tRNA-specific adenosine deaminase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48175 AT1G48175 AT1G48175 AT1G48175 AT1G48175 AT1G48175 |
| fragaria_vesca | FvH4_4g07280 FvH4_5g15360 FvH4_5g15360 |
| malus_domestica | MD13G1241600.v1.1 |
| prunus_persica | Prupe.1G075100_v2.0.a1 |
| pyrus_communis | pycom13g21350 |
| rosa_chinensis | RchiOBHm_Chr4g0399541 RchiOBHm_Chr4g0399571 RchiOBHm_Chr7g0180711 |
| rosa_laevigata | RLG00000005238 RLG00000009262 |
| rosa_multiflora | Rmu_sc0002285.1_g000033 |
| rosa_roxburghii | Rroxscaffold_3G00272630 Rroxscaffold_5G00344420 |
| rosa_rugosa | Rorug04G0017400 Rorug06G0435100 |
| rosa_samantha | Rh4AG095200 Rh4BG092600 Rh4CG103700 Rh4DG087600 Rh7AG036800 Rh7BG036600 Rh7CG038300 Rh7DG036800 |
| rosa_wichuraiana | Rw4G007830 Rw7G003040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 314, 375 |
| AclWI | GGATC | 1 cut(s) | 391 |
| AcsI | RAATTY | 2 cut(s) | 258, 368 |
| AfaI | GTAC | 1 cut(s) | 23 |
| AflIII | ACRYGT | 1 cut(s) | 287 |
| AgsI | TTSAA | 3 cut(s) | 119, 267, 457 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 84, 116 |
| AluBI | AGCT | 2 cut(s) | 411, 437 |
| AluI | AGCT | 2 cut(s) | 411, 437 |
| Alw21I | GWGCWC | 1 cut(s) | 439 |
| Alw26I | GTCTC | 2 cut(s) | 155, 496 |
| AlwI | GGATC | 1 cut(s) | 391 |
| Ama87I | CYCGRG | 1 cut(s) | 11 |
| AoxI | GGCC | 1 cut(s) | 548 |
| ApeKI | GCWGC | 1 cut(s) | 311 |
| ApoI | RAATTY | 2 cut(s) | 258, 368 |
| AsuHPI | GGTGA | 1 cut(s) | 458 |
| AvaI | CYCGRG | 1 cut(s) | 11 |
| BanII | GRGCYC | 1 cut(s) | 439 |
| Bbv12I | GWGCWC | 1 cut(s) | 439 |
| BbvI | GCAGC | 1 cut(s) | 323 |
| BccI | CCATC | 2 cut(s) | 116, 184 |
| BcoDI | GTCTC | 2 cut(s) | 155, 496 |
| BfmI | CTRYAG | 1 cut(s) | 57 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 547 |
| BisI | GCNGC | 2 cut(s) | 312, 315 |
| BlsI | GCNGC | 2 cut(s) | 313, 316 |
| BmeT110I | CYCGRG | 1 cut(s) | 11 |
| BmsI | GCATC | 2 cut(s) | 146, 488 |
| BpuEI | CTTGAG | 2 cut(s) | 233, 388 |
| Bse3DI | GCAATG | 3 cut(s) | 367, 395, 469 |
| BseMI | GCAATG | 3 cut(s) | 367, 395, 469 |
| BseMII | CTCAG | 2 cut(s) | 150, 405 |
| BseXI | GCAGC | 1 cut(s) | 323 |
| BsgI | GTGCAG | 1 cut(s) | 330 |
| BshFI | GGCC | 1 cut(s) | 550 |
| BsiHKAI | GWGCWC | 1 cut(s) | 439 |
| BsiHKCI | CYCGRG | 1 cut(s) | 11 |
| BsmAI | GTCTC | 2 cut(s) | 155, 496 |
| BsnI | GGCC | 1 cut(s) | 550 |
| BsoBI | CYCGRG | 1 cut(s) | 11 |
| Bsp1286I | GDGCHC | 1 cut(s) | 439 |
| Bsp143I | GATC | 1 cut(s) | 383 |
| BspACI | CCGC | 2 cut(s) | 314, 375 |
| BspANI | GGCC | 1 cut(s) | 550 |
| BspCNI | CTCAG | 2 cut(s) | 151, 406 |
| BspPI | GGATC | 1 cut(s) | 391 |
| BsrDI | GCAATG | 3 cut(s) | 367, 395, 469 |
| BssMI | GATC | 1 cut(s) | 383 |
| Bst4CI | ACNGT | 1 cut(s) | 243 |
| Bst6I | CTCTTC | 1 cut(s) | 12 |
| BstC8I | GCNNGC | 1 cut(s) | 183 |
| BstDEI | CTNAG | 2 cut(s) | 159, 414 |
| BstKTI | GATC | 1 cut(s) | 386 |
| BstMAI | GTCTC | 2 cut(s) | 155, 496 |
| BstMBI | GATC | 1 cut(s) | 383 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 74, 485, 547, 563 |
| BstNSI | RCATGY | 2 cut(s) | 185, 291 |
| BstSFI | CTRYAG | 1 cut(s) | 57 |
| BstV1I | GCAGC | 1 cut(s) | 323 |
| BsuRI | GGCC | 1 cut(s) | 550 |
| BtsI | GCAGTG | 1 cut(s) | 224 |
| BtsIMutI | CAGTG | 1 cut(s) | 224 |
| Cac8I | GCNNGC | 1 cut(s) | 183 |
| Csp6I | GTAC | 1 cut(s) | 22 |
| CviAII | CATG | 3 cut(s) | 182, 288, 297 |
| CviQI | GTAC | 1 cut(s) | 22 |
| DdeI | CTNAG | 2 cut(s) | 159, 414 |
| DpnI | GATC | 1 cut(s) | 385 |
| DpnII | GATC | 1 cut(s) | 383 |
| Eam1104I | CTCTTC | 1 cut(s) | 12 |
| EarI | CTCTTC | 1 cut(s) | 12 |
| Ecl136II | GAGCTC | 1 cut(s) | 437 |
| Eco147I | AGGCCT | 1 cut(s) | 550 |
| Eco24I | GRGCYC | 1 cut(s) | 439 |
| Eco53kI | GAGCTC | 1 cut(s) | 437 |
| Eco88I | CYCGRG | 1 cut(s) | 11 |
| EcoICRI | GAGCTC | 1 cut(s) | 437 |
| EcoT38I | GRGCYC | 1 cut(s) | 439 |
| FaeI | CATG | 3 cut(s) | 185, 291, 300 |
| FatI | CATG | 3 cut(s) | 181, 287, 296 |
| FauI | CCCGC | 1 cut(s) | 368 |
| Fnu4HI | GCNGC | 2 cut(s) | 312, 315 |
| FriOI | GRGCYC | 1 cut(s) | 439 |
| Fsp4HI | GCNGC | 2 cut(s) | 312, 315 |
| GluI | GCNGC | 2 cut(s) | 312, 315 |
| HaeIII | GGCC | 1 cut(s) | 550 |
| Hin1II | CATG | 3 cut(s) | 185, 291, 300 |
| HinfI | GANTC | 1 cut(s) | 453 |
| HphI | GGTGA | 1 cut(s) | 458 |
| Hpy166II | GTNNAC | 2 cut(s) | 275, 293 |
| Hpy188I | TCNGA | 3 cut(s) | 247, 415, 484 |
| Hpy188III | TCNNGA | 2 cut(s) | 141, 212 |
| Hpy8I | GTNNAC | 2 cut(s) | 275, 293 |
| HpyAV | CCTTC | 2 cut(s) | 218, 443 |
| HpyCH4III | ACNGT | 1 cut(s) | 243 |
| HpyCH4V | TGCA | 4 cut(s) | 185, 311, 400, 462 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 74, 485, 547, 563 |
| HpyF3I | CTNAG | 2 cut(s) | 159, 414 |
| Hsp92II | CATG | 3 cut(s) | 185, 291, 300 |
| Kzo9I | GATC | 1 cut(s) | 383 |
| LmnI | GCTCC | 3 cut(s) | 434, 442, 538 |
| LpnPI | CCDG | 6 cut(s) | 39, 50, 111, 126, 503, 548 |
| Lsp1109I | GCAGC | 1 cut(s) | 323 |
| LweI | GCATC | 2 cut(s) | 146, 488 |
| MaeIII | GTNAC | 1 cut(s) | 283 |
| MalI | GATC | 1 cut(s) | 385 |
| MboI | GATC | 1 cut(s) | 383 |
| MboII | GAAGA | 3 cut(s) | 29, 131, 156 |
| MhlI | GDGCHC | 1 cut(s) | 439 |
| MluCI | AATT | 2 cut(s) | 258, 368 |
| MnlI | CCTC | 6 cut(s) | 98, 225, 437, 461, 552, 561 |
| MspA1I | CMGCKG | 1 cut(s) | 314 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 74, 485, 547, 563 |
| NdeII | GATC | 1 cut(s) | 383 |
| NlaIII | CATG | 3 cut(s) | 185, 291, 300 |
| NspI | RCATGY | 2 cut(s) | 185, 291 |
| PaeI | GCATGC | 1 cut(s) | 185 |
| PceI | AGGCCT | 1 cut(s) | 550 |
| PciI | ACATGT | 1 cut(s) | 287 |
| PfeI | GAWTC | 1 cut(s) | 453 |
| PkrI | GCNGC | 2 cut(s) | 313, 316 |
| PscI | ACATGT | 1 cut(s) | 287 |
| Psp124BI | GAGCTC | 1 cut(s) | 439 |
| RsaI | GTAC | 1 cut(s) | 23 |
| RsaNI | GTAC | 1 cut(s) | 22 |
| SacI | GAGCTC | 1 cut(s) | 439 |
| SatI | GCNGC | 2 cut(s) | 312, 315 |
| Sau3AI | GATC | 1 cut(s) | 383 |
| SduI | GDGCHC | 1 cut(s) | 439 |
| SetI | ASST | 5 cut(s) | 75, 132, 413, 439, 448 |
| SfaNI | GCATC | 2 cut(s) | 146, 488 |
| SfcI | CTRYAG | 1 cut(s) | 57 |
| SmlI | CTYRAG | 2 cut(s) | 212, 403 |
| SmoI | CTYRAG | 2 cut(s) | 212, 403 |
| SphI | GCATGC | 1 cut(s) | 185 |
| Sse9I | AATT | 2 cut(s) | 258, 368 |
| SseBI | AGGCCT | 1 cut(s) | 550 |
| SsiI | CCGC | 2 cut(s) | 314, 375 |
| SspI | AATATT | 1 cut(s) | 390 |
| SstI | GAGCTC | 1 cut(s) | 439 |
| StuI | AGGCCT | 1 cut(s) | 550 |
| TaaI | ACNGT | 1 cut(s) | 243 |
| TaqI | TCGA | 2 cut(s) | 90, 151 |
| TasI | AATT | 2 cut(s) | 258, 368 |
| TauI | GCSGC | 1 cut(s) | 317 |
| TfiI | GAWTC | 1 cut(s) | 453 |
| TscAI | CASTG | 1 cut(s) | 224 |
| TseI | GCWGC | 1 cut(s) | 311 |
| TspDTI | ATGAA | 1 cut(s) | 316 |
| TspRI | CASTG | 1 cut(s) | 224 |
| XapI | RAATTY | 2 cut(s) | 258, 368 |
| XceI | RCATGY | 2 cut(s) | 185, 291 |