Rorug02G0427500

CorA-like Mg2+ transporter protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
54838508 .. 54842039
3532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0427500.1

Sequence Viewer

Length: 1218 bp
ATGGCCACCACCAATTCCATATCAACCACCAAATCTCAAGGCCTTGTGGGCAGATCTCAATCAAAATGTATCATATCACACAGTTCCTCAAAGACTCCGATCAGCGTCGGCGGGATTCAAACCCGGGTGTGGGGGTTCCACACCTGGAAGCTCTTACCAACTCGACCTAAAAGCTTCTCTGTCAGGGAAATGGGGAGGCAACTGAATCTGCTTCTTATGCAAATGTGCTTGATTCTGGGTGTTTTGCCATTTCATGGATCTGCAGTATCAACATGTGGTTGTGTGCAGCCAATTGAAGTTAAACTCCAACTAGATGTTGCAATATACACATTCTTCCCTTCAGTTTCAAAGCTGGCTGAGGAAATCGCAGACAGTGTTGCACTAAACCATAGCCAAGTTCGCATAATGGGAGCAGATGCATCTAGTCAGCAGCTGGAGAAAACTGCCGTCCTCGTTAACTTGGTACCTATAGGACTAACATTTGATGGCACTACTGCATTTCAAATCTATGACAAATTCTGGCGCAGACAGGGTCTTCCACCTTCTCCCCCTTCAGCACCTTCAGCCATTTCTACTATAGATGACGGGCCATACATGGGCCAAGACAACAATGGAAGGGTAATAAAACCTATACCAGTTAATGTGCCAAGAAAAAGAAATGATGGAATCAAAGGAAGTATGCTTGCTGTGATCGTTCTATCATCTTTCACAGCCTTTCTTTTATGTGTGGGGTTTGTCTGGCTTTTGTTGCTGAAATGTCGATCTCACTCCCATAAGCCGGAACATTTTCCACAAGCTTTGACATCGTCCCCTACAAAACTCACAGGGGATCCCAGTGCTACTTTAGATGATGGACGAGAGGTGGCTGTGAAGGTTCTGAAGAGAGATGATCATCATGGTGGCCGCGAATTCTTAGCAGAAGTTGAGATGCTTGGCTGTCTTCACCACAGAAATTTGGTCAAATTAATTGGTATCTGCACAGAGGGCCATACTCGTTGCCTCGTTTACGAACTTGTTCCAAATGGAAGTGTTGAATGCCATTTACATGGTGTTGACAAGGAAACTGATCCACTTGATTGGGATGCCAGAATAAAGATTGCCCTTGGTGCAGCTCAGGGCTTAGCTTATCTCCACGAAGACTCAAATCCTCGAGTTATACATAGTGACTTCAAGGCCAGCAACATCTTACTGGAATATGATTTTACACCCAAGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

405

Amino Acids

44.36

Weight (kDa)

8.47

Isoelectric Point (pI)

39.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALE2_N PF23180 88 - 177 3.1e-38 Receptor-like PK ALE2 N-terminal domain
Pkinase PF00069 283 - 400 1.5e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 284 - 402 1.2e-20 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 463
AccB1I GGYRCC 1 cut(s) 463
AccB7I CCANNNNNTGG 1 cut(s) 254
AccII CGCG 1 cut(s) 906
AciI CCGC 2 cut(s) 111, 904
AclWI GGATC 4 cut(s) 265, 824, 837, 1061
AcoI YGGCCR 2 cut(s) 3, 901
AcsI RAATTY 3 cut(s) 515, 908, 952
AcuI CTGAAG 4 cut(s) 324, 537, 546, 899
AfaI GTAC 1 cut(s) 465
AfiI CCNNNNNNNGG 5 cut(s) 129, 130, 254, 596, 778
AflIII ACRYGT 1 cut(s) 272
AgsI TTSAA 6 cut(s) 119, 296, 348, 503, 1034, 1171
AjnI CCWGG 1 cut(s) 143
AluBI AGCT 7 cut(s) 151, 174, 352, 433, 797, 1112, 1124
AluI AGCT 7 cut(s) 151, 174, 352, 433, 797, 1112, 1124
AlwI GGATC 4 cut(s) 265, 824, 837, 1061
AlwNI CAGNNNCTG 1 cut(s) 433
Ama87I CYCGRG 2 cut(s) 123, 1149
AoxI GGCC 7 cut(s) 3, 40, 587, 598, 901, 985, 1173
ApeKI GCWGC 3 cut(s) 286, 430, 1109
ApoI RAATTY 3 cut(s) 515, 908, 952
AseI ATTAAT 1 cut(s) 965
Asp700I GAANNNNTTC 2 cut(s) 786, 1014
Asp718I GGTACC 1 cut(s) 463
AspLEI GCGC 1 cut(s) 525
AspS9I GGNCC 3 cut(s) 587, 598, 985
AsuC2I CCSGG 2 cut(s) 124, 125
AsuHPI GGTGA 1 cut(s) 935
AvaI CYCGRG 2 cut(s) 123, 1149
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 829
BanI GGYRCC 1 cut(s) 463
BbsI GAAGAC 3 cut(s) 527, 932, 1143
BbvCI CCTCAGC 1 cut(s) 357
BbvI GCAGC 3 cut(s) 298, 442, 1121
BccI CCATC 3 cut(s) 479, 656, 845
BceAI ACGGC 1 cut(s) 431
BciT130I CCWGG 1 cut(s) 145
BclI TGATCA 1 cut(s) 889
BcnI CCSGG 2 cut(s) 124, 125
BfaI CTAG 2 cut(s) 311, 423
BfmI CTRYAG 3 cut(s) 261, 468, 576
BglI GCCNNNNNGGC 1 cut(s) 48
BglII AGATCT 1 cut(s) 53
BisI GCNGC 4 cut(s) 287, 431, 904, 1110
BlpI GCTNAGC 1 cut(s) 1120
BlsI GCNGC 4 cut(s) 288, 432, 905, 1111
Bme1390I CCNGG 3 cut(s) 124, 125, 145
BmeT110I CYCGRG 2 cut(s) 123, 1149
BmgT120I GGNCC 3 cut(s) 587, 598, 985
BmiI GGNNCC 3 cut(s) 137, 465, 831
BmrFI CCNGG 3 cut(s) 124, 125, 145
BmrI ACTGGG 1 cut(s) 828
BmsI GCATC 4 cut(s) 406, 428, 918, 1072
BmuI ACTGGG 1 cut(s) 828
BpiI GAAGAC 3 cut(s) 527, 932, 1143
BpmI CTGGAG 1 cut(s) 455
Bpu10I CCTNAGC 2 cut(s) 357, 1113
Bpu1102I GCTNAGC 1 cut(s) 1120
BpuEI CTTGAG 1 cut(s) 21
BpuMI CCSGG 2 cut(s) 124, 125
BsaBI GATNNNNATC 2 cut(s) 58, 891
BsaJI CCNNGG 3 cut(s) 123, 1102, 1209
Bsc4I CCNNNNNNNGG 5 cut(s) 129, 130, 254, 596, 778
Bse1I ACTGG 3 cut(s) 635, 834, 1194
Bse8I GATNNNNATC 2 cut(s) 58, 891
BseBI CCWGG 1 cut(s) 145
BseDI CCNNGG 3 cut(s) 123, 1102, 1209
BseGI GGATG 1 cut(s) 1087
BseJI GATNNNNATC 2 cut(s) 58, 891
BseLI CCNNNNNNNGG 5 cut(s) 129, 130, 254, 596, 778
BseMII CTCAG 2 cut(s) 348, 1127
BseNI ACTGG 3 cut(s) 635, 834, 1194
BseXI GCAGC 3 cut(s) 298, 442, 1121
BsgI GTGCAG 3 cut(s) 305, 961, 1128
Bsh1236I CGCG 1 cut(s) 906
BshFI GGCC 7 cut(s) 5, 42, 589, 600, 903, 987, 1175
BshNI GGYRCC 1 cut(s) 463
BsiHKCI CYCGRG 2 cut(s) 123, 1149
BsiSI CCGG 2 cut(s) 124, 779
BslFI GGGAC 1 cut(s) 793
BslI CCNNNNNNNGG 5 cut(s) 129, 130, 254, 596, 778
BsmFI GGGAC 1 cut(s) 793
BsmI GAATGC 1 cut(s) 1040
BsnI GGCC 7 cut(s) 5, 42, 589, 600, 903, 987, 1175
BsoBI CYCGRG 2 cut(s) 123, 1149
Bsp143I GATC 8 cut(s) 53, 99, 257, 690, 761, 829, 889, 1066
Bsp1720I GCTNAGC 1 cut(s) 1120
BspACI CCGC 2 cut(s) 111, 904
BspANI GGCC 7 cut(s) 5, 42, 589, 600, 903, 987, 1175
BspCNI CTCAG 2 cut(s) 349, 1126
BspFNI CGCG 1 cut(s) 906
BspLI GGNNCC 3 cut(s) 137, 465, 831
BspMAI CTGCAG 1 cut(s) 265
BspPI GGATC 4 cut(s) 265, 824, 837, 1061
BspT107I GGYRCC 1 cut(s) 463
BsrI ACTGG 3 cut(s) 635, 834, 1194
BssECI CCNNGG 3 cut(s) 123, 1102, 1209
BssMI GATC 8 cut(s) 53, 99, 257, 690, 761, 829, 889, 1066
BssT1I CCWWGG 2 cut(s) 1102, 1209
Bst2UI CCWGG 1 cut(s) 145
Bst4CI ACNGT 2 cut(s) 83, 374
Bst6I CTCTTC 1 cut(s) 875
BstC8I GCNNGC 3 cut(s) 354, 684, 1177
BstDEI CTNAG 4 cut(s) 357, 913, 1113, 1120
BstF5I GGATG 1 cut(s) 1087
BstFNI CGCG 1 cut(s) 906
BstHHI GCGC 1 cut(s) 525
BstKTI GATC 8 cut(s) 56, 102, 260, 693, 764, 832, 892, 1069
BstMBI GATC 8 cut(s) 53, 99, 257, 690, 761, 829, 889, 1066
BstMWI GCNNNNNNNGC 7 cut(s) 48, 217, 399, 563, 748, 984, 1106
BstNI CCWGG 1 cut(s) 145
BstNSI RCATGY 1 cut(s) 276
BstSCI CCNGG 3 cut(s) 122, 123, 143
BstSFI CTRYAG 3 cut(s) 261, 468, 576
BstUI CGCG 1 cut(s) 906
BstV1I GCAGC 3 cut(s) 298, 442, 1121
BstV2I GAAGAC 3 cut(s) 527, 932, 1143
BstX2I RGATCY 3 cut(s) 53, 257, 829
BstXI CCANNNNNNTGG 2 cut(s) 1046, 1077
BstYI RGATCY 3 cut(s) 53, 257, 829
BsuRI GGCC 7 cut(s) 5, 42, 589, 600, 903, 987, 1175
BtsCI GGATG 1 cut(s) 1087
BtsIMutI CAGTG 2 cut(s) 379, 841
Cac8I GCNNGC 3 cut(s) 354, 684, 1177
CaiI CAGNNNCTG 1 cut(s) 433
CfoI GCGC 1 cut(s) 525
Cfr13I GGNCC 3 cut(s) 587, 598, 985
Cfr9I CCCGGG 1 cut(s) 123
CseI GACGC 1 cut(s) 94
Csp6I GTAC 1 cut(s) 464
CspCI CAANNNNNGTGG 2 cut(s) 780, 815
CviAII CATG 5 cut(s) 254, 273, 595, 896, 1046
CviQI GTAC 1 cut(s) 464
DdeI CTNAG 4 cut(s) 357, 913, 1113, 1120
DpnI GATC 8 cut(s) 55, 101, 259, 692, 763, 831, 891, 1068
DpnII GATC 8 cut(s) 53, 99, 257, 690, 761, 829, 889, 1066
EaeI YGGCCR 2 cut(s) 3, 901
Eam1104I CTCTTC 1 cut(s) 875
EarI CTCTTC 1 cut(s) 875
Eco130I CCWWGG 2 cut(s) 1102, 1209
Eco147I AGGCCT 1 cut(s) 42
Eco57I CTGAAG 4 cut(s) 324, 537, 546, 899
Eco88I CYCGRG 2 cut(s) 123, 1149
EcoRI GAATTC 1 cut(s) 908
EcoRII CCWGG 1 cut(s) 143
EcoT14I CCWWGG 2 cut(s) 1102, 1209
EcoT22I ATGCAT 1 cut(s) 421
ErhI CCWWGG 2 cut(s) 1102, 1209
FaeI CATG 5 cut(s) 257, 276, 598, 899, 1049
FaqI GGGAC 1 cut(s) 793
FatI CATG 5 cut(s) 253, 272, 594, 895, 1045
FauI CCCGC 1 cut(s) 104
FbaI TGATCA 1 cut(s) 889
Fnu4HI GCNGC 4 cut(s) 287, 431, 904, 1110
FokI GGATG 1 cut(s) 1094
Fsp4HI GCNGC 4 cut(s) 287, 431, 904, 1110
FspBI CTAG 2 cut(s) 311, 423
GlaI GCGC 1 cut(s) 524
GluI GCNGC 4 cut(s) 287, 431, 904, 1110
GsuI CTGGAG 1 cut(s) 455
HaeIII GGCC 7 cut(s) 5, 42, 589, 600, 903, 987, 1175
HapII CCGG 2 cut(s) 124, 779
HgaI GACGC 1 cut(s) 94
HhaI GCGC 1 cut(s) 525
Hin1II CATG 5 cut(s) 257, 276, 598, 899, 1049
Hin6I GCGC 1 cut(s) 523
HinP1I GCGC 1 cut(s) 523
HincII GTYRAC 2 cut(s) 457, 1054
HindII GTYRAC 2 cut(s) 457, 1054
HindIII AAGCTT 2 cut(s) 172, 795
HinfI GANTC 6 cut(s) 94, 115, 205, 232, 666, 1139
HpaI GTTAAC 1 cut(s) 457
HpaII CCGG 2 cut(s) 124, 779
HphI GGTGA 1 cut(s) 935
Hpy166II GTNNAC 3 cut(s) 457, 1006, 1054
Hpy188I TCNGA 2 cut(s) 99, 879
Hpy8I GTNNAC 3 cut(s) 457, 1006, 1054
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 6 cut(s) 348, 552, 561, 570, 609, 865
HpyCH4III ACNGT 2 cut(s) 83, 374
HpyCH4V TGCA 9 cut(s) 220, 263, 286, 320, 380, 419, 497, 978, 1109
HpyF10VI GCNNNNNNNGC 7 cut(s) 48, 217, 399, 563, 748, 984, 1106
HpyF3I CTNAG 4 cut(s) 357, 913, 1113, 1120
Hsp92II CATG 5 cut(s) 257, 276, 598, 899, 1049
HspAI GCGC 1 cut(s) 523
KpnI GGTACC 1 cut(s) 467
Ksp22I TGATCA 1 cut(s) 889
KspAI GTTAAC 1 cut(s) 457
Kzo9I GATC 8 cut(s) 53, 99, 257, 690, 761, 829, 889, 1066
LmnI GCTCC 1 cut(s) 410
Lsp1109I GCAGC 3 cut(s) 298, 442, 1121
LweI GCATC 4 cut(s) 406, 428, 918, 1072
MaeI CTAG 2 cut(s) 311, 423
MaeIII GTNAC 1 cut(s) 1163
MalI GATC 8 cut(s) 55, 101, 259, 692, 763, 831, 891, 1068
MboI GATC 8 cut(s) 53, 99, 257, 690, 761, 829, 889, 1066
MboII GAAGA 5 cut(s) 325, 527, 892, 932, 1148
MfeI CAATTG 1 cut(s) 291
MflI RGATCY 3 cut(s) 53, 257, 829
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 13, 291, 515, 908, 952, 962, 966
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 88, 1133
MmeI TCCRAC 1 cut(s) 331
MnlI CCTC 8 cut(s) 97, 189, 352, 461, 853, 976, 1010, 1158
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 421
MroXI GAANNNNTTC 2 cut(s) 786, 1014
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 300, 456, 639, 965
MslI CAYNNNNRTG 2 cut(s) 897, 1044
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 433
MspI CCGG 2 cut(s) 124, 779
MspR9I CCNGG 3 cut(s) 124, 125, 145
MunI CAATTG 1 cut(s) 291
Mva1269I GAATGC 1 cut(s) 1040
MvaI CCWGG 1 cut(s) 145
MvnI CGCG 1 cut(s) 906
MwoI GCNNNNNNNGC 7 cut(s) 48, 217, 399, 563, 748, 984, 1106
NciI CCSGG 2 cut(s) 124, 125
NdeII GATC 8 cut(s) 53, 99, 257, 690, 761, 829, 889, 1066
NlaIII CATG 5 cut(s) 257, 276, 598, 899, 1049
NlaIV GGNNCC 3 cut(s) 137, 465, 831
NmuCI GTSAC 1 cut(s) 1163
NsiI ATGCAT 1 cut(s) 421
NspI RCATGY 1 cut(s) 276
PaeR7I CTCGAG 1 cut(s) 1149
PceI AGGCCT 1 cut(s) 42
PciI ACATGT 1 cut(s) 272
PctI GAATGC 1 cut(s) 1040
PdmI GAANNNNTTC 2 cut(s) 786, 1014
PfeI GAWTC 4 cut(s) 115, 205, 232, 666
PflFI GACNNNGTC 2 cut(s) 531, 805
PflMI CCANNNNNTGG 1 cut(s) 254
PkrI GCNGC 4 cut(s) 288, 432, 905, 1111
PleI GAGTC 2 cut(s) 88, 1133
PpsI GAGTC 2 cut(s) 88, 1133
PscI ACATGT 1 cut(s) 272
PshBI ATTAAT 1 cut(s) 965
Psp6I CCWGG 1 cut(s) 143
PspGI CCWGG 1 cut(s) 143
PspN4I GGNNCC 3 cut(s) 137, 465, 831
PspPI GGNCC 3 cut(s) 587, 598, 985
PspXI VCTCGAGB 1 cut(s) 1149
PstI CTGCAG 1 cut(s) 265
PstNI CAGNNNCTG 1 cut(s) 433
PsuI RGATCY 3 cut(s) 53, 257, 829
PsyI GACNNNGTC 2 cut(s) 531, 805
PvuII CAGCTG 1 cut(s) 433
RsaI GTAC 1 cut(s) 465
RsaNI GTAC 1 cut(s) 464
RseI CAYNNNNRTG 2 cut(s) 897, 1044
SaqAI TTAA 4 cut(s) 300, 456, 639, 965
SatI GCNGC 4 cut(s) 287, 431, 904, 1110
Sau3AI GATC 8 cut(s) 53, 99, 257, 690, 761, 829, 889, 1066
Sau96I GGNCC 3 cut(s) 587, 598, 985
SchI GAGTC 2 cut(s) 88, 1133
ScrFI CCNGG 3 cut(s) 124, 125, 145
SfaNI GCATC 4 cut(s) 406, 428, 918, 1072
SfcI CTRYAG 3 cut(s) 261, 468, 576
Sfr274I CTCGAG 1 cut(s) 1149
SlaI CTCGAG 1 cut(s) 1149
SmaI CCCGGG 1 cut(s) 125
SmiMI CAYNNNNRTG 2 cut(s) 897, 1044
SmlI CTYRAG 2 cut(s) 36, 1149
SmoI CTYRAG 2 cut(s) 36, 1149
Sse9I AATT 7 cut(s) 13, 291, 515, 908, 952, 962, 966
SseBI AGGCCT 1 cut(s) 42
SsiI CCGC 2 cut(s) 111, 904
SspMI CTAG 2 cut(s) 311, 423
StuI AGGCCT 1 cut(s) 42
StyD4I CCNGG 3 cut(s) 122, 123, 143
StyI CCWWGG 2 cut(s) 1102, 1209
TaaI ACNGT 2 cut(s) 83, 374
TaqI TCGA 3 cut(s) 163, 760, 1150
TasI AATT 7 cut(s) 13, 291, 515, 908, 952, 962, 966
TauI GCSGC 1 cut(s) 906
TfiI GAWTC 4 cut(s) 115, 205, 232, 666
Tru1I TTAA 4 cut(s) 300, 456, 639, 965
Tru9I TTAA 4 cut(s) 300, 456, 639, 965
TscAI CASTG 2 cut(s) 379, 841
TseFI GTSAC 1 cut(s) 1163
TseI GCWGC 3 cut(s) 286, 430, 1109
Tsp45I GTSAC 1 cut(s) 1163
TspDTI ATGAA 1 cut(s) 242
TspMI CCCGGG 1 cut(s) 123
TspRI CASTG 2 cut(s) 379, 841
Tth111I GACNNNGTC 2 cut(s) 531, 805
Van91I CCANNNNNTGG 1 cut(s) 254
VspI ATTAAT 1 cut(s) 965
XapI RAATTY 3 cut(s) 515, 908, 952
XceI RCATGY 1 cut(s) 276
XcmI CCANNNNNNNNNTGG 1 cut(s) 608
XhoI CTCGAG 1 cut(s) 1149
XmaI CCCGGG 1 cut(s) 123
XmnI GAANNNNTTC 2 cut(s) 786, 1014
XspI CTAG 2 cut(s) 311, 423
Zsp2I ATGCAT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.