Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G28730 |
| fragaria_vesca | FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 |
| malus_domestica | MD09G1047500.v1.1 MD17G1047600.v1.1 |
| prunus_persica | Prupe.3G271500_v2.0.a1 Prupe.3G271500_v2.0.a1 |
| pyrus_communis | pycom111g03840 pycom17g04240 |
| rosa_chinensis | RchiOBHm_Chr2g0169081 |
| rosa_laevigata | RLG00000021832 |
| rosa_multiflora | Rmu_sc0004901.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00082480 |
| rosa_rugosa | Rorug02G0536700 |
| rosa_samantha | Rh2AG608600 Rh2BG621500 Rh2CG590200 Rh2DG632100 |
| rosa_wichuraiana | Rw2G050460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 540, 1328 |
| AatII | GACGTC | 1 cut(s) | 33 |
| AccB1I | GGYRCC | 2 cut(s) | 590, 1183 |
| AccII | CGCG | 1 cut(s) | 999 |
| AciI | CCGC | 4 cut(s) | 292, 404, 619, 1352 |
| AclWI | GGATC | 3 cut(s) | 395, 1253, 1266 |
| AcsI | RAATTY | 2 cut(s) | 321, 755 |
| AcuI | CTGAAG | 1 cut(s) | 684 |
| AcyI | GRCGYC | 1 cut(s) | 30 |
| AfaI | GTAC | 2 cut(s) | 329, 515 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1351 |
| AgsI | TTSAA | 7 cut(s) | 272, 319, 455, 473, 956, 1173, 1179 |
| AjnI | CCWGG | 2 cut(s) | 607, 1157 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1072, 1104 |
| AluBI | AGCT | 5 cut(s) | 13, 624, 662, 696, 1013 |
| AluI | AGCT | 5 cut(s) | 13, 624, 662, 696, 1013 |
| Alw26I | GTCTC | 1 cut(s) | 948 |
| AlwI | GGATC | 3 cut(s) | 395, 1253, 1266 |
| AoxI | GGCC | 1 cut(s) | 1380 |
| ApeKI | GCWGC | 2 cut(s) | 621, 1349 |
| ApoI | RAATTY | 2 cut(s) | 321, 755 |
| AspS9I | GGNCC | 2 cut(s) | 1226, 1381 |
| AsuHPI | GGTGA | 6 cut(s) | 25, 146, 218, 556, 1028, 1109 |
| AvaII | GGWCC | 1 cut(s) | 1226 |
| BamHI | GGATCC | 1 cut(s) | 1258 |
| BanI | GGYRCC | 2 cut(s) | 590, 1183 |
| BanII | GRGCYC | 1 cut(s) | 1158 |
| BbsI | GAAGAC | 2 cut(s) | 642, 672 |
| BbvI | GCAGC | 2 cut(s) | 633, 1361 |
| BccI | CCATC | 8 cut(s) | 82, 178, 626, 929, 1061, 1195, 1217, 1303 |
| BceAI | ACGGC | 1 cut(s) | 523 |
| BciT130I | CCWGG | 2 cut(s) | 609, 1159 |
| BciVI | GTATCC | 1 cut(s) | 441 |
| BcoDI | GTCTC | 1 cut(s) | 948 |
| BfaI | CTAG | 1 cut(s) | 1113 |
| BfuI | GTATCC | 1 cut(s) | 441 |
| BisI | GCNGC | 2 cut(s) | 622, 1350 |
| BlsI | GCNGC | 2 cut(s) | 623, 1351 |
| Bme1390I | CCNGG | 2 cut(s) | 609, 1159 |
| Bme18I | GGWCC | 1 cut(s) | 1226 |
| BmgT120I | GGNCC | 2 cut(s) | 1226, 1381 |
| BmiI | GGNNCC | 4 cut(s) | 592, 1155, 1185, 1260 |
| BmrFI | CCNGG | 2 cut(s) | 609, 1159 |
| BmsI | GCATC | 4 cut(s) | 202, 910, 961, 1099 |
| BpiI | GAAGAC | 2 cut(s) | 642, 672 |
| BpmI | CTGGAG | 3 cut(s) | 84, 222, 795 |
| Bpu10I | CCTNAGC | 1 cut(s) | 156 |
| BpuEI | CTTGAG | 1 cut(s) | 909 |
| BsaBI | GATNNNNATC | 1 cut(s) | 141 |
| BsaHI | GRCGYC | 1 cut(s) | 30 |
| BsaJI | CCNNGG | 3 cut(s) | 251, 608, 1157 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1304, 1334 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1351 |
| Bse1I | ACTGG | 2 cut(s) | 67, 486 |
| Bse8I | GATNNNNATC | 1 cut(s) | 141 |
| BseBI | CCWGG | 2 cut(s) | 609, 1159 |
| BseDI | CCNNGG | 3 cut(s) | 251, 608, 1157 |
| BseGI | GGATG | 4 cut(s) | 58, 1045, 1069, 1414 |
| BseJI | GATNNNNATC | 1 cut(s) | 141 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1351 |
| BseMII | CTCAG | 1 cut(s) | 170 |
| BseNI | ACTGG | 2 cut(s) | 67, 486 |
| BseRI | GAGGAG | 2 cut(s) | 936, 1370 |
| BseXI | GCAGC | 2 cut(s) | 633, 1361 |
| Bsh1236I | CGCG | 1 cut(s) | 999 |
| BshFI | GGCC | 1 cut(s) | 1382 |
| BshNI | GGYRCC | 2 cut(s) | 590, 1183 |
| BslFI | GGGAC | 1 cut(s) | 558 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1351 |
| BsmAI | GTCTC | 1 cut(s) | 948 |
| BsmFI | GGGAC | 1 cut(s) | 558 |
| BsnI | GGCC | 1 cut(s) | 1382 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1158 |
| Bsp143I | GATC | 3 cut(s) | 400, 799, 1258 |
| BspACI | CCGC | 4 cut(s) | 292, 404, 619, 1352 |
| BspANI | GGCC | 1 cut(s) | 1382 |
| BspCNI | CTCAG | 1 cut(s) | 169 |
| BspFNI | CGCG | 1 cut(s) | 999 |
| BspHI | TCATGA | 3 cut(s) | 553, 733, 906 |
| BspLI | GGNNCC | 4 cut(s) | 592, 1155, 1185, 1260 |
| BspPI | GGATC | 3 cut(s) | 395, 1253, 1266 |
| BspT107I | GGYRCC | 2 cut(s) | 590, 1183 |
| BsrI | ACTGG | 2 cut(s) | 67, 486 |
| BssECI | CCNNGG | 3 cut(s) | 251, 608, 1157 |
| BssMI | GATC | 3 cut(s) | 400, 799, 1258 |
| BssNI | GRCGYC | 1 cut(s) | 30 |
| BssT1I | CCWWGG | 1 cut(s) | 251 |
| Bst2UI | CCWGG | 2 cut(s) | 609, 1159 |
| Bst4CI | ACNGT | 2 cut(s) | 429, 1339 |
| Bst6I | CTCTTC | 3 cut(s) | 951, 954, 1029 |
| BstACI | GRCGYC | 1 cut(s) | 30 |
| BstC8I | GCNNGC | 2 cut(s) | 306, 1143 |
| BstDEI | CTNAG | 4 cut(s) | 37, 156, 360, 913 |
| BstF5I | GGATG | 4 cut(s) | 58, 1045, 1069, 1414 |
| BstFNI | CGCG | 1 cut(s) | 999 |
| BstKTI | GATC | 3 cut(s) | 403, 802, 1261 |
| BstMAI | GTCTC | 1 cut(s) | 948 |
| BstMBI | GATC | 3 cut(s) | 400, 799, 1258 |
| BstNI | CCWGG | 2 cut(s) | 609, 1159 |
| BstSCI | CCNGG | 2 cut(s) | 607, 1157 |
| BstUI | CGCG | 1 cut(s) | 999 |
| BstV1I | GCAGC | 2 cut(s) | 633, 1361 |
| BstV2I | GAAGAC | 2 cut(s) | 642, 672 |
| BstX2I | RGATCY | 1 cut(s) | 1258 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1456 |
| BstYI | RGATCY | 1 cut(s) | 1258 |
| BsuI | GTATCC | 1 cut(s) | 441 |
| BsuRI | GGCC | 1 cut(s) | 1382 |
| BtgZI | GCGATG | 1 cut(s) | 1295 |
| BtsCI | GGATG | 4 cut(s) | 58, 1045, 1069, 1414 |
| BtsI | GCAGTG | 1 cut(s) | 340 |
| BtsIMutI | CAGTG | 4 cut(s) | 60, 340, 425, 653 |
| Cac8I | GCNNGC | 2 cut(s) | 306, 1143 |
| CciI | TCATGA | 3 cut(s) | 553, 733, 906 |
| Cfr13I | GGNCC | 2 cut(s) | 1226, 1381 |
| Csp6I | GTAC | 2 cut(s) | 328, 514 |
| CviAII | CATG | 8 cut(s) | 47, 554, 578, 734, 767, 907, 1294, 1450 |
| CviQI | GTAC | 2 cut(s) | 328, 514 |
| DdeI | CTNAG | 4 cut(s) | 37, 156, 360, 913 |
| DpnI | GATC | 3 cut(s) | 402, 801, 1260 |
| DpnII | GATC | 3 cut(s) | 400, 799, 1258 |
| DraI | TTTAAA | 2 cut(s) | 504, 891 |
| Eam1104I | CTCTTC | 3 cut(s) | 951, 954, 1029 |
| EarI | CTCTTC | 3 cut(s) | 951, 954, 1029 |
| EciI | GGCGGA | 1 cut(s) | 393 |
| Eco130I | CCWWGG | 1 cut(s) | 251 |
| Eco24I | GRGCYC | 1 cut(s) | 1158 |
| Eco47I | GGWCC | 1 cut(s) | 1226 |
| Eco57I | CTGAAG | 1 cut(s) | 684 |
| EcoRII | CCWGG | 2 cut(s) | 607, 1157 |
| EcoT14I | CCWWGG | 1 cut(s) | 251 |
| EcoT22I | ATGCAT | 1 cut(s) | 792 |
| EcoT38I | GRGCYC | 1 cut(s) | 1158 |
| ErhI | CCWWGG | 1 cut(s) | 251 |
| FaeI | CATG | 8 cut(s) | 50, 557, 581, 737, 770, 910, 1297, 1453 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 683, 715 |
| FaqI | GGGAC | 1 cut(s) | 558 |
| FatI | CATG | 8 cut(s) | 46, 553, 577, 733, 766, 906, 1293, 1449 |
| FauNDI | CATATG | 1 cut(s) | 1369 |
| Fnu4HI | GCNGC | 2 cut(s) | 622, 1350 |
| FokI | GGATG | 4 cut(s) | 65, 1052, 1076, 1421 |
| FriOI | GRGCYC | 1 cut(s) | 1158 |
| Fsp4HI | GCNGC | 2 cut(s) | 622, 1350 |
| FspBI | CTAG | 1 cut(s) | 1113 |
| GluI | GCNGC | 2 cut(s) | 622, 1350 |
| GsuI | CTGGAG | 3 cut(s) | 84, 222, 795 |
| HaeIII | GGCC | 1 cut(s) | 1382 |
| Hin1I | GRCGYC | 1 cut(s) | 30 |
| Hin1II | CATG | 8 cut(s) | 50, 557, 581, 737, 770, 910, 1297, 1453 |
| HincII | GTYRAC | 1 cut(s) | 982 |
| HindII | GTYRAC | 1 cut(s) | 982 |
| HinfI | GANTC | 6 cut(s) | 80, 142, 1088, 1103, 1460, 1472 |
| HphI | GGTGA | 6 cut(s) | 25, 146, 218, 556, 1028, 1109 |
| Hpy166II | GTNNAC | 4 cut(s) | 479, 564, 982, 1342 |
| Hpy188I | TCNGA | 4 cut(s) | 812, 852, 1108, 1477 |
| Hpy188III | TCNNGA | 9 cut(s) | 167, 398, 554, 629, 686, 734, 907, 953, 1388 |
| Hpy8I | GTNNAC | 4 cut(s) | 479, 564, 982, 1342 |
| Hpy99I | CGWCG | 1 cut(s) | 32 |
| HpyAV | CCTTC | 4 cut(s) | 365, 1054, 1179, 1249 |
| HpyCH4III | ACNGT | 2 cut(s) | 429, 1339 |
| HpyCH4IV | ACGT | 1 cut(s) | 30 |
| HpyCH4V | TGCA | 7 cut(s) | 239, 298, 448, 577, 790, 1268, 1349 |
| HpyF3I | CTNAG | 4 cut(s) | 37, 156, 360, 913 |
| HpySE526I | ACGT | 1 cut(s) | 30 |
| Hsp92I | GRCGYC | 1 cut(s) | 30 |
| Hsp92II | CATG | 8 cut(s) | 50, 557, 581, 737, 770, 910, 1297, 1453 |
| Kzo9I | GATC | 3 cut(s) | 400, 799, 1258 |
| LmnI | GCTCC | 2 cut(s) | 65, 1153 |
| Lsp1109I | GCAGC | 2 cut(s) | 633, 1361 |
| LweI | GCATC | 4 cut(s) | 202, 910, 961, 1099 |
| MaeI | CTAG | 1 cut(s) | 1113 |
| MaeII | ACGT | 1 cut(s) | 30 |
| MaeIII | GTNAC | 7 cut(s) | 31, 94, 167, 220, 391, 928, 1433 |
| MalI | GATC | 3 cut(s) | 402, 801, 1260 |
| MboI | GATC | 3 cut(s) | 400, 799, 1258 |
| MflI | RGATCY | 1 cut(s) | 1258 |
| MhlI | GDGCHC | 1 cut(s) | 1158 |
| MluCI | AATT | 8 cut(s) | 125, 174, 321, 549, 597, 755, 1394, 1413 |
| MmeI | TCCRAC | 2 cut(s) | 141, 1103 |
| Mph1103I | ATGCAT | 1 cut(s) | 792 |
| MseI | TTAA | 2 cut(s) | 503, 890 |
| MslI | CAYNNNNRTG | 2 cut(s) | 51, 1454 |
| MspA1I | CMGCKG | 2 cut(s) | 624, 1352 |
| MspR9I | CCNGG | 2 cut(s) | 609, 1159 |
| MvaI | CCWGG | 2 cut(s) | 609, 1159 |
| MvnI | CGCG | 1 cut(s) | 999 |
| NdeI | CATATG | 1 cut(s) | 1369 |
| NdeII | GATC | 3 cut(s) | 400, 799, 1258 |
| NlaIII | CATG | 8 cut(s) | 50, 557, 581, 737, 770, 910, 1297, 1453 |
| NlaIV | GGNNCC | 4 cut(s) | 592, 1155, 1185, 1260 |
| NmuCI | GTSAC | 3 cut(s) | 31, 167, 220 |
| NsiI | ATGCAT | 1 cut(s) | 792 |
| PagI | TCATGA | 3 cut(s) | 553, 733, 906 |
| PfeI | GAWTC | 6 cut(s) | 80, 142, 1088, 1103, 1460, 1472 |
| PkrI | GCNGC | 2 cut(s) | 623, 1351 |
| PsiI | TTATAA | 2 cut(s) | 540, 1328 |
| Psp6I | CCWGG | 2 cut(s) | 607, 1157 |
| PspGI | CCWGG | 2 cut(s) | 607, 1157 |
| PspN4I | GGNNCC | 4 cut(s) | 592, 1155, 1185, 1260 |
| PspPI | GGNCC | 2 cut(s) | 1226, 1381 |
| PsuI | RGATCY | 1 cut(s) | 1258 |
| PvuII | CAGCTG | 1 cut(s) | 624 |
| RsaI | GTAC | 2 cut(s) | 329, 515 |
| RsaNI | GTAC | 2 cut(s) | 328, 514 |
| RseI | CAYNNNNRTG | 2 cut(s) | 51, 1454 |
| SaqAI | TTAA | 2 cut(s) | 503, 890 |
| SatI | GCNGC | 2 cut(s) | 622, 1350 |
| Sau3AI | GATC | 3 cut(s) | 400, 799, 1258 |
| Sau96I | GGNCC | 2 cut(s) | 1226, 1381 |
| ScrFI | CCNGG | 2 cut(s) | 609, 1159 |
| SduI | GDGCHC | 1 cut(s) | 1158 |
| SfaNI | GCATC | 4 cut(s) | 202, 910, 961, 1099 |
| SinI | GGWCC | 1 cut(s) | 1226 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 51, 1454 |
| SmlI | CTYRAG | 1 cut(s) | 924 |
| SmoI | CTYRAG | 1 cut(s) | 924 |
| Sse9I | AATT | 8 cut(s) | 125, 174, 321, 549, 597, 755, 1394, 1413 |
| SsiI | CCGC | 4 cut(s) | 292, 404, 619, 1352 |
| SspMI | CTAG | 1 cut(s) | 1113 |
| StyD4I | CCNGG | 2 cut(s) | 607, 1157 |
| StyI | CCWWGG | 1 cut(s) | 251 |
| TaaI | ACNGT | 2 cut(s) | 429, 1339 |
| TaiI | ACGT | 1 cut(s) | 33 |
| TaqI | TCGA | 2 cut(s) | 182, 1215 |
| TasI | AATT | 8 cut(s) | 125, 174, 321, 549, 597, 755, 1394, 1413 |
| TatI | WGTACW | 2 cut(s) | 327, 513 |
| TfiI | GAWTC | 6 cut(s) | 80, 142, 1088, 1103, 1460, 1472 |
| Tru1I | TTAA | 2 cut(s) | 503, 890 |
| Tru9I | TTAA | 2 cut(s) | 503, 890 |
| TscAI | CASTG | 4 cut(s) | 67, 340, 432, 660 |
| TseFI | GTSAC | 3 cut(s) | 31, 167, 220 |
| TseI | GCWGC | 2 cut(s) | 621, 1349 |
| Tsp45I | GTSAC | 3 cut(s) | 31, 167, 220 |
| TspGWI | ACGGA | 2 cut(s) | 401, 684 |
| TspRI | CASTG | 4 cut(s) | 67, 340, 432, 660 |
| VpaK11BI | GGWCC | 1 cut(s) | 1226 |
| XapI | RAATTY | 2 cut(s) | 321, 755 |
| XspI | CTAG | 1 cut(s) | 1113 |
| ZraI | GACGTC | 1 cut(s) | 31 |
| Zsp2I | ATGCAT | 1 cut(s) | 792 |