Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004185

Physical Location & Seq

Genomic Coordinates Reverse (-)

5291016 .. 5297056

Gene Structure 6041 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00082480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGACGGAAGGCCATCTCTTCAATAACATCTCTCTCGGCGGCCGCGGCGGCACTAATCCGGGGCAGCTAAAAATACATCCAGGAGGGATTTTTTGGAAGAAACAAGGAGGTGGGAAAGCAATTGAGGTTGATAAGGCGGACATTGTTGGAGTGACATGGATGAAGGTCCCAAAGACAAATCAACTTGGTGTTCGGATTAAAGATGGGTTGTACTATAAATTCATTGGATTTCGAGACCAGGATGTCACTAGTTTAACCAATTATTTCCAAACTACTTTTGGAATAGTAGCAGAGGAGAAGAAGCTTTCTGTCAGTGGGCGTAACTGGGGAGAAGTTGATTTAAGCGATAATATGTTGTCTTTCTTGGTTGACTCCAAGCAAGGATTTGAGAAAGATTCTTTGATGGAAGTAACTTTTCACATTCCCAACTCCAACACTCAATTTATGGGTGATGAGAATCGTCCTCCTGCTCAGGTATTTCGTGACAAAATCATGTCGATGGCAGATGTTGGTGCTGGAGGTGAAGATGCTGTTGTCACATTTGAGAGTATTGCAGTCCTCACACCAAGGGGTCGCTACAATGTTGAACTTCATCTTTCATTCTTGCGGTTGCAAGGGCAGGCTAATGATTTCAAAATTCAGTACAGCAGTGTTGTTCGCCTCTTTCTCCTTCCTAAGTCTAACCAGCCACATACCTTTGTTGTTGTTACTCTTGATCCGCCTATCCGTAAAGGACAAACACTGTATCCACACATTGTTTTGCAGTTTGAAACTGAATATGTAGTTGAAAGTGAACTGGCAATAAGCGATGACCTTTTAAACGGCAAGTACAAAGACAAGTTAGAACCAACTTATAAGGGACTAATTCATGATGTGTTCACCAAAATACTGCATGGATTGTCTGGTGCCAAAATTACTAAACCAGGGAAGTTCCGCAGCTGTCAAGATGGTTATGCTGTGAAGTCTTCACTGAAAGCTGAAGACGGAGTTCTATATCCTCTGGAAAAGAGCTTCTTTTTCCTACCTAAACCTCCTACCCTTATTACTCATGATGTGATTGACTATGTGGAATTTGAGAGGCATGGTGCTGGAGGCTCAAATATGCATTATTTTGATCTTCTTATCAGACTTAAAAGTGAGCAAGAACATCTGTTTAGAAACATTCAGAGGAATGAATATCATACTCTTTTTGACTTCATCAGTTCAAAGGGTATCAAAATCATGAACTTAGGAGATGCTCAAGTAACAGATGGTGTGTCTCCTCTTCTTGAAGAGGCAGATGATGATGCTGTTGTTGACCCACATCTAGTTCGCGTAAAGAATGAAGCTGGTGAGGAAGATAGTGATGAAGAGGATGAAGATTTTGTTATTGAGAAGGATGATGGAGGTTCTCCAACTGATGATTCTGGGGGTGAAGATTCTGATGCTAGTGAAAGTGGAGGCGAGAAAGAGGCAAGTGATTTTTATCACATGTTTTCTGTTGATACTGTGAAGAAAACCAAGCCTGGGATTGCATTTACGGATGTGGGAAGAGTGCTTGGGGACAAGTGGAAGAAGATGTCAGCGGAGGAGAAAGAACCATATGAAGCGAAGGCCCGTCAAGATAAATTACGCTACAAGGATGAAATTAGTGGCTACAACAAGAGTAACACCCCCCAACCCATGAATGTGGATTCAGGGAATGAATCTGACAGCGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000741 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005719 GO:0006355 GO:0006996 GO:0006997 GO:0007275 GO:0008023 GO:0008150 GO:0009553 GO:0009559 GO:0009561 GO:0009791 GO:0009889 GO:0009987 GO:0010197 GO:0010228 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0035101 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0048229 GO:0048284 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071840 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HMG_box POB3_N Rtt106 SSrecog

Protein Analysis

566

Amino Acids

63.26

Weight (kDa)

5.08

Isoelectric Point (pI)

34.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POB3_N	PF17292	7 - 98	6.1e-24	POB3-like N-terminal PH domain
PH1_SSRP1-like	PF21103	176 - 305	2.5e-50	SSRP1 PH domain
Rttp106-like_middle	PF08512	318 - 409	8.9e-23	Histone chaperone Rttp106-like, middle domain
HMG_box_2	PF09011	488 - 546	2.8e-10	HMG-box domain
HMG_box	PF00505	495 - 547	2.2e-12	HMG (high mobility group) box

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28730
fragaria_vesca	FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210
malus_domestica	MD09G1047500.v1.1 MD17G1047600.v1.1
prunus_persica	Prupe.3G271500_v2.0.a1 Prupe.3G271500_v2.0.a1
pyrus_communis	pycom111g03840 pycom17g04240
rosa_chinensis	RchiOBHm_Chr2g0169081
rosa_laevigata	RLG00000021832
rosa_multiflora	Rmu_sc0004901.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082480
rosa_rugosa	Rorug02G0536700
rosa_samantha	Rh2AG608600 Rh2BG621500 Rh2CG590200 Rh2DG632100
rosa_wichuraiana	Rw2G050460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	855
AasI	GACNNNNNNGTC	1 cut(s)	242
AccB1I	GGYRCC	1 cut(s)	905
AccII	CGCG	2 cut(s)	45, 1314
AciI	CCGC	9 cut(s)	39, 43, 45, 48, 137, 607, 719, 934, 1565
AclWI	GGATC	1 cut(s)	710
AcoI	YGGCCR	1 cut(s)	40
AcsI	RAATTY	3 cut(s)	218, 636, 1070
AcuI	CTGAAG	1 cut(s)	999
AfaI	GTAC	3 cut(s)	212, 644, 830
AfiI	CCNNNNNNNGG	1 cut(s)	1506
AflIII	ACRYGT	1 cut(s)	1470
AgsI	TTSAA	7 cut(s)	22, 587, 634, 770, 788, 1206, 1271
AhlI	ACTAGT	1 cut(s)	248
AjnI	CCWGG	4 cut(s)	79, 237, 922, 1504
AjuI	GAANNNNNNNTTGG	2 cut(s)	1387, 1419
AluBI	AGCT	6 cut(s)	67, 304, 939, 977, 1011, 1328
AluI	AGCT	6 cut(s)	67, 304, 939, 977, 1011, 1328
Alw26I	GTCTC	2 cut(s)	228, 1263
AlwI	GGATC	1 cut(s)	710
AoxI	GGCC	3 cut(s)	10, 40, 1593
ApeKI	GCWGC	2 cut(s)	64, 936
ApoI	RAATTY	3 cut(s)	218, 636, 1070
AspS9I	GGNCC	2 cut(s)	166, 1594
AsuC2I	CCSGG	1 cut(s)	60
AsuHPI	GGTGA	5 cut(s)	461, 533, 871, 1343, 1424
AvaII	GGWCC	1 cut(s)	166
BanI	GGYRCC	1 cut(s)	905
BbsI	GAAGAC	2 cut(s)	957, 987
BbvI	GCAGC	2 cut(s)	76, 948
BccI	CCATC	7 cut(s)	21, 197, 397, 493, 941, 1244, 1376
BceAI	ACGGC	1 cut(s)	838
BciT130I	CCWGG	4 cut(s)	81, 239, 924, 1506
BciVI	GTATCC	1 cut(s)	756
BcnI	CCSGG	1 cut(s)	60
BcoDI	GTCTC	2 cut(s)	228, 1263
BcuI	ACTAGT	1 cut(s)	248
BfaI	CTAG	3 cut(s)	249, 1307, 1428
BfuI	GTATCC	1 cut(s)	756
BglI	GCCNNNNNGGC	1 cut(s)	48
BisI	GCNGC	6 cut(s)	40, 43, 46, 49, 65, 937
BlsI	GCNGC	6 cut(s)	41, 44, 47, 50, 66, 938
Bme1390I	CCNGG	5 cut(s)	60, 81, 239, 924, 1506
Bme18I	GGWCC	1 cut(s)	166
BmgT120I	GGNCC	2 cut(s)	166, 1594
BmiI	GGNNCC	2 cut(s)	168, 907
BmrFI	CCNGG	5 cut(s)	60, 81, 239, 924, 1506
BmrI	ACTGGG	1 cut(s)	334
BmsI	GCATC	4 cut(s)	517, 1225, 1276, 1414
BmuI	ACTGGG	1 cut(s)	334
BpiI	GAAGAC	2 cut(s)	957, 987
BpmI	CTGGAG	2 cut(s)	537, 1110
Bpu10I	CCTNAGC	1 cut(s)	471
BpuEI	CTTGAG	1 cut(s)	1224
BpuMI	CCSGG	1 cut(s)	60
BsaBI	GATNNNNATC	2 cut(s)	456, 1464
BsaI	GGTCTC	1 cut(s)	228
BsaJI	CCNNGG	5 cut(s)	43, 59, 566, 923, 1505
Bsc4I	CCNNNNNNNGG	1 cut(s)	1506
Bse1I	ACTGG	2 cut(s)	329, 801
Bse8I	GATNNNNATC	2 cut(s)	456, 1464
BseBI	CCWGG	4 cut(s)	81, 239, 924, 1506
BseDI	CCNNGG	5 cut(s)	43, 59, 566, 923, 1505
BseGI	GGATG	7 cut(s)	76, 165, 247, 1360, 1384, 1528, 1627
BseJI	GATNNNNATC	2 cut(s)	456, 1464
BseLI	CCNNNNNNNGG	1 cut(s)	1506
BseMII	CTCAG	1 cut(s)	485
BseNI	ACTGG	2 cut(s)	329, 801
BseRI	GAGGAG	3 cut(s)	308, 1251, 1583
BseX3I	CGGCCG	1 cut(s)	40
BseXI	GCAGC	2 cut(s)	76, 948
Bsh1236I	CGCG	2 cut(s)	45, 1314
Bsh1285I	CGRYCG	1 cut(s)	43
BshFI	GGCC	3 cut(s)	12, 42, 1595
BshNI	GGYRCC	1 cut(s)	905
BsiEI	CGRYCG	1 cut(s)	43
BsiSI	CCGG	1 cut(s)	59
BslFI	GGGAC	3 cut(s)	152, 873, 1556
BslI	CCNNNNNNNGG	1 cut(s)	1506
BsmAI	GTCTC	2 cut(s)	228, 1263
BsmFI	GGGAC	3 cut(s)	152, 873, 1556
BsnI	GGCC	3 cut(s)	12, 42, 1595
Bso31I	GGTCTC	1 cut(s)	228
Bsp143I	GATC	2 cut(s)	715, 1114
BspACI	CCGC	9 cut(s)	39, 43, 45, 48, 137, 607, 719, 934, 1565
BspANI	GGCC	3 cut(s)	12, 42, 1595
BspCNI	CTCAG	1 cut(s)	484
BspFNI	CGCG	2 cut(s)	45, 1314
BspHI	TCATGA	3 cut(s)	868, 1048, 1221
BspLI	GGNNCC	2 cut(s)	168, 907
BspPI	GGATC	1 cut(s)	710
BspT107I	GGYRCC	1 cut(s)	905
BspTNI	GGTCTC	1 cut(s)	228
BsrI	ACTGG	2 cut(s)	329, 801
BssECI	CCNNGG	5 cut(s)	43, 59, 566, 923, 1505
BssMI	GATC	2 cut(s)	715, 1114
BssT1I	CCWWGG	1 cut(s)	566
Bst2UI	CCWGG	4 cut(s)	81, 239, 924, 1506
Bst4CI	ACNGT	2 cut(s)	744, 1489
Bst6I	CTCTTC	5 cut(s)	23, 1266, 1269, 1344, 1525
BstC8I	GCNNGC	1 cut(s)	621
BstDEI	CTNAG	3 cut(s)	471, 675, 1228
BstDSI	CCRYGG	1 cut(s)	43
BstF5I	GGATG	7 cut(s)	76, 165, 247, 1360, 1384, 1528, 1627
BstFNI	CGCG	2 cut(s)	45, 1314
BstKTI	GATC	2 cut(s)	718, 1117
BstMAI	GTCTC	2 cut(s)	228, 1263
BstMBI	GATC	2 cut(s)	715, 1114
BstMCI	CGRYCG	1 cut(s)	43
BstMWI	GCNNNNNNNGC	2 cut(s)	45, 48
BstNI	CCWGG	4 cut(s)	81, 239, 924, 1506
BstNSI	RCATGY	1 cut(s)	1474
BstSCI	CCNGG	5 cut(s)	58, 79, 237, 922, 1504
BstUI	CGCG	2 cut(s)	45, 1314
BstV1I	GCAGC	2 cut(s)	76, 948
BstV2I	GAAGAC	2 cut(s)	957, 987
BstXI	CCANNNNNNTGG	1 cut(s)	1669
BstZI	CGGCCG	1 cut(s)	40
BsuI	GTATCC	1 cut(s)	756
BsuRI	GGCC	3 cut(s)	12, 42, 1595
BtgI	CCRYGG	1 cut(s)	43
BtgZI	GCGATG	1 cut(s)	822
BtsCI	GGATG	7 cut(s)	76, 165, 247, 1360, 1384, 1528, 1627
BtsI	GCAGTG	1 cut(s)	655
BtsIMutI	CAGTG	4 cut(s)	319, 655, 740, 968
Cac8I	GCNNGC	1 cut(s)	621
CciI	TCATGA	3 cut(s)	868, 1048, 1221
CciNI	GCGGCCGC	1 cut(s)	40
Cfr13I	GGNCC	2 cut(s)	166, 1594
Cfr42I	CCGCGG	1 cut(s)	46
Csp6I	GTAC	3 cut(s)	211, 643, 829
CviAII	CATG	9 cut(s)	156, 493, 869, 893, 1049, 1082, 1222, 1471, 1663
CviQI	GTAC	3 cut(s)	211, 643, 829
DdeI	CTNAG	3 cut(s)	471, 675, 1228
DpnI	GATC	2 cut(s)	717, 1116
DpnII	GATC	2 cut(s)	715, 1114
DraI	TTTAAA	1 cut(s)	819
DrdI	GACNNNNNNGTC	1 cut(s)	242
DseDI	GACNNNNNNGTC	1 cut(s)	242
EaeI	YGGCCR	1 cut(s)	40
EagI	CGGCCG	1 cut(s)	40
Eam1104I	CTCTTC	5 cut(s)	23, 1266, 1269, 1344, 1525
EarI	CTCTTC	5 cut(s)	23, 1266, 1269, 1344, 1525
EciI	GGCGGA	2 cut(s)	152, 708
EclXI	CGGCCG	1 cut(s)	40
Eco130I	CCWWGG	1 cut(s)	566
Eco31I	GGTCTC	1 cut(s)	228
Eco47I	GGWCC	1 cut(s)	166
Eco52I	CGGCCG	1 cut(s)	40
Eco57I	CTGAAG	1 cut(s)	999
EcoO109I	RGGNCCY	1 cut(s)	166
EcoRII	CCWGG	4 cut(s)	79, 237, 922, 1504
EcoT14I	CCWWGG	1 cut(s)	566
EcoT22I	ATGCAT	1 cut(s)	1107
ErhI	CCWWGG	1 cut(s)	566
FaeI	CATG	9 cut(s)	159, 496, 872, 896, 1052, 1085, 1225, 1474, 1666
FalI	AAGNNNNNCTT	2 cut(s)	998, 1030
FaqI	GGGAC	3 cut(s)	152, 873, 1556
FatI	CATG	9 cut(s)	155, 492, 868, 892, 1048, 1081, 1221, 1470, 1662
FauNDI	CATATG	1 cut(s)	1582
Fnu4HI	GCNGC	6 cut(s)	40, 43, 46, 49, 65, 937
FokI	GGATG	7 cut(s)	63, 172, 254, 1367, 1391, 1535, 1634
Fsp4HI	GCNGC	6 cut(s)	40, 43, 46, 49, 65, 937
FspBI	CTAG	3 cut(s)	249, 1307, 1428
GluI	GCNGC	6 cut(s)	40, 43, 46, 49, 65, 937
GsuI	CTGGAG	2 cut(s)	537, 1110
HaeIII	GGCC	3 cut(s)	12, 42, 1595
HapII	CCGG	1 cut(s)	59
Hin1II	CATG	9 cut(s)	159, 496, 872, 896, 1052, 1085, 1225, 1474, 1666
HincII	GTYRAC	2 cut(s)	370, 1297
HindII	GTYRAC	2 cut(s)	370, 1297
HindIII	AAGCTT	1 cut(s)	302
HinfI	GANTC	7 cut(s)	371, 395, 457, 1403, 1418, 1673, 1685
HpaII	CCGG	1 cut(s)	59
HphI	GGTGA	5 cut(s)	461, 533, 871, 1343, 1424
Hpy166II	GTNNAC	4 cut(s)	370, 794, 879, 1297
Hpy188I	TCNGA	5 cut(s)	195, 1127, 1167, 1423, 1690
Hpy8I	GTNNAC	4 cut(s)	370, 794, 879, 1297
HpyAV	CCTTC	4 cut(s)	157, 680, 1369, 1585
HpyCH4III	ACNGT	2 cut(s)	744, 1489
HpyCH4V	TGCA	6 cut(s)	554, 613, 763, 892, 1105, 1514
HpyF10VI	GCNNNNNNNGC	2 cut(s)	45, 48
HpyF3I	CTNAG	3 cut(s)	471, 675, 1228
Hsp92II	CATG	9 cut(s)	159, 496, 872, 896, 1052, 1085, 1225, 1474, 1666
KspI	CCGCGG	1 cut(s)	46
Kzo9I	GATC	2 cut(s)	715, 1114
Lsp1109I	GCAGC	2 cut(s)	76, 948
LweI	GCATC	4 cut(s)	517, 1225, 1276, 1414
MaeI	CTAG	3 cut(s)	249, 1307, 1428
MaeIII	GTNAC	9 cut(s)	151, 244, 320, 409, 482, 535, 706, 1243, 1646
MalI	GATC	2 cut(s)	717, 1116
MboI	GATC	2 cut(s)	715, 1114
MfeI	CAATTG	1 cut(s)	120
MlyI	GAGTC	1 cut(s)	365
MmeI	TCCRAC	3 cut(s)	127, 456, 1418
Mph1103I	ATGCAT	1 cut(s)	1107
MseI	TTAA	5 cut(s)	198, 254, 341, 818, 1131
MslI	CAYNNNNRTG	2 cut(s)	497, 1667
MspA1I	CMGCKG	3 cut(s)	45, 939, 1565
MspI	CCGG	1 cut(s)	59
MspR9I	CCNGG	5 cut(s)	60, 81, 239, 924, 1506
MunI	CAATTG	1 cut(s)	120
MvaI	CCWGG	4 cut(s)	81, 239, 924, 1506
MvnI	CGCG	2 cut(s)	45, 1314
MwoI	GCNNNNNNNGC	2 cut(s)	45, 48
NciI	CCSGG	1 cut(s)	60
NdeI	CATATG	1 cut(s)	1582
NdeII	GATC	2 cut(s)	715, 1114
NlaIII	CATG	9 cut(s)	159, 496, 872, 896, 1052, 1085, 1225, 1474, 1666
NlaIV	GGNNCC	2 cut(s)	168, 907
NmeAIII	GCCGAG	1 cut(s)	15
NmuCI	GTSAC	4 cut(s)	151, 244, 482, 535
NotI	GCGGCCGC	1 cut(s)	40
NsiI	ATGCAT	1 cut(s)	1107
NspI	RCATGY	1 cut(s)	1474
PagI	TCATGA	3 cut(s)	868, 1048, 1221
PciI	ACATGT	1 cut(s)	1470
PfeI	GAWTC	6 cut(s)	395, 457, 1403, 1418, 1673, 1685
PfoI	TCCNGGA	1 cut(s)	79
PkrI	GCNGC	6 cut(s)	41, 44, 47, 50, 66, 938
PleI	GAGTC	1 cut(s)	365
PpsI	GAGTC	1 cut(s)	365
PpuMI	RGGWCCY	1 cut(s)	166
PscI	ACATGT	1 cut(s)	1470
PsiI	TTATAA	1 cut(s)	855
Psp5II	RGGWCCY	1 cut(s)	166
Psp6I	CCWGG	4 cut(s)	79, 237, 922, 1504
PspGI	CCWGG	4 cut(s)	79, 237, 922, 1504
PspN4I	GGNNCC	2 cut(s)	168, 907
PspPI	GGNCC	2 cut(s)	166, 1594
PspPPI	RGGWCCY	1 cut(s)	166
PvuII	CAGCTG	1 cut(s)	939
RsaI	GTAC	3 cut(s)	212, 644, 830
RsaNI	GTAC	3 cut(s)	211, 643, 829
RseI	CAYNNNNRTG	2 cut(s)	497, 1667
SacII	CCGCGG	1 cut(s)	46
SaqAI	TTAA	5 cut(s)	198, 254, 341, 818, 1131
SatI	GCNGC	6 cut(s)	40, 43, 46, 49, 65, 937
Sau3AI	GATC	2 cut(s)	715, 1114
Sau96I	GGNCC	2 cut(s)	166, 1594
SchI	GAGTC	1 cut(s)	365
ScrFI	CCNGG	5 cut(s)	60, 81, 239, 924, 1506
SfaNI	GCATC	4 cut(s)	517, 1225, 1276, 1414
Sfr303I	CCGCGG	1 cut(s)	46
SgrBI	CCGCGG	1 cut(s)	46
SinI	GGWCC	1 cut(s)	166
SmiMI	CAYNNNNRTG	2 cut(s)	497, 1667
SmlI	CTYRAG	1 cut(s)	1239
SmoI	CTYRAG	1 cut(s)	1239
SpeI	ACTAGT	1 cut(s)	248
SsiI	CCGC	9 cut(s)	39, 43, 45, 48, 137, 607, 719, 934, 1565
SspMI	CTAG	3 cut(s)	249, 1307, 1428
StyD4I	CCNGG	5 cut(s)	58, 79, 237, 922, 1504
StyI	CCWWGG	1 cut(s)	566
TaaI	ACNGT	2 cut(s)	744, 1489
TaqI	TCGA	2 cut(s)	232, 497
TatI	WGTACW	3 cut(s)	210, 642, 828
TauI	GCSGC	4 cut(s)	42, 45, 48, 51
TfiI	GAWTC	6 cut(s)	395, 457, 1403, 1418, 1673, 1685
Tru1I	TTAA	5 cut(s)	198, 254, 341, 818, 1131
Tru9I	TTAA	5 cut(s)	198, 254, 341, 818, 1131
TscAI	CASTG	4 cut(s)	319, 655, 747, 975
TseFI	GTSAC	4 cut(s)	151, 244, 482, 535
TseI	GCWGC	2 cut(s)	64, 936
Tsp45I	GTSAC	4 cut(s)	151, 244, 482, 535
TspGWI	ACGGA	4 cut(s)	20, 716, 999, 1535
TspRI	CASTG	4 cut(s)	319, 655, 747, 975
VpaK11BI	GGWCC	1 cut(s)	166
XapI	RAATTY	3 cut(s)	218, 636, 1070
XceI	RCATGY	1 cut(s)	1474
XcmI	CCANNNNNNNNNTGG	1 cut(s)	275
XspI	CTAG	3 cut(s)	249, 1307, 1428
Zsp2I	ATGCAT	1 cut(s)	1107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.