Rorug02G0427600

CorA-like Mg2+ transporter protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
54843158 .. 54845805
2648 bp
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UTR
Exon/CDS
Intron
Rorug02G0427600.1

Sequence Viewer

Length: 183 bp
ATGAGGCCTTCAAAAGATACTGAAATGCAGAAACAGATCCACAAGAAACTTGGCTACAATGCTACATGCATAGTTGATCTCTTGATGAAACATATGGCACTGAGCTGCATAGTCTCCCTAACCAGTTGCAAACAGCAGGTAGCCTACCTGGGAGCTTTAATTATATGGTGGGGGAATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

60

Amino Acids

6.81

Weight (kDa)

9.22

Isoelectric Point (pI)

30.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 127
AclWI GGATC 1 cut(s) 31
AgsI TTSAA 1 cut(s) 12
AjnI CCWGG 1 cut(s) 147
AluBI AGCT 2 cut(s) 105, 155
AluI AGCT 2 cut(s) 105, 155
Alw26I GTCTC 1 cut(s) 118
AlwI GGATC 1 cut(s) 31
AoxI GGCC 1 cut(s) 5
ApeKI GCWGC 1 cut(s) 105
BbvI GCAGC 1 cut(s) 92
BciT130I CCWGG 1 cut(s) 149
BcoDI GTCTC 1 cut(s) 118
BfuAI ACCTGC 1 cut(s) 127
BisI GCNGC 1 cut(s) 106
BlsI GCNGC 1 cut(s) 107
Bme1390I CCNGG 1 cut(s) 149
BmrFI CCNGG 1 cut(s) 149
BsaJI CCNNGG 1 cut(s) 148
Bse1I ACTGG 1 cut(s) 123
BseBI CCWGG 1 cut(s) 149
BseDI CCNNGG 1 cut(s) 148
BseMII CTCAG 1 cut(s) 92
BseNI ACTGG 1 cut(s) 123
BseXI GCAGC 1 cut(s) 92
BshFI GGCC 1 cut(s) 7
BsmAI GTCTC 1 cut(s) 118
BsnI GGCC 1 cut(s) 7
Bsp143I GATC 2 cut(s) 36, 76
BspANI GGCC 1 cut(s) 7
BspCNI CTCAG 1 cut(s) 93
BspMI ACCTGC 1 cut(s) 127
BspPI GGATC 1 cut(s) 31
BsrI ACTGG 1 cut(s) 123
BssECI CCNNGG 1 cut(s) 148
BssMI GATC 2 cut(s) 36, 76
Bst2UI CCWGG 1 cut(s) 149
BstDEI CTNAG 1 cut(s) 101
BstKTI GATC 2 cut(s) 39, 79
BstMAI GTCTC 1 cut(s) 118
BstMBI GATC 2 cut(s) 36, 76
BstNI CCWGG 1 cut(s) 149
BstNSI RCATGY 1 cut(s) 69
BstSCI CCNGG 1 cut(s) 147
BstV1I GCAGC 1 cut(s) 92
BstX2I RGATCY 1 cut(s) 36
BstYI RGATCY 1 cut(s) 36
BsuRI GGCC 1 cut(s) 7
BtsIMutI CAGTG 1 cut(s) 98
BveI ACCTGC 1 cut(s) 127
CviAII CATG 1 cut(s) 66
CviJI RGCY 5 cut(s) 7, 54, 105, 143, 155
CviKI_1 RGCY 5 cut(s) 7, 54, 105, 143, 155
DdeI CTNAG 1 cut(s) 101
DpnI GATC 2 cut(s) 38, 78
DpnII GATC 2 cut(s) 36, 76
Eco147I AGGCCT 1 cut(s) 7
EcoRII CCWGG 1 cut(s) 147
EcoT22I ATGCAT 1 cut(s) 71
FaeI CATG 1 cut(s) 69
FaiI YATR 7 cut(s) 67, 71, 93, 95, 110, 164, 166
FatI CATG 1 cut(s) 65
FauNDI CATATG 1 cut(s) 93
Fnu4HI GCNGC 1 cut(s) 106
Fsp4HI GCNGC 1 cut(s) 106
GluI GCNGC 1 cut(s) 106
HaeIII GGCC 1 cut(s) 7
Hin1II CATG 1 cut(s) 69
Hpy188III TCNNGA 1 cut(s) 82
HpyAV CCTTC 1 cut(s) 18
HpyCH4V TGCA 4 cut(s) 28, 69, 108, 129
HpyF3I CTNAG 1 cut(s) 101
Hsp92II CATG 1 cut(s) 69
Kzo9I GATC 2 cut(s) 36, 76
LmnI GCTCC 1 cut(s) 152
LpnPI CCDG 4 cut(s) 122, 134, 136, 161
Lsp1109I GCAGC 1 cut(s) 92
MalI GATC 2 cut(s) 38, 78
MboI GATC 2 cut(s) 36, 76
MflI RGATCY 1 cut(s) 36
MluCI AATT 1 cut(s) 159
Mph1103I ATGCAT 1 cut(s) 71
MseI TTAA 1 cut(s) 158
MspR9I CCNGG 1 cut(s) 149
MvaI CCWGG 1 cut(s) 149
NdeI CATATG 1 cut(s) 93
NdeII GATC 2 cut(s) 36, 76
NlaIII CATG 1 cut(s) 69
NsiI ATGCAT 1 cut(s) 71
NspI RCATGY 1 cut(s) 69
PceI AGGCCT 1 cut(s) 7
PkrI GCNGC 1 cut(s) 107
Psp6I CCWGG 1 cut(s) 147
PspGI CCWGG 1 cut(s) 147
PsuI RGATCY 1 cut(s) 36
SaqAI TTAA 1 cut(s) 158
SatI GCNGC 1 cut(s) 106
Sau3AI GATC 2 cut(s) 36, 76
ScrFI CCNGG 1 cut(s) 149
SetI ASST 4 cut(s) 107, 141, 150, 157
SgeI CNNG 8 cut(s) 55, 62, 78, 94, 135, 149, 160, 161
Sse9I AATT 1 cut(s) 159
SseBI AGGCCT 1 cut(s) 7
StuI AGGCCT 1 cut(s) 7
StyD4I CCNGG 1 cut(s) 147
TasI AATT 1 cut(s) 159
Tru1I TTAA 1 cut(s) 158
Tru9I TTAA 1 cut(s) 158
TscAI CASTG 1 cut(s) 105
TseI GCWGC 1 cut(s) 105
TspDTI ATGAA 1 cut(s) 101
TspRI CASTG 1 cut(s) 105
XceI RCATGY 1 cut(s) 69
XcmI CCANNNNNNNNNTGG 1 cut(s) 47
Zsp2I ATGCAT 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.