MD17G1138500.v1.1

N-acylneuraminate-9-phosphatase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
12438005 .. 12441896
3892 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1138500.v1.1.491

Sequence Viewer

Length: 1233 bp
ATGCAAGTTGATGCTTGCTGGGAGGATGACGATGATGTTACTGTAGCAGATGTCGCAGCTCCTTACTGGGAACGGCCAGTAGGTCCTACATGGTGGTGTCATGTAGATGCCGGCCATCCATACATCAATTCGTGGCTGAGTACTGCTCAATGGTTACACCCGGCTGTCAGTATTGCTTTGCGAGATGATGGTAAGCTGATAAGCGAGCGAATGAAGCACCTCCTGTATGAGGTTCCTGTAAGGGTTGCTTGTGGCCTAATATTTGAGCTCCTAGGCCAGTCAGCAGGTGATCCACTTGTTAATGAAGATGACATTCCCGTTGTCTTACGATCATGGCAGTCACAGAATTTCCTCGTAACAGCATTGCATGTTAAAGGTTCTGCACAAAATGTTAATGTCCTAGGAATATCAGAAGTCCAGGAACTGCTTGCTACTGAGGGCATTAGCATGCCATGGAATATTCACGAAGTCATAGCACATTTAGCTTGTCGCCTTGCATGTTGGGATGATAGATTATATCGCAAATTCATATTTGGGGCTGCAGATGAAGTTGAGCTGAAGTTTATGAACAGGAGAACTCATGAAGATGTGTATCTATTCAGTATAATATTGAACCAAGAAATCCGATGGTTATCAACCCAGGTTATTAGGGTGAAGTGGTCACTCCATGCAAGAAAGGAGATCATGTTCGAGCTTCTTTACCACTTGAGAGGGGACACCACAAAGGGATTGCTGGAAGGAGTTAGAAAGAGTACAAGGGAAATGATTCAAGAGCAAGAAGTTGTTCGCGGTCGCTTATTTACTATTCAAGATGTGATGCAGAGCACTGTTCGCGCATGGTTGCAGGCAAGGAAGAAAATATCGGTAATATCGGAAATATCGGTAGTCCGAAAACACGGAAATATCGATGGAAATATCGGGATAATATCGATATCGATAAAAATTACATGGAAACCACGGAAATTGATCACCATATGCATTTGCTCTGTTTCAGCCATTCTGGTCTTGTTAGGGGTTGTGCTGATTGGAATTGGATTGGTTTGCCTTGGCTTGAAGAAACCTATTGTTGAAAAAGATGTCGAAGTTAGAAAACTCGAGCTCCAAGAGCTCGTTAAGATGTTTCAGCAAAAAGCAGAGTCACATGTGCAGGTTCGAAGAACTGTTCCTAGAACCAACCCAACTGTTGCAGGTAGATTCCCGGAAAGTGCTGCAAGTTATGTTCTCATCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

411

Amino Acids

46.56

Weight (kDa)

7.64

Isoelectric Point (pI)

38.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 275
Acc36I ACCTGC 3 cut(s) 275, 1138, 1178
AccII CGCG 2 cut(s) 789, 834
AciI CCGC 1 cut(s) 789
AclWI GGATC 1 cut(s) 284
AcoI YGGCCR 2 cut(s) 74, 112
AcsI RAATTY 2 cut(s) 346, 524
AcuI CTGAAG 1 cut(s) 578
AfaI GTAC 2 cut(s) 142, 754
AfiI CCNNNNNNNGG 1 cut(s) 229
AflIII ACRYGT 1 cut(s) 1141
AgsI TTSAA 5 cut(s) 613, 770, 809, 1054, 1070
AjnI CCWGG 2 cut(s) 417, 639
AloI GAACNNNNNNTCC 2 cut(s) 671, 703
AluBI AGCT 9 cut(s) 59, 196, 268, 485, 556, 694, 1099, 1108, 1230
AluI AGCT 9 cut(s) 59, 196, 268, 485, 556, 694, 1099, 1108, 1230
Alw21I GWGCWC 4 cut(s) 270, 827, 1101, 1110
AlwI GGATC 1 cut(s) 284
AlwNI CAGNNNCTG 1 cut(s) 424
Ama87I CYCGRG 1 cut(s) 1094
AoxI GGCC 4 cut(s) 74, 112, 253, 274
ApeKI GCWGC 3 cut(s) 56, 539, 1208
ApoI RAATTY 2 cut(s) 346, 524
Asp700I GAANNNNTTC 2 cut(s) 765, 783
AspA2I CCTAGG 2 cut(s) 271, 400
AspLEI GCGC 1 cut(s) 836
AspS9I GGNCC 1 cut(s) 83
AsuC2I CCSGG 2 cut(s) 161, 1199
AsuHPI GGTGA 3 cut(s) 299, 664, 961
AsuII TTCGAA 1 cut(s) 1153
AvaI CYCGRG 1 cut(s) 1094
AvaII GGWCC 1 cut(s) 83
AvrII CCTAGG 2 cut(s) 271, 400
BanII GRGCYC 3 cut(s) 270, 1101, 1110
Bbv12I GWGCWC 4 cut(s) 270, 827, 1101, 1110
BbvI GCAGC 3 cut(s) 68, 526, 1195
BccI CCATC 4 cut(s) 123, 182, 621, 902
BceAI ACGGC 1 cut(s) 89
BciT130I CCWGG 2 cut(s) 419, 641
BclI TGATCA 1 cut(s) 966
BcnI CCSGG 2 cut(s) 161, 1199
BfaI CTAG 3 cut(s) 272, 401, 1167
BfmI CTRYAG 2 cut(s) 42, 540
BfuAI ACCTGC 3 cut(s) 275, 1138, 1178
BisI GCNGC 3 cut(s) 57, 540, 1209
BlnI CCTAGG 2 cut(s) 271, 400
BlsI GCNGC 3 cut(s) 58, 541, 1210
BmcAI AGTACT 1 cut(s) 142
Bme1390I CCNGG 4 cut(s) 161, 419, 641, 1199
Bme18I GGWCC 1 cut(s) 83
BmeT110I CYCGRG 1 cut(s) 1094
BmgT120I GGNCC 1 cut(s) 83
BmiI GGNNCC 1 cut(s) 234
BmrFI CCNGG 4 cut(s) 161, 419, 641, 1199
BmrI ACTGGG 1 cut(s) 76
BmsI GCATC 2 cut(s) 97, 807
BmuI ACTGGG 1 cut(s) 76
BplI GAGNNNNNCTC 2 cut(s) 130, 162
Bpu14I TTCGAA 1 cut(s) 1153
BpuEI CTTGAG 1 cut(s) 727
BpuMI CCSGG 2 cut(s) 161, 1199
Bsa29I ATCGAT 3 cut(s) 906, 929, 935
BsaBI GATNNNNATC 2 cut(s) 591, 631
BsaJI CCNNGG 6 cut(s) 271, 400, 452, 639, 956, 1045
BsaXI ACNNNNNCTCC 4 cut(s) 671, 701, 1083, 1113
Bsc4I CCNNNNNNNGG 1 cut(s) 229
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 3 cut(s) 71, 77, 277
Bse3DI GCAATG 1 cut(s) 362
Bse8I GATNNNNATC 2 cut(s) 591, 631
BseBI CCWGG 2 cut(s) 419, 641
BseCI ATCGAT 3 cut(s) 906, 929, 935
BseDI CCNNGG 6 cut(s) 271, 400, 452, 639, 956, 1045
BseGI GGATG 3 cut(s) 31, 115, 511
BseJI GATNNNNATC 2 cut(s) 591, 631
BseLI CCNNNNNNNGG 1 cut(s) 229
BseMI GCAATG 1 cut(s) 362
BseMII CTCAG 2 cut(s) 128, 426
BseNI ACTGG 3 cut(s) 71, 77, 277
BseXI GCAGC 3 cut(s) 68, 526, 1195
BseYI CCCAGC 1 cut(s) 18
BsgI GTGCAG 2 cut(s) 366, 1166
Bsh1236I CGCG 2 cut(s) 789, 834
Bsh1285I CGRYCG 1 cut(s) 793
BshFI GGCC 4 cut(s) 76, 114, 255, 276
BshVI ATCGAT 3 cut(s) 906, 929, 935
BsiEI CGRYCG 1 cut(s) 793
BsiHKAI GWGCWC 4 cut(s) 270, 827, 1101, 1110
BsiHKCI CYCGRG 1 cut(s) 1094
BsiSI CCGG 3 cut(s) 111, 161, 1199
BslFI GGGAC 1 cut(s) 728
BslI CCNNNNNNNGG 1 cut(s) 229
BsmFI GGGAC 1 cut(s) 728
BsnI GGCC 4 cut(s) 76, 114, 255, 276
BsoBI CYCGRG 1 cut(s) 1094
Bsp119I TTCGAA 1 cut(s) 1153
Bsp1286I GDGCHC 4 cut(s) 270, 827, 1101, 1110
Bsp143I GATC 4 cut(s) 289, 329, 681, 966
Bsp19I CCATGG 1 cut(s) 452
BspACI CCGC 1 cut(s) 789
BspANI GGCC 4 cut(s) 76, 114, 255, 276
BspCNI CTCAG 2 cut(s) 129, 427
BspDI ATCGAT 3 cut(s) 906, 929, 935
BspFNI CGCG 2 cut(s) 789, 834
BspHI TCATGA 1 cut(s) 580
BspLI GGNNCC 1 cut(s) 234
BspMAI CTGCAG 1 cut(s) 544
BspMI ACCTGC 3 cut(s) 275, 1138, 1178
BspPI GGATC 1 cut(s) 284
BspT104I TTCGAA 1 cut(s) 1153
BsrDI GCAATG 1 cut(s) 362
BsrFI RCCGGY 1 cut(s) 110
BsrI ACTGG 3 cut(s) 71, 77, 277
BssAI RCCGGY 1 cut(s) 110
BssECI CCNNGG 6 cut(s) 271, 400, 452, 639, 956, 1045
BssMI GATC 4 cut(s) 289, 329, 681, 966
BssT1I CCWWGG 4 cut(s) 271, 400, 452, 1045
Bst2UI CCWGG 2 cut(s) 419, 641
Bst4CI ACNGT 4 cut(s) 43, 829, 1162, 1183
BstBI TTCGAA 1 cut(s) 1153
BstC8I GCNNGC 6 cut(s) 16, 112, 206, 429, 449, 846
BstDEI CTNAG 2 cut(s) 137, 435
BstDSI CCRYGG 2 cut(s) 452, 956
BstENI CCTNNNNNAGG 1 cut(s) 227
BstF5I GGATG 3 cut(s) 31, 115, 511
BstFNI CGCG 2 cut(s) 789, 834
BstHHI GCGC 1 cut(s) 836
BstKTI GATC 4 cut(s) 292, 332, 684, 969
BstMBI GATC 4 cut(s) 289, 329, 681, 966
BstMCI CGRYCG 1 cut(s) 793
BstMWI GCNNNNNNNGC 5 cut(s) 53, 214, 482, 831, 1105
BstNI CCWGG 2 cut(s) 419, 641
BstNSI RCATGY 4 cut(s) 371, 451, 501, 1145
BstSCI CCNGG 4 cut(s) 159, 417, 639, 1197
BstSFI CTRYAG 2 cut(s) 42, 540
BstUI CGCG 2 cut(s) 789, 834
BstV1I GCAGC 3 cut(s) 68, 526, 1195
Bsu15I ATCGAT 3 cut(s) 906, 929, 935
BsuRI GGCC 4 cut(s) 76, 114, 255, 276
BsuTUI ATCGAT 3 cut(s) 906, 929, 935
BtgI CCRYGG 2 cut(s) 452, 956
BtsCI GGATG 3 cut(s) 31, 115, 511
BtsIMutI CAGTG 1 cut(s) 825
BveI ACCTGC 3 cut(s) 275, 1138, 1178
Cac8I GCNNGC 6 cut(s) 16, 112, 206, 429, 449, 846
CaiI CAGNNNCTG 1 cut(s) 424
CciI TCATGA 1 cut(s) 580
CfoI GCGC 1 cut(s) 836
Cfr10I RCCGGY 1 cut(s) 110
Cfr13I GGNCC 1 cut(s) 83
ClaI ATCGAT 3 cut(s) 906, 929, 935
Csp6I GTAC 2 cut(s) 141, 753
CspCI CAANNNNNGTGG 2 cut(s) 945, 980
CviQI GTAC 2 cut(s) 141, 753
DdeI CTNAG 2 cut(s) 137, 435
DpnI GATC 4 cut(s) 291, 331, 683, 968
DpnII GATC 4 cut(s) 289, 329, 681, 966
EaeI YGGCCR 2 cut(s) 74, 112
Ecl136II GAGCTC 3 cut(s) 268, 1099, 1108
Eco130I CCWWGG 4 cut(s) 271, 400, 452, 1045
Eco24I GRGCYC 3 cut(s) 270, 1101, 1110
Eco32I GATATC 1 cut(s) 933
Eco47I GGWCC 1 cut(s) 83
Eco53kI GAGCTC 3 cut(s) 268, 1099, 1108
Eco57I CTGAAG 1 cut(s) 578
Eco88I CYCGRG 1 cut(s) 1094
EcoICRI GAGCTC 3 cut(s) 268, 1099, 1108
EcoNI CCTNNNNNAGG 1 cut(s) 227
EcoO109I RGGNCCY 1 cut(s) 83
EcoRII CCWGG 2 cut(s) 417, 639
EcoRV GATATC 1 cut(s) 933
EcoT14I CCWWGG 4 cut(s) 271, 400, 452, 1045
EcoT22I ATGCAT 1 cut(s) 980
EcoT38I GRGCYC 3 cut(s) 270, 1101, 1110
ErhI CCWWGG 4 cut(s) 271, 400, 452, 1045
FalI AAGNNNNNCTT 2 cut(s) 232, 264
FaqI GGGAC 1 cut(s) 728
FauNDI CATATG 1 cut(s) 974
FbaI TGATCA 1 cut(s) 966
Fnu4HI GCNGC 3 cut(s) 57, 540, 1209
FokI GGATG 3 cut(s) 38, 102, 518
FriOI GRGCYC 3 cut(s) 270, 1101, 1110
Fsp4HI GCNGC 3 cut(s) 57, 540, 1209
FspBI CTAG 3 cut(s) 272, 401, 1167
GlaI GCGC 1 cut(s) 835
GluI GCNGC 3 cut(s) 57, 540, 1209
GsaI CCCAGC 1 cut(s) 22
HaeIII GGCC 4 cut(s) 76, 114, 255, 276
HapII CCGG 3 cut(s) 111, 161, 1199
HhaI GCGC 1 cut(s) 836
Hin6I GCGC 1 cut(s) 834
HinP1I GCGC 1 cut(s) 834
HinfI GANTC 3 cut(s) 766, 1136, 1194
HpaII CCGG 3 cut(s) 111, 161, 1199
HphI GGTGA 3 cut(s) 299, 664, 961
Hpy188I TCNGA 4 cut(s) 412, 626, 874, 890
Hpy188III TCNNGA 5 cut(s) 464, 581, 770, 809, 919
HpyAV CCTTC 1 cut(s) 731
HpyCH4III ACNGT 4 cut(s) 43, 829, 1162, 1183
HpyF10VI GCNNNNNNNGC 5 cut(s) 53, 214, 482, 831, 1105
HpyF3I CTNAG 2 cut(s) 137, 435
HspAI GCGC 1 cut(s) 834
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
Ksp22I TGATCA 1 cut(s) 966
Kzo9I GATC 4 cut(s) 289, 329, 681, 966
LmnI GCTCC 3 cut(s) 64, 273, 1104
Lsp1109I GCAGC 3 cut(s) 68, 526, 1195
LweI GCATC 2 cut(s) 97, 807
MaeI CTAG 3 cut(s) 272, 401, 1167
MaeIII GTNAC 6 cut(s) 37, 153, 339, 355, 660, 1137
MalI GATC 4 cut(s) 291, 331, 683, 968
MboI GATC 4 cut(s) 289, 329, 681, 966
MboII GAAGA 5 cut(s) 317, 596, 865, 1066, 1167
MhlI GDGCHC 4 cut(s) 270, 827, 1101, 1110
MluCI AATT 6 cut(s) 127, 346, 524, 942, 962, 1029
MlyI GAGTC 1 cut(s) 1145
MnlI CCTC 6 cut(s) 16, 223, 230, 362, 430, 704
Mph1103I ATGCAT 1 cut(s) 980
MroNI GCCGGC 1 cut(s) 110
MroXI GAANNNNTTC 2 cut(s) 765, 783
MseI TTAA 4 cut(s) 300, 372, 393, 1113
MslI CAYNNNNRTG 4 cut(s) 94, 105, 446, 585
MspA1I CMGCKG 1 cut(s) 1230
MspI CCGG 3 cut(s) 111, 161, 1199
MspR9I CCNGG 4 cut(s) 161, 419, 641, 1199
MvaI CCWGG 2 cut(s) 419, 641
MvnI CGCG 2 cut(s) 789, 834
MwoI GCNNNNNNNGC 5 cut(s) 53, 214, 482, 831, 1105
NaeI GCCGGC 1 cut(s) 112
NciI CCSGG 2 cut(s) 161, 1199
NcoI CCATGG 1 cut(s) 452
NdeI CATATG 1 cut(s) 974
NdeII GATC 4 cut(s) 289, 329, 681, 966
NgoMIV GCCGGC 1 cut(s) 110
NlaIV GGNNCC 1 cut(s) 234
NmuCI GTSAC 3 cut(s) 339, 660, 1137
NsiI ATGCAT 1 cut(s) 980
NspI RCATGY 4 cut(s) 371, 451, 501, 1145
NspV TTCGAA 1 cut(s) 1153
PaeI GCATGC 1 cut(s) 451
PaeR7I CTCGAG 1 cut(s) 1094
PagI TCATGA 1 cut(s) 580
PaqCI CACCTGC 1 cut(s) 275
PciI ACATGT 1 cut(s) 1141
PcsI WCGNNNNNNNCGW 1 cut(s) 903
PdiI GCCGGC 1 cut(s) 112
PdmI GAANNNNTTC 2 cut(s) 765, 783
PfeI GAWTC 2 cut(s) 766, 1194
PfoI TCCNGGA 2 cut(s) 417, 1197
PkrI GCNGC 3 cut(s) 58, 541, 1210
PleI GAGTC 1 cut(s) 1144
PpsI GAGTC 1 cut(s) 1144
PpuMI RGGWCCY 1 cut(s) 83
PscI ACATGT 1 cut(s) 1141
Psp124BI GAGCTC 3 cut(s) 270, 1101, 1110
Psp5II RGGWCCY 1 cut(s) 83
Psp6I CCWGG 2 cut(s) 417, 639
PspFI CCCAGC 1 cut(s) 18
PspGI CCWGG 2 cut(s) 417, 639
PspN4I GGNNCC 1 cut(s) 234
PspPI GGNCC 1 cut(s) 83
PspPPI RGGWCCY 1 cut(s) 83
PspXI VCTCGAGB 1 cut(s) 1094
PstI CTGCAG 1 cut(s) 544
PstNI CAGNNNCTG 1 cut(s) 424
PvuII CAGCTG 1 cut(s) 1230
RsaI GTAC 2 cut(s) 142, 754
RsaNI GTAC 2 cut(s) 141, 753
RseI CAYNNNNRTG 4 cut(s) 94, 105, 446, 585
SacI GAGCTC 3 cut(s) 270, 1101, 1110
SaqAI TTAA 4 cut(s) 300, 372, 393, 1113
SatI GCNGC 3 cut(s) 57, 540, 1209
Sau3AI GATC 4 cut(s) 289, 329, 681, 966
Sau96I GGNCC 1 cut(s) 83
ScaI AGTACT 1 cut(s) 142
SchI GAGTC 1 cut(s) 1145
ScrFI CCNGG 4 cut(s) 161, 419, 641, 1199
SduI GDGCHC 4 cut(s) 270, 827, 1101, 1110
SfaNI GCATC 2 cut(s) 97, 807
SfcI CTRYAG 2 cut(s) 42, 540
Sfr274I CTCGAG 1 cut(s) 1094
SfuI TTCGAA 1 cut(s) 1153
SinI GGWCC 1 cut(s) 83
SlaI CTCGAG 1 cut(s) 1094
SmiMI CAYNNNNRTG 4 cut(s) 94, 105, 446, 585
SmlI CTYRAG 2 cut(s) 706, 1094
SmoI CTYRAG 2 cut(s) 706, 1094
SphI GCATGC 1 cut(s) 451
Sse9I AATT 6 cut(s) 127, 346, 524, 942, 962, 1029
SsiI CCGC 1 cut(s) 789
SspI AATATT 3 cut(s) 261, 460, 609
SspMI CTAG 3 cut(s) 272, 401, 1167
SstI GAGCTC 3 cut(s) 270, 1101, 1110
StyD4I CCNGG 4 cut(s) 159, 417, 639, 1197
StyI CCWWGG 4 cut(s) 271, 400, 452, 1045
TaaI ACNGT 4 cut(s) 43, 829, 1162, 1183
TaqI TCGA 7 cut(s) 690, 906, 929, 935, 1080, 1095, 1153
TasI AATT 6 cut(s) 127, 346, 524, 942, 962, 1029
TatI WGTACW 2 cut(s) 140, 752
TfiI GAWTC 2 cut(s) 766, 1194
Tru1I TTAA 4 cut(s) 300, 372, 393, 1113
Tru9I TTAA 4 cut(s) 300, 372, 393, 1113
TscAI CASTG 1 cut(s) 832
TseFI GTSAC 3 cut(s) 339, 660, 1137
TseI GCWGC 3 cut(s) 56, 539, 1208
Tsp45I GTSAC 3 cut(s) 339, 660, 1137
TspDTI ATGAA 6 cut(s) 227, 318, 517, 561, 581, 597
TspGWI ACGGA 2 cut(s) 912, 973
TspRI CASTG 1 cut(s) 832
VpaK11BI GGWCC 1 cut(s) 83
XagI CCTNNNNNAGG 1 cut(s) 227
XapI RAATTY 2 cut(s) 346, 524
XceI RCATGY 4 cut(s) 371, 451, 501, 1145
XhoI CTCGAG 1 cut(s) 1094
XmaJI CCTAGG 2 cut(s) 271, 400
XmnI GAANNNNTTC 2 cut(s) 765, 783
XspI CTAG 3 cut(s) 272, 401, 1167
ZrmI AGTACT 1 cut(s) 142
Zsp2I ATGCAT 1 cut(s) 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.