MD17G1088800.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
7304960 .. 7306399
1440 bp
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UTR
Exon/CDS
Intron
MD17G1088800.v1.1.491

Sequence Viewer

Length: 156 bp
ATGTTGGAGATAGTAAGTGGAAAAAAAAAAAACACTTTGAATGCGGTCCTTAACTACCAATGTTCTTTGATTGAAACTTTGGTGGCATGGGAATTATGGAAAGAAGGTAGAGGAATGGAAGTGATAGATGAATCAGTAAGGGATATGTGCGCCTGA

Protein Analysis

52

Amino Acids

5.82

Weight (kDa)

4.86

Isoelectric Point (pI)

22.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017379)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 44
AgsI TTSAA 2 cut(s) 40, 74
AspLEI GCGC 1 cut(s) 152
AspS9I GGNCC 1 cut(s) 46
AvaII GGWCC 1 cut(s) 46
Bme18I GGWCC 1 cut(s) 46
BmgT120I GGNCC 1 cut(s) 46
BsmI GAATGC 1 cut(s) 46
BspACI CCGC 1 cut(s) 44
BstHHI GCGC 1 cut(s) 152
CfoI GCGC 1 cut(s) 152
Cfr13I GGNCC 1 cut(s) 46
CviAII CATG 1 cut(s) 87
Eco47I GGWCC 1 cut(s) 46
FaeI CATG 1 cut(s) 90
FaiI YATR 3 cut(s) 88, 97, 146
FatI CATG 1 cut(s) 86
GlaI GCGC 1 cut(s) 151
HhaI GCGC 1 cut(s) 152
Hin1II CATG 1 cut(s) 90
Hin6I GCGC 1 cut(s) 150
HinP1I GCGC 1 cut(s) 150
HinfI GANTC 1 cut(s) 131
HpyAV CCTTC 1 cut(s) 98
Hsp92II CATG 1 cut(s) 90
HspAI GCGC 1 cut(s) 150
MluCI AATT 1 cut(s) 92
MnlI CCTC 1 cut(s) 104
MseI TTAA 1 cut(s) 51
Mva1269I GAATGC 1 cut(s) 46
NlaIII CATG 1 cut(s) 90
PctI GAATGC 1 cut(s) 46
PfeI GAWTC 1 cut(s) 131
PspPI GGNCC 1 cut(s) 46
SaqAI TTAA 1 cut(s) 51
Sau96I GGNCC 1 cut(s) 46
SetI ASST 1 cut(s) 109
SgeI CNNG 1 cut(s) 99
SinI GGWCC 1 cut(s) 46
Sse9I AATT 1 cut(s) 92
SsiI CCGC 1 cut(s) 44
TasI AATT 1 cut(s) 92
TfiI GAWTC 1 cut(s) 131
Tru1I TTAA 1 cut(s) 51
Tru9I TTAA 1 cut(s) 51
TspDTI ATGAA 1 cut(s) 144
VpaK11BI GGWCC 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.