Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0004111

Physical Location & Seq

Genomic Coordinates Forward (+)

68281097 .. 68284890

Gene Structure 3794 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG471300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGGCGAGAAGGGTTCACTTCTAGGTGTAGAGGTTGATGTCGCCGGAAGTTCGTATCGGACTCAACTGATCACCACAGAAGGCCAACCGGATAGTCGGAAAGTAGCCAAAGACGCGTACTTTCTGAAACGTCACATATACACCTTCAAAGTCCCACAGGTTGAAGGAGGCTCCTTCATTTCGCTGAAAATCAGATGGTCTCAGAAATTGTTGTATCATGATGGAAAGTTCTGCCTCACTGTGCCTTTTAATTTTCCAGCATATGTTAATCCTGTTGGGAATAAAATTATGAAAGGGGAGAAGATTTCGTTTAGTGTGAATATGGGTGCTGAAGCAGAAGTTTTATGCCAAACTACAAGCCATCCTCTTAAGGTGGTCAGGCGCCAAGGCGGTAGATTGAGCTTCTCATATGAAGCACAGGTAGCAGCATGGTCAAGTACAGACTTCAGCTTTTCATTTACTGTTAACACAAAGGATGTATATGGTGGTGTGTTCTTGCAATCTCCAACTCTTCGTGATTTTGATGACAGAGAGATGTTCTGCTTCTATTTGATCCCCAGGAATAGCCAGACTTGGAAGGTTTTCAAAAAGGAAGTTATATTTATCATTGATATAAGTGCAAGTATGGCGGGAGACCCTCTTGAGAATGCAAAGAGTGCAGTACTGGCATCGCTTTCTAATCTCAACCGGGAAGATACTTTCAACATAATAGCTTTCAATGGAGAGGTTCACGTATTCTCATCATCAATGGAGTTAGCAACAAATGAAGCATTACTGAAAGCTAAGAATTGGGTTAGCGCTGAACTTATTGCAGATGGTGGTACAAATATGTTACTTCCCCTAAGACAGGCTATGAAGTTGTTGGCCAAAACTGCTGATACAATTCCTTTCATTTTCCTCATTACTGATGGGGCCGTCGAAGATGAAAGAGATATTTGCAATATGATGAAAGGATATCTGACAAGTGGGGGCTCAATATGTCCTCGAATATCTACTTTTGGCATAGGTTTATATTGTAATCATTACTTCCTGCAAATGCTAGCACAAATTGGCAGGGGGTATTATGATGCTGCTTATGATGGAGAGTCAATTGACTATAGAGTGCAAAGGCTATTCACAAGGGCATCATCAGTGACTCTTGCCAATATAACCGTGGACGCTTTTGAACATCTCGATTCGCTTGAGCTGTTTCCATCTAATATACTGGATCTTTCATCTGGAAGTCCATTGATCATATCTGGCAGATATGAGGGAAGCTTTCCTCCCTCCATTAAAGTTAGCGGTACCTTGGCTGATATGAGCAACTTTGCCATAGACTTGAAAGTGCAAAGATCTAAGGATTTCCCACTTGATCGGGTGCTTGCGAAAAGGCATATTGACATGCGTACAGCTCATGCATGGTTGTTGGGAAGTAAAGAGCTTGAAGAGAAGGTCTCTAAAATGAGCAATCTAACCGGGGTCCCATCTGAGTACACTAGCATGACACTGAAGCAGACTGATAAAGGAAATAAAGCACTGGAATTAACTCGGACACAAGAGGTCTACAAAAAAGTTATTCAGCGGACCAAGTCGGAGTCAAATAGCCAGAAGGATATAATCCTTGGAAGCCTGGGTGTTGGCTTTGGTAACCTGGCTGCAACAGTCGAGAATAAAGCACCCGCTAGCGAAGAAGCAAAGCCTTCTGATGTTGCAGGAGTCTTGGTTAAGGCTGCTTCCACCTGCTGTACTAGACTACTTGATCGCATCTGTTGCATGTGTTTCATTAGGACTTGTACCCACGTTAATAACCAGTGCGCAATTTTTCTCACACAACTCTGCGCTGCCCTTTGTTGTTGTGAGTGCTTAAATTGTTGCTTTGAATTATTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA_3

Protein Analysis

623

Amino Acids

68.95

Weight (kDa)

7.41

Isoelectric Point (pI)

33.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VWA_3	PF13768	198 - 356	6.2e-15	von Willebrand factor type A domain
VWA_2	PF13519	199 - 304	6.9e-12	von Willebrand factor type A domain
VWA	PF00092	199 - 314	7.3e-09	von Willebrand factor type A domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72500 AT1G72500 AT1G72500
fragaria_vesca	FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050
malus_domestica	MD09G1179800.v1.1 MD17G1165400.v1.1
prunus_persica	Prupe.3G038500_v2.0.a1 Prupe.3G038500_v2.0.a1 Prupe.3G038500_v2.0.a1
pyrus_communis	pycom09g09750 pycom17g15810
rosa_chinensis	RchiOBHm_Chr2g0146211
rosa_laevigata	RLG00000020186
rosa_multiflora	Rmu_ssc0000305.1_g000001
rosa_roxburghii	Rroxscaffold_152G00434910 Rroxscaffold_1G00024240 Rroxscaffold_1G00059690 Rroxscaffold_2G00100240 Rroxscaffold_2G00150940 Rroxscaffold_5G00356980 Rroxscaffold_7G00181760
rosa_rugosa	Rorug02G0393800
rosa_samantha	Rh2AG449800 Rh2BG462000 Rh2CG436700 Rh2DG471300
rosa_wichuraiana	Rw2G036710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1727
Acc16I	TGCGCA	1 cut(s)	1795
Acc36I	ACCTGC	1 cut(s)	1727
Acc65I	GGTACC	1 cut(s)	1283
AccB1I	GGYRCC	2 cut(s)	381, 1283
AccI	GTMKAC	1 cut(s)	1542
AccII	CGCG	1 cut(s)	116
AciI	CCGC	5 cut(s)	390, 629, 1281, 1561, 1659
AclWI	GGATC	2 cut(s)	547, 1215
AcoI	YGGCCR	1 cut(s)	864
AcuI	CTGAAG	3 cut(s)	351, 430, 1508
AcyI	GRCGYC	1 cut(s)	382
AfaI	GTAC	9 cut(s)	119, 439, 663, 823, 1285, 1387, 1472, 1726, 1774
AfeI	AGCGCT	1 cut(s)	799
AfiI	CCNNNNNNNGG	1 cut(s)	847
AflII	CTTAAG	1 cut(s)	368
AflIII	ACRYGT	1 cut(s)	114
AgsI	TTSAA	9 cut(s)	148, 164, 586, 703, 718, 1166, 1321, 1424, 1859
AjnI	CCWGG	3 cut(s)	557, 1608, 1629
AluBI	AGCT	8 cut(s)	402, 450, 713, 782, 1186, 1257, 1391, 1420
AluI	AGCT	8 cut(s)	402, 450, 713, 782, 1186, 1257, 1391, 1420
Alw26I	GTCTC	3 cut(s)	204, 627, 1438
AlwI	GGATC	2 cut(s)	547, 1215
Aor51HI	AGCGCT	1 cut(s)	799
AoxI	GGCC	3 cut(s)	82, 864, 912
ApeKI	GCWGC	5 cut(s)	425, 1070, 1634, 1709, 1820
Asp700I	GAANNNNTTC	1 cut(s)	581
Asp718I	GGTACC	1 cut(s)	1283
AspLEI	GCGC	4 cut(s)	384, 800, 1796, 1820
AspS9I	GGNCC	3 cut(s)	912, 1459, 1563
AsuC2I	CCSGG	2 cut(s)	689, 1456
AsuHPI	GGTGA	1 cut(s)	64
AsuNHI	GCTAGC	2 cut(s)	1039, 1661
AvaII	GGWCC	2 cut(s)	1459, 1563
BalI	TGGCCA	1 cut(s)	866
BanI	GGYRCC	2 cut(s)	381, 1283
BanII	GRGCYC	1 cut(s)	974
BbvI	GCAGC	5 cut(s)	437, 1057, 1621, 1696, 1807
BccI	CCATC	8 cut(s)	189, 215, 369, 809, 902, 1073, 1201, 1471
BceAI	ACGGC	1 cut(s)	899
BciT130I	CCWGG	3 cut(s)	559, 1610, 1631
BclI	TGATCA	2 cut(s)	69, 1230
BcnI	CCSGG	2 cut(s)	689, 1456
BcoDI	GTCTC	3 cut(s)	204, 627, 1438
BfaI	CTAG	5 cut(s)	23, 1040, 1476, 1662, 1728
BfmI	CTRYAG	1 cut(s)	1096
BfoI	RGCGCY	2 cut(s)	385, 801
BfrI	CTTAAG	1 cut(s)	368
BfuAI	ACCTGC	1 cut(s)	1727
BglII	AGATCT	1 cut(s)	1331
BisI	GCNGC	5 cut(s)	426, 1071, 1635, 1710, 1821
BlsI	GCNGC	5 cut(s)	427, 1072, 1636, 1711, 1822
BmcAI	AGTACT	1 cut(s)	663
Bme1390I	CCNGG	5 cut(s)	559, 689, 1456, 1610, 1631
Bme18I	GGWCC	2 cut(s)	1459, 1563
BmgT120I	GGNCC	3 cut(s)	912, 1459, 1563
BmiI	GGNNCC	6 cut(s)	172, 383, 913, 1285, 1460, 1461
BmrFI	CCNGG	5 cut(s)	559, 689, 1456, 1610, 1631
BmsI	GCATC	4 cut(s)	677, 1057, 1133, 1752
BmtI	GCTAGC	2 cut(s)	1043, 1665
BplI	GAGNNNNNCTC	2 cut(s)	1418, 1450
BpuEI	CTTGAG	2 cut(s)	662, 1202
BpuMI	CCSGG	2 cut(s)	689, 1456
BsaAI	YACGTR	1 cut(s)	733
BsaHI	GRCGYC	1 cut(s)	382
BsaI	GGTCTC	3 cut(s)	204, 627, 1438
BsaJI	CCNNGG	7 cut(s)	385, 557, 1152, 1287, 1455, 1600, 1609
BsaWI	WCCGGW	1 cut(s)	88
BsaXI	ACNNNNNCTCC	2 cut(s)	1686, 1716
Bsc4I	CCNNNNNNNGG	1 cut(s)	847
Bse1I	ACTGG	4 cut(s)	669, 1209, 1521, 1789
BseBI	CCWGG	3 cut(s)	559, 1610, 1631
BseDI	CCNNGG	7 cut(s)	385, 557, 1152, 1287, 1455, 1600, 1609
BseGI	GGATG	2 cut(s)	361, 481
BseLI	CCNNNNNNNGG	1 cut(s)	847
BseMII	CTCAG	2 cut(s)	215, 1458
BseNI	ACTGG	4 cut(s)	669, 1209, 1521, 1789
BseXI	GCAGC	5 cut(s)	437, 1057, 1621, 1696, 1807
BsgI	GTGCAG	1 cut(s)	678
Bsh1236I	CGCG	1 cut(s)	116
BshFI	GGCC	3 cut(s)	84, 866, 914
BshNI	GGYRCC	2 cut(s)	381, 1283
BsiSI	CCGG	4 cut(s)	45, 89, 688, 1455
BslFI	GGGAC	2 cut(s)	137, 1445
BslI	CCNNNNNNNGG	1 cut(s)	847
BsmAI	GTCTC	3 cut(s)	204, 627, 1438
BsmFI	GGGAC	2 cut(s)	137, 1445
BsmI	GAATGC	1 cut(s)	652
BsnI	GGCC	3 cut(s)	84, 866, 914
Bso31I	GGTCTC	3 cut(s)	204, 627, 1438
Bsp1286I	GDGCHC	1 cut(s)	974
Bsp143I	GATC	7 cut(s)	69, 552, 1207, 1230, 1331, 1351, 1738
BspACI	CCGC	5 cut(s)	390, 629, 1281, 1561, 1659
BspANI	GGCC	3 cut(s)	84, 866, 914
BspCNI	CTCAG	2 cut(s)	214, 1459
BspFNI	CGCG	1 cut(s)	116
BspHI	TCATGA	1 cut(s)	217
BspLI	GGNNCC	6 cut(s)	172, 383, 913, 1285, 1460, 1461
BspMI	ACCTGC	1 cut(s)	1727
BspOI	GCTAGC	2 cut(s)	1043, 1665
BspPI	GGATC	2 cut(s)	547, 1215
BspT107I	GGYRCC	2 cut(s)	381, 1283
BspTI	CTTAAG	1 cut(s)	368
BspTNI	GGTCTC	3 cut(s)	204, 627, 1438
BsrI	ACTGG	4 cut(s)	669, 1209, 1521, 1789
BssECI	CCNNGG	7 cut(s)	385, 557, 1152, 1287, 1455, 1600, 1609
BssMI	GATC	7 cut(s)	69, 552, 1207, 1230, 1331, 1351, 1738
BssNI	GRCGYC	1 cut(s)	382
BssT1I	CCWWGG	3 cut(s)	385, 1287, 1600
Bst2UI	CCWGG	3 cut(s)	559, 1610, 1631
Bst4CI	ACNGT	4 cut(s)	241, 463, 1153, 1642
Bst6I	CTCTTC	2 cut(s)	516, 1419
BstACI	GRCGYC	1 cut(s)	382
BstAFI	CTTAAG	1 cut(s)	368
BstAPI	GCANNNNNTGC	2 cut(s)	656, 1749
BstBAI	YACGTR	1 cut(s)	733
BstC8I	GCNNGC	3 cut(s)	1041, 1362, 1663
BstDEI	CTNAG	5 cut(s)	201, 783, 842, 1335, 1467
BstDSI	CCRYGG	1 cut(s)	1152
BstEII	GGTNACC	1 cut(s)	1625
BstENI	CCTNNNNNAGG	1 cut(s)	845
BstF5I	GGATG	2 cut(s)	361, 481
BstFNI	CGCG	1 cut(s)	116
BstH2I	RGCGCY	2 cut(s)	385, 801
BstHHI	GCGC	4 cut(s)	384, 800, 1796, 1820
BstKTI	GATC	7 cut(s)	72, 555, 1210, 1233, 1334, 1354, 1741
BstMAI	GTCTC	3 cut(s)	204, 627, 1438
BstMBI	GATC	7 cut(s)	69, 552, 1207, 1230, 1331, 1351, 1738
BstMWI	GCNNNNNNNGC	7 cut(s)	113, 422, 626, 656, 665, 872, 1749
BstNI	CCWGG	3 cut(s)	559, 1610, 1631
BstNSI	RCATGY	2 cut(s)	1384, 1756
BstPI	GGTNACC	1 cut(s)	1625
BstSCI	CCNGG	5 cut(s)	557, 687, 1454, 1608, 1629
BstSFI	CTRYAG	1 cut(s)	1096
BstUI	CGCG	1 cut(s)	116
BstV1I	GCAGC	5 cut(s)	437, 1057, 1621, 1696, 1807
BstX2I	RGATCY	2 cut(s)	1207, 1331
BstYI	RGATCY	2 cut(s)	1207, 1331
BsuRI	GGCC	3 cut(s)	84, 866, 914
BtgI	CCRYGG	1 cut(s)	1152
BtgZI	GCGATG	1 cut(s)	654
BtsCI	GGATG	2 cut(s)	361, 481
BtsIMutI	CAGTG	5 cut(s)	237, 1137, 1484, 1514, 1796
BveI	ACCTGC	1 cut(s)	1727
Cac8I	GCNNGC	3 cut(s)	1041, 1362, 1663
CciI	TCATGA	1 cut(s)	217
CfoI	GCGC	4 cut(s)	384, 800, 1796, 1820
Cfr13I	GGNCC	3 cut(s)	912, 1459, 1563
CseI	GACGC	2 cut(s)	122, 1166
Csp6I	GTAC	9 cut(s)	118, 438, 662, 822, 1284, 1386, 1471, 1725, 1773
CviAII	CATG	7 cut(s)	218, 429, 1381, 1394, 1398, 1480, 1753
CviQI	GTAC	9 cut(s)	118, 438, 662, 822, 1284, 1386, 1471, 1725, 1773
DdeI	CTNAG	5 cut(s)	201, 783, 842, 1335, 1467
DinI	GGCGCC	1 cut(s)	383
DpnI	GATC	7 cut(s)	71, 554, 1209, 1232, 1333, 1353, 1740
DpnII	GATC	7 cut(s)	69, 552, 1207, 1230, 1331, 1351, 1738
EaeI	YGGCCR	1 cut(s)	864
Eam1104I	CTCTTC	2 cut(s)	516, 1419
EarI	CTCTTC	2 cut(s)	516, 1419
Eco130I	CCWWGG	3 cut(s)	385, 1287, 1600
Eco24I	GRGCYC	1 cut(s)	974
Eco31I	GGTCTC	3 cut(s)	204, 627, 1438
Eco32I	GATATC	1 cut(s)	956
Eco47I	GGWCC	2 cut(s)	1459, 1563
Eco47III	AGCGCT	1 cut(s)	799
Eco57I	CTGAAG	3 cut(s)	351, 430, 1508
Eco91I	GGTNACC	1 cut(s)	1625
EcoNI	CCTNNNNNAGG	1 cut(s)	845
EcoO109I	RGGNCCY	1 cut(s)	1459
EcoO65I	GGTNACC	1 cut(s)	1625
EcoRII	CCWGG	3 cut(s)	557, 1608, 1629
EcoRV	GATATC	1 cut(s)	956
EcoT14I	CCWWGG	3 cut(s)	385, 1287, 1600
EcoT22I	ATGCAT	1 cut(s)	1399
EcoT38I	GRGCYC	1 cut(s)	974
EgeI	GGCGCC	1 cut(s)	383
EheI	GGCGCC	1 cut(s)	383
ErhI	CCWWGG	3 cut(s)	385, 1287, 1600
FaeI	CATG	7 cut(s)	221, 432, 1384, 1397, 1401, 1483, 1756
FaqI	GGGAC	2 cut(s)	137, 1445
FatI	CATG	7 cut(s)	217, 428, 1380, 1393, 1397, 1479, 1752
FauI	CCCGC	2 cut(s)	622, 1666
FauNDI	CATATG	2 cut(s)	262, 409
FbaI	TGATCA	2 cut(s)	69, 1230
FblI	GTMKAC	1 cut(s)	1542
Fnu4HI	GCNGC	5 cut(s)	426, 1071, 1635, 1710, 1821
FokI	GGATG	2 cut(s)	348, 488
FriOI	GRGCYC	1 cut(s)	974
Fsp4HI	GCNGC	5 cut(s)	426, 1071, 1635, 1710, 1821
FspBI	CTAG	5 cut(s)	23, 1040, 1476, 1662, 1728
FspI	TGCGCA	1 cut(s)	1795
GlaI	GCGC	4 cut(s)	383, 799, 1795, 1819
GluI	GCNGC	5 cut(s)	426, 1071, 1635, 1710, 1821
HaeII	RGCGCY	2 cut(s)	385, 801
HaeIII	GGCC	3 cut(s)	84, 866, 914
HapII	CCGG	4 cut(s)	45, 89, 688, 1455
HgaI	GACGC	2 cut(s)	122, 1166
HhaI	GCGC	4 cut(s)	384, 800, 1796, 1820
Hin1I	GRCGYC	1 cut(s)	382
Hin1II	CATG	7 cut(s)	221, 432, 1384, 1397, 1401, 1483, 1756
Hin6I	GCGC	4 cut(s)	382, 798, 1794, 1818
HinP1I	GCGC	4 cut(s)	382, 798, 1794, 1818
HincII	GTYRAC	1 cut(s)	466
HindII	GTYRAC	1 cut(s)	466
HindIII	AAGCTT	1 cut(s)	1255
HinfI	GANTC	6 cut(s)	61, 1085, 1135, 1175, 1574, 1695
HpaI	GTTAAC	1 cut(s)	466
HpaII	CCGG	4 cut(s)	45, 89, 688, 1455
HphI	GGTGA	1 cut(s)	64
Hpy166II	GTNNAC	6 cut(s)	17, 466, 730, 1156, 1473, 1543
Hpy188III	TCNNGA	7 cut(s)	218, 515, 641, 1172, 1218, 1645, 1869
Hpy8I	GTNNAC	6 cut(s)	17, 466, 730, 1156, 1473, 1543
Hpy99I	CGWCG	1 cut(s)	920
HpyAV	CCTTC	9 cut(s)	4, 74, 154, 158, 184, 571, 1423, 1582, 1689
HpyCH4III	ACNGT	4 cut(s)	241, 463, 1153, 1642
HpyCH4IV	ACGT	3 cut(s)	130, 732, 1779
HpyF10VI	GCNNNNNNNGC	7 cut(s)	113, 422, 626, 656, 665, 872, 1749
HpyF3I	CTNAG	5 cut(s)	201, 783, 842, 1335, 1467
HpySE526I	ACGT	3 cut(s)	130, 732, 1779
Hsp92I	GRCGYC	1 cut(s)	382
Hsp92II	CATG	7 cut(s)	221, 432, 1384, 1397, 1401, 1483, 1756
HspAI	GCGC	4 cut(s)	382, 798, 1794, 1818
KasI	GGCGCC	1 cut(s)	381
KflI	GGGWCCC	1 cut(s)	1459
KpnI	GGTACC	1 cut(s)	1287
Ksp22I	TGATCA	2 cut(s)	69, 1230
KspAI	GTTAAC	1 cut(s)	466
Kzo9I	GATC	7 cut(s)	69, 552, 1207, 1230, 1331, 1351, 1738
LmnI	GCTCC	1 cut(s)	176
Lsp1109I	GCAGC	5 cut(s)	437, 1057, 1621, 1696, 1807
LweI	GCATC	4 cut(s)	677, 1057, 1133, 1752
MaeI	CTAG	5 cut(s)	23, 1040, 1476, 1662, 1728
MaeII	ACGT	3 cut(s)	130, 732, 1779
MaeIII	GTNAC	4 cut(s)	131, 831, 1132, 1625
MalI	GATC	7 cut(s)	71, 554, 1209, 1232, 1333, 1353, 1740
MboI	GATC	7 cut(s)	69, 552, 1207, 1230, 1331, 1351, 1738
MboII	GAAGA	6 cut(s)	313, 503, 704, 932, 1436, 1679
MfeI	CAATTG	1 cut(s)	1089
MflI	RGATCY	2 cut(s)	1207, 1331
MhlI	GDGCHC	1 cut(s)	974
MlsI	TGGCCA	1 cut(s)	866
MluI	ACGCGT	1 cut(s)	114
MluNI	TGGCCA	1 cut(s)	866
Mly113I	GGCGCC	1 cut(s)	382
MlyI	GAGTC	5 cut(s)	55, 1094, 1129, 1583, 1704
MmeI	TCCRAC	3 cut(s)	77, 530, 1551
Mox20I	TGGCCA	1 cut(s)	866
Mph1103I	ATGCAT	1 cut(s)	1399
MroXI	GAANNNNTTC	1 cut(s)	581
MscI	TGGCCA	1 cut(s)	866
MseI	TTAA	9 cut(s)	249, 267, 369, 465, 1272, 1523, 1704, 1782, 1844
MslI	CAYNNNNRTG	1 cut(s)	1478
Msp20I	TGGCCA	1 cut(s)	866
MspA1I	CMGCKG	1 cut(s)	1561
MspCI	CTTAAG	1 cut(s)	368
MspI	CCGG	4 cut(s)	45, 89, 688, 1455
MspR9I	CCNGG	5 cut(s)	559, 689, 1456, 1610, 1631
MunI	CAATTG	1 cut(s)	1089
Mva1269I	GAATGC	1 cut(s)	652
MvaI	CCWGG	3 cut(s)	559, 1610, 1631
MvnI	CGCG	1 cut(s)	116
MwoI	GCNNNNNNNGC	7 cut(s)	113, 422, 626, 656, 665, 872, 1749
NarI	GGCGCC	1 cut(s)	382
NciI	CCSGG	2 cut(s)	689, 1456
NdeI	CATATG	2 cut(s)	262, 409
NdeII	GATC	7 cut(s)	69, 552, 1207, 1230, 1331, 1351, 1738
NheI	GCTAGC	2 cut(s)	1039, 1661
NlaIII	CATG	7 cut(s)	221, 432, 1384, 1397, 1401, 1483, 1756
NlaIV	GGNNCC	6 cut(s)	172, 383, 913, 1285, 1460, 1461
NmuCI	GTSAC	2 cut(s)	131, 1132
NsbI	TGCGCA	1 cut(s)	1795
NsiI	ATGCAT	1 cut(s)	1399
NspI	RCATGY	2 cut(s)	1384, 1756
PagI	TCATGA	1 cut(s)	217
PaqCI	CACCTGC	1 cut(s)	1727
PctI	GAATGC	1 cut(s)	652
PdmI	GAANNNNTTC	1 cut(s)	581
PfeI	GAWTC	1 cut(s)	1175
PflFI	GACNNNGTC	1 cut(s)	1567
PkrI	GCNGC	5 cut(s)	427, 1072, 1636, 1711, 1822
PleI	GAGTC	5 cut(s)	55, 1093, 1129, 1582, 1703
PluTI	GGCGCC	1 cut(s)	385
PpsI	GAGTC	5 cut(s)	55, 1093, 1129, 1582, 1703
Ppu21I	YACGTR	1 cut(s)	733
PpuMI	RGGWCCY	1 cut(s)	1459
Psp5II	RGGWCCY	1 cut(s)	1459
Psp6I	CCWGG	3 cut(s)	557, 1608, 1629
PspEI	GGTNACC	1 cut(s)	1625
PspGI	CCWGG	3 cut(s)	557, 1608, 1629
PspN4I	GGNNCC	6 cut(s)	172, 383, 913, 1285, 1460, 1461
PspPI	GGNCC	3 cut(s)	912, 1459, 1563
PspPPI	RGGWCCY	1 cut(s)	1459
PsuI	RGATCY	2 cut(s)	1207, 1331
PsyI	GACNNNGTC	1 cut(s)	1567
RsaI	GTAC	9 cut(s)	119, 439, 663, 823, 1285, 1387, 1472, 1726, 1774
RsaNI	GTAC	9 cut(s)	118, 438, 662, 822, 1284, 1386, 1471, 1725, 1773
RseI	CAYNNNNRTG	1 cut(s)	1478
SaqAI	TTAA	9 cut(s)	249, 267, 369, 465, 1272, 1523, 1704, 1782, 1844
SatI	GCNGC	5 cut(s)	426, 1071, 1635, 1710, 1821
Sau3AI	GATC	7 cut(s)	69, 552, 1207, 1230, 1331, 1351, 1738
Sau96I	GGNCC	3 cut(s)	912, 1459, 1563
ScaI	AGTACT	1 cut(s)	663
SchI	GAGTC	5 cut(s)	55, 1094, 1129, 1583, 1704
ScrFI	CCNGG	5 cut(s)	559, 689, 1456, 1610, 1631
SduI	GDGCHC	1 cut(s)	974
SfaNI	GCATC	4 cut(s)	677, 1057, 1133, 1752
SfcI	CTRYAG	1 cut(s)	1096
SfoI	GGCGCC	1 cut(s)	383
SinI	GGWCC	2 cut(s)	1459, 1563
SmiMI	CAYNNNNRTG	1 cut(s)	1478
SmlI	CTYRAG	3 cut(s)	368, 641, 1181
SmoI	CTYRAG	3 cut(s)	368, 641, 1181
SsiI	CCGC	5 cut(s)	390, 629, 1281, 1561, 1659
SspDI	GGCGCC	1 cut(s)	381
SspMI	CTAG	5 cut(s)	23, 1040, 1476, 1662, 1728
StyD4I	CCNGG	5 cut(s)	557, 687, 1454, 1608, 1629
StyI	CCWWGG	3 cut(s)	385, 1287, 1600
TaaI	ACNGT	4 cut(s)	241, 463, 1153, 1642
TaiI	ACGT	3 cut(s)	133, 735, 1782
TaqI	TCGA	4 cut(s)	918, 985, 1173, 1644
TatI	WGTACW	4 cut(s)	437, 661, 1470, 1724
TfiI	GAWTC	1 cut(s)	1175
Tru1I	TTAA	9 cut(s)	249, 267, 369, 465, 1272, 1523, 1704, 1782, 1844
Tru9I	TTAA	9 cut(s)	249, 267, 369, 465, 1272, 1523, 1704, 1782, 1844
TscAI	CASTG	5 cut(s)	244, 1137, 1491, 1521, 1796
TseFI	GTSAC	2 cut(s)	131, 1132
TseI	GCWGC	5 cut(s)	425, 1070, 1634, 1709, 1820
Tsp45I	GTSAC	2 cut(s)	131, 1132
TspRI	CASTG	5 cut(s)	244, 1137, 1491, 1521, 1796
Tth111I	GACNNNGTC	1 cut(s)	1567
Vha464I	CTTAAG	1 cut(s)	368
VpaK11BI	GGWCC	2 cut(s)	1459, 1563
XagI	CCTNNNNNAGG	1 cut(s)	845
XceI	RCATGY	2 cut(s)	1384, 1756
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1150
XmiI	GTMKAC	1 cut(s)	1542
XmnI	GAANNNNTTC	1 cut(s)	581
XspI	CTAG	5 cut(s)	23, 1040, 1476, 1662, 1728
ZrmI	AGTACT	1 cut(s)	663
Zsp2I	ATGCAT	1 cut(s)	1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.