Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004111

Physical Location & Seq

Genomic Coordinates Reverse (-)

2776564 .. 2781983

Gene Structure 5420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G038500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGGCCGCCGAGTTCTCCAGCTGCGTCGAGTACGGCCTCGGGCTCTCGAAGCGGGTGTTCTACGGCAAAGAGTCGGTTCCAGACCCGTCGGCGATGACCAGGTCGTCGGAGTCGTACTTGCCGGAGGCTCCGATGGTATACGCGGTCGTACCCGACCCCTCAGTCGTGGATAATCCGGACATTCCGAGCTACCAGCCGTACGTTCACGGCATGTGTGAGCCGCCGGCTTTGATACCTCTGCATATGCATGGGATAGCTATGGAAATCGAGAGCTATTTGGACACTGCGTTCGTTACTGTGAACGGCACGTGGCGCGTGCATTGTGTTTCCGCGGGAAAGAGGTGCGATTGTCGCGTCGCGGTACCGATGGGCGATAAGGGTTCACTTCTAGGTGTTGAGGCTGAAATTACCGGAAGATCATATAGTACTCAACTAATCACAGCAGAAGACACAACAAATAAGGAGAAAGTGGCCAAAGATGGGTACTTTCTGAAACGCCAGATATACACCCTAAAAGTCCCACAGATTGACGGAGGCTCCTTCCTTTCATTCAAAATTCGATGGTCTCAGAAATTGTTGTATCACGCTGGCCAGTTTTCCCTCAGTATACCTTTTAGTTTTCCAGCATGTGTCAATCCCGTGTCGAAAAAAAATGTGAAAGGAGAAAAGATTTTGTTGAATGTGAATACGGGTATTGACGCAGAAGTTTTATGCCAAAGTACCAGCCATCCTCTTAAGGAAGTTAGGCGCCAAAGTGGTAGATTGAGTTTTTCATATGAAGCAGAGGTATCATCATGGTCAAGTGCAGGCTTCAGCTTTTCATACACTGTTTGTTCAAGTGACTTATTTGGTGGTGTGCTTTTGCAATCCCCATCACTTCGTGATTTTGACGATAGAGAGATGTTTTGCTTCTATCTATTCCCCGGAAATAGCCAGACTAGGAAGGTTTTCAAAAAGGAAGTTATATTTATTATTGATATAAGTGGAAGCATGCTGGGAGACCCTCTTGAAAATGCAAAGAATGCACTATTGGCGTCACTCTCTAATCTCAACCGAGATGATACTTTCAACATTATAGCTTTCAATGGAGAGGTTCACTTATTCTCAGCATCAATGGAGCTGGCAACAAATGAAGCAATGCTAAAAGCTAAGGAGTGGGCTAGCACTAATCTTACTGCAAATGGTGGTACAAATATCTTGCTTCCCCTCAAACAGGCTATGCAGTTGTTGGCCAAAACCAGTGATTCAATTCCTTTCATTTTCCTCATTACTGATGGGGCTGTTGAAGATGAAAGGGAGATTTGCACTATTATGAAAGGTTACCTTACAAGTGCTGGTTCGGTTTGTCCTCGCATATCTACTTTTGGCATAGGTTTATATTGTAATCATTACTTCCTGCAAATGCTAGCCCAAATTGGGAGGGGTTACTATGATGCTGCTTATGATGCAGATTCAATTGACTACAAAATGCAAAGGCTATTCACAAGTGCTTCATCAGTGATTCTTGCCAATATAACCATCGACGCTTTAGAATGTCTCGATTCGCTTGAGCTGTTTCCATCTCATATCCCAGACCTTTCATCTGGGAGTCCATTGATCATATCAGGCAGATATGAGGGAAGTTTTCCCGACTCCATCAAAGTTCGTGGTACCTTGGCTGATATGAGTAATTTTGTCATAGACTTGAAAGTACAAAGATCCAAGGAATTTCCACTTGATCGGGTGCTTGCGAGAAGGCACATTGACATGCTTACAGCTCATGCCTGGTTATTGGGAAGTAAAGAGCTGGAAGAGAAGGTTTCCAAAATGAGCAAACAAACCGGGGTCCCATCTGAGTACACTTGCATGATACTAGTGCAGAGTCTGCAGACTGATAACGGGAAGAGGGTGCCGGAATCCGTTACGATACAAGGGGTCTACAACAAATTTACCCAGCTGAACAAGACGGAGTCAAATCGCCAGAAGGTCATAGTCCTCGGAAACCTGGGTGTTGGGTTCGGTAACTTGAAGGCAACGGTTGAGAATAAAGCACCGGCAAGCGAAGAAGTAAAGCCAGCTGATCCAACGGAGCTCTTGTTTAAGGCTGCTTCCAACTGCTGTAGCCAAGTACTTGATCGCGTCTGTTGCATGTGTTTCATTAGGACTTGTTCACACATGAACAACCAGTGTGCAATTCTTCTTACGCAAGTCTGCGCTGCCCTTGCTTGTTTTGAGTGCATCAATTGTTGCTTTGAATTATTTTCAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA_3

Protein Analysis

750

Amino Acids

82.49

Weight (kDa)

5.77

Isoelectric Point (pI)

42.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72500 AT1G72500 AT1G72500
fragaria_vesca	FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050
malus_domestica	MD09G1179800.v1.1 MD17G1165400.v1.1
prunus_persica	Prupe.3G038500_v2.0.a1 Prupe.3G038500_v2.0.a1 Prupe.3G038500_v2.0.a1
pyrus_communis	pycom09g09750 pycom17g15810
rosa_chinensis	RchiOBHm_Chr2g0146211
rosa_laevigata	RLG00000020186
rosa_multiflora	Rmu_ssc0000305.1_g000001
rosa_roxburghii	Rroxscaffold_152G00434910 Rroxscaffold_1G00024240 Rroxscaffold_1G00059690 Rroxscaffold_2G00100240 Rroxscaffold_2G00150940 Rroxscaffold_5G00356980 Rroxscaffold_7G00181760
rosa_rugosa	Rorug02G0393800
rosa_samantha	Rh2AG449800 Rh2BG462000 Rh2CG436700 Rh2DG471300
rosa_wichuraiana	Rw2G036710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	103, 161
Acc65I	GGTACC	2 cut(s)	361, 1649
AccB1I	GGYRCC	4 cut(s)	361, 747, 1649, 1888
AccI	GTMKAC	3 cut(s)	138, 607, 1917
AccII	CGCG	6 cut(s)	143, 315, 332, 354, 359, 2118
AccIII	TCCGGA	1 cut(s)	175
AciI	CCGC	7 cut(s)	6, 52, 143, 221, 330, 332, 359
AclWI	GGATC	2 cut(s)	1692, 2054
AcoI	YGGCCR	4 cut(s)	3, 471, 589, 1230
AcsI	RAATTY	3 cut(s)	555, 1706, 1925
AcuI	CTGAAG	1 cut(s)	796
AcvI	CACGTG	1 cut(s)	309
AcyI	GRCGYC	2 cut(s)	748, 1034
AdeI	CACNNNGTG	1 cut(s)	881
AfiI	CCNNNNNNNGG	3 cut(s)	480, 1213, 1416
AflII	CTTAAG	1 cut(s)	734
AhlI	ACTAGT	1 cut(s)	1852
AjnI	CCWGG	3 cut(s)	98, 1763, 1983
AjuI	GAANNNNNNNTTGG	2 cut(s)	1013, 1045
AloI	GAACNNNNNNTCC	2 cut(s)	272, 304
Alw21I	GWGCWC	1 cut(s)	2073
Alw26I	GTCTC	3 cut(s)	570, 993, 1541
AlwI	GGATC	2 cut(s)	1692, 2054
AlwNI	CAGNNNCTG	1 cut(s)	1864
Ama87I	CYCGRG	1 cut(s)	38
Aor13HI	TCCGGA	1 cut(s)	175
AoxI	GGCC	5 cut(s)	3, 34, 471, 589, 1230
ApeKI	GCWGC	4 cut(s)	21, 1436, 2084, 2195
ApoI	RAATTY	3 cut(s)	555, 1706, 1925
ArsI	GACNNNNNNTTYG	2 cut(s)	272, 304
Asp700I	GAANNNNTTC	1 cut(s)	947
Asp718I	GGTACC	2 cut(s)	361, 1649
AspLEI	GCGC	3 cut(s)	315, 750, 2195
AspS9I	GGNCC	1 cut(s)	1825
AsuC2I	CCSGG	2 cut(s)	924, 1822
AsuNHI	GCTAGC	2 cut(s)	1160, 1405
AvaI	CYCGRG	1 cut(s)	38
AvaII	GGWCC	1 cut(s)	1825
BalI	TGGCCA	3 cut(s)	473, 591, 1232
BanI	GGYRCC	4 cut(s)	361, 747, 1649, 1888
BanII	GRGCYC	2 cut(s)	45, 2073
BbrPI	CACGTG	1 cut(s)	309
BbsI	GAAGAC	1 cut(s)	453
Bbv12I	GWGCWC	1 cut(s)	2073
BbvI	GCAGC	4 cut(s)	8, 1423, 2071, 2182
BceAI	ACGGC	5 cut(s)	49, 79, 181, 223, 319
BciT130I	CCWGG	3 cut(s)	100, 1765, 1985
BclI	TGATCA	1 cut(s)	1596
BcnI	CCSGG	2 cut(s)	924, 1822
BcoDI	GTCTC	3 cut(s)	570, 993, 1541
BcuI	ACTAGT	1 cut(s)	1852
BfaI	CTAG	5 cut(s)	389, 939, 1161, 1406, 1853
BfmI	CTRYAG	2 cut(s)	1865, 2098
BfoI	RGCGCY	1 cut(s)	751
BfrI	CTTAAG	1 cut(s)	734
BisI	GCNGC	6 cut(s)	6, 22, 221, 1437, 2085, 2196
BlsI	GCNGC	6 cut(s)	7, 23, 222, 1438, 2086, 2197
BmcAI	AGTACT	2 cut(s)	427, 2109
Bme1390I	CCNGG	5 cut(s)	100, 924, 1765, 1822, 1985
Bme18I	GGWCC	1 cut(s)	1825
BmeT110I	CYCGRG	1 cut(s)	38
BmgT120I	GGNCC	1 cut(s)	1825
BmiI	GGNNCC	9 cut(s)	78, 129, 363, 538, 749, 1651, 1826, 1827, 1890
BmrFI	CCNGG	5 cut(s)	100, 924, 1765, 1822, 1985
BmsI	GCATC	4 cut(s)	1118, 1423, 1435, 2226
BmtI	GCTAGC	2 cut(s)	1164, 1409
BpiI	GAAGAC	1 cut(s)	453
Bpu10I	CCTNAGC	1 cut(s)	1149
BpuEI	CTTGAG	1 cut(s)	1568
BpuMI	CCSGG	2 cut(s)	924, 1822
BsaAI	YACGTR	1 cut(s)	309
BsaHI	GRCGYC	2 cut(s)	748, 1034
BsaI	GGTCTC	2 cut(s)	570, 993
BsaJI	CCNNGG	8 cut(s)	37, 330, 922, 1653, 1701, 1821, 1975, 1984
BsaWI	WCCGGW	2 cut(s)	175, 410
BsaXI	ACNNNNNCTCC	4 cut(s)	521, 551, 2060, 2090
Bsc4I	CCNNNNNNNGG	3 cut(s)	480, 1213, 1416
Bse118I	RCCGGY	2 cut(s)	223, 2032
Bse1I	ACTGG	3 cut(s)	592, 1239, 2164
Bse3DI	GCAATG	1 cut(s)	1143
BseAI	TCCGGA	1 cut(s)	175
BseBI	CCWGG	3 cut(s)	100, 1765, 1985
BseDI	CCNNGG	8 cut(s)	37, 330, 922, 1653, 1701, 1821, 1975, 1984
BseGI	GGATG	1 cut(s)	727
BseLI	CCNNNNNNNGG	3 cut(s)	480, 1213, 1416
BseMI	GCAATG	1 cut(s)	1143
BseMII	CTCAG	5 cut(s)	174, 581, 616, 1119, 1824
BseNI	ACTGG	3 cut(s)	592, 1239, 2164
BseXI	GCAGC	4 cut(s)	8, 1423, 2071, 2182
BseYI	CCCAGC	2 cut(s)	994, 1932
BsgI	GTGCAG	2 cut(s)	825, 1877
Bsh1236I	CGCG	6 cut(s)	143, 315, 332, 354, 359, 2118
Bsh1285I	CGRYCG	1 cut(s)	147
BshFI	GGCC	5 cut(s)	5, 36, 473, 591, 1232
BshNI	GGYRCC	4 cut(s)	361, 747, 1649, 1888
BsiEI	CGRYCG	1 cut(s)	147
BsiHKAI	GWGCWC	1 cut(s)	2073
BsiHKCI	CYCGRG	1 cut(s)	38
BsiSI	CCGG	8 cut(s)	122, 176, 224, 411, 924, 1821, 1892, 2033
BsiWI	CGTACG	1 cut(s)	198
BslFI	GGGAC	2 cut(s)	503, 1811
BslI	CCNNNNNNNGG	3 cut(s)	480, 1213, 1416
BsmAI	GTCTC	3 cut(s)	570, 993, 1541
BsmFI	GGGAC	2 cut(s)	503, 1811
BsmI	GAATGC	1 cut(s)	1027
BsnI	GGCC	5 cut(s)	5, 36, 473, 591, 1232
Bso31I	GGTCTC	2 cut(s)	570, 993
BsoBI	CYCGRG	1 cut(s)	38
Bsp1286I	GDGCHC	2 cut(s)	45, 2073
Bsp13I	TCCGGA	1 cut(s)	175
Bsp143I	GATC	6 cut(s)	416, 1596, 1697, 1717, 2059, 2113
BspACI	CCGC	7 cut(s)	6, 52, 143, 221, 330, 332, 359
BspANI	GGCC	5 cut(s)	5, 36, 473, 591, 1232
BspCNI	CTCAG	5 cut(s)	173, 580, 615, 1118, 1825
BspEI	TCCGGA	1 cut(s)	175
BspFNI	CGCG	6 cut(s)	143, 315, 332, 354, 359, 2118
BspLI	GGNNCC	9 cut(s)	78, 129, 363, 538, 749, 1651, 1826, 1827, 1890
BspMAI	CTGCAG	1 cut(s)	1869
BspOI	GCTAGC	2 cut(s)	1164, 1409
BspPI	GGATC	2 cut(s)	1692, 2054
BspT107I	GGYRCC	4 cut(s)	361, 747, 1649, 1888
BspTI	CTTAAG	1 cut(s)	734
BspTNI	GGTCTC	2 cut(s)	570, 993
BsrDI	GCAATG	1 cut(s)	1143
BsrFI	RCCGGY	2 cut(s)	223, 2032
BsrI	ACTGG	3 cut(s)	592, 1239, 2164
BssAI	RCCGGY	2 cut(s)	223, 2032
BssECI	CCNNGG	8 cut(s)	37, 330, 922, 1653, 1701, 1821, 1975, 1984
BssMI	GATC	6 cut(s)	416, 1596, 1697, 1717, 2059, 2113
BssNAI	GTATAC	2 cut(s)	139, 608
BssNI	GRCGYC	2 cut(s)	748, 1034
BssT1I	CCWWGG	2 cut(s)	1653, 1701
Bst1107I	GTATAC	2 cut(s)	139, 608
Bst2UI	CCWGG	3 cut(s)	100, 1765, 1985
Bst4CI	ACNGT	3 cut(s)	298, 829, 2017
Bst6I	CTCTTC	2 cut(s)	1785, 1877
BstACI	GRCGYC	2 cut(s)	748, 1034
BstAFI	CTTAAG	1 cut(s)	734
BstAPI	GCANNNNNTGC	2 cut(s)	1022, 1864
BstBAI	YACGTR	1 cut(s)	309
BstDEI	CTNAG	6 cut(s)	160, 567, 602, 1105, 1149, 1833
BstDSI	CCRYGG	1 cut(s)	330
BstEII	GGTNACC	1 cut(s)	1319
BstENI	CCTNNNNNAGG	1 cut(s)	1211
BstF5I	GGATG	1 cut(s)	727
BstFNI	CGCG	6 cut(s)	143, 315, 332, 354, 359, 2118
BstH2I	RGCGCY	1 cut(s)	751
BstHHI	GCGC	3 cut(s)	315, 750, 2195
BstKTI	GATC	6 cut(s)	419, 1599, 1700, 1720, 2062, 2116
BstMAI	GTCTC	3 cut(s)	570, 993, 1541
BstMBI	GATC	6 cut(s)	416, 1596, 1697, 1717, 2059, 2113
BstMCI	CGRYCG	1 cut(s)	147
BstMWI	GCNNNNNNNGC	9 cut(s)	49, 312, 351, 1022, 1031, 1445, 1864, 2124, 2201
BstNI	CCWGG	3 cut(s)	100, 1765, 1985
BstNSI	RCATGY	5 cut(s)	214, 630, 994, 1750, 2131
BstPI	GGTNACC	1 cut(s)	1319
BstSCI	CCNGG	5 cut(s)	98, 922, 1763, 1820, 1983
BstSFI	CTRYAG	2 cut(s)	1865, 2098
BstUI	CGCG	6 cut(s)	143, 315, 332, 354, 359, 2118
BstV1I	GCAGC	4 cut(s)	8, 1423, 2071, 2182
BstV2I	GAAGAC	1 cut(s)	453
BstX2I	RGATCY	1 cut(s)	1697
BstYI	RGATCY	1 cut(s)	1697
BstZ17I	GTATAC	2 cut(s)	139, 608
BsuRI	GGCC	5 cut(s)	5, 36, 473, 591, 1232
BtgI	CCRYGG	1 cut(s)	330
BtgZI	GCGATG	1 cut(s)	107
BtsCI	GGATG	1 cut(s)	727
BtsI	GCAGTG	1 cut(s)	282
BtsIMutI	CAGTG	5 cut(s)	282, 825, 1246, 1503, 2171
CaiI	CAGNNNCTG	1 cut(s)	1864
CfoI	GCGC	3 cut(s)	315, 750, 2195
Cfr10I	RCCGGY	2 cut(s)	223, 2032
Cfr13I	GGNCC	1 cut(s)	1825
Cfr42I	CCGCGG	1 cut(s)	333
CseI	GACGC	6 cut(s)	13, 343, 707, 1023, 1532, 2107
CsiI	ACCWGGT	1 cut(s)	98
CspCI	CAANNNNNGTGG	2 cut(s)	1627, 1662
DdeI	CTNAG	6 cut(s)	160, 567, 602, 1105, 1149, 1833
DinI	GGCGCC	1 cut(s)	749
DpnI	GATC	6 cut(s)	418, 1598, 1699, 1719, 2061, 2115
DpnII	GATC	6 cut(s)	416, 1596, 1697, 1717, 2059, 2113
DraIII	CACNNNGTG	1 cut(s)	881
DrdI	GACNNNNNNGTC	2 cut(s)	103, 161
DseDI	GACNNNNNNGTC	2 cut(s)	103, 161
EaeI	YGGCCR	4 cut(s)	3, 471, 589, 1230
Eam1104I	CTCTTC	2 cut(s)	1785, 1877
EarI	CTCTTC	2 cut(s)	1785, 1877
Ecl136II	GAGCTC	1 cut(s)	2071
Eco130I	CCWWGG	2 cut(s)	1653, 1701
Eco24I	GRGCYC	2 cut(s)	45, 2073
Eco31I	GGTCTC	2 cut(s)	570, 993
Eco47I	GGWCC	1 cut(s)	1825
Eco53kI	GAGCTC	1 cut(s)	2071
Eco57I	CTGAAG	1 cut(s)	796
Eco72I	CACGTG	1 cut(s)	309
Eco88I	CYCGRG	1 cut(s)	38
Eco91I	GGTNACC	1 cut(s)	1319
EcoICRI	GAGCTC	1 cut(s)	2071
EcoNI	CCTNNNNNAGG	1 cut(s)	1211
EcoO109I	RGGNCCY	1 cut(s)	1825
EcoO65I	GGTNACC	1 cut(s)	1319
EcoRII	CCWGG	3 cut(s)	98, 1763, 1983
EcoT14I	CCWWGG	2 cut(s)	1653, 1701
EcoT22I	ATGCAT	1 cut(s)	249
EcoT38I	GRGCYC	2 cut(s)	45, 2073
EgeI	GGCGCC	1 cut(s)	749
EheI	GGCGCC	1 cut(s)	749
ErhI	CCWWGG	2 cut(s)	1653, 1701
FalI	AAGNNNNNCTT	2 cut(s)	1308, 1340
FaqI	GGGAC	2 cut(s)	503, 1811
FauI	CCCGC	2 cut(s)	45, 325
FauNDI	CATATG	2 cut(s)	243, 775
FbaI	TGATCA	1 cut(s)	1596
FblI	GTMKAC	3 cut(s)	138, 607, 1917
Fnu4HI	GCNGC	6 cut(s)	6, 22, 221, 1437, 2085, 2196
FokI	GGATG	1 cut(s)	714
FriOI	GRGCYC	2 cut(s)	45, 2073
Fsp4HI	GCNGC	6 cut(s)	6, 22, 221, 1437, 2085, 2196
FspBI	CTAG	5 cut(s)	389, 939, 1161, 1406, 1853
GlaI	GCGC	3 cut(s)	314, 749, 2194
GluI	GCNGC	6 cut(s)	6, 22, 221, 1437, 2085, 2196
GsaI	CCCAGC	2 cut(s)	998, 1936
HaeII	RGCGCY	1 cut(s)	751
HaeIII	GGCC	5 cut(s)	5, 36, 473, 591, 1232
HapII	CCGG	8 cut(s)	122, 176, 224, 411, 924, 1821, 1892, 2033
HgaI	GACGC	6 cut(s)	13, 343, 707, 1023, 1532, 2107
HhaI	GCGC	3 cut(s)	315, 750, 2195
Hin1I	GRCGYC	2 cut(s)	748, 1034
Hin6I	GCGC	3 cut(s)	313, 748, 2193
HinP1I	GCGC	3 cut(s)	313, 748, 2193
HpaII	CCGG	8 cut(s)	122, 176, 224, 411, 924, 1821, 1892, 2033
Hpy166II	GTNNAC	9 cut(s)	139, 205, 301, 383, 608, 1096, 1839, 1918, 2150
Hpy188I	TCNGA	7 cut(s)	109, 132, 186, 492, 570, 1834, 1979
Hpy188III	TCNNGA	9 cut(s)	46, 80, 176, 268, 881, 1007, 1538, 1628, 2244
Hpy8I	GTNNAC	9 cut(s)	139, 205, 301, 383, 608, 1096, 1839, 1918, 2150
Hpy99I	CGWCG	5 cut(s)	29, 91, 109, 359, 1526
HpyAV	CCTTC	6 cut(s)	550, 937, 1728, 1789, 1957, 2002
HpyCH4III	ACNGT	3 cut(s)	298, 829, 2017
HpyCH4IV	ACGT	2 cut(s)	201, 308
HpyF10VI	GCNNNNNNNGC	9 cut(s)	49, 312, 351, 1022, 1031, 1445, 1864, 2124, 2201
HpyF3I	CTNAG	6 cut(s)	160, 567, 602, 1105, 1149, 1833
HpySE526I	ACGT	2 cut(s)	201, 308
Hsp92I	GRCGYC	2 cut(s)	748, 1034
HspAI	GCGC	3 cut(s)	313, 748, 2193
KasI	GGCGCC	1 cut(s)	747
KflI	GGGWCCC	1 cut(s)	1825
Kpn2I	TCCGGA	1 cut(s)	175
KpnI	GGTACC	2 cut(s)	365, 1653
KroI	GCCGGC	1 cut(s)	223
KroNI	GCCGGC	1 cut(s)	225
Ksp22I	TGATCA	1 cut(s)	1596
KspI	CCGCGG	1 cut(s)	333
Kzo9I	GATC	6 cut(s)	416, 1596, 1697, 1717, 2059, 2113
LmnI	GCTCC	4 cut(s)	133, 542, 1117, 2068
Lsp1109I	GCAGC	4 cut(s)	8, 1423, 2071, 2182
LweI	GCATC	4 cut(s)	1118, 1423, 1435, 2226
MabI	ACCWGGT	1 cut(s)	98
MaeI	CTAG	5 cut(s)	389, 939, 1161, 1406, 1853
MaeII	ACGT	2 cut(s)	201, 308
MaeIII	GTNAC	7 cut(s)	292, 839, 1035, 1319, 1424, 1900, 2000
MalI	GATC	6 cut(s)	418, 1598, 1699, 1719, 2061, 2115
MboI	GATC	6 cut(s)	416, 1596, 1697, 1717, 2059, 2113
MboII	GAAGA	7 cut(s)	426, 458, 1298, 1802, 1894, 2054, 2168
MfeI	CAATTG	2 cut(s)	1455, 2221
MflI	RGATCY	1 cut(s)	1697
MhlI	GDGCHC	2 cut(s)	45, 2073
MlsI	TGGCCA	3 cut(s)	473, 591, 1232
MluNI	TGGCCA	3 cut(s)	473, 591, 1232
Mly113I	GGCGCC	1 cut(s)	748
MlyI	GAGTC	6 cut(s)	80, 119, 1597, 1625, 1870, 1958
MmeI	TCCRAC	3 cut(s)	87, 2087, 2115
Mox20I	TGGCCA	3 cut(s)	473, 591, 1232
Mph1103I	ATGCAT	1 cut(s)	249
MroI	TCCGGA	1 cut(s)	175
MroNI	GCCGGC	1 cut(s)	223
MroXI	GAANNNNTTC	1 cut(s)	947
MscI	TGGCCA	3 cut(s)	473, 591, 1232
MseI	TTAA	2 cut(s)	735, 2079
MslI	CAYNNNNRTG	4 cut(s)	246, 1310, 1745, 1844
Msp20I	TGGCCA	3 cut(s)	473, 591, 1232
MspA1I	CMGCKG	4 cut(s)	21, 332, 1936, 2057
MspCI	CTTAAG	1 cut(s)	734
MspI	CCGG	8 cut(s)	122, 176, 224, 411, 924, 1821, 1892, 2033
MspR9I	CCNGG	5 cut(s)	100, 924, 1765, 1822, 1985
MunI	CAATTG	2 cut(s)	1455, 2221
Mva1269I	GAATGC	1 cut(s)	1027
MvaI	CCWGG	3 cut(s)	100, 1765, 1985
MvnI	CGCG	6 cut(s)	143, 315, 332, 354, 359, 2118
MwoI	GCNNNNNNNGC	9 cut(s)	49, 312, 351, 1022, 1031, 1445, 1864, 2124, 2201
NaeI	GCCGGC	1 cut(s)	225
NarI	GGCGCC	1 cut(s)	748
NciI	CCSGG	2 cut(s)	924, 1822
NdeI	CATATG	2 cut(s)	243, 775
NdeII	GATC	6 cut(s)	416, 1596, 1697, 1717, 2059, 2113
NgoMIV	GCCGGC	1 cut(s)	223
NheI	GCTAGC	2 cut(s)	1160, 1405
NlaIV	GGNNCC	9 cut(s)	78, 129, 363, 538, 749, 1651, 1826, 1827, 1890
NmeAIII	GCCGAG	1 cut(s)	34
NmuCI	GTSAC	2 cut(s)	839, 1035
NsiI	ATGCAT	1 cut(s)	249
NspI	RCATGY	5 cut(s)	214, 630, 994, 1750, 2131
PaeI	GCATGC	1 cut(s)	994
PcsI	WCGNNNNNNNCGW	1 cut(s)	110
PctI	GAATGC	1 cut(s)	1027
PdiI	GCCGGC	1 cut(s)	225
PdmI	GAANNNNTTC	1 cut(s)	947
PfeI	GAWTC	5 cut(s)	1244, 1451, 1501, 1541, 1895
Pfl23II	CGTACG	1 cut(s)	198
PflFI	GACNNNGTC	2 cut(s)	100, 1948
PkrI	GCNGC	6 cut(s)	7, 23, 222, 1438, 2086, 2197
PleI	GAGTC	6 cut(s)	79, 118, 1596, 1625, 1869, 1957
PluTI	GGCGCC	1 cut(s)	751
PmaCI	CACGTG	1 cut(s)	309
PmlI	CACGTG	1 cut(s)	309
PpsI	GAGTC	6 cut(s)	79, 118, 1596, 1625, 1869, 1957
Ppu21I	YACGTR	1 cut(s)	309
PpuMI	RGGWCCY	1 cut(s)	1825
Psp124BI	GAGCTC	1 cut(s)	2073
Psp5II	RGGWCCY	1 cut(s)	1825
Psp6I	CCWGG	3 cut(s)	98, 1763, 1983
PspCI	CACGTG	1 cut(s)	309
PspEI	GGTNACC	1 cut(s)	1319
PspFI	CCCAGC	2 cut(s)	994, 1932
PspGI	CCWGG	3 cut(s)	98, 1763, 1983
PspLI	CGTACG	1 cut(s)	198
PspN4I	GGNNCC	9 cut(s)	78, 129, 363, 538, 749, 1651, 1826, 1827, 1890
PspPI	GGNCC	1 cut(s)	1825
PspPPI	RGGWCCY	1 cut(s)	1825
PstI	CTGCAG	1 cut(s)	1869
PstNI	CAGNNNCTG	1 cut(s)	1864
PsuI	RGATCY	1 cut(s)	1697
PsyI	GACNNNGTC	2 cut(s)	100, 1948
PvuII	CAGCTG	3 cut(s)	21, 1936, 2057
RseI	CAYNNNNRTG	4 cut(s)	246, 1310, 1745, 1844
SacI	GAGCTC	1 cut(s)	2073
SacII	CCGCGG	1 cut(s)	333
SaqAI	TTAA	2 cut(s)	735, 2079
SatI	GCNGC	6 cut(s)	6, 22, 221, 1437, 2085, 2196
Sau3AI	GATC	6 cut(s)	416, 1596, 1697, 1717, 2059, 2113
Sau96I	GGNCC	1 cut(s)	1825
ScaI	AGTACT	2 cut(s)	427, 2109
SchI	GAGTC	6 cut(s)	80, 119, 1597, 1625, 1870, 1958
ScrFI	CCNGG	5 cut(s)	100, 924, 1765, 1822, 1985
SduI	GDGCHC	2 cut(s)	45, 2073
SexAI	ACCWGGT	1 cut(s)	98
SfaNI	GCATC	4 cut(s)	1118, 1423, 1435, 2226
SfcI	CTRYAG	2 cut(s)	1865, 2098
SfoI	GGCGCC	1 cut(s)	749
Sfr303I	CCGCGG	1 cut(s)	333
SgrBI	CCGCGG	1 cut(s)	333
SinI	GGWCC	1 cut(s)	1825
SmiMI	CAYNNNNRTG	4 cut(s)	246, 1310, 1745, 1844
SmlI	CTYRAG	2 cut(s)	734, 1547
SmoI	CTYRAG	2 cut(s)	734, 1547
SpeI	ACTAGT	1 cut(s)	1852
SphI	GCATGC	1 cut(s)	994
SsiI	CCGC	7 cut(s)	6, 52, 143, 221, 330, 332, 359
SspDI	GGCGCC	1 cut(s)	747
SspMI	CTAG	5 cut(s)	389, 939, 1161, 1406, 1853
SstI	GAGCTC	1 cut(s)	2073
StyD4I	CCNGG	5 cut(s)	98, 922, 1763, 1820, 1983
StyI	CCWWGG	2 cut(s)	1653, 1701
TaaI	ACNGT	3 cut(s)	298, 829, 2017
TaiI	ACGT	2 cut(s)	204, 311
TaqI	TCGA	7 cut(s)	27, 47, 267, 559, 644, 1521, 1539
TatI	WGTACW	4 cut(s)	425, 1690, 1836, 2107
TauI	GCSGC	2 cut(s)	8, 223
TfiI	GAWTC	5 cut(s)	1244, 1451, 1501, 1541, 1895
Tru1I	TTAA	2 cut(s)	735, 2079
Tru9I	TTAA	2 cut(s)	735, 2079
TscAI	CASTG	5 cut(s)	289, 832, 1246, 1503, 2171
TseFI	GTSAC	2 cut(s)	839, 1035
TseI	GCWGC	4 cut(s)	21, 1436, 2084, 2195
Tsp45I	GTSAC	2 cut(s)	839, 1035
TspGWI	ACGGA	4 cut(s)	546, 1888, 1961, 2081
TspRI	CASTG	5 cut(s)	289, 832, 1246, 1503, 2171
Tth111I	GACNNNGTC	2 cut(s)	100, 1948
Vha464I	CTTAAG	1 cut(s)	734
VpaK11BI	GGWCC	1 cut(s)	1825
XagI	CCTNNNNNAGG	1 cut(s)	1211
XapI	RAATTY	3 cut(s)	555, 1706, 1925
XceI	RCATGY	5 cut(s)	214, 630, 994, 1750, 2131
XmiI	GTMKAC	3 cut(s)	138, 607, 1917
XmnI	GAANNNNTTC	1 cut(s)	947
XspI	CTAG	5 cut(s)	389, 939, 1161, 1406, 1853
ZrmI	AGTACT	2 cut(s)	427, 2109
Zsp2I	ATGCAT	1 cut(s)	249

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.