCTCGGAGGCCGCGGCGGCACGAATCCAGGGCAGCTTAAAATATTTTCAGGAGGAATTTTATGGAAAAAACAGGGAGGTGGTAAAGCAGTCGAGGTTGATAAAGCTGACATTGTTGGGGTAACATGGATGAAGGTCCCAAAGACTAACCAACTTGGTGTTCAGATTAAAGACGGGTTATACTACAAGTTCATTGGATTTCGTGACCAGGACGTCACTAGTTTGACCAATTATTTTCAAAATACATGTGGGTTAACACCGGCGGAGAAGCAACTTTCTGTAAGCGGACGTAATTGGGGAGAAGTGGATTTAAGTGGGAATATGCTGACTTTCTTGGTTGACTCCAAGCAAGCATTTGAGGTATCTTTGGCTGATGTCTCACAAACACAACTTCAGGGAAAAAATGATGTCATCTTAGAGTTCCATGTGGATGATACCACAGGAGCTAATGAGAAAGATTCATTGATGGAAATAAGCTTTCATATACCTAACTCCAACACTCAATTTGTTGGTGACGAGAGTCATCCTCCTGCTCAGGTTTTCCGTGACAAAATCTCGTCGATGGCAGATGTTGGTTCTGGAGGTGAAGATGCTGTTACCACATTTGATAGCATTGCAATCCTTACACCAAGGGGTCGCTACAGCGTGGAACTTCATCTTTCATTCTTGCGGCTACAAGGACAGGCTAATGATTTCAAAATTCAGTACAGCAGTGTTGTTCGGCTGTTTCTACTTCCGAAGTCTAACCAGCCTCATACCTATGTTGTTGTTACTCTTGATCCTCCTATCCGTAAAGGGCAAACATTGTACCCACATATTGTTTTGCAGTTTGAAACTGACCTCGTGTATCAAACCGACCTGGCAATGAGTGAAGAACTTTTGAACACGAAGTACAAGGACAAGTTAGAACTATCTTATAAGGGACTAATGCATGAAGTGTTCACCACAATACTGCGTGGCTTGTCTGGTGCCAAAGTTACGAAACCGGGAAAATTCCGCAGCTGTCAAGATGGTTATGCTGTCAAATCTTCATTGAAAGCTGAAGATGGTGTTCTATATCCTCTGGAGAAGAGCTTCTTTTTTCTACCAAAACCTCCCACCCTTATTCTTCATGATCAGATTGACTATGTGGAATTTGAGAGGCATGGCGCTGGAGGCTCAAATATGCACTATTTTGACCTTCTCATCCGACTCAAAAGTGAGCAAGAACACCTGTTCCGAAACATTCAGAGGAATGAATATCATAATCTTTTTGACTTCATCAGTTCAAAGGGTCTCAAAATCATGAACTTAGGAGAAGGCCAAGCAGCAAATGGTGGTGTGGCTCCTCTTCTTGATGACGCAGATGATGATGCTGTTGACCCGCATCTTGTCCGTGTGAAGAATGAAGCTGGTGATGATGAGAGTGACGAAGAGGATGAAGATTTTGTTATTGACAAGGATGATGGAGGTTCTCCTACTGATGACTCCGGGGAGGATGATTCTGATGCTAGTGAAAGCGGAGGTGAAAAAGAGAAGCCTGCGAAAAAGGAGTCTCGTAAGGAACCTTCAACTTCCAAGGTACCATCTTCCAAGAAACAAAAAACCAAAGATGCAGGTGAAGATGGTTCAAAGAAGAAAAAACAGAAGAAGAAAAAGGATCCAAATGCACCGAAAAGAGCGATGTCTGGTTTCATGTTCTTCTCAAATACGGAGAGAGAGAATGTAAGGAGAGAGAACCCTGGAATTGCGTTTACCGCTGTGGGGAGAGCACTTGGAGAGAAGTGGAAAAAGATGTCGGCTGATGAAAAGGAGCCATATGAAGCAAAGGCTCGTCAAGATAAAGAACGCTACAAGGATGAAATTAACGGCTACAAGAACCCCCAACCCATGAACATAGATTCGGGGAACGAATCTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000741 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005719 GO:0006355 GO:0006996 GO:0006997 GO:0007275 GO:0008023 GO:0008150 GO:0009553 GO:0009559 GO:0009561 GO:0009791 GO:0009889 GO:0009987 GO:0010197 GO:0010228 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0035101 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0048229 GO:0048284 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071840 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HMG_box POB3_N Rtt106 SSrecog

Protein Analysis

644

Amino Acids

71.58

Weight (kDa)

5.46

Isoelectric Point (pI)

35.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POB3_N	PF17292	7 - 96	6.9e-23	POB3-like N-terminal PH domain
SSrecog	PF03531	106 - 174	7.8e-26	Structure-specific recognition protein (SSRP1)
PH1_SSRP1-like	PF21103	207 - 336	5.3e-50	SSRP1 PH domain
Rttp106-like_middle	PF08512	349 - 440	1.7e-22	Histone chaperone Rttp106-like, middle domain
HMG_box_2	PF09011	558 - 627	1.2e-16	HMG-box domain
HMG_box	PF00505	561 - 629	5.3e-22	HMG (high mobility group) box

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28730
fragaria_vesca	FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210
malus_domestica	MD09G1047500.v1.1 MD17G1047600.v1.1
prunus_persica	Prupe.3G271500_v2.0.a1 Prupe.3G271500_v2.0.a1
pyrus_communis	pycom111g03840 pycom17g04240
rosa_chinensis	RchiOBHm_Chr2g0169081
rosa_laevigata	RLG00000021832
rosa_multiflora	Rmu_sc0004901.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082480
rosa_rugosa	Rorug02G0536700
rosa_samantha	Rh2AG608600 Rh2BG621500 Rh2CG590200 Rh2DG632100
rosa_wichuraiana	Rw2G050460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	948
AarI	CACCTGC	1 cut(s)	1616
AasI	GACNNNNNNGTC	1 cut(s)	242
AatII	GACGTC	1 cut(s)	246
Acc36I	ACCTGC	1 cut(s)	1616
Acc65I	GGTACC	1 cut(s)	1591
AccB1I	GGYRCC	2 cut(s)	998, 1591
AccII	CGCG	1 cut(s)	45
AclWI	GGATC	3 cut(s)	803, 1664, 1677
AcoI	YGGCCR	1 cut(s)	10
AcsI	RAATTY	4 cut(s)	87, 729, 1022, 1163
AcuI	CTGAAG	2 cut(s)	407, 1092
AcyI	GRCGYC	1 cut(s)	243
AfaI	GTAC	4 cut(s)	737, 839, 923, 1593
AfiI	CCNNNNNNNGG	1 cut(s)	1773
AflIII	ACRYGT	1 cut(s)	275
AgsI	TTSAA	9 cut(s)	22, 269, 727, 863, 913, 1066, 1299, 1581, 1641
AhlI	ACTAGT	1 cut(s)	248
AjnI	CCWGG	4 cut(s)	58, 237, 888, 1750
AjuI	GAANNNNNNNTTGG	2 cut(s)	174, 206
AloI	GAACNNNNNNTCC	2 cut(s)	1230, 1262
AluBI	AGCT	8 cut(s)	67, 137, 476, 507, 1032, 1070, 1104, 1421
AluI	AGCT	8 cut(s)	67, 137, 476, 507, 1032, 1070, 1104, 1421
Alw21I	GWGCWC	1 cut(s)	1783
Alw26I	GTCTC	3 cut(s)	412, 1310, 1569
AlwI	GGATC	3 cut(s)	803, 1664, 1677
AoxI	GGCC	3 cut(s)	10, 40, 1330
ApeKI	GCWGC	3 cut(s)	64, 1029, 1337
ApoI	RAATTY	4 cut(s)	87, 729, 1022, 1163
ArsI	GACNNNNNNTTYG	2 cut(s)	1547, 1579
Asp700I	GAANNNNTTC	1 cut(s)	1103
Asp718I	GGTACC	1 cut(s)	1591
AspLEI	GCGC	1 cut(s)	1181
AspS9I	GGNCC	1 cut(s)	166
AsuC2I	CCSGG	2 cut(s)	1017, 1501
AsuHPI	GGTGA	6 cut(s)	554, 626, 964, 1436, 1547, 1640
AvaII	GGWCC	1 cut(s)	166
BamHI	GGATCC	1 cut(s)	1669
BanI	GGYRCC	2 cut(s)	998, 1591
BarI	GAAGNNNNNNTAC	2 cut(s)	1561, 1593
BauI	CACGAG	1 cut(s)	872
Bbv12I	GWGCWC	1 cut(s)	1783
BbvI	GCAGC	3 cut(s)	76, 1041, 1349
BccI	CCATC	7 cut(s)	490, 586, 1034, 1070, 1469, 1603, 1628
BceAI	ACGGC	2 cut(s)	25, 1894
BciT130I	CCWGG	4 cut(s)	60, 239, 890, 1752
BclI	TGATCA	1 cut(s)	1144
BcnI	CCSGG	2 cut(s)	1017, 1501
BcoDI	GTCTC	3 cut(s)	412, 1310, 1569
BcuI	ACTAGT	1 cut(s)	248
BfaI	CTAG	2 cut(s)	249, 1521
BfmI	CTRYAG	1 cut(s)	670
BfoI	RGCGCY	1 cut(s)	1182
BfuAI	ACCTGC	1 cut(s)	1616
BglI	GCCNNNNNGGC	1 cut(s)	48
BisI	GCNGC	7 cut(s)	43, 46, 49, 65, 701, 1030, 1338
BlsI	GCNGC	7 cut(s)	44, 47, 50, 66, 702, 1031, 1339
Bme1390I	CCNGG	6 cut(s)	60, 239, 890, 1017, 1501, 1752
Bme18I	GGWCC	1 cut(s)	166
BmgT120I	GGNCC	1 cut(s)	166
BmiI	GGNNCC	7 cut(s)	168, 1000, 1356, 1575, 1593, 1671, 1824
BmrFI	CCNGG	6 cut(s)	60, 239, 890, 1017, 1501, 1752
BmsI	GCATC	5 cut(s)	610, 1372, 1405, 1507, 1612
BoxI	GACNNNNGTC	1 cut(s)	549
BplI	GAGNNNNNCTC	2 cut(s)	541, 573
BpmI	CTGGAG	3 cut(s)	630, 1115, 1203
Bpu10I	CCTNAGC	1 cut(s)	564
BpuMI	CCSGG	2 cut(s)	1017, 1501
BsaHI	GRCGYC	1 cut(s)	243
BsaI	GGTCTC	1 cut(s)	1310
BsaJI	CCNNGG	7 cut(s)	34, 43, 59, 659, 1500, 1587, 1750
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	1 cut(s)	1773
Bse118I	RCCGGY	1 cut(s)	289
Bse3DI	GCAATG	2 cut(s)	642, 900
BseBI	CCWGG	4 cut(s)	60, 239, 890, 1752
BseDI	CCNNGG	7 cut(s)	34, 43, 59, 659, 1500, 1587, 1750
BseGI	GGATG	8 cut(s)	165, 466, 553, 1215, 1453, 1477, 1513, 1873
BseLI	CCNNNNNNNGG	1 cut(s)	1773
BseMI	GCAATG	2 cut(s)	642, 900
BseMII	CTCAG	1 cut(s)	578
BseRI	GAGGAG	1 cut(s)	1347
BseXI	GCAGC	3 cut(s)	76, 1041, 1349
Bsh1236I	CGCG	1 cut(s)	45
BshFI	GGCC	3 cut(s)	12, 42, 1332
BshNI	GGYRCC	2 cut(s)	998, 1591
BsiHKAI	GWGCWC	1 cut(s)	1783
BsiSI	CCGG	3 cut(s)	290, 1016, 1500
BslFI	GGGAC	2 cut(s)	152, 966
BslI	CCNNNNNNNGG	1 cut(s)	1773
BsmAI	GTCTC	3 cut(s)	412, 1310, 1569
BsmFI	GGGAC	2 cut(s)	152, 966
BsnI	GGCC	3 cut(s)	12, 42, 1332
Bso31I	GGTCTC	1 cut(s)	1310
Bsp1286I	GDGCHC	1 cut(s)	1783
Bsp143I	GATC	3 cut(s)	808, 1144, 1669
BspANI	GGCC	3 cut(s)	12, 42, 1332
BspCNI	CTCAG	1 cut(s)	577
BspFNI	CGCG	1 cut(s)	45
BspHI	TCATGA	2 cut(s)	1141, 1314
BspLI	GGNNCC	7 cut(s)	168, 1000, 1356, 1575, 1593, 1671, 1824
BspMI	ACCTGC	1 cut(s)	1616
BspPI	GGATC	3 cut(s)	803, 1664, 1677
BspQI	GCTCTTC	1 cut(s)	1094
BspT107I	GGYRCC	2 cut(s)	998, 1591
BspTNI	GGTCTC	1 cut(s)	1310
BsrDI	GCAATG	2 cut(s)	642, 900
BsrFI	RCCGGY	1 cut(s)	289
BssAI	RCCGGY	1 cut(s)	289
BssECI	CCNNGG	7 cut(s)	34, 43, 59, 659, 1500, 1587, 1750
BssMI	GATC	3 cut(s)	808, 1144, 1669
BssNI	GRCGYC	1 cut(s)	243
BssSI	CACGAG	1 cut(s)	872
BssT1I	CCWWGG	2 cut(s)	659, 1587
Bst2BI	CACGAG	1 cut(s)	872
Bst2UI	CCWGG	4 cut(s)	60, 239, 890, 1752
Bst6I	CTCTTC	4 cut(s)	23, 1094, 1365, 1437
BstACI	GRCGYC	1 cut(s)	243
BstC8I	GCNNGC	2 cut(s)	381, 1551
BstDEI	CTNAG	3 cut(s)	445, 564, 1321
BstDSI	CCRYGG	1 cut(s)	43
BstF5I	GGATG	8 cut(s)	165, 466, 553, 1215, 1453, 1477, 1513, 1873
BstFNI	CGCG	1 cut(s)	45
BstH2I	RGCGCY	1 cut(s)	1182
BstHHI	GCGC	1 cut(s)	1181
BstKTI	GATC	3 cut(s)	811, 1147, 1672
BstMAI	GTCTC	3 cut(s)	412, 1310, 1569
BstMBI	GATC	3 cut(s)	808, 1144, 1669
BstMWI	GCNNNNNNNGC	3 cut(s)	48, 1185, 1766
BstNI	CCWGG	4 cut(s)	60, 239, 890, 1752
BstNSI	RCATGY	1 cut(s)	279
BstPAI	GACNNNNGTC	1 cut(s)	549
BstSCI	CCNGG	6 cut(s)	58, 237, 888, 1015, 1499, 1750
BstSFI	CTRYAG	1 cut(s)	670
BstUI	CGCG	1 cut(s)	45
BstV1I	GCAGC	3 cut(s)	76, 1041, 1349
BstX2I	RGATCY	1 cut(s)	1669
BstYI	RGATCY	1 cut(s)	1669
BsuRI	GGCC	3 cut(s)	12, 42, 1332
BtgI	CCRYGG	1 cut(s)	43
BtgZI	GCGATG	1 cut(s)	1706
BtsCI	GGATG	8 cut(s)	165, 466, 553, 1215, 1453, 1477, 1513, 1873
BtsI	GCAGTG	1 cut(s)	748
BtsIMutI	CAGTG	1 cut(s)	748
BveI	ACCTGC	1 cut(s)	1616
Cac8I	GCNNGC	2 cut(s)	381, 1551
CciI	TCATGA	2 cut(s)	1141, 1314
CfoI	GCGC	1 cut(s)	1181
Cfr10I	RCCGGY	1 cut(s)	289
Cfr13I	GGNCC	1 cut(s)	166
Cfr42I	CCGCGG	1 cut(s)	46
CseI	GACGC	1 cut(s)	1379
Csp6I	GTAC	4 cut(s)	736, 838, 922, 1592
CviAII	CATG	9 cut(s)	156, 276, 455, 962, 1142, 1175, 1315, 1705, 1900
CviQI	GTAC	4 cut(s)	736, 838, 922, 1592
DdeI	CTNAG	3 cut(s)	445, 564, 1321
DpnI	GATC	3 cut(s)	810, 1146, 1671
DpnII	GATC	3 cut(s)	808, 1144, 1669
DrdI	GACNNNNNNGTC	1 cut(s)	242
DseDI	GACNNNNNNGTC	1 cut(s)	242
EaeI	YGGCCR	1 cut(s)	10
Eam1104I	CTCTTC	4 cut(s)	23, 1094, 1365, 1437
EarI	CTCTTC	4 cut(s)	23, 1094, 1365, 1437
EciI	GGCGGA	1 cut(s)	308
Eco130I	CCWWGG	2 cut(s)	659, 1587
Eco31I	GGTCTC	1 cut(s)	1310
Eco47I	GGWCC	1 cut(s)	166
Eco57I	CTGAAG	2 cut(s)	407, 1092
EcoO109I	RGGNCCY	1 cut(s)	166
EcoRII	CCWGG	4 cut(s)	58, 237, 888, 1750
EcoT14I	CCWWGG	2 cut(s)	659, 1587
EcoT22I	ATGCAT	1 cut(s)	963
ErhI	CCWWGG	2 cut(s)	659, 1587
FaeI	CATG	9 cut(s)	159, 279, 458, 965, 1145, 1178, 1318, 1708, 1903
FalI	AAGNNNNNCTT	2 cut(s)	1091, 1123
FaqI	GGGAC	2 cut(s)	152, 966
FatI	CATG	9 cut(s)	155, 275, 454, 961, 1141, 1174, 1314, 1704, 1899
FauI	CCCGC	1 cut(s)	1401
FauNDI	CATATG	1 cut(s)	1828
FbaI	TGATCA	1 cut(s)	1144
Fnu4HI	GCNGC	7 cut(s)	43, 46, 49, 65, 701, 1030, 1338
FokI	GGATG	8 cut(s)	172, 473, 540, 1202, 1460, 1484, 1520, 1880
Fsp4HI	GCNGC	7 cut(s)	43, 46, 49, 65, 701, 1030, 1338
FspBI	CTAG	2 cut(s)	249, 1521
GlaI	GCGC	1 cut(s)	1180
GluI	GCNGC	7 cut(s)	43, 46, 49, 65, 701, 1030, 1338
GsuI	CTGGAG	3 cut(s)	630, 1115, 1203
HaeII	RGCGCY	1 cut(s)	1182
HaeIII	GGCC	3 cut(s)	12, 42, 1332
HapII	CCGG	3 cut(s)	290, 1016, 1500
HgaI	GACGC	1 cut(s)	1379
HhaI	GCGC	1 cut(s)	1181
Hin1I	GRCGYC	1 cut(s)	243
Hin1II	CATG	9 cut(s)	159, 279, 458, 965, 1145, 1178, 1318, 1708, 1903
Hin6I	GCGC	1 cut(s)	1179
HinP1I	GCGC	1 cut(s)	1179
HincII	GTYRAC	3 cut(s)	285, 370, 1390
HindII	GTYRAC	3 cut(s)	285, 370, 1390
HindIII	AAGCTT	1 cut(s)	505
HpaI	GTTAAC	1 cut(s)	285
HpaII	CCGG	3 cut(s)	290, 1016, 1500
HphI	GGTGA	6 cut(s)	554, 626, 964, 1436, 1547, 1640
Hpy166II	GTNNAC	5 cut(s)	285, 370, 972, 1390, 1764
Hpy188I	TCNGA	9 cut(s)	38, 195, 768, 1149, 1220, 1250, 1260, 1516, 1927
Hpy8I	GTNNAC	5 cut(s)	285, 370, 972, 1390, 1764
Hpy99I	CGWCG	1 cut(s)	592
HpyAV	CCTTC	4 cut(s)	157, 1220, 1322, 1587
HpyCH4IV	ACGT	2 cut(s)	243, 319
HpyCH4V	TGCA	6 cut(s)	647, 856, 961, 1198, 1625, 1679
HpyF10VI	GCNNNNNNNGC	3 cut(s)	48, 1185, 1766
HpyF3I	CTNAG	3 cut(s)	445, 564, 1321
HpySE526I	ACGT	2 cut(s)	243, 319
Hsp92I	GRCGYC	1 cut(s)	243
Hsp92II	CATG	9 cut(s)	159, 279, 458, 965, 1145, 1178, 1318, 1708, 1903
HspAI	GCGC	1 cut(s)	1179
KpnI	GGTACC	1 cut(s)	1595
Ksp22I	TGATCA	1 cut(s)	1144
KspAI	GTTAAC	1 cut(s)	285
KspI	CCGCGG	1 cut(s)	46
Kzo9I	GATC	3 cut(s)	808, 1144, 1669
LguI	GCTCTTC	1 cut(s)	1094
LmnI	GCTCC	3 cut(s)	473, 1360, 1822
Lsp1109I	GCAGC	3 cut(s)	76, 1041, 1349
LweI	GCATC	5 cut(s)	610, 1372, 1405, 1507, 1612
MaeI	CTAG	2 cut(s)	249, 1521
MaeII	ACGT	2 cut(s)	243, 319
MaeIII	GTNAC	9 cut(s)	151, 233, 244, 542, 575, 625, 799, 1006, 1436
MalI	GATC	3 cut(s)	810, 1146, 1671
MboI	GATC	3 cut(s)	808, 1144, 1669
MflI	RGATCY	1 cut(s)	1669
MhlI	GDGCHC	1 cut(s)	1783
MluCI	AATT	9 cut(s)	87, 259, 322, 533, 729, 1022, 1163, 1755, 1872
MlyI	GAGTC	5 cut(s)	365, 559, 1215, 1490, 1571
MmeI	TCCRAC	2 cut(s)	549, 1243
Mph1103I	ATGCAT	1 cut(s)	963
MroXI	GAANNNNTTC	1 cut(s)	1103
MseI	TTAA	5 cut(s)	69, 198, 284, 341, 1875
MslI	CAYNNNNRTG	2 cut(s)	459, 789
MspA1I	CMGCKG	3 cut(s)	45, 1032, 1769
MspI	CCGG	3 cut(s)	290, 1016, 1500
MspR9I	CCNGG	6 cut(s)	60, 239, 890, 1017, 1501, 1752
MvaI	CCWGG	4 cut(s)	60, 239, 890, 1752
MvnI	CGCG	1 cut(s)	45
MwoI	GCNNNNNNNGC	3 cut(s)	48, 1185, 1766
NciI	CCSGG	2 cut(s)	1017, 1501
NdeI	CATATG	1 cut(s)	1828
NdeII	GATC	3 cut(s)	808, 1144, 1669
NlaIII	CATG	9 cut(s)	159, 279, 458, 965, 1145, 1178, 1318, 1708, 1903
NlaIV	GGNNCC	7 cut(s)	168, 1000, 1356, 1575, 1593, 1671, 1824
NmuCI	GTSAC	5 cut(s)	233, 244, 542, 575, 1436
NsiI	ATGCAT	1 cut(s)	963
NspI	RCATGY	1 cut(s)	279
PagI	TCATGA	2 cut(s)	1141, 1314
PaqCI	CACCTGC	1 cut(s)	1616
PciI	ACATGT	1 cut(s)	275
PciSI	GCTCTTC	1 cut(s)	1094
PdmI	GAANNNNTTC	1 cut(s)	1103
PfeI	GAWTC	5 cut(s)	55, 488, 1511, 1910, 1922
PkrI	GCNGC	7 cut(s)	44, 47, 50, 66, 702, 1031, 1339
PleI	GAGTC	5 cut(s)	365, 558, 1215, 1490, 1570
PpsI	GAGTC	5 cut(s)	365, 558, 1215, 1490, 1570
PpuMI	RGGWCCY	1 cut(s)	166
PscI	ACATGT	1 cut(s)	275
PshAI	GACNNNNGTC	1 cut(s)	549
PsiI	TTATAA	1 cut(s)	948
Psp5II	RGGWCCY	1 cut(s)	166
Psp6I	CCWGG	4 cut(s)	58, 237, 888, 1750
PspGI	CCWGG	4 cut(s)	58, 237, 888, 1750
PspN4I	GGNNCC	7 cut(s)	168, 1000, 1356, 1575, 1593, 1671, 1824
PspPI	GGNCC	1 cut(s)	166
PspPPI	RGGWCCY	1 cut(s)	166
PsrI	GAACNNNNNNTAC	2 cut(s)	905, 937
PsuI	RGATCY	1 cut(s)	1669
PvuII	CAGCTG	1 cut(s)	1032
RsaI	GTAC	4 cut(s)	737, 839, 923, 1593
RsaNI	GTAC	4 cut(s)	736, 838, 922, 1592
RseI	CAYNNNNRTG	2 cut(s)	459, 789
SacII	CCGCGG	1 cut(s)	46
SapI	GCTCTTC	1 cut(s)	1094
SaqAI	TTAA	5 cut(s)	69, 198, 284, 341, 1875
SatI	GCNGC	7 cut(s)	43, 46, 49, 65, 701, 1030, 1338
Sau3AI	GATC	3 cut(s)	808, 1144, 1669
Sau96I	GGNCC	1 cut(s)	166
SchI	GAGTC	5 cut(s)	365, 559, 1215, 1490, 1571
ScrFI	CCNGG	6 cut(s)	60, 239, 890, 1017, 1501, 1752
SduI	GDGCHC	1 cut(s)	1783
SfaNI	GCATC	5 cut(s)	610, 1372, 1405, 1507, 1612
SfcI	CTRYAG	1 cut(s)	670
Sfr303I	CCGCGG	1 cut(s)	46
SgrAI	CRCCGGYG	1 cut(s)	289
SgrBI	CCGCGG	1 cut(s)	46
SinI	GGWCC	1 cut(s)	166
SmiMI	CAYNNNNRTG	2 cut(s)	459, 789
SpeI	ACTAGT	1 cut(s)	248
Sse9I	AATT	9 cut(s)	87, 259, 322, 533, 729, 1022, 1163, 1755, 1872
SspI	AATATT	1 cut(s)	75
SspMI	CTAG	2 cut(s)	249, 1521
StyD4I	CCNGG	6 cut(s)	58, 237, 888, 1015, 1499, 1750
StyI	CCWWGG	2 cut(s)	659, 1587
TaiI	ACGT	2 cut(s)	246, 322
TaqI	TCGA	2 cut(s)	123, 590
TasI	AATT	9 cut(s)	87, 259, 322, 533, 729, 1022, 1163, 1755, 1872
TatI	WGTACW	2 cut(s)	735, 921
TauI	GCSGC	4 cut(s)	45, 48, 51, 703
TfiI	GAWTC	5 cut(s)	55, 488, 1511, 1910, 1922
Tru1I	TTAA	5 cut(s)	69, 198, 284, 341, 1875
Tru9I	TTAA	5 cut(s)	69, 198, 284, 341, 1875
TscAI	CASTG	1 cut(s)	748
TseFI	GTSAC	5 cut(s)	233, 244, 542, 575, 1436
TseI	GCWGC	3 cut(s)	64, 1029, 1337
Tsp45I	GTSAC	5 cut(s)	233, 244, 542, 575, 1436
TspGWI	ACGGA	5 cut(s)	20, 563, 809, 1394, 1736
TspRI	CASTG	1 cut(s)	748
VpaK11BI	GGWCC	1 cut(s)	166
XapI	RAATTY	4 cut(s)	87, 729, 1022, 1163
XceI	RCATGY	1 cut(s)	279
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1340
XmnI	GAANNNNTTC	1 cut(s)	1103
XspI	CTAG	2 cut(s)	249, 1521
ZraI	GACGTC	1 cut(s)	244
Zsp2I	ATGCAT	1 cut(s)	963

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.