Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000305.1

Orthogroup ID

OG0004111

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 4341

Gene Structure 4340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000305.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

atggccgggcaattctccagctgcgtcgagtacggcgtggggctctccaagcggatactctacggcaaggaggcggctccggctccgtcggcgatgtcgaggtcgtcgtccaggtcgaggccgtcggagcaggggtattacttaccggaggctccgatggtgtacgcggcggtgtccgacccggaaatcgtggacaatccggacattccgagctaccagccgtacgtctacggccggtgcgagccgccggcgttgatacctctgcatatgcacggcgtggctttggagattgagagctatctggacactgcgtttgtgacggtcaccggaaattggcgcgtgcattgtatttccaccggaaaaaagtgcgattgccgcgtggcggtgccgatgggcgagaagggttcacttctaggtgtagaggttgatgtcgccggaacatatgttaatcctgttgggaataaaattatgaaaggggagaagatttcgtttagtgtgaatatgggtgctgaagcagaagttttatgccaaactacaagccatcctcttaaggtggtcaggcgccaaagcggtagattgagcttctcatatgaagcacaggtagcagcatggtcaagtacagacttcagcttttcatttactgttaacacaaaggatgtatatggtggtgtgttcttgcaatctccaactcttcgtgattttgatgacagagagatgttctgcttctatttgatccccaggaatagccagacttggaaggttttcaaaaaggaagttatatttatcattgatataagtgcaagtatggcgggagaccctcttgagaatgcaaagagtgcagtactggcatcgctttctaatctcaaccgggaagatactttcaacataatagctttcaatggagaggttcgcgaattctcatcatcaatggagttagcaacaaatgaagcattactgaaagctaagaattgggttagcgctgaacttattgcagatggtggtacaaatatgttacttcccctaagacaggctatgaagttgttggccaaaactgctgatacaattcctttcattttcctcattactgatggggccgtcgaagatgaaagagatatttgcaatatgatgaaaggatatctgacaagtgggggctcaatatgtcctcgaatatctacttttggcataggtttatattgtaatcattacttcctgcaaatgctagcacaaattggcaggggctattatgatgctgcttatgatggagagtcaattgactatagagtgcaaaggctattcacaagggcatcatcagtgactcttgccaatataaccgtggacgcttttgaacatctcgattcgcttgagctgtttccatctaatatgctggatctttcatctggaagtccattgatcatatctggcagatatgagggaagctttcctccctccattaaagttagcggtaccttggctgatatgagcaactttgccatagacttgaaagtgcaaagatctaaggatttcccacttgatcgggtgcttgcgaaaaggcatattgacatgcgtacagctcatgcatggttgttgggaagtaaagagcttgaagagaaggtctttaaaatgagcaatctaaccggggtcccatctgagtacactagcatgacactgaagcagactgataaaggaaataaagcactggaattaactcggacacaagaggtctacaaaaaagttattcagcgggccaagtcggagtcaaatagccagaaggatataatccttggaagcctgggtgttggctttggtaacctggctgcaacagtcgagaataaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA_3

Protein Analysis

611

Amino Acids

67.32

Weight (kDa)

5.9

Isoelectric Point (pI)

35.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72500 AT1G72500 AT1G72500
fragaria_vesca	FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050 FvH4_6g35050
malus_domestica	MD09G1179800.v1.1 MD17G1165400.v1.1
prunus_persica	Prupe.3G038500_v2.0.a1 Prupe.3G038500_v2.0.a1 Prupe.3G038500_v2.0.a1
pyrus_communis	pycom09g09750 pycom17g15810
rosa_chinensis	RchiOBHm_Chr2g0146211
rosa_laevigata	RLG00000020186
rosa_multiflora	Rmu_ssc0000305.1_g000001
rosa_roxburghii	Rroxscaffold_152G00434910 Rroxscaffold_1G00024240 Rroxscaffold_1G00059690 Rroxscaffold_2G00100240 Rroxscaffold_2G00150940 Rroxscaffold_5G00356980 Rroxscaffold_7G00181760
rosa_rugosa	Rorug02G0393800
rosa_samantha	Rh2AG449800 Rh2BG462000 Rh2CG436700 Rh2DG471300
rosa_wichuraiana	Rw2G036710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1463
AccB1I	GGYRCC	3 cut(s)	385, 561, 1463
AccI	GTMKAC	2 cut(s)	228, 1722
AccII	CGCG	4 cut(s)	167, 339, 378, 912
AccIII	TCCGGA	1 cut(s)	199
AclWI	GGATC	2 cut(s)	727, 1395
AcoI	YGGCCR	3 cut(s)	3, 232, 1044
AcsI	RAATTY	1 cut(s)	914
AcuI	CTGAAG	3 cut(s)	531, 610, 1688
AcyI	GRCGYC	1 cut(s)	562
AdeI	CACNNNGTG	1 cut(s)	277
AfaI	GTAC	9 cut(s)	32, 164, 224, 619, 843, 1003, 1465, 1567, 1652
AfeI	AGCGCT	1 cut(s)	979
AfiI	CCNNNNNNNGG	4 cut(s)	117, 333, 382, 1027
AflII	CTTAAG	1 cut(s)	548
AgsI	TTSAA	6 cut(s)	766, 883, 898, 1346, 1501, 1604
AjnI	CCWGG	4 cut(s)	110, 737, 1788, 1809
Alw26I	GTCTC	1 cut(s)	807
AlwI	GGATC	2 cut(s)	727, 1395
Aor13HI	TCCGGA	1 cut(s)	199
Aor51HI	AGCGCT	1 cut(s)	979
AoxI	GGCC	6 cut(s)	3, 119, 232, 1044, 1092, 1743
ApeKI	GCWGC	4 cut(s)	21, 605, 1250, 1814
ApoI	RAATTY	1 cut(s)	914
ArsI	GACNNNNNNTTYG	2 cut(s)	296, 328
Asp700I	GAANNNNTTC	1 cut(s)	761
Asp718I	GGTACC	1 cut(s)	1463
AspLEI	GCGC	3 cut(s)	339, 564, 980
AspS9I	GGNCC	3 cut(s)	1092, 1639, 1743
AsuC2I	CCSGG	4 cut(s)	7, 182, 869, 1636
AsuHPI	GGTGA	1 cut(s)	316
AsuNHI	GCTAGC	1 cut(s)	1219
AvaII	GGWCC	1 cut(s)	1639
BalI	TGGCCA	1 cut(s)	1046
BanI	GGYRCC	3 cut(s)	385, 561, 1463
BanII	GRGCYC	2 cut(s)	45, 1154
BbvI	GCAGC	4 cut(s)	8, 617, 1237, 1801
BccI	CCATC	8 cut(s)	151, 385, 549, 989, 1082, 1253, 1381, 1651
BceAI	ACGGC	7 cut(s)	49, 79, 106, 205, 247, 289, 1079
BciT130I	CCWGG	4 cut(s)	112, 739, 1790, 1811
BciVI	GTATCC	1 cut(s)	48
BclI	TGATCA	1 cut(s)	1410
BcnI	CCSGG	4 cut(s)	7, 182, 869, 1636
BcoDI	GTCTC	1 cut(s)	807
BfaI	CTAG	3 cut(s)	413, 1220, 1656
BfmI	CTRYAG	1 cut(s)	1276
BfoI	RGCGCY	2 cut(s)	565, 981
BfrI	CTTAAG	1 cut(s)	548
BfuI	GTATCC	1 cut(s)	48
BglII	AGATCT	1 cut(s)	1511
BisI	GCNGC	8 cut(s)	22, 75, 168, 245, 376, 606, 1251, 1815
BlsI	GCNGC	8 cut(s)	23, 76, 169, 246, 377, 607, 1252, 1816
BmcAI	AGTACT	1 cut(s)	843
Bme1390I	CCNGG	8 cut(s)	7, 112, 182, 739, 869, 1636, 1790, 1811
Bme18I	GGWCC	1 cut(s)	1639
BmgT120I	GGNCC	3 cut(s)	1092, 1639, 1743
BmiI	GGNNCC	9 cut(s)	78, 84, 153, 387, 563, 1093, 1465, 1640, 1641
BmrFI	CCNGG	8 cut(s)	7, 112, 182, 739, 869, 1636, 1790, 1811
BmsI	GCATC	3 cut(s)	857, 1237, 1313
BmtI	GCTAGC	1 cut(s)	1223
BpuEI	CTTGAG	2 cut(s)	842, 1382
BpuMI	CCSGG	4 cut(s)	7, 182, 869, 1636
BsaHI	GRCGYC	1 cut(s)	562
BsaI	GGTCTC	1 cut(s)	807
BsaJI	CCNNGG	6 cut(s)	737, 1332, 1467, 1635, 1780, 1789
BsaWI	WCCGGW	4 cut(s)	145, 199, 326, 356
BsaXI	ACNNNNNCTCC	2 cut(s)	119, 149
Bsc4I	CCNNNNNNNGG	4 cut(s)	117, 333, 382, 1027
Bse118I	RCCGGY	2 cut(s)	234, 247
Bse1I	ACTGG	2 cut(s)	849, 1701
BseAI	TCCGGA	1 cut(s)	199
BseBI	CCWGG	4 cut(s)	112, 739, 1790, 1811
BseDI	CCNNGG	6 cut(s)	737, 1332, 1467, 1635, 1780, 1789
BseGI	GGATG	2 cut(s)	541, 661
BseLI	CCNNNNNNNGG	4 cut(s)	117, 333, 382, 1027
BseMII	CTCAG	1 cut(s)	1638
BseNI	ACTGG	2 cut(s)	849, 1701
BseX3I	CGGCCG	1 cut(s)	232
BseXI	GCAGC	4 cut(s)	8, 617, 1237, 1801
BsgI	GTGCAG	1 cut(s)	858
Bsh1236I	CGCG	4 cut(s)	167, 339, 378, 912
Bsh1285I	CGRYCG	1 cut(s)	235
BshFI	GGCC	6 cut(s)	5, 121, 234, 1046, 1094, 1745
BshNI	GGYRCC	3 cut(s)	385, 561, 1463
BsiEI	CGRYCG	1 cut(s)	235
BsiWI	CGTACG	1 cut(s)	222
BslFI	GGGAC	1 cut(s)	1625
BslI	CCNNNNNNNGG	4 cut(s)	117, 333, 382, 1027
BsmAI	GTCTC	1 cut(s)	807
BsmFI	GGGAC	1 cut(s)	1625
BsmI	GAATGC	1 cut(s)	832
BsnI	GGCC	6 cut(s)	5, 121, 234, 1046, 1094, 1745
Bso31I	GGTCTC	1 cut(s)	807
Bsp1286I	GDGCHC	2 cut(s)	45, 1154
Bsp13I	TCCGGA	1 cut(s)	199
Bsp143I	GATC	5 cut(s)	732, 1387, 1410, 1511, 1531
Bsp68I	TCGCGA	1 cut(s)	912
BspANI	GGCC	6 cut(s)	5, 121, 234, 1046, 1094, 1745
BspCNI	CTCAG	1 cut(s)	1639
BspEI	TCCGGA	1 cut(s)	199
BspFNI	CGCG	4 cut(s)	167, 339, 378, 912
BspLI	GGNNCC	9 cut(s)	78, 84, 153, 387, 563, 1093, 1465, 1640, 1641
BspOI	GCTAGC	1 cut(s)	1223
BspPI	GGATC	2 cut(s)	727, 1395
BspT107I	GGYRCC	3 cut(s)	385, 561, 1463
BspTI	CTTAAG	1 cut(s)	548
BspTNI	GGTCTC	1 cut(s)	807
BsrFI	RCCGGY	2 cut(s)	234, 247
BsrI	ACTGG	2 cut(s)	849, 1701
BssAI	RCCGGY	2 cut(s)	234, 247
BssECI	CCNNGG	6 cut(s)	737, 1332, 1467, 1635, 1780, 1789
BssMI	GATC	5 cut(s)	732, 1387, 1410, 1511, 1531
BssNI	GRCGYC	1 cut(s)	562
BssT1I	CCWWGG	2 cut(s)	1467, 1780
Bst2UI	CCWGG	4 cut(s)	112, 739, 1790, 1811
Bst4CI	ACNGT	4 cut(s)	322, 643, 1333, 1822
Bst6I	CTCTTC	2 cut(s)	696, 1599
BstACI	GRCGYC	1 cut(s)	562
BstAFI	CTTAAG	1 cut(s)	548
BstAPI	GCANNNNNTGC	1 cut(s)	836
BstC8I	GCNNGC	6 cut(s)	242, 249, 341, 1221, 1542, 1743
BstDEI	CTNAG	4 cut(s)	963, 1022, 1515, 1647
BstDSI	CCRYGG	1 cut(s)	1332
BstEII	GGTNACC	2 cut(s)	322, 1805
BstENI	CCTNNNNNAGG	1 cut(s)	1025
BstF5I	GGATG	2 cut(s)	541, 661
BstFNI	CGCG	4 cut(s)	167, 339, 378, 912
BstH2I	RGCGCY	2 cut(s)	565, 981
BstHHI	GCGC	3 cut(s)	339, 564, 980
BstKTI	GATC	5 cut(s)	735, 1390, 1413, 1514, 1534
BstMAI	GTCTC	1 cut(s)	807
BstMBI	GATC	5 cut(s)	732, 1387, 1410, 1511, 1531
BstMCI	CGRYCG	1 cut(s)	235
BstNI	CCWGG	4 cut(s)	112, 739, 1790, 1811
BstNSI	RCATGY	1 cut(s)	1564
BstPI	GGTNACC	2 cut(s)	322, 1805
BstSCI	CCNGG	8 cut(s)	5, 110, 180, 737, 867, 1634, 1788, 1809
BstSFI	CTRYAG	1 cut(s)	1276
BstUI	CGCG	4 cut(s)	167, 339, 378, 912
BstV1I	GCAGC	4 cut(s)	8, 617, 1237, 1801
BstX2I	RGATCY	2 cut(s)	1387, 1511
BstYI	RGATCY	2 cut(s)	1387, 1511
BstZI	CGGCCG	1 cut(s)	232
BsuI	GTATCC	1 cut(s)	48
BsuRI	GGCC	6 cut(s)	5, 121, 234, 1046, 1094, 1745
BtgI	CCRYGG	1 cut(s)	1332
BtgZI	GCGATG	2 cut(s)	107, 834
BtsCI	GGATG	2 cut(s)	541, 661
BtsI	GCAGTG	1 cut(s)	306
BtsIMutI	CAGTG	4 cut(s)	306, 1317, 1664, 1694
BtuMI	TCGCGA	1 cut(s)	912
Cac8I	GCNNGC	6 cut(s)	242, 249, 341, 1221, 1542, 1743
CfoI	GCGC	3 cut(s)	339, 564, 980
Cfr10I	RCCGGY	2 cut(s)	234, 247
Cfr13I	GGNCC	3 cut(s)	1092, 1639, 1743
CseI	GACGC	2 cut(s)	13, 1346
Csp6I	GTAC	9 cut(s)	31, 163, 223, 618, 842, 1002, 1464, 1566, 1651
CviAII	CATG	5 cut(s)	609, 1561, 1574, 1578, 1660
CviQI	GTAC	9 cut(s)	31, 163, 223, 618, 842, 1002, 1464, 1566, 1651
DdeI	CTNAG	4 cut(s)	963, 1022, 1515, 1647
DinI	GGCGCC	1 cut(s)	563
DpnI	GATC	5 cut(s)	734, 1389, 1412, 1513, 1533
DpnII	GATC	5 cut(s)	732, 1387, 1410, 1511, 1531
DraI	TTTAAA	1 cut(s)	1618
DraIII	CACNNNGTG	1 cut(s)	277
EaeI	YGGCCR	3 cut(s)	3, 232, 1044
EagI	CGGCCG	1 cut(s)	232
Eam1104I	CTCTTC	2 cut(s)	696, 1599
EarI	CTCTTC	2 cut(s)	696, 1599
EclXI	CGGCCG	1 cut(s)	232
Eco130I	CCWWGG	2 cut(s)	1467, 1780
Eco24I	GRGCYC	2 cut(s)	45, 1154
Eco31I	GGTCTC	1 cut(s)	807
Eco32I	GATATC	1 cut(s)	1136
Eco47I	GGWCC	1 cut(s)	1639
Eco47III	AGCGCT	1 cut(s)	979
Eco52I	CGGCCG	1 cut(s)	232
Eco57I	CTGAAG	3 cut(s)	531, 610, 1688
Eco91I	GGTNACC	2 cut(s)	322, 1805
EcoNI	CCTNNNNNAGG	1 cut(s)	1025
EcoO109I	RGGNCCY	1 cut(s)	1639
EcoO65I	GGTNACC	2 cut(s)	322, 1805
EcoRI	GAATTC	1 cut(s)	914
EcoRII	CCWGG	4 cut(s)	110, 737, 1788, 1809
EcoRV	GATATC	1 cut(s)	1136
EcoT14I	CCWWGG	2 cut(s)	1467, 1780
EcoT22I	ATGCAT	1 cut(s)	1579
EcoT38I	GRGCYC	2 cut(s)	45, 1154
EgeI	GGCGCC	1 cut(s)	563
EheI	GGCGCC	1 cut(s)	563
ErhI	CCWWGG	2 cut(s)	1467, 1780
FaeI	CATG	5 cut(s)	612, 1564, 1577, 1581, 1663
FaqI	GGGAC	1 cut(s)	1625
FatI	CATG	5 cut(s)	608, 1560, 1573, 1577, 1659
FauI	CCCGC	2 cut(s)	802, 1734
FauNDI	CATATG	3 cut(s)	267, 442, 589
FbaI	TGATCA	1 cut(s)	1410
FblI	GTMKAC	2 cut(s)	228, 1722
Fnu4HI	GCNGC	8 cut(s)	22, 75, 168, 245, 376, 606, 1251, 1815
FokI	GGATG	2 cut(s)	528, 668
FriOI	GRGCYC	2 cut(s)	45, 1154
Fsp4HI	GCNGC	8 cut(s)	22, 75, 168, 245, 376, 606, 1251, 1815
FspBI	CTAG	3 cut(s)	413, 1220, 1656
GlaI	GCGC	3 cut(s)	338, 563, 979
GluI	GCNGC	8 cut(s)	22, 75, 168, 245, 376, 606, 1251, 1815
HaeII	RGCGCY	2 cut(s)	565, 981
HaeIII	GGCC	6 cut(s)	5, 121, 234, 1046, 1094, 1745
HgaI	GACGC	2 cut(s)	13, 1346
HhaI	GCGC	3 cut(s)	339, 564, 980
Hin1I	GRCGYC	1 cut(s)	562
Hin1II	CATG	5 cut(s)	612, 1564, 1577, 1581, 1663
Hin6I	GCGC	3 cut(s)	337, 562, 978
HinP1I	GCGC	3 cut(s)	337, 562, 978
HincII	GTYRAC	1 cut(s)	646
HindII	GTYRAC	1 cut(s)	646
HindIII	AAGCTT	1 cut(s)	1435
HinfI	GANTC	4 cut(s)	1265, 1315, 1355, 1754
HpaI	GTTAAC	1 cut(s)	646
HphI	GGTGA	1 cut(s)	316
Hpy166II	GTNNAC	8 cut(s)	163, 193, 229, 407, 646, 1336, 1653, 1723
Hpy188I	TCNGA	8 cut(s)	127, 156, 178, 210, 1140, 1648, 1710, 1753
Hpy188III	TCNNGA	8 cut(s)	200, 302, 695, 821, 911, 1352, 1398, 1825
Hpy8I	GTNNAC	8 cut(s)	163, 193, 229, 407, 646, 1336, 1653, 1723
Hpy99I	CGWCG	5 cut(s)	29, 91, 109, 127, 1100
HpyAV	CCTTC	4 cut(s)	394, 751, 1603, 1762
HpyCH4III	ACNGT	4 cut(s)	322, 643, 1333, 1822
HpyCH4IV	ACGT	1 cut(s)	225
HpyF3I	CTNAG	4 cut(s)	963, 1022, 1515, 1647
HpySE526I	ACGT	1 cut(s)	225
Hsp92I	GRCGYC	1 cut(s)	562
Hsp92II	CATG	5 cut(s)	612, 1564, 1577, 1581, 1663
HspAI	GCGC	3 cut(s)	337, 562, 978
KasI	GGCGCC	1 cut(s)	561
KflI	GGGWCCC	1 cut(s)	1639
Kpn2I	TCCGGA	1 cut(s)	199
KpnI	GGTACC	1 cut(s)	1467
KroI	GCCGGC	1 cut(s)	247
KroNI	GCCGGC	1 cut(s)	249
Ksp22I	TGATCA	1 cut(s)	1410
KspAI	GTTAAC	1 cut(s)	646
Kzo9I	GATC	5 cut(s)	732, 1387, 1410, 1511, 1531
LmnI	GCTCC	4 cut(s)	82, 88, 127, 157
Lsp1109I	GCAGC	4 cut(s)	8, 617, 1237, 1801
LweI	GCATC	3 cut(s)	857, 1237, 1313
MaeI	CTAG	3 cut(s)	413, 1220, 1656
MaeII	ACGT	1 cut(s)	225
MaeIII	GTNAC	5 cut(s)	316, 322, 1011, 1312, 1805
MalI	GATC	5 cut(s)	734, 1389, 1412, 1513, 1533
MboI	GATC	5 cut(s)	732, 1387, 1410, 1511, 1531
MboII	GAAGA	5 cut(s)	493, 683, 884, 1112, 1616
MfeI	CAATTG	1 cut(s)	1269
MflI	RGATCY	2 cut(s)	1387, 1511
MhlI	GDGCHC	2 cut(s)	45, 1154
MlsI	TGGCCA	1 cut(s)	1046
MluCI	AATT	9 cut(s)	11, 331, 465, 914, 967, 1062, 1227, 1269, 1700
MluNI	TGGCCA	1 cut(s)	1046
Mly113I	GGCGCC	1 cut(s)	562
MlyI	GAGTC	3 cut(s)	1274, 1309, 1763
MmeI	TCCRAC	4 cut(s)	105, 201, 710, 1731
Mox20I	TGGCCA	1 cut(s)	1046
Mph1103I	ATGCAT	1 cut(s)	1579
MreI	CGCCGGCG	1 cut(s)	247
MroI	TCCGGA	1 cut(s)	199
MroNI	GCCGGC	1 cut(s)	247
MroXI	GAANNNNTTC	1 cut(s)	761
MscI	TGGCCA	1 cut(s)	1046
MseI	TTAA	6 cut(s)	447, 549, 645, 1452, 1617, 1703
MslI	CAYNNNNRTG	1 cut(s)	1658
Msp20I	TGGCCA	1 cut(s)	1046
MspA1I	CMGCKG	2 cut(s)	21, 1741
MspCI	CTTAAG	1 cut(s)	548
MspR9I	CCNGG	8 cut(s)	7, 112, 182, 739, 869, 1636, 1790, 1811
MunI	CAATTG	1 cut(s)	1269
Mva1269I	GAATGC	1 cut(s)	832
MvaI	CCWGG	4 cut(s)	112, 739, 1790, 1811
MvnI	CGCG	4 cut(s)	167, 339, 378, 912
NaeI	GCCGGC	1 cut(s)	249
NarI	GGCGCC	1 cut(s)	562
NciI	CCSGG	4 cut(s)	7, 182, 869, 1636
NdeI	CATATG	3 cut(s)	267, 442, 589
NdeII	GATC	5 cut(s)	732, 1387, 1410, 1511, 1531
NgoMIV	GCCGGC	1 cut(s)	247
NheI	GCTAGC	1 cut(s)	1219
NlaIII	CATG	5 cut(s)	612, 1564, 1577, 1581, 1663
NlaIV	GGNNCC	9 cut(s)	78, 84, 153, 387, 563, 1093, 1465, 1640, 1641
NmuCI	GTSAC	3 cut(s)	316, 322, 1312
NruI	TCGCGA	1 cut(s)	912
NsiI	ATGCAT	1 cut(s)	1579
NspI	RCATGY	1 cut(s)	1564
PcsI	WCGNNNNNNNCGW	5 cut(s)	33, 95, 104, 113, 237
PctI	GAATGC	1 cut(s)	832
PdiI	GCCGGC	1 cut(s)	249
PdmI	GAANNNNTTC	1 cut(s)	761
PfeI	GAWTC	1 cut(s)	1355
Pfl23II	CGTACG	1 cut(s)	222
PkrI	GCNGC	8 cut(s)	23, 76, 169, 246, 377, 607, 1252, 1816
PleI	GAGTC	3 cut(s)	1273, 1309, 1762
PluTI	GGCGCC	1 cut(s)	565
PpsI	GAGTC	3 cut(s)	1273, 1309, 1762
PpuMI	RGGWCCY	1 cut(s)	1639
Psp5II	RGGWCCY	1 cut(s)	1639
Psp6I	CCWGG	4 cut(s)	110, 737, 1788, 1809
PspEI	GGTNACC	2 cut(s)	322, 1805
PspGI	CCWGG	4 cut(s)	110, 737, 1788, 1809
PspLI	CGTACG	1 cut(s)	222
PspN4I	GGNNCC	9 cut(s)	78, 84, 153, 387, 563, 1093, 1465, 1640, 1641
PspPI	GGNCC	3 cut(s)	1092, 1639, 1743
PspPPI	RGGWCCY	1 cut(s)	1639
PsuI	RGATCY	2 cut(s)	1387, 1511
PvuII	CAGCTG	1 cut(s)	21
RruI	TCGCGA	1 cut(s)	912
RsaI	GTAC	9 cut(s)	32, 164, 224, 619, 843, 1003, 1465, 1567, 1652
RsaNI	GTAC	9 cut(s)	31, 163, 223, 618, 842, 1002, 1464, 1566, 1651
RseI	CAYNNNNRTG	1 cut(s)	1658
SaqAI	TTAA	6 cut(s)	447, 549, 645, 1452, 1617, 1703
SatI	GCNGC	8 cut(s)	22, 75, 168, 245, 376, 606, 1251, 1815
Sau3AI	GATC	5 cut(s)	732, 1387, 1410, 1511, 1531
Sau96I	GGNCC	3 cut(s)	1092, 1639, 1743
ScaI	AGTACT	1 cut(s)	843
SchI	GAGTC	3 cut(s)	1274, 1309, 1763
ScrFI	CCNGG	8 cut(s)	7, 112, 182, 739, 869, 1636, 1790, 1811
SduI	GDGCHC	2 cut(s)	45, 1154
SfaNI	GCATC	3 cut(s)	857, 1237, 1313
SfcI	CTRYAG	1 cut(s)	1276
SfoI	GGCGCC	1 cut(s)	563
SgrAI	CRCCGGYG	1 cut(s)	247
SinI	GGWCC	1 cut(s)	1639
SmiMI	CAYNNNNRTG	1 cut(s)	1658
SmlI	CTYRAG	3 cut(s)	548, 821, 1361
SmoI	CTYRAG	3 cut(s)	548, 821, 1361
Sse9I	AATT	9 cut(s)	11, 331, 465, 914, 967, 1062, 1227, 1269, 1700
SspDI	GGCGCC	1 cut(s)	561
SspMI	CTAG	3 cut(s)	413, 1220, 1656
StyD4I	CCNGG	8 cut(s)	5, 110, 180, 737, 867, 1634, 1788, 1809
StyI	CCWWGG	2 cut(s)	1467, 1780
TaaI	ACNGT	4 cut(s)	322, 643, 1333, 1822
TaiI	ACGT	1 cut(s)	228
TaqI	TCGA	7 cut(s)	27, 98, 116, 1098, 1165, 1353, 1824
TasI	AATT	9 cut(s)	11, 331, 465, 914, 967, 1062, 1227, 1269, 1700
TatI	WGTACW	3 cut(s)	617, 841, 1650
TauI	GCSGC	4 cut(s)	77, 170, 247, 378
TfiI	GAWTC	1 cut(s)	1355
Tru1I	TTAA	6 cut(s)	447, 549, 645, 1452, 1617, 1703
Tru9I	TTAA	6 cut(s)	447, 549, 645, 1452, 1617, 1703
TscAI	CASTG	4 cut(s)	313, 1317, 1671, 1701
TseFI	GTSAC	3 cut(s)	316, 322, 1312
TseI	GCWGC	4 cut(s)	21, 605, 1250, 1814
Tsp45I	GTSAC	3 cut(s)	316, 322, 1312
TspDTI	ATGAA	9 cut(s)	485, 606, 624, 960, 1049, 1060, 1119, 1142, 1383
TspGWI	ACGGA	1 cut(s)	75
TspRI	CASTG	4 cut(s)	313, 1317, 1671, 1701
Vha464I	CTTAAG	1 cut(s)	548
VpaK11BI	GGWCC	1 cut(s)	1639
XagI	CCTNNNNNAGG	1 cut(s)	1025
XapI	RAATTY	1 cut(s)	914
XceI	RCATGY	1 cut(s)	1564
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1330
XmiI	GTMKAC	2 cut(s)	228, 1722
XmnI	GAANNNNTTC	1 cut(s)	761
XspI	CTAG	3 cut(s)	413, 1220, 1656
ZrmI	AGTACT	1 cut(s)	843
Zsp2I	ATGCAT	1 cut(s)	1579

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.