pycom17g08510

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
6380625 .. 6381125
501 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g08510.1

Sequence Viewer

Length: 414 bp
ATGGATGTGTTTAGCTTTGGAGTATTACTCTTAGAGATTGTGAGCGGAAAGCGGAATTCTGCTTTTCATCGTTTTGAAGATCGGCTTACACTTGCTGGATGGGCGTGGAAGTTATGGAATGAAGGAAGAGGAATCGAGGTTATTGATGAATTGTTAAGGAAAAAGTGCCAGCTTGATGAAGCATTGAGGTGTATCCATTTTGGGTTTTTGTGTGTTCAAGAAGCTCCGGCTGATTTACCAACAATGTCTTCAGTAATTTTTATGGTACAGAGCAATGAAGCTACATCACTTCCACCCTCCAAAGAACCTGCTTTCTCAATACATAGGGGTGCCGGTGCTGTTGGTTGTTCTTCTCAAACACCTGCCAGTTTTTTGAACAATGAACTCACTGTTAGTTTGCCAGAAGGTCGATAG

Protein Analysis

138

Amino Acids

15.14

Weight (kDa)

5.59

Isoelectric Point (pI)

45.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017379)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 370
Acc36I ACCTGC 2 cut(s) 316, 370
AccB1I GGYRCC 1 cut(s) 329
AccBSI CCGCTC 1 cut(s) 45
AciI CCGC 2 cut(s) 45, 52
AcsI RAATTY 1 cut(s) 55
AcuI CTGAAG 1 cut(s) 234
AfaI GTAC 1 cut(s) 267
AgsI TTSAA 3 cut(s) 77, 218, 376
AjuI GAANNNNNNNTTGG 2 cut(s) 232, 264
AluBI AGCT 4 cut(s) 15, 172, 224, 281
AluI AGCT 4 cut(s) 15, 172, 224, 281
ApoI RAATTY 1 cut(s) 55
BanI GGYRCC 1 cut(s) 329
BbsI GAAGAC 1 cut(s) 240
BccI CCATC 1 cut(s) 93
BciVI GTATCC 1 cut(s) 203
BfuAI ACCTGC 2 cut(s) 316, 370
BfuI GTATCC 1 cut(s) 203
BmiI GGNNCC 1 cut(s) 331
BpiI GAAGAC 1 cut(s) 240
BplI GAGNNNNNCTC 2 cut(s) 12, 44
Bse118I RCCGGY 1 cut(s) 332
Bse1I ACTGG 1 cut(s) 366
Bse3DI GCAATG 1 cut(s) 280
BseGI GGATG 2 cut(s) 10, 104
BseMI GCAATG 1 cut(s) 280
BseNI ACTGG 1 cut(s) 366
BshNI GGYRCC 1 cut(s) 329
BsiSI CCGG 2 cut(s) 227, 333
Bsp143I GATC 1 cut(s) 79
BspACI CCGC 2 cut(s) 45, 52
BspLI GGNNCC 1 cut(s) 331
BspMI ACCTGC 2 cut(s) 316, 370
BspT107I GGYRCC 1 cut(s) 329
BsrBI CCGCTC 1 cut(s) 45
BsrDI GCAATG 1 cut(s) 280
BsrFI RCCGGY 1 cut(s) 332
BsrI ACTGG 1 cut(s) 366
BssAI RCCGGY 1 cut(s) 332
BssMI GATC 1 cut(s) 79
Bst4CI ACNGT 1 cut(s) 391
Bst6I CTCTTC 1 cut(s) 121
BstC8I GCNNGC 1 cut(s) 170
BstDEI CTNAG 1 cut(s) 31
BstF5I GGATG 2 cut(s) 10, 104
BstKTI GATC 1 cut(s) 82
BstMBI GATC 1 cut(s) 79
BstMWI GCNNNNNNNGC 1 cut(s) 101
BstV2I GAAGAC 1 cut(s) 240
BsuI GTATCC 1 cut(s) 203
BtsCI GGATG 2 cut(s) 10, 104
BtsIMutI CAGTG 1 cut(s) 387
BveI ACCTGC 2 cut(s) 316, 370
Cac8I GCNNGC 1 cut(s) 170
Cfr10I RCCGGY 1 cut(s) 332
Csp6I GTAC 1 cut(s) 266
CviJI RGCY 6 cut(s) 15, 85, 172, 224, 230, 281
CviKI_1 RGCY 6 cut(s) 15, 85, 172, 224, 230, 281
CviQI GTAC 1 cut(s) 266
DdeI CTNAG 1 cut(s) 31
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
Eam1104I CTCTTC 1 cut(s) 121
EarI CTCTTC 1 cut(s) 121
Eco57I CTGAAG 1 cut(s) 234
EcoRI GAATTC 1 cut(s) 55
FaiI YATR 3 cut(s) 115, 263, 324
FalI AAGNNNNNCTT 2 cut(s) 69, 101
FokI GGATG 2 cut(s) 17, 111
HapII CCGG 2 cut(s) 227, 333
HinfI GANTC 1 cut(s) 132
HpaII CCGG 2 cut(s) 227, 333
Hpy188III TCNNGA 1 cut(s) 218
HpyAV CCTTC 2 cut(s) 116, 398
HpyCH4III ACNGT 1 cut(s) 391
HpyF10VI GCNNNNNNNGC 1 cut(s) 101
HpyF3I CTNAG 1 cut(s) 31
Kzo9I GATC 1 cut(s) 79
LmnI GCTCC 1 cut(s) 229
LpnPI CCDG 7 cut(s) 81, 182, 240, 321, 346, 375, 379
MalI GATC 1 cut(s) 81
MbiI CCGCTC 1 cut(s) 45
MboI GATC 1 cut(s) 79
MboII GAAGA 4 cut(s) 89, 138, 240, 342
MluCI AATT 3 cut(s) 55, 149, 255
MnlI CCTC 4 cut(s) 122, 130, 180, 307
MseI TTAA 1 cut(s) 155
MslI CAYNNNNRTG 2 cut(s) 187, 327
MspI CCGG 2 cut(s) 227, 333
MwoI GCNNNNNNNGC 1 cut(s) 101
NdeII GATC 1 cut(s) 79
NlaIV GGNNCC 1 cut(s) 331
PaqCI CACCTGC 1 cut(s) 370
PfeI GAWTC 1 cut(s) 132
PspN4I GGNNCC 1 cut(s) 331
RsaI GTAC 1 cut(s) 267
RsaNI GTAC 1 cut(s) 266
RseI CAYNNNNRTG 2 cut(s) 187, 327
SaqAI TTAA 1 cut(s) 155
Sau3AI GATC 1 cut(s) 79
SetI ASST 9 cut(s) 17, 141, 174, 191, 226, 283, 310, 364, 409
SmiMI CAYNNNNRTG 2 cut(s) 187, 327
Sse9I AATT 3 cut(s) 55, 149, 255
SsiI CCGC 2 cut(s) 45, 52
TaaI ACNGT 1 cut(s) 391
TaqI TCGA 2 cut(s) 135, 409
TasI AATT 3 cut(s) 55, 149, 255
TfiI GAWTC 1 cut(s) 132
Tru1I TTAA 1 cut(s) 155
Tru9I TTAA 1 cut(s) 155
TscAI CASTG 1 cut(s) 394
TspDTI ATGAA 6 cut(s) 56, 135, 162, 192, 291, 396
TspRI CASTG 1 cut(s) 394
XapI RAATTY 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.