Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G28730 |
| fragaria_vesca | FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 FvH4_6g49210 |
| malus_domestica | MD09G1047500.v1.1 MD17G1047600.v1.1 |
| prunus_persica | Prupe.3G271500_v2.0.a1 Prupe.3G271500_v2.0.a1 |
| pyrus_communis | pycom111g03840 pycom17g04240 |
| rosa_chinensis | RchiOBHm_Chr2g0169081 |
| rosa_laevigata | RLG00000021832 |
| rosa_multiflora | Rmu_sc0004901.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00082480 |
| rosa_rugosa | Rorug02G0536700 |
| rosa_samantha | Rh2AG608600 Rh2BG621500 Rh2CG590200 Rh2DG632100 |
| rosa_wichuraiana | Rw2G050460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 242 |
| AccB1I | GGYRCC | 1 cut(s) | 998 |
| AccIII | TCCGGA | 1 cut(s) | 819 |
| AciI | CCGC | 5 cut(s) | 279, 315, 700, 1808, 1929 |
| AclWI | GGATC | 3 cut(s) | 803, 1661, 1674 |
| AcoI | YGGCCR | 1 cut(s) | 10 |
| AcsI | RAATTY | 3 cut(s) | 729, 1022, 1163 |
| AcuI | CTGAAG | 2 cut(s) | 407, 1092 |
| AfaI | GTAC | 4 cut(s) | 737, 839, 923, 1779 |
| AgsI | TTSAA | 7 cut(s) | 22, 863, 881, 1097, 1299, 1364, 1578 |
| AhlI | ACTAGT | 1 cut(s) | 248 |
| AjiI | CACGTC | 1 cut(s) | 1768 |
| AjnI | CCWGG | 1 cut(s) | 237 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 174, 206 |
| Alw26I | GTCTC | 1 cut(s) | 1310 |
| AlwI | GGATC | 3 cut(s) | 803, 1661, 1674 |
| Aor13HI | TCCGGA | 1 cut(s) | 819 |
| AoxI | GGCC | 2 cut(s) | 10, 40 |
| ApeKI | GCWGC | 2 cut(s) | 64, 301 |
| ApoI | RAATTY | 3 cut(s) | 729, 1022, 1163 |
| AspA2I | CCTAGG | 1 cut(s) | 659 |
| AspLEI | GCGC | 1 cut(s) | 1181 |
| AspS9I | GGNCC | 1 cut(s) | 166 |
| AsuC2I | CCSGG | 3 cut(s) | 60, 1017, 1749 |
| AsuHPI | GGTGA | 5 cut(s) | 554, 626, 964, 1436, 1637 |
| AsuII | TTCGAA | 1 cut(s) | 1249 |
| AvaII | GGWCC | 1 cut(s) | 166 |
| AvrII | CCTAGG | 1 cut(s) | 659 |
| BamHI | GGATCC | 1 cut(s) | 1666 |
| BanI | GGYRCC | 1 cut(s) | 998 |
| BbvI | GCAGC | 2 cut(s) | 76, 313 |
| BccI | CCATC | 7 cut(s) | 490, 1034, 1070, 1337, 1466, 1613, 1625 |
| BceAI | ACGGC | 3 cut(s) | 25, 27, 1034 |
| BciT130I | CCWGG | 1 cut(s) | 239 |
| BclI | TGATCA | 2 cut(s) | 1144, 1215 |
| BcnI | CCSGG | 3 cut(s) | 60, 1017, 1749 |
| BcoDI | GTCTC | 1 cut(s) | 1310 |
| BcuI | ACTAGT | 1 cut(s) | 248 |
| BfaI | CTAG | 4 cut(s) | 249, 660, 1518, 1563 |
| BfmI | CTRYAG | 1 cut(s) | 670 |
| BfoI | RGCGCY | 1 cut(s) | 1182 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 48 |
| BisI | GCNGC | 3 cut(s) | 65, 302, 701 |
| BlnI | CCTAGG | 1 cut(s) | 659 |
| BlsI | GCNGC | 3 cut(s) | 66, 303, 702 |
| BmcAI | AGTACT | 1 cut(s) | 1779 |
| Bme1390I | CCNGG | 4 cut(s) | 60, 239, 1017, 1749 |
| Bme18I | GGWCC | 1 cut(s) | 166 |
| BmgBI | CACGTC | 1 cut(s) | 1768 |
| BmgT120I | GGNCC | 1 cut(s) | 166 |
| BmiI | GGNNCC | 6 cut(s) | 168, 1000, 1353, 1560, 1572, 1668 |
| BmrFI | CCNGG | 4 cut(s) | 60, 239, 1017, 1749 |
| BmsI | GCATC | 3 cut(s) | 610, 1369, 1504 |
| BpmI | CTGGAG | 3 cut(s) | 102, 630, 1203 |
| Bpu14I | TTCGAA | 1 cut(s) | 1249 |
| BpuEI | CTTGAG | 2 cut(s) | 549, 1292 |
| BpuMI | CCSGG | 3 cut(s) | 60, 1017, 1749 |
| BsaBI | GATNNNNATC | 1 cut(s) | 549 |
| BsaI | GGTCTC | 1 cut(s) | 1310 |
| BsaJI | CCNNGG | 6 cut(s) | 43, 59, 170, 659, 1584, 1747 |
| BsaWI | WCCGGW | 1 cut(s) | 819 |
| Bse3DI | GCAATG | 1 cut(s) | 1695 |
| Bse8I | GATNNNNATC | 1 cut(s) | 549 |
| BseAI | TCCGGA | 1 cut(s) | 819 |
| BseBI | CCWGG | 1 cut(s) | 239 |
| BseDI | CCNNGG | 6 cut(s) | 43, 59, 170, 659, 1584, 1747 |
| BseGI | GGATG | 7 cut(s) | 165, 247, 466, 1450, 1474, 1510, 1870 |
| BseJI | GATNNNNATC | 1 cut(s) | 549 |
| BseMI | GCAATG | 1 cut(s) | 1695 |
| BseMII | CTCAG | 3 cut(s) | 431, 545, 1524 |
| BseRI | GAGGAG | 3 cut(s) | 308, 1344, 1826 |
| BseXI | GCAGC | 2 cut(s) | 76, 313 |
| BshFI | GGCC | 2 cut(s) | 12, 42 |
| BshNI | GGYRCC | 1 cut(s) | 998 |
| BsiSI | CCGG | 4 cut(s) | 59, 820, 1016, 1749 |
| BslFI | GGGAC | 3 cut(s) | 152, 540, 966 |
| BsmAI | GTCTC | 1 cut(s) | 1310 |
| BsmFI | GGGAC | 3 cut(s) | 152, 540, 966 |
| BsnI | GGCC | 2 cut(s) | 12, 42 |
| Bso31I | GGTCTC | 1 cut(s) | 1310 |
| Bsp119I | TTCGAA | 1 cut(s) | 1249 |
| Bsp13I | TCCGGA | 1 cut(s) | 819 |
| Bsp143I | GATC | 6 cut(s) | 808, 1144, 1207, 1215, 1311, 1666 |
| BspACI | CCGC | 5 cut(s) | 279, 315, 700, 1808, 1929 |
| BspANI | GGCC | 2 cut(s) | 12, 42 |
| BspCNI | CTCAG | 3 cut(s) | 430, 544, 1525 |
| BspEI | TCCGGA | 1 cut(s) | 819 |
| BspHI | TCATGA | 3 cut(s) | 961, 1141, 1314 |
| BspLI | GGNNCC | 6 cut(s) | 168, 1000, 1353, 1560, 1572, 1668 |
| BspPI | GGATC | 3 cut(s) | 803, 1661, 1674 |
| BspT104I | TTCGAA | 1 cut(s) | 1249 |
| BspT107I | GGYRCC | 1 cut(s) | 998 |
| BspTNI | GGTCTC | 1 cut(s) | 1310 |
| BsrDI | GCAATG | 1 cut(s) | 1695 |
| BssECI | CCNNGG | 6 cut(s) | 43, 59, 170, 659, 1584, 1747 |
| BssMI | GATC | 6 cut(s) | 808, 1144, 1207, 1215, 1311, 1666 |
| BssT1I | CCWWGG | 3 cut(s) | 170, 659, 1584 |
| Bst2UI | CCWGG | 1 cut(s) | 239 |
| Bst4CI | ACNGT | 2 cut(s) | 674, 756 |
| Bst6I | CTCTTC | 4 cut(s) | 23, 1359, 1362, 1434 |
| BstBI | TTCGAA | 1 cut(s) | 1249 |
| BstC8I | GCNNGC | 3 cut(s) | 381, 887, 1548 |
| BstDEI | CTNAG | 7 cut(s) | 375, 417, 445, 531, 768, 1321, 1533 |
| BstDSI | CCRYGG | 1 cut(s) | 43 |
| BstF5I | GGATG | 7 cut(s) | 165, 247, 466, 1450, 1474, 1510, 1870 |
| BstH2I | RGCGCY | 1 cut(s) | 1182 |
| BstHHI | GCGC | 1 cut(s) | 1181 |
| BstKTI | GATC | 6 cut(s) | 811, 1147, 1210, 1218, 1314, 1669 |
| BstMAI | GTCTC | 1 cut(s) | 1310 |
| BstMBI | GATC | 6 cut(s) | 808, 1144, 1207, 1215, 1311, 1666 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 48, 1185 |
| BstNI | CCWGG | 1 cut(s) | 239 |
| BstNSI | RCATGY | 2 cut(s) | 279, 355 |
| BstSCI | CCNGG | 4 cut(s) | 58, 237, 1015, 1747 |
| BstSFI | CTRYAG | 1 cut(s) | 670 |
| BstV1I | GCAGC | 2 cut(s) | 76, 313 |
| BstX2I | RGATCY | 1 cut(s) | 1666 |
| BstYI | RGATCY | 1 cut(s) | 1666 |
| BsuRI | GGCC | 2 cut(s) | 12, 42 |
| BtgI | CCRYGG | 1 cut(s) | 43 |
| BtrI | CACGTC | 1 cut(s) | 1768 |
| BtsCI | GGATG | 7 cut(s) | 165, 247, 466, 1450, 1474, 1510, 1870 |
| BtsI | GCAGTG | 1 cut(s) | 748 |
| BtsIMutI | CAGTG | 2 cut(s) | 679, 748 |
| Cac8I | GCNNGC | 3 cut(s) | 381, 887, 1548 |
| CciI | TCATGA | 3 cut(s) | 961, 1141, 1314 |
| CfoI | GCGC | 1 cut(s) | 1181 |
| Cfr13I | GGNCC | 1 cut(s) | 166 |
| Csp6I | GTAC | 4 cut(s) | 736, 838, 922, 1778 |
| CviQI | GTAC | 4 cut(s) | 736, 838, 922, 1778 |
| DdeI | CTNAG | 7 cut(s) | 375, 417, 445, 531, 768, 1321, 1533 |
| DpnI | GATC | 6 cut(s) | 810, 1146, 1209, 1217, 1313, 1668 |
| DpnII | GATC | 6 cut(s) | 808, 1144, 1207, 1215, 1311, 1666 |
| DraI | TTTAAA | 1 cut(s) | 727 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 242 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 242 |
| EaeI | YGGCCR | 1 cut(s) | 10 |
| Eam1104I | CTCTTC | 4 cut(s) | 23, 1359, 1362, 1434 |
| EarI | CTCTTC | 4 cut(s) | 23, 1359, 1362, 1434 |
| Eco130I | CCWWGG | 3 cut(s) | 170, 659, 1584 |
| Eco31I | GGTCTC | 1 cut(s) | 1310 |
| Eco47I | GGWCC | 1 cut(s) | 166 |
| Eco57I | CTGAAG | 2 cut(s) | 407, 1092 |
| EcoO109I | RGGNCCY | 1 cut(s) | 166 |
| EcoRII | CCWGG | 1 cut(s) | 237 |
| EcoT14I | CCWWGG | 3 cut(s) | 170, 659, 1584 |
| ErhI | CCWWGG | 3 cut(s) | 170, 659, 1584 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1091, 1123, 1227, 1259 |
| FaqI | GGGAC | 3 cut(s) | 152, 540, 966 |
| FauI | CCCGC | 1 cut(s) | 1922 |
| FbaI | TGATCA | 2 cut(s) | 1144, 1215 |
| Fnu4HI | GCNGC | 3 cut(s) | 65, 302, 701 |
| FokI | GGATG | 7 cut(s) | 172, 254, 473, 1457, 1481, 1517, 1877 |
| Fsp4HI | GCNGC | 3 cut(s) | 65, 302, 701 |
| FspBI | CTAG | 4 cut(s) | 249, 660, 1518, 1563 |
| GlaI | GCGC | 1 cut(s) | 1180 |
| GluI | GCNGC | 3 cut(s) | 65, 302, 701 |
| GsuI | CTGGAG | 3 cut(s) | 102, 630, 1203 |
| HaeII | RGCGCY | 1 cut(s) | 1182 |
| HaeIII | GGCC | 2 cut(s) | 12, 42 |
| HapII | CCGG | 4 cut(s) | 59, 820, 1016, 1749 |
| HhaI | GCGC | 1 cut(s) | 1181 |
| Hin6I | GCGC | 1 cut(s) | 1179 |
| HinP1I | GCGC | 1 cut(s) | 1179 |
| HincII | GTYRAC | 2 cut(s) | 370, 1387 |
| HindII | GTYRAC | 2 cut(s) | 370, 1387 |
| HinfI | GANTC | 7 cut(s) | 488, 550, 1221, 1493, 1508, 1907, 1919 |
| HpaII | CCGG | 4 cut(s) | 59, 820, 1016, 1749 |
| HphI | GGTGA | 5 cut(s) | 554, 626, 964, 1436, 1637 |
| Hpy166II | GTNNAC | 3 cut(s) | 370, 972, 1387 |
| Hpy188I | TCNGA | 7 cut(s) | 195, 1149, 1215, 1220, 1260, 1513, 1924 |
| Hpy8I | GTNNAC | 3 cut(s) | 370, 972, 1387 |
| HpyAV | CCTTC | 3 cut(s) | 157, 817, 1584 |
| HpyCH4III | ACNGT | 2 cut(s) | 674, 756 |
| HpyCH4IV | ACGT | 3 cut(s) | 319, 600, 1767 |
| HpyCH4V | TGCA | 7 cut(s) | 647, 856, 1198, 1550, 1637, 1676, 1757 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 48, 1185 |
| HpyF3I | CTNAG | 7 cut(s) | 375, 417, 445, 531, 768, 1321, 1533 |
| HpySE526I | ACGT | 3 cut(s) | 319, 600, 1767 |
| HspAI | GCGC | 1 cut(s) | 1179 |
| Kpn2I | TCCGGA | 1 cut(s) | 819 |
| Ksp22I | TGATCA | 2 cut(s) | 1144, 1215 |
| Kzo9I | GATC | 6 cut(s) | 808, 1144, 1207, 1215, 1311, 1666 |
| LmnI | GCTCC | 4 cut(s) | 473, 1357, 1529, 1558 |
| Lsp1109I | GCAGC | 2 cut(s) | 76, 313 |
| LweI | GCATC | 3 cut(s) | 610, 1369, 1504 |
| MaeI | CTAG | 4 cut(s) | 249, 660, 1518, 1563 |
| MaeII | ACGT | 3 cut(s) | 319, 600, 1767 |
| MaeIII | GTNAC | 7 cut(s) | 233, 244, 575, 628, 799, 1006, 1742 |
| MalI | GATC | 6 cut(s) | 810, 1146, 1209, 1217, 1313, 1668 |
| MboI | GATC | 6 cut(s) | 808, 1144, 1207, 1215, 1311, 1666 |
| MflI | RGATCY | 1 cut(s) | 1666 |
| MluCI | AATT | 8 cut(s) | 322, 729, 957, 1022, 1163, 1752, 1850, 1869 |
| MlyI | GAGTC | 1 cut(s) | 1215 |
| MmeI | TCCRAC | 1 cut(s) | 549 |
| MroI | TCCGGA | 1 cut(s) | 819 |
| MseI | TTAA | 5 cut(s) | 198, 284, 341, 726, 1064 |
| MslI | CAYNNNNRTG | 2 cut(s) | 459, 590 |
| MspA1I | CMGCKG | 2 cut(s) | 1808, 1929 |
| MspI | CCGG | 4 cut(s) | 59, 820, 1016, 1749 |
| MspR9I | CCNGG | 4 cut(s) | 60, 239, 1017, 1749 |
| MvaI | CCWGG | 1 cut(s) | 239 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 48, 1185 |
| NciI | CCSGG | 3 cut(s) | 60, 1017, 1749 |
| NdeII | GATC | 6 cut(s) | 808, 1144, 1207, 1215, 1311, 1666 |
| NlaIV | GGNNCC | 6 cut(s) | 168, 1000, 1353, 1560, 1572, 1668 |
| NmuCI | GTSAC | 4 cut(s) | 233, 244, 575, 628 |
| NspI | RCATGY | 2 cut(s) | 279, 355 |
| NspV | TTCGAA | 1 cut(s) | 1249 |
| PagI | TCATGA | 3 cut(s) | 961, 1141, 1314 |
| PfeI | GAWTC | 6 cut(s) | 488, 550, 1493, 1508, 1907, 1919 |
| PkrI | GCNGC | 3 cut(s) | 66, 303, 702 |
| PleI | GAGTC | 1 cut(s) | 1215 |
| PpsI | GAGTC | 1 cut(s) | 1215 |
| PpuMI | RGGWCCY | 1 cut(s) | 166 |
| Psp5II | RGGWCCY | 1 cut(s) | 166 |
| Psp6I | CCWGG | 1 cut(s) | 237 |
| PspGI | CCWGG | 1 cut(s) | 237 |
| PspN4I | GGNNCC | 6 cut(s) | 168, 1000, 1353, 1560, 1572, 1668 |
| PspPI | GGNCC | 1 cut(s) | 166 |
| PspPPI | RGGWCCY | 1 cut(s) | 166 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 905, 937 |
| PsuI | RGATCY | 1 cut(s) | 1666 |
| RsaI | GTAC | 4 cut(s) | 737, 839, 923, 1779 |
| RsaNI | GTAC | 4 cut(s) | 736, 838, 922, 1778 |
| RseI | CAYNNNNRTG | 2 cut(s) | 459, 590 |
| SaqAI | TTAA | 5 cut(s) | 198, 284, 341, 726, 1064 |
| SatI | GCNGC | 3 cut(s) | 65, 302, 701 |
| Sau3AI | GATC | 6 cut(s) | 808, 1144, 1207, 1215, 1311, 1666 |
| Sau96I | GGNCC | 1 cut(s) | 166 |
| ScaI | AGTACT | 1 cut(s) | 1779 |
| SchI | GAGTC | 1 cut(s) | 1215 |
| ScrFI | CCNGG | 4 cut(s) | 60, 239, 1017, 1749 |
| SfaNI | GCATC | 3 cut(s) | 610, 1369, 1504 |
| SfcI | CTRYAG | 1 cut(s) | 670 |
| SfuI | TTCGAA | 1 cut(s) | 1249 |
| SinI | GGWCC | 1 cut(s) | 166 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 459, 590 |
| SmlI | CTYRAG | 2 cut(s) | 564, 1307 |
| SmoI | CTYRAG | 2 cut(s) | 564, 1307 |
| SpeI | ACTAGT | 1 cut(s) | 248 |
| Sse9I | AATT | 8 cut(s) | 322, 729, 957, 1022, 1163, 1752, 1850, 1869 |
| SsiI | CCGC | 5 cut(s) | 279, 315, 700, 1808, 1929 |
| SspI | AATATT | 1 cut(s) | 981 |
| SspMI | CTAG | 4 cut(s) | 249, 660, 1518, 1563 |
| StyD4I | CCNGG | 4 cut(s) | 58, 237, 1015, 1747 |
| StyI | CCWWGG | 3 cut(s) | 170, 659, 1584 |
| TaaI | ACNGT | 2 cut(s) | 674, 756 |
| TaiI | ACGT | 3 cut(s) | 322, 603, 1770 |
| TaqI | TCGA | 4 cut(s) | 336, 751, 893, 1249 |
| TasI | AATT | 8 cut(s) | 322, 729, 957, 1022, 1163, 1752, 1850, 1869 |
| TatI | WGTACW | 3 cut(s) | 735, 921, 1777 |
| TauI | GCSGC | 1 cut(s) | 703 |
| TfiI | GAWTC | 6 cut(s) | 488, 550, 1493, 1508, 1907, 1919 |
| Tru1I | TTAA | 5 cut(s) | 198, 284, 341, 726, 1064 |
| Tru9I | TTAA | 5 cut(s) | 198, 284, 341, 726, 1064 |
| TscAI | CASTG | 2 cut(s) | 679, 748 |
| TseFI | GTSAC | 4 cut(s) | 233, 244, 575, 628 |
| TseI | GCWGC | 2 cut(s) | 64, 301 |
| Tsp45I | GTSAC | 4 cut(s) | 233, 244, 575, 628 |
| TspGWI | ACGGA | 3 cut(s) | 20, 1016, 1391 |
| TspRI | CASTG | 2 cut(s) | 679, 748 |
| VpaK11BI | GGWCC | 1 cut(s) | 166 |
| XapI | RAATTY | 3 cut(s) | 729, 1022, 1163 |
| XceI | RCATGY | 2 cut(s) | 279, 355 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1340 |
| XmaJI | CCTAGG | 1 cut(s) | 659 |
| XspI | CTAG | 4 cut(s) | 249, 660, 1518, 1563 |
| ZrmI | AGTACT | 1 cut(s) | 1779 |