Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0004111

Physical Location & Seq

Genomic Coordinates Reverse (-)

16411183 .. 16416163

Gene Structure 4981 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1165400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGCTACCGAGTTCACCAGCTGCGTCGAGTACGGCCTCGGCCTCTCCAAGCGGGTGTTCTACGGCAAGGAGTCGGTCCCCAATCCGTCGGAGATGAAGAGGTCATCGAAGTCTTATTTTCCGGAGGCTCCGATGGTGTACGCGGTGGTTTCCGACCCGGAAATCGTCGATAATCCGGACATTCCGAGCTACCAGCCGTACGTCCACGGCCTCTGTCAACCGCCCGCGTTGATACCTCTGCATATGCACGGGATAGGTATGGAGATCGAGGTTTACCTGGATACCGCGTTTGTTACCGTGAGCGGCACGTGGCGCGTTCATTGTGTTTCCGCCGCGAAAAGGTGCGAGTGTCGCGTGGCCGTGCCGATGGGCGAGCAGGGTTCACTTCTAGGTGTTGAGTCTGAAGCCGCCGGAAGATCATATCGGACTCAGCTGATCGCGGCGGAGGACCCAAGAAATGTGGAGAAAGTAGGCCAAGATGGTTACTTTCTGAAACGCCAGGCATACACTTTGAAAGTCCCACAGGTTGATGGAGGCTCATTACTTTCGTTCAAGATCAGATGGTCTCAGAAATTGTTGTATCATGATGGCCACTTCTCCCTCAGTGTACCTTTTCGTTTTCCGGCATATGTCAATCCCGTTGGGAGGAAAATTTCAAAGCGGGAAAAGATTTTGTTGAATGTGAATGTCGGTACTAACATAGACCTTTCATGGAAAAGTACCAGCCACCCTCTTAAGGAGGTGAGGCGCCAAAGCGGTAGATTGAGTTTTTCATATGAAGCAGAGGTACAATCATGGTCAAGTGCGGCCTTTAGTTTTTCATACACTGTTCATACAAATGACTTGTATGGTGGTGTGTTCTTGCAATCTCCAACGCTTCGTGATTTTGATGATAGGGAGATGTTCTACTTCTATCTGATGCCCCGGAATACCCAGATTAGAAGGGTTTTTAAAAGGCAAGTTATATTCATTGTTGATATGAGTCGAAGCATGCTGGGAGACCCTCTTGAAAATGCAAAGAATGCACTGTTGGCATCACTTTCTAATCTCAACCGAGAAGATACTTTCAACATAATAGCTTTCAATGAAGGGGTTCACTTATTCTCATCATCAATGGAGTTGGCAACAAATGAGGCAATGCTAAAAGCTAAGAACTGGGTTGATGCCAATCTTAATGCGAATGGTGGTACAAATATCTTGCTTCCCCTCAGAGAGGCTATGATATTGTTGGCCAAGACGGTTGATTCACTTCCCTTCATCTTTCTCGTAACTGATGGGGCAGTTGAAAATGAGAGGGAGATTTGCACTTTTATGAAAGGTTATGCTAGTGCAGGTTCAGTTTGTCCTCGCATATCTACTCTTGGCATAGGTTTATATTGTAACCATTACTTTCTGCAAATGCTAGCCCAAATTGGGAAGGGCTACTATGATGCTGCTTATGATTCAGAGTCAATTGACTATAAAATGCAAAGGTTATTCACAAGTGCATCGTCAGTGATTCTTGCCAATATAACCGTGGATGCTTTAGACTCTCTTGATTCACTTGAGCGGTATCCATCTCATATTCCAGACCTTTCATCTGGAAGTCCATTGATCATGTCAGGCAGATACGAGGGAAGCTTTCCCGATTCCATTAAAGTTCGTGGTACCTTGGCTGATATGAGCAATTTTGTAATAGACTTGAAAGTGCAAAGATCTAAGGATATTCCACTTGATCAGGTGCTTGCAAGAAGGCACATTGACATGCTTACAGCTCATGCATGGTTATTGGGAAGTAAAGAGCTAGAAGAGAAGGTTTCTAAATTGAGCAAACAAACAGGGGTTCCATCTGAGTACACTTGCTTGATACTATTGCTGACTAATGAGGGGAAGAAAGCACCGGAATCAGTTATGATCCAAGAGGTCTACAACAAAATTACTCAGCGGAAGAAGCCAGAGTCGAATAACCAGAAGGTGATAATCCTCGGAAACCTGGGTTTTGGCTTTGGTAACTTGACTGCAACGGTCCAGAACAAAGCACCAGGAAGCGAAGAAGAAAAGCCGGCTGATGCCACAGAAATGTTGGTGAACGCGGCTTCCAACTGCTGCAGCCGAGTACTGGACCGCGTCTGTTGCATGTGTTTCATTAGGACTTGTTCGCACATGAACAACCAGTGCGCGATTGTTCTCACACAAGTCTGCACTGCCCTTGCCTGCATTGAGTGCCTGAATTGTTGCTATGAACTATTCGCAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA_3

Protein Analysis

746

Amino Acids

83.0

Weight (kDa)

6.56

Isoelectric Point (pI)

46.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VWA_3	PF13768	320 - 477	8.8e-14	von Willebrand factor type A domain
VWA_2	PF13519	321 - 426	9.8e-10	von Willebrand factor type A domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72500 AT1G72500 AT1G72500
fragaria_vesca	FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050
malus_domestica	MD09G1179800.v1.1 MD17G1165400.v1.1
prunus_persica	Prupe.3G038500_v2.0.a1 Prupe.3G038500_v2.0.a1 Prupe.3G038500_v2.0.a1
pyrus_communis	pycom09g09750 pycom17g15810
rosa_chinensis	RchiOBHm_Chr2g0146211
rosa_laevigata	RLG00000020186
rosa_multiflora	Rmu_ssc0000305.1_g000001
rosa_roxburghii	Rroxscaffold_152G00434910 Rroxscaffold_1G00024240 Rroxscaffold_1G00059690 Rroxscaffold_2G00100240 Rroxscaffold_2G00150940 Rroxscaffold_5G00356980 Rroxscaffold_7G00181760
rosa_rugosa	Rorug02G0393800
rosa_samantha	Rh2AG449800 Rh2BG462000 Rh2CG436700 Rh2DG471300
rosa_wichuraiana	Rw2G036710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1322
Acc65I	GGTACC	1 cut(s)	1646
AccB1I	GGYRCC	2 cut(s)	747, 1646
AccBSI	CCGCTC	2 cut(s)	303, 1549
AccI	GTMKAC	1 cut(s)	1905
AccIII	TCCGGA	2 cut(s)	121, 175
AclWI	GGATC	1 cut(s)	1888
AcoI	YGGCCR	3 cut(s)	357, 589, 1230
AcsI	RAATTY	1 cut(s)	651
AcuI	CTGAAG	1 cut(s)	423
AcvI	CACGTG	1 cut(s)	309
AcyI	GRCGYC	1 cut(s)	748
AfiI	CCNNNNNNNGG	6 cut(s)	339, 645, 736, 1213, 1413, 2098
AflII	CTTAAG	1 cut(s)	734
AgsI	TTSAA	9 cut(s)	514, 553, 657, 679, 1010, 1069, 1084, 1286, 1684
AjnI	CCWGG	4 cut(s)	276, 498, 1971, 2020
AjuI	GAANNNNNNNTTGG	4 cut(s)	41, 73, 1013, 1045
AloI	GAACNNNNNNTCC	2 cut(s)	2060, 2092
AluBI	AGCT	8 cut(s)	21, 189, 433, 1079, 1148, 1620, 1754, 1783
AluI	AGCT	8 cut(s)	21, 189, 433, 1079, 1148, 1620, 1754, 1783
Alw26I	GTCTC	2 cut(s)	570, 993
AlwI	GGATC	1 cut(s)	1888
Aor13HI	TCCGGA	2 cut(s)	121, 175
AoxI	GGCC	8 cut(s)	34, 40, 208, 357, 472, 589, 807, 1230
ApeKI	GCWGC	4 cut(s)	21, 1433, 2085, 2088
ApoI	RAATTY	1 cut(s)	651
Asp700I	GAANNNNTTC	1 cut(s)	1092
Asp718I	GGTACC	1 cut(s)	1646
AspLEI	GCGC	3 cut(s)	315, 750, 2159
AspS9I	GGNCC	4 cut(s)	76, 448, 2005, 2101
AsuC2I	CCSGG	2 cut(s)	158, 925
AsuHPI	GGTGA	4 cut(s)	7, 754, 1966, 2077
AsuNHI	GCTAGC	1 cut(s)	1402
AvaII	GGWCC	4 cut(s)	76, 448, 2005, 2101
BalI	TGGCCA	2 cut(s)	591, 1232
BanI	GGYRCC	2 cut(s)	747, 1646
BarI	GAAGNNNNNNTAC	2 cut(s)	771, 803
BbrPI	CACGTG	1 cut(s)	309
BbvI	GCAGC	4 cut(s)	8, 1420, 2072, 2100
BccI	CCATC	9 cut(s)	127, 361, 473, 524, 555, 581, 1268, 1564, 1834
BceAI	ACGGC	5 cut(s)	49, 79, 181, 223, 344
BciT130I	CCWGG	4 cut(s)	278, 500, 1973, 2022
BciVI	GTATCC	2 cut(s)	274, 1563
BclI	TGATCA	2 cut(s)	1593, 1714
BcnI	CCSGG	2 cut(s)	158, 925
BcoDI	GTCTC	2 cut(s)	570, 993
BfaI	CTAG	4 cut(s)	389, 1326, 1403, 1784
BfmI	CTRYAG	1 cut(s)	2086
BfoI	RGCGCY	1 cut(s)	751
BfrI	CTTAAG	1 cut(s)	734
BfuAI	ACCTGC	1 cut(s)	1322
BfuI	GTATCC	2 cut(s)	274, 1563
BglII	AGATCT	1 cut(s)	1694
BmcAI	AGTACT	1 cut(s)	2097
Bme1390I	CCNGG	6 cut(s)	158, 278, 500, 925, 1973, 2022
Bme18I	GGWCC	4 cut(s)	76, 448, 2005, 2101
BmgT120I	GGNCC	4 cut(s)	76, 448, 2005, 2101
BmiI	GGNNCC	6 cut(s)	78, 129, 450, 749, 1648, 1824
BmrFI	CCNGG	6 cut(s)	158, 278, 500, 925, 1973, 2022
BmrI	ACTGGG	1 cut(s)	1165
BmsI	GCATC	7 cut(s)	909, 1043, 1153, 1420, 1496, 1510, 2038
BmtI	GCTAGC	1 cut(s)	1406
BmuI	ACTGGG	1 cut(s)	1165
BpuEI	CTTGAG	1 cut(s)	1565
BpuMI	CCSGG	2 cut(s)	158, 925
BsaAI	YACGTR	1 cut(s)	309
BsaBI	GATNNNNATC	1 cut(s)	1167
BsaHI	GRCGYC	1 cut(s)	748
BsaI	GGTCTC	2 cut(s)	570, 993
BsaJI	CCNNGG	7 cut(s)	37, 205, 923, 1515, 1650, 1963, 1972
BsaWI	WCCGGW	3 cut(s)	121, 175, 1879
Bsc4I	CCNNNNNNNGG	6 cut(s)	339, 645, 736, 1213, 1413, 2098
Bse118I	RCCGGY	1 cut(s)	2041
Bse1I	ACTGG	3 cut(s)	1160, 2103, 2152
Bse3DI	GCAATG	1 cut(s)	1143
Bse8I	GATNNNNATC	1 cut(s)	1167
BseAI	TCCGGA	2 cut(s)	121, 175
BseBI	CCWGG	4 cut(s)	278, 500, 1973, 2022
BseDI	CCNNGG	7 cut(s)	37, 205, 923, 1515, 1650, 1963, 1972
BseGI	GGATG	1 cut(s)	1525
BseJI	GATNNNNATC	1 cut(s)	1167
BseLI	CCNNNNNNNGG	6 cut(s)	339, 645, 736, 1213, 1413, 2098
BseMI	GCAATG	1 cut(s)	1143
BseMII	CTCAG	6 cut(s)	443, 581, 616, 1222, 1821, 1934
BseNI	ACTGG	3 cut(s)	1160, 2103, 2152
BseXI	GCAGC	4 cut(s)	8, 1420, 2072, 2100
BseYI	CCCAGC	1 cut(s)	994
BsgI	GTGCAG	2 cut(s)	1350, 2164
BshFI	GGCC	8 cut(s)	36, 42, 210, 359, 474, 591, 809, 1232
BshNI	GGYRCC	2 cut(s)	747, 1646
BsiSI	CCGG	8 cut(s)	122, 158, 176, 411, 623, 925, 1880, 2042
BsiWI	CGTACG	1 cut(s)	198
BslFI	GGGAC	2 cut(s)	62, 503
BslI	CCNNNNNNNGG	6 cut(s)	339, 645, 736, 1213, 1413, 2098
BsmAI	GTCTC	2 cut(s)	570, 993
BsmFI	GGGAC	2 cut(s)	62, 503
BsmI	GAATGC	1 cut(s)	1027
BsnI	GGCC	8 cut(s)	36, 42, 210, 359, 474, 591, 809, 1232
Bso31I	GGTCTC	2 cut(s)	570, 993
Bsp13I	TCCGGA	2 cut(s)	121, 175
Bsp143I	GATC	8 cut(s)	264, 416, 435, 555, 1593, 1694, 1714, 1893
BspANI	GGCC	8 cut(s)	36, 42, 210, 359, 474, 591, 809, 1232
BspCNI	CTCAG	6 cut(s)	442, 580, 615, 1221, 1822, 1933
BspEI	TCCGGA	2 cut(s)	121, 175
BspHI	TCATGA	1 cut(s)	583
BspLI	GGNNCC	6 cut(s)	78, 129, 450, 749, 1648, 1824
BspMAI	CTGCAG	1 cut(s)	2090
BspMI	ACCTGC	1 cut(s)	1322
BspOI	GCTAGC	1 cut(s)	1406
BspPI	GGATC	1 cut(s)	1888
BspT107I	GGYRCC	2 cut(s)	747, 1646
BspTI	CTTAAG	1 cut(s)	734
BspTNI	GGTCTC	2 cut(s)	570, 993
BsrBI	CCGCTC	2 cut(s)	303, 1549
BsrDI	GCAATG	1 cut(s)	1143
BsrFI	RCCGGY	1 cut(s)	2041
BsrI	ACTGG	3 cut(s)	1160, 2103, 2152
BssAI	RCCGGY	1 cut(s)	2041
BssECI	CCNNGG	7 cut(s)	37, 205, 923, 1515, 1650, 1963, 1972
BssMI	GATC	8 cut(s)	264, 416, 435, 555, 1593, 1694, 1714, 1893
BssNI	GRCGYC	1 cut(s)	748
BssT1I	CCWWGG	1 cut(s)	1650
Bst2UI	CCWGG	4 cut(s)	278, 500, 1973, 2022
Bst4CI	ACNGT	6 cut(s)	298, 829, 1029, 1240, 1516, 2005
Bst6I	CTCTTC	2 cut(s)	92, 1782
BstACI	GRCGYC	1 cut(s)	748
BstAFI	CTTAAG	1 cut(s)	734
BstAPI	GCANNNNNTGC	2 cut(s)	1022, 2202
BstBAI	YACGTR	1 cut(s)	309
BstC8I	GCNNGC	7 cut(s)	225, 374, 992, 1404, 1725, 2043, 2194
BstDEI	CTNAG	8 cut(s)	429, 567, 602, 1149, 1208, 1698, 1830, 1920
BstDSI	CCRYGG	2 cut(s)	205, 1515
BstENI	CCTNNNNNAGG	1 cut(s)	1211
BstF5I	GGATG	1 cut(s)	1525
BstH2I	RGCGCY	1 cut(s)	751
BstHHI	GCGC	3 cut(s)	315, 750, 2159
BstKTI	GATC	8 cut(s)	267, 419, 438, 558, 1596, 1697, 1717, 1896
BstMAI	GTCTC	2 cut(s)	570, 993
BstMBI	GATC	8 cut(s)	264, 416, 435, 555, 1593, 1694, 1714, 1893
BstMWI	GCNNNNNNNGC	7 cut(s)	312, 351, 1022, 1031, 1930, 2112, 2202
BstNI	CCWGG	4 cut(s)	278, 500, 1973, 2022
BstNSI	RCATGY	3 cut(s)	994, 1747, 2119
BstSCI	CCNGG	6 cut(s)	156, 276, 498, 923, 1971, 2020
BstSFI	CTRYAG	1 cut(s)	2086
BstV1I	GCAGC	4 cut(s)	8, 1420, 2072, 2100
BstX2I	RGATCY	1 cut(s)	1694
BstYI	RGATCY	1 cut(s)	1694
BsuI	GTATCC	2 cut(s)	274, 1563
BsuRI	GGCC	8 cut(s)	36, 42, 210, 359, 474, 591, 809, 1232
BtgI	CCRYGG	2 cut(s)	205, 1515
BtsCI	GGATG	1 cut(s)	1525
BtsI	GCAGTG	1 cut(s)	2181
BtsIMutI	CAGTG	6 cut(s)	610, 825, 1025, 1500, 2159, 2181
BveI	ACCTGC	1 cut(s)	1322
Cac8I	GCNNGC	7 cut(s)	225, 374, 992, 1404, 1725, 2043, 2194
CciI	TCATGA	1 cut(s)	583
CfoI	GCGC	3 cut(s)	315, 750, 2159
Cfr10I	RCCGGY	1 cut(s)	2041
Cfr13I	GGNCC	4 cut(s)	76, 448, 2005, 2101
CseI	GACGC	2 cut(s)	13, 2095
CspCI	CAANNNNNGTGG	2 cut(s)	441, 476
DdeI	CTNAG	8 cut(s)	429, 567, 602, 1149, 1208, 1698, 1830, 1920
DinI	GGCGCC	1 cut(s)	749
DpnI	GATC	8 cut(s)	266, 418, 437, 557, 1595, 1696, 1716, 1895
DpnII	GATC	8 cut(s)	264, 416, 435, 555, 1593, 1694, 1714, 1893
DraI	TTTAAA	1 cut(s)	952
EaeI	YGGCCR	3 cut(s)	357, 589, 1230
Eam1104I	CTCTTC	2 cut(s)	92, 1782
EarI	CTCTTC	2 cut(s)	92, 1782
EciI	GGCGGA	2 cut(s)	319, 458
Eco130I	CCWWGG	1 cut(s)	1650
Eco31I	GGTCTC	2 cut(s)	570, 993
Eco47I	GGWCC	4 cut(s)	76, 448, 2005, 2101
Eco57I	CTGAAG	1 cut(s)	423
Eco72I	CACGTG	1 cut(s)	309
EcoNI	CCTNNNNNAGG	1 cut(s)	1211
EcoO109I	RGGNCCY	1 cut(s)	448
EcoRII	CCWGG	4 cut(s)	276, 498, 1971, 2020
EcoT14I	CCWWGG	1 cut(s)	1650
EcoT22I	ATGCAT	1 cut(s)	1762
EgeI	GGCGCC	1 cut(s)	749
EheI	GGCGCC	1 cut(s)	749
ErhI	CCWWGG	1 cut(s)	1650
FaqI	GGGAC	2 cut(s)	62, 503
FauI	CCCGC	3 cut(s)	45, 232, 654
FauNDI	CATATG	3 cut(s)	243, 628, 775
FbaI	TGATCA	2 cut(s)	1593, 1714
FblI	GTMKAC	1 cut(s)	1905
FokI	GGATG	1 cut(s)	1532
FspBI	CTAG	4 cut(s)	389, 1326, 1403, 1784
GlaI	GCGC	3 cut(s)	314, 749, 2158
GsaI	CCCAGC	1 cut(s)	998
HaeII	RGCGCY	1 cut(s)	751
HaeIII	GGCC	8 cut(s)	36, 42, 210, 359, 474, 591, 809, 1232
HapII	CCGG	8 cut(s)	122, 158, 176, 411, 623, 925, 1880, 2042
HgaI	GACGC	2 cut(s)	13, 2095
HhaI	GCGC	3 cut(s)	315, 750, 2159
Hin1I	GRCGYC	1 cut(s)	748
Hin6I	GCGC	3 cut(s)	313, 748, 2157
HinP1I	GCGC	3 cut(s)	313, 748, 2157
HincII	GTYRAC	1 cut(s)	218
HindII	GTYRAC	1 cut(s)	218
HindIII	AAGCTT	1 cut(s)	1618
HpaII	CCGG	8 cut(s)	122, 158, 176, 411, 623, 925, 1880, 2042
HphI	GGTGA	4 cut(s)	7, 754, 1966, 2077
Hpy99I	CGWCG	3 cut(s)	29, 91, 170
HpyAV	CCTTC	7 cut(s)	936, 1082, 1264, 1411, 1725, 1786, 1945
HpyCH4III	ACNGT	6 cut(s)	298, 829, 1029, 1240, 1516, 2005
HpyCH4IV	ACGT	2 cut(s)	201, 308
HpyF10VI	GCNNNNNNNGC	7 cut(s)	312, 351, 1022, 1031, 1930, 2112, 2202
HpyF3I	CTNAG	8 cut(s)	429, 567, 602, 1149, 1208, 1698, 1830, 1920
HpySE526I	ACGT	2 cut(s)	201, 308
Hsp92I	GRCGYC	1 cut(s)	748
HspAI	GCGC	3 cut(s)	313, 748, 2157
KasI	GGCGCC	1 cut(s)	747
Kpn2I	TCCGGA	2 cut(s)	121, 175
KpnI	GGTACC	1 cut(s)	1650
KroI	GCCGGC	1 cut(s)	2041
KroNI	GCCGGC	1 cut(s)	2043
Ksp22I	TGATCA	2 cut(s)	1593, 1714
Kzo9I	GATC	8 cut(s)	264, 416, 435, 555, 1593, 1694, 1714, 1893
LmnI	GCTCC	1 cut(s)	133
Lsp1109I	GCAGC	4 cut(s)	8, 1420, 2072, 2100
LweI	GCATC	7 cut(s)	909, 1043, 1153, 1420, 1496, 1510, 2038
MaeI	CTAG	4 cut(s)	389, 1326, 1403, 1784
MaeII	ACGT	2 cut(s)	201, 308
MaeIII	GTNAC	5 cut(s)	292, 482, 1267, 1379, 1988
MalI	GATC	8 cut(s)	266, 418, 437, 557, 1595, 1696, 1716, 1895
MbiI	CCGCTC	2 cut(s)	303, 1549
MboI	GATC	8 cut(s)	264, 416, 435, 555, 1593, 1694, 1714, 1893
MboII	GAAGA	8 cut(s)	109, 426, 1070, 1799, 1882, 1939, 2042, 2045
MfeI	CAATTG	1 cut(s)	1452
MflI	RGATCY	1 cut(s)	1694
MlsI	TGGCCA	2 cut(s)	591, 1232
MluCI	AATT	8 cut(s)	572, 651, 1410, 1452, 1666, 1802, 1914, 2209
MluNI	TGGCCA	2 cut(s)	591, 1232
Mly113I	GGCGCC	1 cut(s)	748
MlyI	GAGTC	7 cut(s)	80, 407, 421, 991, 1457, 1523, 1946
MmeI	TCCRAC	4 cut(s)	69, 177, 896, 2103
Mox20I	TGGCCA	2 cut(s)	591, 1232
Mph1103I	ATGCAT	1 cut(s)	1762
MroI	TCCGGA	2 cut(s)	121, 175
MroNI	GCCGGC	1 cut(s)	2041
MroXI	GAANNNNTTC	1 cut(s)	1092
MscI	TGGCCA	2 cut(s)	591, 1232
MseI	TTAA	4 cut(s)	735, 951, 1173, 1635
MslI	CAYNNNNRTG	4 cut(s)	837, 1310, 1742, 2057
Msp20I	TGGCCA	2 cut(s)	591, 1232
MspA1I	CMGCKG	3 cut(s)	21, 433, 1924
MspCI	CTTAAG	1 cut(s)	734
MspI	CCGG	8 cut(s)	122, 158, 176, 411, 623, 925, 1880, 2042
MspR9I	CCNGG	6 cut(s)	158, 278, 500, 925, 1973, 2022
MunI	CAATTG	1 cut(s)	1452
Mva1269I	GAATGC	1 cut(s)	1027
MvaI	CCWGG	4 cut(s)	278, 500, 1973, 2022
MwoI	GCNNNNNNNGC	7 cut(s)	312, 351, 1022, 1031, 1930, 2112, 2202
NaeI	GCCGGC	1 cut(s)	2043
NarI	GGCGCC	1 cut(s)	748
NciI	CCSGG	2 cut(s)	158, 925
NdeI	CATATG	3 cut(s)	243, 628, 775
NdeII	GATC	8 cut(s)	264, 416, 435, 555, 1593, 1694, 1714, 1893
NgoMIV	GCCGGC	1 cut(s)	2041
NheI	GCTAGC	1 cut(s)	1402
NlaIV	GGNNCC	6 cut(s)	78, 129, 450, 749, 1648, 1824
NmeAIII	GCCGAG	2 cut(s)	18, 2117
NsiI	ATGCAT	1 cut(s)	1762
NspI	RCATGY	3 cut(s)	994, 1747, 2119
PaeI	GCATGC	1 cut(s)	994
PagI	TCATGA	1 cut(s)	583
PctI	GAATGC	1 cut(s)	1027
PdiI	GCCGGC	1 cut(s)	2043
PdmI	GAANNNNTTC	1 cut(s)	1092
PfeI	GAWTC	6 cut(s)	1244, 1442, 1498, 1538, 1628, 1883
Pfl23II	CGTACG	1 cut(s)	198
PflFI	GACNNNGTC	1 cut(s)	2105
PleI	GAGTC	7 cut(s)	79, 406, 421, 990, 1456, 1523, 1945
PluTI	GGCGCC	1 cut(s)	751
PmaCI	CACGTG	1 cut(s)	309
PmlI	CACGTG	1 cut(s)	309
PpsI	GAGTC	7 cut(s)	79, 406, 421, 990, 1456, 1523, 1945
Ppu21I	YACGTR	1 cut(s)	309
PpuMI	RGGWCCY	1 cut(s)	448
Psp5II	RGGWCCY	1 cut(s)	448
Psp6I	CCWGG	4 cut(s)	276, 498, 1971, 2020
PspCI	CACGTG	1 cut(s)	309
PspFI	CCCAGC	1 cut(s)	994
PspGI	CCWGG	4 cut(s)	276, 498, 1971, 2020
PspLI	CGTACG	1 cut(s)	198
PspN4I	GGNNCC	6 cut(s)	78, 129, 450, 749, 1648, 1824
PspPI	GGNCC	4 cut(s)	76, 448, 2005, 2101
PspPPI	RGGWCCY	1 cut(s)	448
PstI	CTGCAG	1 cut(s)	2090
PsuI	RGATCY	1 cut(s)	1694
PsyI	GACNNNGTC	1 cut(s)	2105
PvuII	CAGCTG	2 cut(s)	21, 433
RseI	CAYNNNNRTG	4 cut(s)	837, 1310, 1742, 2057
SaqAI	TTAA	4 cut(s)	735, 951, 1173, 1635
Sau3AI	GATC	8 cut(s)	264, 416, 435, 555, 1593, 1694, 1714, 1893
Sau96I	GGNCC	4 cut(s)	76, 448, 2005, 2101
ScaI	AGTACT	1 cut(s)	2097
SchI	GAGTC	7 cut(s)	80, 407, 421, 991, 1457, 1523, 1946
ScrFI	CCNGG	6 cut(s)	158, 278, 500, 925, 1973, 2022
SfaNI	GCATC	7 cut(s)	909, 1043, 1153, 1420, 1496, 1510, 2038
SfcI	CTRYAG	1 cut(s)	2086
SfoI	GGCGCC	1 cut(s)	749
SinI	GGWCC	4 cut(s)	76, 448, 2005, 2101
SmiMI	CAYNNNNRTG	4 cut(s)	837, 1310, 1742, 2057
SmlI	CTYRAG	2 cut(s)	734, 1544
SmoI	CTYRAG	2 cut(s)	734, 1544
SphI	GCATGC	1 cut(s)	994
Sse9I	AATT	8 cut(s)	572, 651, 1410, 1452, 1666, 1802, 1914, 2209
SspDI	GGCGCC	1 cut(s)	747
SspMI	CTAG	4 cut(s)	389, 1326, 1403, 1784
StyD4I	CCNGG	6 cut(s)	156, 276, 498, 923, 1971, 2020
StyI	CCWWGG	1 cut(s)	1650
TaaI	ACNGT	6 cut(s)	298, 829, 1029, 1240, 1516, 2005
TaiI	ACGT	2 cut(s)	204, 311
TaqI	TCGA	6 cut(s)	27, 107, 168, 267, 985, 1940
TaqII	GACCGA	1 cut(s)	64
TasI	AATT	8 cut(s)	572, 651, 1410, 1452, 1666, 1802, 1914, 2209
TatI	WGTACW	2 cut(s)	1833, 2095
TauI	GCSGC	6 cut(s)	306, 335, 410, 443, 809, 2075
TfiI	GAWTC	6 cut(s)	1244, 1442, 1498, 1538, 1628, 1883
Tru1I	TTAA	4 cut(s)	735, 951, 1173, 1635
Tru9I	TTAA	4 cut(s)	735, 951, 1173, 1635
TscAI	CASTG	6 cut(s)	610, 832, 1032, 1500, 2159, 2188
TseI	GCWGC	4 cut(s)	21, 1433, 2085, 2088
TspGWI	ACGGA	1 cut(s)	75
TspRI	CASTG	6 cut(s)	610, 832, 1032, 1500, 2159, 2188
Tth111I	GACNNNGTC	1 cut(s)	2105
Vha464I	CTTAAG	1 cut(s)	734
VpaK11BI	GGWCC	4 cut(s)	76, 448, 2005, 2101
XagI	CCTNNNNNAGG	1 cut(s)	1211
XapI	RAATTY	1 cut(s)	651
XceI	RCATGY	3 cut(s)	994, 1747, 2119
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1513, 2059
XmiI	GTMKAC	1 cut(s)	1905
XmnI	GAANNNNTTC	1 cut(s)	1092
XspI	CTAG	4 cut(s)	389, 1326, 1403, 1784
ZrmI	AGTACT	1 cut(s)	2097
Zsp2I	ATGCAT	1 cut(s)	1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.