Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015314

Physical Location & Seq

Genomic Coordinates Reverse (-)

4472092 .. 4475029

Gene Structure 2938 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G063000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 390 bp

ATGGCCGACGAAGCCAACAGAGCTGCATTCTTTGAGATTCAAGGTCGCATGATTGAGCTCACGGCGAAACTGAAGCAGGTGCAGACGCAGATGAGGAACAAAGAAGGAGAAAAGAAGCGTGCTTTTCTAACCCTGGAGGAGCTGCGGCCTTTATCTGATGATGCAAATACTTACAAATCTATAGGGAGAACGTTTGTTTTAGAGCCCAAGTCAGTGTTGGTGAATGAACAGGAACAGAAGCTCAAGGACAGTGAGAGTGCAATTGCCTCACTGCAGATCTCAAAGGAATATATCGAGAAACAGGTTGCAGAGGTGGAGAACAACTTGAGGGAGCTGTTGAACCAAGATCCAGGTCTTGCTCGTCAGATAATGTCCATGAGTGTAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001775 GO:0002376 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006457 GO:0006996 GO:0007010 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0008150 GO:0009987 GO:0016043 GO:0021537 GO:0021549 GO:0022037 GO:0030029 GO:0030036 GO:0030900 GO:0030902 GO:0032501 GO:0032502 GO:0042113 GO:0044183 GO:0044424 GO:0044464 GO:0045321 GO:0046649 GO:0048513 GO:0048731 GO:0048856 GO:0060322 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Prefoldin_2

Protein Analysis

130

Amino Acids

14.76

Weight (kDa)

5.35

Isoelectric Point (pI)

51.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0015314)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07340 AT2G07340
fragaria_vesca	FvH4_4g05950
malus_domestica	MD13G1231800.v1.1 MD16G1236600.v1.1
prunus_persica	Prupe.1G063000_v2.0.a1
pyrus_communis	pycom13g20440 pycom16g19840
rosa_chinensis	RchiOBHm_Chr4g0397141
rosa_laevigata	RLG00000009443
rosa_multiflora	Rmu_sc0002312.1_g000044
rosa_roxburghii	Rroxscaffold_5G00342130
rosa_rugosa	Rorug03G0344600
rosa_samantha	Rh4AG077600 Rh4BG073100
rosa_wichuraiana	Rw4G006270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	67
Acc36I	ACCTGC	1 cut(s)	67
AciI	CCGC	1 cut(s)	145
AclI	AACGTT	1 cut(s)	191
AclWI	GGATC	1 cut(s)	341
AcoI	YGGCCR	1 cut(s)	3
AcuI	CTGAAG	1 cut(s)	92
AgsI	TTSAA	2 cut(s)	41, 340
AjnI	CCWGG	2 cut(s)	132, 349
AluBI	AGCT	5 cut(s)	23, 58, 142, 241, 334
AluI	AGCT	5 cut(s)	23, 58, 142, 241, 334
Alw21I	GWGCWC	1 cut(s)	60
AlwI	GGATC	1 cut(s)	341
AoxI	GGCC	2 cut(s)	3, 146
ApeKI	GCWGC	2 cut(s)	23, 142
AsuHPI	GGTGA	1 cut(s)	232
BanII	GRGCYC	2 cut(s)	60, 207
Bbv12I	GWGCWC	1 cut(s)	60
BbvI	GCAGC	2 cut(s)	10, 129
BceAI	ACGGC	1 cut(s)	78
BciT130I	CCWGG	2 cut(s)	134, 351
BfmI	CTRYAG	2 cut(s)	180, 272
BfuAI	ACCTGC	1 cut(s)	67
BglII	AGATCT	1 cut(s)	276
BisI	GCNGC	3 cut(s)	24, 143, 146
BlsI	GCNGC	3 cut(s)	25, 144, 147
Bme1390I	CCNGG	2 cut(s)	134, 351
BmrFI	CCNGG	2 cut(s)	134, 351
BmsI	GCATC	1 cut(s)	151
BpmI	CTGGAG	1 cut(s)	155
BpuEI	CTTGAG	2 cut(s)	227, 346
BsaJI	CCNNGG	1 cut(s)	132
BseBI	CCWGG	2 cut(s)	134, 351
BseDI	CCNNGG	1 cut(s)	132
BseRI	GAGGAG	1 cut(s)	152
BseXI	GCAGC	2 cut(s)	10, 129
BsgI	GTGCAG	1 cut(s)	101
BshFI	GGCC	2 cut(s)	5, 148
BsiHKAI	GWGCWC	1 cut(s)	60
BsmI	GAATGC	1 cut(s)	26
BsnI	GGCC	2 cut(s)	5, 148
Bsp1286I	GDGCHC	2 cut(s)	60, 207
Bsp143I	GATC	2 cut(s)	276, 346
BspACI	CCGC	1 cut(s)	145
BspANI	GGCC	2 cut(s)	5, 148
BspMAI	CTGCAG	1 cut(s)	276
BspMI	ACCTGC	1 cut(s)	67
BspPI	GGATC	1 cut(s)	341
BssECI	CCNNGG	1 cut(s)	132
BssMI	GATC	2 cut(s)	276, 346
Bst2UI	CCWGG	2 cut(s)	134, 351
Bst4CI	ACNGT	1 cut(s)	251
BstC8I	GCNNGC	1 cut(s)	120
BstKTI	GATC	2 cut(s)	279, 349
BstMBI	GATC	2 cut(s)	276, 346
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 20
BstNI	CCWGG	2 cut(s)	134, 351
BstSCI	CCNGG	2 cut(s)	132, 349
BstSFI	CTRYAG	2 cut(s)	180, 272
BstV1I	GCAGC	2 cut(s)	10, 129
BstX2I	RGATCY	2 cut(s)	276, 346
BstYI	RGATCY	2 cut(s)	276, 346
BsuRI	GGCC	2 cut(s)	5, 148
BtsI	GCAGTG	1 cut(s)	269
BtsIMutI	CAGTG	3 cut(s)	219, 256, 269
BveI	ACCTGC	1 cut(s)	67
Cac8I	GCNNGC	1 cut(s)	120
CseI	GACGC	1 cut(s)	94
CviAII	CATG	2 cut(s)	49, 376
CviJI	RGCY	9 cut(s)	5, 14, 23, 58, 142, 148, 205, 241, 334
CviKI_1	RGCY	9 cut(s)	5, 14, 23, 58, 142, 148, 205, 241, 334
DpnI	GATC	2 cut(s)	278, 348
DpnII	GATC	2 cut(s)	276, 346
EaeI	YGGCCR	1 cut(s)	3
Ecl136II	GAGCTC	1 cut(s)	58
Eco24I	GRGCYC	2 cut(s)	60, 207
Eco53kI	GAGCTC	1 cut(s)	58
Eco57I	CTGAAG	1 cut(s)	92
EcoICRI	GAGCTC	1 cut(s)	58
EcoRII	CCWGG	2 cut(s)	132, 349
EcoT38I	GRGCYC	2 cut(s)	60, 207
FaeI	CATG	2 cut(s)	52, 379
FaiI	YATR	4 cut(s)	50, 182, 291, 377
FatI	CATG	2 cut(s)	48, 375
Fnu4HI	GCNGC	3 cut(s)	24, 143, 146
FriOI	GRGCYC	2 cut(s)	60, 207
Fsp4HI	GCNGC	3 cut(s)	24, 143, 146
GluI	GCNGC	3 cut(s)	24, 143, 146
GsuI	CTGGAG	1 cut(s)	155
HaeIII	GGCC	2 cut(s)	5, 148
HgaI	GACGC	1 cut(s)	94
Hin1II	CATG	2 cut(s)	52, 379
HinfI	GANTC	1 cut(s)	37
HphI	GGTGA	1 cut(s)	232
Hpy188I	TCNGA	2 cut(s)	157, 366
Hpy188III	TCNNGA	1 cut(s)	295
Hpy99I	CGWCG	1 cut(s)	11
HpyAV	CCTTC	1 cut(s)	98
HpyCH4III	ACNGT	1 cut(s)	251
HpyCH4IV	ACGT	1 cut(s)	191
HpyCH4V	TGCA	6 cut(s)	26, 82, 164, 260, 274, 308
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 20
HpySE526I	ACGT	1 cut(s)	191
Hsp92II	CATG	2 cut(s)	52, 379
Kzo9I	GATC	2 cut(s)	276, 346
LmnI	GCTCC	2 cut(s)	139, 331
LpnPI	CCDG	7 cut(s)	62, 119, 146, 215, 287, 336, 363
Lsp1109I	GCAGC	2 cut(s)	10, 129
LweI	GCATC	1 cut(s)	151
MaeII	ACGT	1 cut(s)	191
MalI	GATC	2 cut(s)	278, 348
MboI	GATC	2 cut(s)	276, 346
MfeI	CAATTG	1 cut(s)	261
MflI	RGATCY	2 cut(s)	276, 346
MhlI	GDGCHC	2 cut(s)	60, 207
MluCI	AATT	1 cut(s)	261
MnlI	CCTC	5 cut(s)	87, 130, 277, 304, 321
MspR9I	CCNGG	2 cut(s)	134, 351
MunI	CAATTG	1 cut(s)	261
Mva1269I	GAATGC	1 cut(s)	26
MvaI	CCWGG	2 cut(s)	134, 351
MwoI	GCNNNNNNNGC	2 cut(s)	11, 20
NdeII	GATC	2 cut(s)	276, 346
NlaIII	CATG	2 cut(s)	52, 379
PaqCI	CACCTGC	1 cut(s)	67
PctI	GAATGC	1 cut(s)	26
PfeI	GAWTC	1 cut(s)	37
PkrI	GCNGC	3 cut(s)	25, 144, 147
Psp124BI	GAGCTC	1 cut(s)	60
Psp1406I	AACGTT	1 cut(s)	191
Psp6I	CCWGG	2 cut(s)	132, 349
PspGI	CCWGG	2 cut(s)	132, 349
PstI	CTGCAG	1 cut(s)	276
PsuI	RGATCY	2 cut(s)	276, 346
SacI	GAGCTC	1 cut(s)	60
SatI	GCNGC	3 cut(s)	24, 143, 146
Sau3AI	GATC	2 cut(s)	276, 346
ScrFI	CCNGG	2 cut(s)	134, 351
SduI	GDGCHC	2 cut(s)	60, 207
SfaNI	GCATC	1 cut(s)	151
SfcI	CTRYAG	2 cut(s)	180, 272
SmlI	CTYRAG	2 cut(s)	242, 325
SmoI	CTYRAG	2 cut(s)	242, 325
Sse9I	AATT	1 cut(s)	261
SsiI	CCGC	1 cut(s)	145
SstI	GAGCTC	1 cut(s)	60
StyD4I	CCNGG	2 cut(s)	132, 349
TaaI	ACNGT	1 cut(s)	251
TaiI	ACGT	1 cut(s)	194
TaqI	TCGA	1 cut(s)	294
TasI	AATT	1 cut(s)	261
TauI	GCSGC	1 cut(s)	148
TfiI	GAWTC	1 cut(s)	37
TscAI	CASTG	3 cut(s)	219, 256, 276
TseI	GCWGC	2 cut(s)	23, 142
TspDTI	ATGAA	1 cut(s)	240
TspRI	CASTG	3 cut(s)	219, 256, 276
XcmI	CCANNNNNNNNNTGG	1 cut(s)	214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.