Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22450 AT3G22450 |
| fragaria_vesca | FvH4_4g15620 |
| malus_domestica | MD13G1193200.v1.1 MD16G1194100.v1.1 |
| prunus_persica | Prupe.1G013800_v2.0.a1 |
| pyrus_communis | pycom13g16550 pycom16g16390 |
| rosa_chinensis | RchiOBHm_Chr4g0416191 |
| rosa_laevigata | RLG00000008007 |
| rosa_multiflora | Rmu_sc0001145.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00360050 |
| rosa_rugosa | Rorug04G0139800 |
| rosa_samantha | Rh4AG201800 Rh4BG199200 Rh4CG214100 Rh4DG199000 |
| rosa_wichuraiana | Rw4G017060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 657 |
| AciI | CCGC | 3 cut(s) | 44, 155, 412 |
| AclWI | GGATC | 1 cut(s) | 479 |
| AcsI | RAATTY | 1 cut(s) | 794 |
| AcuI | CTGAAG | 2 cut(s) | 15, 926 |
| AcyI | GRCGYC | 1 cut(s) | 716 |
| AdeI | CACNNNGTG | 2 cut(s) | 745, 886 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 58, 344, 547, 905 |
| AgeI | ACCGGT | 1 cut(s) | 316 |
| AgsI | TTSAA | 3 cut(s) | 10, 431, 932 |
| AjnI | CCWGG | 1 cut(s) | 693 |
| Alw21I | GWGCWC | 1 cut(s) | 519 |
| AlwI | GGATC | 1 cut(s) | 479 |
| AoxI | GGCC | 2 cut(s) | 73, 768 |
| ApeKI | GCWGC | 3 cut(s) | 821, 824, 833 |
| ApoI | RAATTY | 1 cut(s) | 794 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 341, 373, 779, 811 |
| AseI | ATTAAT | 1 cut(s) | 966 |
| AsiGI | ACCGGT | 1 cut(s) | 316 |
| AspS9I | GGNCC | 3 cut(s) | 74, 671, 769 |
| AsuHPI | GGTGA | 4 cut(s) | 359, 731, 881, 988 |
| AvaII | GGWCC | 1 cut(s) | 671 |
| BanII | GRGCYC | 2 cut(s) | 64, 519 |
| BbsI | GAAGAC | 1 cut(s) | 459 |
| Bbv12I | GWGCWC | 1 cut(s) | 519 |
| BbvCI | CCTCAGC | 1 cut(s) | 641 |
| BbvI | GCAGC | 3 cut(s) | 811, 820, 833 |
| BccI | CCATC | 1 cut(s) | 114 |
| BceAI | ACGGC | 1 cut(s) | 670 |
| BciT130I | CCWGG | 1 cut(s) | 695 |
| BfaI | CTAG | 3 cut(s) | 248, 561, 813 |
| BisI | GCNGC | 3 cut(s) | 822, 825, 834 |
| BlsI | GCNGC | 3 cut(s) | 823, 826, 835 |
| Bme1390I | CCNGG | 1 cut(s) | 695 |
| Bme18I | GGWCC | 1 cut(s) | 671 |
| BmgT120I | GGNCC | 3 cut(s) | 74, 671, 769 |
| BmiI | GGNNCC | 1 cut(s) | 76 |
| BmrFI | CCNGG | 1 cut(s) | 695 |
| BmrI | ACTGGG | 1 cut(s) | 1002 |
| BmsI | GCATC | 2 cut(s) | 160, 208 |
| BmuI | ACTGGG | 1 cut(s) | 1002 |
| BpiI | GAAGAC | 1 cut(s) | 459 |
| Bpu10I | CCTNAGC | 1 cut(s) | 641 |
| BsaHI | GRCGYC | 1 cut(s) | 716 |
| BsaJI | CCNNGG | 1 cut(s) | 899 |
| BsaWI | WCCGGW | 1 cut(s) | 316 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 58, 344, 547, 905 |
| Bse118I | RCCGGY | 1 cut(s) | 316 |
| Bse1I | ACTGG | 3 cut(s) | 285, 750, 1008 |
| BseBI | CCWGG | 1 cut(s) | 695 |
| BseDI | CCNNGG | 1 cut(s) | 899 |
| BseGI | GGATG | 1 cut(s) | 487 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 58, 344, 547, 905 |
| BseMII | CTCAG | 3 cut(s) | 611, 632, 869 |
| BseNI | ACTGG | 3 cut(s) | 285, 750, 1008 |
| BseXI | GCAGC | 3 cut(s) | 811, 820, 833 |
| BshFI | GGCC | 2 cut(s) | 75, 770 |
| BshTI | ACCGGT | 1 cut(s) | 316 |
| BsiHKAI | GWGCWC | 1 cut(s) | 519 |
| BsiSI | CCGG | 1 cut(s) | 317 |
| BslFI | GGGAC | 1 cut(s) | 283 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 58, 344, 547, 905 |
| BsmFI | GGGAC | 1 cut(s) | 283 |
| BsnI | GGCC | 2 cut(s) | 75, 770 |
| Bsp1286I | GDGCHC | 2 cut(s) | 64, 519 |
| Bsp143I | GATC | 2 cut(s) | 484, 799 |
| BspACI | CCGC | 3 cut(s) | 44, 155, 412 |
| BspANI | GGCC | 2 cut(s) | 75, 770 |
| BspCNI | CTCAG | 3 cut(s) | 610, 633, 868 |
| BspLI | GGNNCC | 1 cut(s) | 76 |
| BspPI | GGATC | 1 cut(s) | 479 |
| BsrFI | RCCGGY | 1 cut(s) | 316 |
| BsrI | ACTGG | 3 cut(s) | 285, 750, 1008 |
| BssAI | RCCGGY | 1 cut(s) | 316 |
| BssECI | CCNNGG | 1 cut(s) | 899 |
| BssMI | GATC | 2 cut(s) | 484, 799 |
| BssNI | GRCGYC | 1 cut(s) | 716 |
| BssT1I | CCWWGG | 1 cut(s) | 899 |
| Bst2UI | CCWGG | 1 cut(s) | 695 |
| Bst6I | CTCTTC | 2 cut(s) | 426, 500 |
| BstACI | GRCGYC | 1 cut(s) | 716 |
| BstC8I | GCNNGC | 2 cut(s) | 730, 926 |
| BstDEI | CTNAG | 5 cut(s) | 471, 597, 641, 855, 1026 |
| BstEII | GGTNACC | 1 cut(s) | 347 |
| BstF5I | GGATG | 1 cut(s) | 487 |
| BstKTI | GATC | 2 cut(s) | 487, 802 |
| BstMBI | GATC | 2 cut(s) | 484, 799 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 830, 833, 842, 851, 860 |
| BstNI | CCWGG | 1 cut(s) | 695 |
| BstPI | GGTNACC | 1 cut(s) | 347 |
| BstSCI | CCNGG | 1 cut(s) | 693 |
| BstV1I | GCAGC | 3 cut(s) | 811, 820, 833 |
| BstV2I | GAAGAC | 1 cut(s) | 459 |
| BsuRI | GGCC | 2 cut(s) | 75, 770 |
| BtsCI | GGATG | 1 cut(s) | 487 |
| BtsI | GCAGTG | 1 cut(s) | 615 |
| BtsIMutI | CAGTG | 1 cut(s) | 615 |
| Cac8I | GCNNGC | 2 cut(s) | 730, 926 |
| Cfr10I | RCCGGY | 1 cut(s) | 316 |
| Cfr13I | GGNCC | 3 cut(s) | 74, 671, 769 |
| CseI | GACGC | 2 cut(s) | 264, 705 |
| CspAI | ACCGGT | 1 cut(s) | 316 |
| CviAII | CATG | 4 cut(s) | 215, 222, 680, 790 |
| DdeI | CTNAG | 5 cut(s) | 471, 597, 641, 855, 1026 |
| DpnI | GATC | 2 cut(s) | 486, 801 |
| DpnII | GATC | 2 cut(s) | 484, 799 |
| DraIII | CACNNNGTG | 2 cut(s) | 745, 886 |
| Eam1104I | CTCTTC | 2 cut(s) | 426, 500 |
| EarI | CTCTTC | 2 cut(s) | 426, 500 |
| Ecl136II | GAGCTC | 1 cut(s) | 517 |
| Eco130I | CCWWGG | 1 cut(s) | 899 |
| Eco24I | GRGCYC | 2 cut(s) | 64, 519 |
| Eco32I | GATATC | 1 cut(s) | 877 |
| Eco47I | GGWCC | 1 cut(s) | 671 |
| Eco53kI | GAGCTC | 1 cut(s) | 517 |
| Eco57I | CTGAAG | 2 cut(s) | 15, 926 |
| Eco91I | GGTNACC | 1 cut(s) | 347 |
| EcoICRI | GAGCTC | 1 cut(s) | 517 |
| EcoO109I | RGGNCCY | 1 cut(s) | 671 |
| EcoO65I | GGTNACC | 1 cut(s) | 347 |
| EcoRII | CCWGG | 1 cut(s) | 693 |
| EcoRV | GATATC | 1 cut(s) | 877 |
| EcoT14I | CCWWGG | 1 cut(s) | 899 |
| EcoT22I | ATGCAT | 1 cut(s) | 223 |
| EcoT38I | GRGCYC | 2 cut(s) | 64, 519 |
| ErhI | CCWWGG | 1 cut(s) | 899 |
| FaeI | CATG | 4 cut(s) | 218, 225, 683, 793 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 912, 944 |
| FaqI | GGGAC | 1 cut(s) | 283 |
| FatI | CATG | 4 cut(s) | 214, 221, 679, 789 |
| Fnu4HI | GCNGC | 3 cut(s) | 822, 825, 834 |
| FokI | GGATG | 1 cut(s) | 494 |
| FriOI | GRGCYC | 2 cut(s) | 64, 519 |
| Fsp4HI | GCNGC | 3 cut(s) | 822, 825, 834 |
| FspBI | CTAG | 3 cut(s) | 248, 561, 813 |
| GluI | GCNGC | 3 cut(s) | 822, 825, 834 |
| HaeIII | GGCC | 2 cut(s) | 75, 770 |
| HapII | CCGG | 1 cut(s) | 317 |
| HgaI | GACGC | 2 cut(s) | 264, 705 |
| Hin1I | GRCGYC | 1 cut(s) | 716 |
| Hin1II | CATG | 4 cut(s) | 218, 225, 683, 793 |
| HincII | GTYRAC | 1 cut(s) | 211 |
| HindII | GTYRAC | 1 cut(s) | 211 |
| HindIII | AAGCTT | 1 cut(s) | 926 |
| HinfI | GANTC | 4 cut(s) | 18, 281, 382, 646 |
| HpaII | CCGG | 1 cut(s) | 317 |
| HphI | GGTGA | 4 cut(s) | 359, 731, 881, 988 |
| Hpy166II | GTNNAC | 1 cut(s) | 211 |
| Hpy188I | TCNGA | 7 cut(s) | 115, 169, 187, 280, 298, 651, 858 |
| Hpy188III | TCNNGA | 3 cut(s) | 10, 548, 561 |
| Hpy8I | GTNNAC | 1 cut(s) | 211 |
| Hpy99I | CGWCG | 1 cut(s) | 280 |
| HpyAV | CCTTC | 5 cut(s) | 174, 472, 706, 914, 967 |
| HpyCH4V | TGCA | 2 cut(s) | 221, 732 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 830, 833, 842, 851, 860 |
| HpyF3I | CTNAG | 5 cut(s) | 471, 597, 641, 855, 1026 |
| Hsp92I | GRCGYC | 1 cut(s) | 716 |
| Hsp92II | CATG | 4 cut(s) | 218, 225, 683, 793 |
| Kzo9I | GATC | 2 cut(s) | 484, 799 |
| Lsp1109I | GCAGC | 3 cut(s) | 811, 820, 833 |
| LweI | GCATC | 2 cut(s) | 160, 208 |
| MaeI | CTAG | 3 cut(s) | 248, 561, 813 |
| MaeIII | GTNAC | 4 cut(s) | 287, 347, 745, 869 |
| MalI | GATC | 2 cut(s) | 486, 801 |
| MboI | GATC | 2 cut(s) | 484, 799 |
| MboII | GAAGA | 7 cut(s) | 443, 459, 472, 517, 643, 646, 1012 |
| MhlI | GDGCHC | 2 cut(s) | 64, 519 |
| MlyI | GAGTC | 1 cut(s) | 640 |
| MmeI | TCCRAC | 4 cut(s) | 108, 210, 258, 674 |
| Mph1103I | ATGCAT | 1 cut(s) | 223 |
| MseI | TTAA | 3 cut(s) | 498, 966, 983 |
| MslI | CAYNNNNRTG | 1 cut(s) | 968 |
| MspA1I | CMGCKG | 2 cut(s) | 157, 824 |
| MspI | CCGG | 1 cut(s) | 317 |
| MspR9I | CCNGG | 1 cut(s) | 695 |
| MvaI | CCWGG | 1 cut(s) | 695 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 830, 833, 842, 851, 860 |
| NdeII | GATC | 2 cut(s) | 484, 799 |
| NlaIII | CATG | 4 cut(s) | 218, 225, 683, 793 |
| NlaIV | GGNNCC | 1 cut(s) | 76 |
| NmuCI | GTSAC | 3 cut(s) | 347, 745, 869 |
| NsiI | ATGCAT | 1 cut(s) | 223 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 879 |
| PfeI | GAWTC | 3 cut(s) | 18, 281, 382 |
| PflFI | GACNNNGTC | 1 cut(s) | 274 |
| PinAI | ACCGGT | 1 cut(s) | 316 |
| PkrI | GCNGC | 3 cut(s) | 823, 826, 835 |
| PleI | GAGTC | 1 cut(s) | 640 |
| PpsI | GAGTC | 1 cut(s) | 640 |
| PpuMI | RGGWCCY | 1 cut(s) | 671 |
| PshBI | ATTAAT | 1 cut(s) | 966 |
| PsiI | TTATAA | 1 cut(s) | 657 |
| Psp124BI | GAGCTC | 1 cut(s) | 519 |
| Psp5II | RGGWCCY | 1 cut(s) | 671 |
| Psp6I | CCWGG | 1 cut(s) | 693 |
| PspEI | GGTNACC | 1 cut(s) | 347 |
| PspGI | CCWGG | 1 cut(s) | 693 |
| PspN4I | GGNNCC | 1 cut(s) | 76 |
| PspPI | GGNCC | 3 cut(s) | 74, 671, 769 |
| PspPPI | RGGWCCY | 1 cut(s) | 671 |
| PsyI | GACNNNGTC | 1 cut(s) | 274 |
| PvuII | CAGCTG | 1 cut(s) | 824 |
| RseI | CAYNNNNRTG | 1 cut(s) | 968 |
| SacI | GAGCTC | 1 cut(s) | 519 |
| SaqAI | TTAA | 3 cut(s) | 498, 966, 983 |
| SatI | GCNGC | 3 cut(s) | 822, 825, 834 |
| Sau3AI | GATC | 2 cut(s) | 484, 799 |
| Sau96I | GGNCC | 3 cut(s) | 74, 671, 769 |
| SchI | GAGTC | 1 cut(s) | 640 |
| ScrFI | CCNGG | 1 cut(s) | 695 |
| SduI | GDGCHC | 2 cut(s) | 64, 519 |
| SfaNI | GCATC | 2 cut(s) | 160, 208 |
| SinI | GGWCC | 1 cut(s) | 671 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 968 |
| SsiI | CCGC | 3 cut(s) | 44, 155, 412 |
| SspMI | CTAG | 3 cut(s) | 248, 561, 813 |
| SstI | GAGCTC | 1 cut(s) | 519 |
| StyD4I | CCNGG | 1 cut(s) | 693 |
| StyI | CCWWGG | 1 cut(s) | 899 |
| TaqI | TCGA | 7 cut(s) | 56, 134, 342, 385, 444, 710, 809 |
| TfiI | GAWTC | 3 cut(s) | 18, 281, 382 |
| Tru1I | TTAA | 3 cut(s) | 498, 966, 983 |
| Tru9I | TTAA | 3 cut(s) | 498, 966, 983 |
| TscAI | CASTG | 1 cut(s) | 622 |
| TseFI | GTSAC | 3 cut(s) | 347, 745, 869 |
| TseI | GCWGC | 3 cut(s) | 821, 824, 833 |
| Tsp45I | GTSAC | 3 cut(s) | 347, 745, 869 |
| TspDTI | ATGAA | 6 cut(s) | 134, 222, 327, 440, 621, 806 |
| TspGWI | ACGGA | 1 cut(s) | 278 |
| TspRI | CASTG | 1 cut(s) | 622 |
| Tth111I | GACNNNGTC | 1 cut(s) | 274 |
| VpaK11BI | GGWCC | 1 cut(s) | 671 |
| VspI | ATTAAT | 1 cut(s) | 966 |
| XapI | RAATTY | 1 cut(s) | 794 |
| XbaI | TCTAGA | 1 cut(s) | 560 |
| XspI | CTAG | 3 cut(s) | 248, 561, 813 |
| Zsp2I | ATGCAT | 1 cut(s) | 223 |