Rroxscaffold_2G00100240

von Willebrand factor type A domain

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
22109653 .. 22114013
4361 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00100240.1

Sequence Viewer

Length: 2235 bp
ATGGCCGGCCAATTCTCCAGCTGCGTCGAGTACGGCCTCGGCCTCTCCAAGCGGATACTCTACGGCAAGGAGGCGGCTCCGGCTCCGTCGGCGATGTCGAGGTCGTCGTCCAGGTCGGGGCCGTCGGAGCAGGGGTACTACTTACCGGAGGCTCCGATGGTGTACGCGGCGGTGTCCGACCCGGAAATCGTGGACAATCCGGACATTCCGAGCTACCAGCCGTACGTCTACGGCCGGTGCGAGCCGCCGGCGTTGATACCTCTGCATATGCACGGCGTGGCTTTGGAGGTTGAGAGCTATCTGGACACTGCGTTTGTGACGGTCACCGGAAATTGGCGCGTGCATTGTATTTCCACCGGAAAAAAGTGCGATTGCCGCGTGGCGGTGCCGATGGGCGAGAAGGGTTCACTTCTAGGTGTAGAGGTTGATGTCGCCGGAAGTTCGTATCGGACTCAACTGATCACCACAGAAGGCCAACGGGATAGTCGGAAAGTAGCCAAAGATGCGTACTTTCTGAAACGTCACATATACACCTTCAAAGTGCCACAGGTTGAAGGAGGCTCCTTCATTTCGCTGAAGATCAGATGGTCTCAGAAATTGTTATATCATGATGGAAAGTTCTGCCTCACTGTGCCTTTTAATTTTCCAGCATATGTTAATCCTGTTGGGAATAAAATTATGAAAGGGGAGAAGATTTCGTTGAGTGTGAATATGGGTGCTGAAGCAGAAGTTTTATGCCAAACTACAAGCCATCCTCTTAAGGTGGTCAGGCGCCAAAGCGGTAGATTGAGCTTCTCATATGAAGCACAGGTAGCAGCATGGTCAAGTACAGACTTCAGCTTTACATTTACCGTTAACACAAAGGATGTATATGGTGGTGTGTTCTTGCAATCTCCAACTCTTCGTGATTTTGATGACAGAGAGATGTTCTGCTTCTATTTGATCCCCGGGAATAGCCAGACTTGGAAGGTTTTCAAAAAGGAAGTTATATTTATCATTGATATAAGTGGAAGTATGGCGGGAGACCCTCTTGAGAATGCAAAGAGTGCAGTATTGGCATCGCTTTCTAATCTCAACCGGGAAGATACTTTCAACATAATAGCTTTCAATGGAGAGGTTCGCGTATTCTCATCATCAATGGAGTTAGCAACAAATGAAGCATTACTGAAAGCTAAGAATTGGGTTAGCGCTGAACTTATTGCAGATGGTGGTACAAATATGTTACTTCCCCTAGGACAGGCTATGAAGTTGTTGGCCAAAACTGCTGATACAATTCCTTTCATTTTCCTCATTACTGATGGGGCTGTTGAAGATGAAAGAGATATTTGCAATATGATGAAAGGATATCTGACAAGTGGGGGCTCAATATGTCCTCGAATATCTACTTTTGGCATAGGTTTATATTGTAATCATTACTTCCTGCAAATGCTTGCACAAATTGGCAGGGGGTATTATGATGCTGCTTATGATGGAGAGTCAATTGACTATAGAGTGCAAAGGCTATTCACAAGGGCATCATCAGTGACTCTTGCCAATATAACCGTGGACGCTTTTGAACATCTCGATTCACTTGAGCTGTTTCCATCTAATATGCTGGATCTTTCATCTGGAAGTCCATTGATCATATCTGGCAGATATGAGGGAAGCTTTCCTCCCTCCATTAAAGTTAGCGGTACCTTGGCTGATATGAGCAACTTTGCCATAGACTTGAAAGTGCAAAGATCTAAGGATTTCCCACTTGATCGGGTGCTTGCGAAAAGGCATATTGACATGCGTACAGCTCATGCATGGTTGTTGGGAAGTAAAGAGCTTGAAGAGAAGGTCTCTAAAATGAGCAATCTAACCGGGGTCCCATCTGAGTACACTAGCATGACACTGAAGCAGACTGATAAAGGAAATAAAGCACTGGAATTAACTCGGACACAAGAGGTCTACAAAAAAGTTATTCAACGGACCAAGTCGGAGTCAAATAGCCAGAAGGATATAATCCTTGGAAGCCTGGGTGTTGGCTTTGGTAACCTGGCTGCAACAATCGAGAATAAAGCACCCGCTAGCAAGAAGCAAAGCCTTCTGATGTTGCAGAAGTCTTGGTTAAGGCTGCTTCCACCTGCTGTACTAGACTACTTGATCGCATCTGTTGCATGTGTTTCATTAGGACTTGTACCCACGTTAATAACCAGTGCGCAATTTTTCTCACACAACTCTGCACTGCCCTTTGTTGTTGTGAGTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

744

Amino Acids

81.83

Weight (kDa)

7.85

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VWA_3 PF13768 328 - 486 4.7e-14 von Willebrand factor type A domain
VWA_2 PF13519 329 - 434 3.1e-11 von Willebrand factor type A domain
VWA PF00092 329 - 445 2.8e-09 von Willebrand factor type A domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2116
Acc16I TGCGCA 1 cut(s) 2184
Acc36I ACCTGC 1 cut(s) 2116
Acc65I GGTACC 1 cut(s) 1673
AccB1I GGYRCC 3 cut(s) 385, 771, 1673
AccI GTMKAC 2 cut(s) 228, 1932
AccII CGCG 4 cut(s) 167, 339, 378, 1122
AccIII TCCGGA 1 cut(s) 199
AclWI GGATC 2 cut(s) 937, 1605
AcoI YGGCCR 4 cut(s) 3, 7, 232, 1254
AcuI CTGAAG 4 cut(s) 596, 741, 820, 1898
AcyI GRCGYC 1 cut(s) 772
AdeI CACNNNGTG 1 cut(s) 277
AfeI AGCGCT 1 cut(s) 1189
AfiI CCNNNNNNNGG 4 cut(s) 117, 333, 382, 1237
AflII CTTAAG 1 cut(s) 758
AjnI CCWGG 3 cut(s) 110, 1998, 2019
Alw26I GTCTC 3 cut(s) 594, 1017, 1828
AlwI GGATC 2 cut(s) 937, 1605
Ama87I CYCGRG 1 cut(s) 947
Aor13HI TCCGGA 1 cut(s) 199
Aor51HI AGCGCT 1 cut(s) 1189
AoxI GGCC 8 cut(s) 3, 7, 34, 40, 119, 232, 472, 1254
ApeKI GCWGC 5 cut(s) 21, 815, 1460, 2024, 2098
ArsI GACNNNNNNTTYG 2 cut(s) 296, 328
Asp700I GAANNNNTTC 1 cut(s) 971
Asp718I GGTACC 1 cut(s) 1673
AspA2I CCTAGG 1 cut(s) 1231
AspLEI GCGC 4 cut(s) 339, 774, 1190, 2185
AspS9I GGNCC 3 cut(s) 119, 1849, 1953
AsuC2I CCSGG 5 cut(s) 182, 948, 949, 1079, 1846
AsuHPI GGTGA 2 cut(s) 316, 454
AsuNHI GCTAGC 1 cut(s) 2051
AvaI CYCGRG 1 cut(s) 947
AvaII GGWCC 2 cut(s) 1849, 1953
AvrII CCTAGG 1 cut(s) 1231
BalI TGGCCA 1 cut(s) 1256
BanI GGYRCC 3 cut(s) 385, 771, 1673
BanII GRGCYC 1 cut(s) 1364
BbvI GCAGC 5 cut(s) 8, 827, 1447, 2011, 2085
BceAI ACGGC 6 cut(s) 49, 79, 106, 205, 247, 289
BciT130I CCWGG 3 cut(s) 112, 2000, 2021
BciVI GTATCC 1 cut(s) 48
BclI TGATCA 2 cut(s) 459, 1620
BcnI CCSGG 5 cut(s) 182, 948, 949, 1079, 1846
BcoDI GTCTC 3 cut(s) 594, 1017, 1828
BfaI CTAG 5 cut(s) 413, 1232, 1866, 2052, 2117
BfmI CTRYAG 1 cut(s) 1486
BfoI RGCGCY 2 cut(s) 775, 1191
BfrI CTTAAG 1 cut(s) 758
BfuAI ACCTGC 1 cut(s) 2116
BfuI GTATCC 1 cut(s) 48
BglII AGATCT 1 cut(s) 1721
BisI GCNGC 9 cut(s) 22, 75, 168, 245, 376, 816, 1461, 2025, 2099
BlnI CCTAGG 1 cut(s) 1231
BlsI GCNGC 9 cut(s) 23, 76, 169, 246, 377, 817, 1462, 2026, 2100
Bme1390I CCNGG 8 cut(s) 112, 182, 948, 949, 1079, 1846, 2000, 2021
Bme18I GGWCC 2 cut(s) 1849, 1953
BmeT110I CYCGRG 1 cut(s) 947
BmgT120I GGNCC 3 cut(s) 119, 1849, 1953
BmrFI CCNGG 8 cut(s) 112, 182, 948, 949, 1079, 1846, 2000, 2021
BmsI GCATC 5 cut(s) 493, 1067, 1447, 1523, 2141
BmtI GCTAGC 1 cut(s) 2055
BplI GAGNNNNNCTC 2 cut(s) 1808, 1840
BpuEI CTTGAG 2 cut(s) 1052, 1592
BpuMI CCSGG 5 cut(s) 182, 948, 949, 1079, 1846
BsaHI GRCGYC 1 cut(s) 772
BsaI GGTCTC 3 cut(s) 594, 1017, 1828
BsaJI CCNNGG 9 cut(s) 37, 946, 947, 1231, 1542, 1677, 1845, 1990, 1999
BsaWI WCCGGW 4 cut(s) 145, 199, 326, 356
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 4 cut(s) 117, 333, 382, 1237
Bse118I RCCGGY 3 cut(s) 5, 234, 247
Bse1I ACTGG 2 cut(s) 1911, 2178
BseAI TCCGGA 1 cut(s) 199
BseBI CCWGG 3 cut(s) 112, 2000, 2021
BseDI CCNNGG 9 cut(s) 37, 946, 947, 1231, 1542, 1677, 1845, 1990, 1999
BseGI GGATG 2 cut(s) 751, 871
BseLI CCNNNNNNNGG 4 cut(s) 117, 333, 382, 1237
BseMII CTCAG 2 cut(s) 605, 1848
BseNI ACTGG 2 cut(s) 1911, 2178
BseX3I CGGCCG 1 cut(s) 232
BseXI GCAGC 5 cut(s) 8, 827, 1447, 2011, 2085
BsgI GTGCAG 2 cut(s) 1068, 2190
Bsh1236I CGCG 4 cut(s) 167, 339, 378, 1122
Bsh1285I CGRYCG 1 cut(s) 235
BshFI GGCC 8 cut(s) 5, 9, 36, 42, 121, 234, 474, 1256
BshNI GGYRCC 3 cut(s) 385, 771, 1673
BsiEI CGRYCG 1 cut(s) 235
BsiHKCI CYCGRG 1 cut(s) 947
BsiWI CGTACG 1 cut(s) 222
BslFI GGGAC 1 cut(s) 1835
BslI CCNNNNNNNGG 4 cut(s) 117, 333, 382, 1237
BsmAI GTCTC 3 cut(s) 594, 1017, 1828
BsmFI GGGAC 1 cut(s) 1835
BsmI GAATGC 1 cut(s) 1042
BsnI GGCC 8 cut(s) 5, 9, 36, 42, 121, 234, 474, 1256
Bso31I GGTCTC 3 cut(s) 594, 1017, 1828
BsoBI CYCGRG 1 cut(s) 947
Bsp1286I GDGCHC 1 cut(s) 1364
Bsp13I TCCGGA 1 cut(s) 199
Bsp143I GATC 8 cut(s) 459, 579, 942, 1597, 1620, 1721, 1741, 2127
BspANI GGCC 8 cut(s) 5, 9, 36, 42, 121, 234, 474, 1256
BspCNI CTCAG 2 cut(s) 604, 1849
BspEI TCCGGA 1 cut(s) 199
BspFNI CGCG 4 cut(s) 167, 339, 378, 1122
BspHI TCATGA 1 cut(s) 607
BspMI ACCTGC 1 cut(s) 2116
BspOI GCTAGC 1 cut(s) 2055
BspPI GGATC 2 cut(s) 937, 1605
BspT107I GGYRCC 3 cut(s) 385, 771, 1673
BspTI CTTAAG 1 cut(s) 758
BspTNI GGTCTC 3 cut(s) 594, 1017, 1828
BsrFI RCCGGY 3 cut(s) 5, 234, 247
BsrI ACTGG 2 cut(s) 1911, 2178
BssAI RCCGGY 3 cut(s) 5, 234, 247
BssECI CCNNGG 9 cut(s) 37, 946, 947, 1231, 1542, 1677, 1845, 1990, 1999
BssMI GATC 8 cut(s) 459, 579, 942, 1597, 1620, 1721, 1741, 2127
BssNI GRCGYC 1 cut(s) 772
BssT1I CCWWGG 3 cut(s) 1231, 1677, 1990
Bst2UI CCWGG 3 cut(s) 112, 2000, 2021
Bst4CI ACNGT 4 cut(s) 322, 631, 853, 1543
Bst6I CTCTTC 2 cut(s) 906, 1809
BstACI GRCGYC 1 cut(s) 772
BstAFI CTTAAG 1 cut(s) 758
BstAPI GCANNNNNTGC 2 cut(s) 1046, 2138
BstC8I GCNNGC 7 cut(s) 7, 242, 249, 341, 1431, 1752, 2053
BstDEI CTNAG 4 cut(s) 591, 1173, 1725, 1857
BstDSI CCRYGG 1 cut(s) 1542
BstEII GGTNACC 2 cut(s) 322, 2015
BstENI CCTNNNNNAGG 1 cut(s) 1235
BstF5I GGATG 2 cut(s) 751, 871
BstFNI CGCG 4 cut(s) 167, 339, 378, 1122
BstH2I RGCGCY 2 cut(s) 775, 1191
BstHHI GCGC 4 cut(s) 339, 774, 1190, 2185
BstKTI GATC 8 cut(s) 462, 582, 945, 1600, 1623, 1724, 1744, 2130
BstMAI GTCTC 3 cut(s) 594, 1017, 1828
BstMBI GATC 8 cut(s) 459, 579, 942, 1597, 1620, 1721, 1741, 2127
BstMCI CGRYCG 1 cut(s) 235
BstNI CCWGG 3 cut(s) 112, 2000, 2021
BstNSI RCATGY 2 cut(s) 1774, 2145
BstPI GGTNACC 2 cut(s) 322, 2015
BstSCI CCNGG 8 cut(s) 110, 180, 946, 947, 1077, 1844, 1998, 2019
BstSFI CTRYAG 1 cut(s) 1486
BstUI CGCG 4 cut(s) 167, 339, 378, 1122
BstV1I GCAGC 5 cut(s) 8, 827, 1447, 2011, 2085
BstX2I RGATCY 2 cut(s) 1597, 1721
BstYI RGATCY 2 cut(s) 1597, 1721
BstZI CGGCCG 1 cut(s) 232
BsuI GTATCC 1 cut(s) 48
BsuRI GGCC 8 cut(s) 5, 9, 36, 42, 121, 234, 474, 1256
BtgI CCRYGG 1 cut(s) 1542
BtgZI GCGATG 2 cut(s) 107, 1044
BtsCI GGATG 2 cut(s) 751, 871
BtsI GCAGTG 2 cut(s) 306, 2207
BtsIMutI CAGTG 7 cut(s) 306, 627, 1527, 1874, 1904, 2185, 2207
BveI ACCTGC 1 cut(s) 2116
Cac8I GCNNGC 7 cut(s) 7, 242, 249, 341, 1431, 1752, 2053
CciI TCATGA 1 cut(s) 607
CfoI GCGC 4 cut(s) 339, 774, 1190, 2185
Cfr10I RCCGGY 3 cut(s) 5, 234, 247
Cfr13I GGNCC 3 cut(s) 119, 1849, 1953
Cfr9I CCCGGG 1 cut(s) 947
CseI GACGC 2 cut(s) 13, 1556
CviAII CATG 7 cut(s) 608, 819, 1771, 1784, 1788, 1870, 2142
DdeI CTNAG 4 cut(s) 591, 1173, 1725, 1857
DinI GGCGCC 1 cut(s) 773
DpnI GATC 8 cut(s) 461, 581, 944, 1599, 1622, 1723, 1743, 2129
DpnII GATC 8 cut(s) 459, 579, 942, 1597, 1620, 1721, 1741, 2127
DraIII CACNNNGTG 1 cut(s) 277
EaeI YGGCCR 4 cut(s) 3, 7, 232, 1254
EagI CGGCCG 1 cut(s) 232
Eam1104I CTCTTC 2 cut(s) 906, 1809
EarI CTCTTC 2 cut(s) 906, 1809
EclXI CGGCCG 1 cut(s) 232
Eco130I CCWWGG 3 cut(s) 1231, 1677, 1990
Eco24I GRGCYC 1 cut(s) 1364
Eco31I GGTCTC 3 cut(s) 594, 1017, 1828
Eco32I GATATC 1 cut(s) 1346
Eco47I GGWCC 2 cut(s) 1849, 1953
Eco47III AGCGCT 1 cut(s) 1189
Eco52I CGGCCG 1 cut(s) 232
Eco57I CTGAAG 4 cut(s) 596, 741, 820, 1898
Eco88I CYCGRG 1 cut(s) 947
Eco91I GGTNACC 2 cut(s) 322, 2015
EcoNI CCTNNNNNAGG 1 cut(s) 1235
EcoO109I RGGNCCY 1 cut(s) 1849
EcoO65I GGTNACC 2 cut(s) 322, 2015
EcoRII CCWGG 3 cut(s) 110, 1998, 2019
EcoRV GATATC 1 cut(s) 1346
EcoT14I CCWWGG 3 cut(s) 1231, 1677, 1990
EcoT22I ATGCAT 1 cut(s) 1789
EcoT38I GRGCYC 1 cut(s) 1364
EgeI GGCGCC 1 cut(s) 773
EheI GGCGCC 1 cut(s) 773
ErhI CCWWGG 3 cut(s) 1231, 1677, 1990
FaeI CATG 7 cut(s) 611, 822, 1774, 1787, 1791, 1873, 2145
FaqI GGGAC 1 cut(s) 1835
FatI CATG 7 cut(s) 607, 818, 1770, 1783, 1787, 1869, 2141
FauI CCCGC 2 cut(s) 1012, 2056
FauNDI CATATG 3 cut(s) 267, 652, 799
FbaI TGATCA 2 cut(s) 459, 1620
FblI GTMKAC 2 cut(s) 228, 1932
Fnu4HI GCNGC 9 cut(s) 22, 75, 168, 245, 376, 816, 1461, 2025, 2099
FokI GGATG 2 cut(s) 738, 878
FriOI GRGCYC 1 cut(s) 1364
FseI GGCCGGCC 1 cut(s) 9
Fsp4HI GCNGC 9 cut(s) 22, 75, 168, 245, 376, 816, 1461, 2025, 2099
FspBI CTAG 5 cut(s) 413, 1232, 1866, 2052, 2117
FspI TGCGCA 1 cut(s) 2184
GlaI GCGC 4 cut(s) 338, 773, 1189, 2184
GluI GCNGC 9 cut(s) 22, 75, 168, 245, 376, 816, 1461, 2025, 2099
HaeII RGCGCY 2 cut(s) 775, 1191
HaeIII GGCC 8 cut(s) 5, 9, 36, 42, 121, 234, 474, 1256
HgaI GACGC 2 cut(s) 13, 1556
HhaI GCGC 4 cut(s) 339, 774, 1190, 2185
Hin1I GRCGYC 1 cut(s) 772
Hin1II CATG 7 cut(s) 611, 822, 1774, 1787, 1791, 1873, 2145
Hin6I GCGC 4 cut(s) 337, 772, 1188, 2183
HinP1I GCGC 4 cut(s) 337, 772, 1188, 2183
HincII GTYRAC 1 cut(s) 856
HindII GTYRAC 1 cut(s) 856
HindIII AAGCTT 1 cut(s) 1645
HinfI GANTC 5 cut(s) 451, 1475, 1525, 1565, 1964
HpaI GTTAAC 1 cut(s) 856
HphI GGTGA 2 cut(s) 316, 454
Hpy166II GTNNAC 8 cut(s) 163, 193, 229, 407, 856, 1546, 1863, 1933
Hpy188III TCNNGA 8 cut(s) 200, 302, 608, 905, 1031, 1562, 1608, 2035
Hpy8I GTNNAC 8 cut(s) 163, 193, 229, 407, 856, 1546, 1863, 1933
Hpy99I CGWCG 4 cut(s) 29, 91, 109, 127
HpyAV CCTTC 9 cut(s) 394, 464, 544, 548, 574, 961, 1813, 1972, 2078
HpyCH4III ACNGT 4 cut(s) 322, 631, 853, 1543
HpyCH4IV ACGT 3 cut(s) 225, 520, 2168
HpyF3I CTNAG 4 cut(s) 591, 1173, 1725, 1857
HpySE526I ACGT 3 cut(s) 225, 520, 2168
Hsp92I GRCGYC 1 cut(s) 772
Hsp92II CATG 7 cut(s) 611, 822, 1774, 1787, 1791, 1873, 2145
HspAI GCGC 4 cut(s) 337, 772, 1188, 2183
KasI GGCGCC 1 cut(s) 771
KflI GGGWCCC 1 cut(s) 1849
Kpn2I TCCGGA 1 cut(s) 199
KpnI GGTACC 1 cut(s) 1677
KroI GCCGGC 2 cut(s) 5, 247
KroNI GCCGGC 2 cut(s) 7, 249
Ksp22I TGATCA 2 cut(s) 459, 1620
KspAI GTTAAC 1 cut(s) 856
Kzo9I GATC 8 cut(s) 459, 579, 942, 1597, 1620, 1721, 1741, 2127
LmnI GCTCC 5 cut(s) 82, 88, 127, 157, 566
Lsp1109I GCAGC 5 cut(s) 8, 827, 1447, 2011, 2085
LweI GCATC 5 cut(s) 493, 1067, 1447, 1523, 2141
MaeI CTAG 5 cut(s) 413, 1232, 1866, 2052, 2117
MaeII ACGT 3 cut(s) 225, 520, 2168
MaeIII GTNAC 6 cut(s) 316, 322, 521, 1221, 1522, 2015
MalI GATC 8 cut(s) 461, 581, 944, 1599, 1622, 1723, 1743, 2129
MboI GATC 8 cut(s) 459, 579, 942, 1597, 1620, 1721, 1741, 2127
MboII GAAGA 6 cut(s) 589, 703, 893, 1094, 1322, 1826
MfeI CAATTG 1 cut(s) 1479
MflI RGATCY 2 cut(s) 1597, 1721
MhlI GDGCHC 1 cut(s) 1364
MlsI TGGCCA 1 cut(s) 1256
MluNI TGGCCA 1 cut(s) 1256
Mly113I GGCGCC 1 cut(s) 772
MlyI GAGTC 4 cut(s) 445, 1484, 1519, 1973
MmeI TCCRAC 5 cut(s) 105, 201, 467, 920, 1941
Mox20I TGGCCA 1 cut(s) 1256
Mph1103I ATGCAT 1 cut(s) 1789
MreI CGCCGGCG 1 cut(s) 247
MroI TCCGGA 1 cut(s) 199
MroNI GCCGGC 2 cut(s) 5, 247
MroXI GAANNNNTTC 1 cut(s) 971
MscI TGGCCA 1 cut(s) 1256
MseI TTAA 9 cut(s) 639, 657, 759, 855, 1662, 1913, 2093, 2171, 2233
MslI CAYNNNNRTG 1 cut(s) 1868
Msp20I TGGCCA 1 cut(s) 1256
MspA1I CMGCKG 1 cut(s) 21
MspCI CTTAAG 1 cut(s) 758
MspR9I CCNGG 8 cut(s) 112, 182, 948, 949, 1079, 1846, 2000, 2021
MunI CAATTG 1 cut(s) 1479
Mva1269I GAATGC 1 cut(s) 1042
MvaI CCWGG 3 cut(s) 112, 2000, 2021
MvnI CGCG 4 cut(s) 167, 339, 378, 1122
NaeI GCCGGC 2 cut(s) 7, 249
NarI GGCGCC 1 cut(s) 772
NciI CCSGG 5 cut(s) 182, 948, 949, 1079, 1846
NdeI CATATG 3 cut(s) 267, 652, 799
NdeII GATC 8 cut(s) 459, 579, 942, 1597, 1620, 1721, 1741, 2127
NgoMIV GCCGGC 2 cut(s) 5, 247
NheI GCTAGC 1 cut(s) 2051
NlaIII CATG 7 cut(s) 611, 822, 1774, 1787, 1791, 1873, 2145
NmeAIII GCCGAG 1 cut(s) 18
NmuCI GTSAC 4 cut(s) 316, 322, 521, 1522
NsbI TGCGCA 1 cut(s) 2184
NsiI ATGCAT 1 cut(s) 1789
NspI RCATGY 2 cut(s) 1774, 2145
PagI TCATGA 1 cut(s) 607
PaqCI CACCTGC 1 cut(s) 2116
PcsI WCGNNNNNNNCGW 3 cut(s) 95, 104, 237
PctI GAATGC 1 cut(s) 1042
PdiI GCCGGC 2 cut(s) 7, 249
PdmI GAANNNNTTC 1 cut(s) 971
PfeI GAWTC 1 cut(s) 1565
Pfl23II CGTACG 1 cut(s) 222
PflFI GACNNNGTC 1 cut(s) 1957
PkrI GCNGC 9 cut(s) 23, 76, 169, 246, 377, 817, 1462, 2026, 2100
PleI GAGTC 4 cut(s) 445, 1483, 1519, 1972
PluTI GGCGCC 1 cut(s) 775
PpsI GAGTC 4 cut(s) 445, 1483, 1519, 1972
PpuMI RGGWCCY 1 cut(s) 1849
Psp5II RGGWCCY 1 cut(s) 1849
Psp6I CCWGG 3 cut(s) 110, 1998, 2019
PspEI GGTNACC 2 cut(s) 322, 2015
PspGI CCWGG 3 cut(s) 110, 1998, 2019
PspLI CGTACG 1 cut(s) 222
PspPI GGNCC 3 cut(s) 119, 1849, 1953
PspPPI RGGWCCY 1 cut(s) 1849
PsuI RGATCY 2 cut(s) 1597, 1721
PsyI GACNNNGTC 1 cut(s) 1957
PvuII CAGCTG 1 cut(s) 21
RigI GGCCGGCC 1 cut(s) 9
RseI CAYNNNNRTG 1 cut(s) 1868
SaqAI TTAA 9 cut(s) 639, 657, 759, 855, 1662, 1913, 2093, 2171, 2233
SatI GCNGC 9 cut(s) 22, 75, 168, 245, 376, 816, 1461, 2025, 2099
Sau3AI GATC 8 cut(s) 459, 579, 942, 1597, 1620, 1721, 1741, 2127
Sau96I GGNCC 3 cut(s) 119, 1849, 1953
SchI GAGTC 4 cut(s) 445, 1484, 1519, 1973
ScrFI CCNGG 8 cut(s) 112, 182, 948, 949, 1079, 1846, 2000, 2021
SduI GDGCHC 1 cut(s) 1364
SfaNI GCATC 5 cut(s) 493, 1067, 1447, 1523, 2141
SfcI CTRYAG 1 cut(s) 1486
SfoI GGCGCC 1 cut(s) 773
SgrAI CRCCGGYG 1 cut(s) 247
SinI GGWCC 2 cut(s) 1849, 1953
SmaI CCCGGG 1 cut(s) 949
SmiMI CAYNNNNRTG 1 cut(s) 1868
SmlI CTYRAG 3 cut(s) 758, 1031, 1571
SmoI CTYRAG 3 cut(s) 758, 1031, 1571
SspDI GGCGCC 1 cut(s) 771
SspMI CTAG 5 cut(s) 413, 1232, 1866, 2052, 2117
StyD4I CCNGG 8 cut(s) 110, 180, 946, 947, 1077, 1844, 1998, 2019
StyI CCWWGG 3 cut(s) 1231, 1677, 1990
TaaI ACNGT 4 cut(s) 322, 631, 853, 1543
TaiI ACGT 3 cut(s) 228, 523, 2171
TaqI TCGA 5 cut(s) 27, 98, 1375, 1563, 2034
TatI WGTACW 3 cut(s) 827, 1860, 2113
TauI GCSGC 4 cut(s) 77, 170, 247, 378
TfiI GAWTC 1 cut(s) 1565
Tru1I TTAA 9 cut(s) 639, 657, 759, 855, 1662, 1913, 2093, 2171, 2233
Tru9I TTAA 9 cut(s) 639, 657, 759, 855, 1662, 1913, 2093, 2171, 2233
TscAI CASTG 7 cut(s) 313, 634, 1527, 1881, 1911, 2185, 2214
TseFI GTSAC 4 cut(s) 316, 322, 521, 1522
TseI GCWGC 5 cut(s) 21, 815, 1460, 2024, 2098
Tsp45I GTSAC 4 cut(s) 316, 322, 521, 1522
TspGWI ACGGA 2 cut(s) 75, 1966
TspMI CCCGGG 1 cut(s) 947
TspRI CASTG 7 cut(s) 313, 634, 1527, 1881, 1911, 2185, 2214
Tth111I GACNNNGTC 1 cut(s) 1957
Vha464I CTTAAG 1 cut(s) 758
VpaK11BI GGWCC 2 cut(s) 1849, 1953
XagI CCTNNNNNAGG 1 cut(s) 1235
XceI RCATGY 2 cut(s) 1774, 2145
XcmI CCANNNNNNNNNTGG 1 cut(s) 1540
XmaI CCCGGG 1 cut(s) 947
XmaJI CCTAGG 1 cut(s) 1231
XmiI GTMKAC 2 cut(s) 228, 1932
XmnI GAANNNNTTC 1 cut(s) 971
XspI CTAG 5 cut(s) 413, 1232, 1866, 2052, 2117
Zsp2I ATGCAT 1 cut(s) 1789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.