F-box-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49610 |
| fragaria_vesca | FvH4_4g20690 |
| malus_domestica | MD13G1148700.v1.1 MD16G1149000.v1.1 |
| prunus_persica | Prupe.1G112700_v2.0.a1 |
| pyrus_communis | pycom13g12800 pycom16g12720 |
| rosa_chinensis | RchiOBHm_Chr4g0426111 |
| rosa_laevigata | RLG00000007318 |
| rosa_multiflora | Rmu_co8375493.1_g000001 Rmu_ssc0000281.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00368100 |
| rosa_rugosa | Rorug04G0209100 |
| rosa_samantha | Rh4AG265600 Rh4BG271700 Rh4CG284600 Rh4DG267800 |
| rosa_wichuraiana | Rw4G022950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 38 |
| AccIII | TCCGGA | 1 cut(s) | 28 |
| AciI | CCGC | 1 cut(s) | 741 |
| AclWI | GGATC | 1 cut(s) | 211 |
| AcsI | RAATTY | 4 cut(s) | 4, 48, 251, 819 |
| AfaI | GTAC | 4 cut(s) | 146, 505, 1004, 1040 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 335, 802 |
| AgsI | TTSAA | 4 cut(s) | 47, 57, 271, 376 |
| AjnI | CCWGG | 1 cut(s) | 901 |
| AleI | CACNNNNGTG | 1 cut(s) | 440 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 584, 616 |
| AluBI | AGCT | 1 cut(s) | 1020 |
| AluI | AGCT | 1 cut(s) | 1020 |
| Alw21I | GWGCWC | 2 cut(s) | 646, 1064 |
| AlwI | GGATC | 1 cut(s) | 211 |
| Aor13HI | TCCGGA | 1 cut(s) | 28 |
| AoxI | GGCC | 3 cut(s) | 432, 450, 518 |
| ApoI | RAATTY | 4 cut(s) | 4, 48, 251, 819 |
| AspS9I | GGNCC | 1 cut(s) | 793 |
| AsuHPI | GGTGA | 5 cut(s) | 440, 491, 595, 874, 941 |
| AvaII | GGWCC | 1 cut(s) | 793 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 986, 1018 |
| BauI | CACGAG | 1 cut(s) | 984 |
| Bbv12I | GWGCWC | 2 cut(s) | 646, 1064 |
| BccI | CCATC | 3 cut(s) | 419, 518, 770 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 392, 426 |
| BciT130I | CCWGG | 1 cut(s) | 903 |
| BclI | TGATCA | 1 cut(s) | 595 |
| BfaI | CTAG | 3 cut(s) | 321, 440, 944 |
| Bme1390I | CCNGG | 1 cut(s) | 903 |
| Bme18I | GGWCC | 1 cut(s) | 793 |
| BmgT120I | GGNCC | 1 cut(s) | 793 |
| BmrFI | CCNGG | 1 cut(s) | 903 |
| BmsI | GCATC | 1 cut(s) | 796 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 989, 1021 |
| BsaBI | GATNNNNATC | 1 cut(s) | 208 |
| BsaWI | WCCGGW | 1 cut(s) | 28 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 335, 802 |
| Bse118I | RCCGGY | 1 cut(s) | 491 |
| Bse1I | ACTGG | 1 cut(s) | 931 |
| Bse8I | GATNNNNATC | 1 cut(s) | 208 |
| BseAI | TCCGGA | 1 cut(s) | 28 |
| BseBI | CCWGG | 1 cut(s) | 903 |
| BseGI | GGATG | 4 cut(s) | 529, 598, 811, 819 |
| BseJI | GATNNNNATC | 1 cut(s) | 208 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 335, 802 |
| BseMII | CTCAG | 1 cut(s) | 546 |
| BseNI | ACTGG | 1 cut(s) | 931 |
| BshFI | GGCC | 3 cut(s) | 434, 452, 520 |
| BsiHKAI | GWGCWC | 2 cut(s) | 646, 1064 |
| BsiSI | CCGG | 3 cut(s) | 29, 492, 521 |
| BslFI | GGGAC | 1 cut(s) | 541 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 335, 802 |
| BsmFI | GGGAC | 1 cut(s) | 541 |
| BsnI | GGCC | 3 cut(s) | 434, 452, 520 |
| Bsp1286I | GDGCHC | 2 cut(s) | 646, 1064 |
| Bsp13I | TCCGGA | 1 cut(s) | 28 |
| Bsp1407I | TGTACA | 1 cut(s) | 144 |
| Bsp143I | GATC | 3 cut(s) | 203, 209, 595 |
| BspACI | CCGC | 1 cut(s) | 741 |
| BspANI | GGCC | 3 cut(s) | 434, 452, 520 |
| BspCNI | CTCAG | 1 cut(s) | 547 |
| BspEI | TCCGGA | 1 cut(s) | 28 |
| BspPI | GGATC | 1 cut(s) | 211 |
| BspQI | GCTCTTC | 1 cut(s) | 651 |
| BsrFI | RCCGGY | 1 cut(s) | 491 |
| BsrGI | TGTACA | 1 cut(s) | 144 |
| BsrI | ACTGG | 1 cut(s) | 931 |
| BssAI | RCCGGY | 1 cut(s) | 491 |
| BssMI | GATC | 3 cut(s) | 203, 209, 595 |
| BssSI | CACGAG | 1 cut(s) | 984 |
| Bst2BI | CACGAG | 1 cut(s) | 984 |
| Bst2UI | CCWGG | 1 cut(s) | 903 |
| Bst4CI | ACNGT | 3 cut(s) | 94, 503, 871 |
| Bst6I | CTCTTC | 1 cut(s) | 651 |
| BstAUI | TGTACA | 1 cut(s) | 144 |
| BstC8I | GCNNGC | 1 cut(s) | 454 |
| BstDEI | CTNAG | 4 cut(s) | 162, 259, 555, 878 |
| BstF5I | GGATG | 4 cut(s) | 529, 598, 811, 819 |
| BstKTI | GATC | 3 cut(s) | 206, 212, 598 |
| BstMBI | GATC | 3 cut(s) | 203, 209, 595 |
| BstNI | CCWGG | 1 cut(s) | 903 |
| BstNSI | RCATGY | 2 cut(s) | 407, 1052 |
| BstSCI | CCNGG | 1 cut(s) | 901 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 178, 442 |
| BsuRI | GGCC | 3 cut(s) | 434, 452, 520 |
| BtsCI | GGATG | 4 cut(s) | 529, 598, 811, 819 |
| BtsIMutI | CAGTG | 1 cut(s) | 876 |
| Cac8I | GCNNGC | 1 cut(s) | 454 |
| Cfr10I | RCCGGY | 1 cut(s) | 491 |
| Cfr13I | GGNCC | 1 cut(s) | 793 |
| Csp6I | GTAC | 4 cut(s) | 145, 504, 1003, 1039 |
| CviAII | CATG | 4 cut(s) | 172, 297, 404, 1049 |
| CviJI | RGCY | 6 cut(s) | 293, 434, 452, 491, 520, 1020 |
| CviKI_1 | RGCY | 6 cut(s) | 293, 434, 452, 491, 520, 1020 |
| CviQI | GTAC | 4 cut(s) | 145, 504, 1003, 1039 |
| DdeI | CTNAG | 4 cut(s) | 162, 259, 555, 878 |
| DpnI | GATC | 3 cut(s) | 205, 211, 597 |
| DpnII | GATC | 3 cut(s) | 203, 209, 595 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 38 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 38 |
| Eam1104I | CTCTTC | 1 cut(s) | 651 |
| EarI | CTCTTC | 1 cut(s) | 651 |
| Eco47I | GGWCC | 1 cut(s) | 793 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoRII | CCWGG | 1 cut(s) | 901 |
| EcoT22I | ATGCAT | 1 cut(s) | 1054 |
| FaeI | CATG | 4 cut(s) | 175, 300, 407, 1052 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 27, 59 |
| FaqI | GGGAC | 1 cut(s) | 541 |
| FatI | CATG | 4 cut(s) | 171, 296, 403, 1048 |
| FauI | CCCGC | 1 cut(s) | 734 |
| FauNDI | CATATG | 2 cut(s) | 609, 917 |
| FbaI | TGATCA | 1 cut(s) | 595 |
| FokI | GGATG | 4 cut(s) | 536, 605, 818, 826 |
| FspBI | CTAG | 3 cut(s) | 321, 440, 944 |
| HaeIII | GGCC | 3 cut(s) | 434, 452, 520 |
| HapII | CCGG | 3 cut(s) | 29, 492, 521 |
| Hin1II | CATG | 4 cut(s) | 175, 300, 407, 1052 |
| HincII | GTYRAC | 2 cut(s) | 229, 657 |
| HindII | GTYRAC | 2 cut(s) | 229, 657 |
| HinfI | GANTC | 9 cut(s) | 60, 194, 409, 551, 557, 619, 770, 874, 982 |
| HpaII | CCGG | 3 cut(s) | 29, 492, 521 |
| HphI | GGTGA | 5 cut(s) | 440, 491, 595, 874, 941 |
| Hpy166II | GTNNAC | 5 cut(s) | 101, 229, 343, 603, 657 |
| Hpy188I | TCNGA | 9 cut(s) | 124, 193, 219, 237, 250, 556, 775, 805, 1059 |
| Hpy188III | TCNNGA | 7 cut(s) | 29, 57, 82, 207, 590, 747, 796 |
| Hpy8I | GTNNAC | 5 cut(s) | 101, 229, 343, 603, 657 |
| HpyAV | CCTTC | 2 cut(s) | 53, 988 |
| HpyCH4III | ACNGT | 3 cut(s) | 94, 503, 871 |
| HpyCH4V | TGCA | 3 cut(s) | 354, 456, 1052 |
| HpyF3I | CTNAG | 4 cut(s) | 162, 259, 555, 878 |
| Hsp92II | CATG | 4 cut(s) | 175, 300, 407, 1052 |
| Kpn2I | TCCGGA | 1 cut(s) | 28 |
| Ksp22I | TGATCA | 1 cut(s) | 595 |
| Kzo9I | GATC | 3 cut(s) | 203, 209, 595 |
| LguI | GCTCTTC | 1 cut(s) | 651 |
| LmnI | GCTCC | 2 cut(s) | 84, 1059 |
| LweI | GCATC | 1 cut(s) | 796 |
| MaeI | CTAG | 3 cut(s) | 321, 440, 944 |
| MaeIII | GTNAC | 2 cut(s) | 72, 406 |
| MalI | GATC | 3 cut(s) | 205, 211, 597 |
| MboI | GATC | 3 cut(s) | 203, 209, 595 |
| MboII | GAAGA | 3 cut(s) | 638, 724, 1024 |
| MhlI | GDGCHC | 2 cut(s) | 646, 1064 |
| MluCI | AATT | 5 cut(s) | 4, 48, 251, 457, 819 |
| MlyI | GAGTC | 6 cut(s) | 54, 403, 566, 779, 883, 976 |
| MnlI | CCTC | 7 cut(s) | 178, 231, 304, 424, 564, 702, 841 |
| Mph1103I | ATGCAT | 1 cut(s) | 1054 |
| MroI | TCCGGA | 1 cut(s) | 28 |
| MseI | TTAA | 4 cut(s) | 69, 282, 477, 1081 |
| MslI | CAYNNNNRTG | 2 cut(s) | 440, 608 |
| MspI | CCGG | 3 cut(s) | 29, 492, 521 |
| MspR9I | CCNGG | 1 cut(s) | 903 |
| MvaI | CCWGG | 1 cut(s) | 903 |
| NdeI | CATATG | 2 cut(s) | 609, 917 |
| NdeII | GATC | 3 cut(s) | 203, 209, 595 |
| NlaIII | CATG | 4 cut(s) | 175, 300, 407, 1052 |
| NmeAIII | GCCGAG | 1 cut(s) | 1022 |
| NmuCI | GTSAC | 2 cut(s) | 72, 406 |
| NsiI | ATGCAT | 1 cut(s) | 1054 |
| NspI | RCATGY | 2 cut(s) | 407, 1052 |
| OliI | CACNNNNGTG | 1 cut(s) | 440 |
| PciSI | GCTCTTC | 1 cut(s) | 651 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 982 |
| PfeI | GAWTC | 3 cut(s) | 194, 551, 619 |
| PleI | GAGTC | 6 cut(s) | 54, 403, 565, 778, 882, 976 |
| PpsI | GAGTC | 6 cut(s) | 54, 403, 565, 778, 882, 976 |
| Psp6I | CCWGG | 1 cut(s) | 901 |
| PspGI | CCWGG | 1 cut(s) | 901 |
| PspPI | GGNCC | 1 cut(s) | 793 |
| RsaI | GTAC | 4 cut(s) | 146, 505, 1004, 1040 |
| RsaNI | GTAC | 4 cut(s) | 145, 504, 1003, 1039 |
| RseI | CAYNNNNRTG | 2 cut(s) | 440, 608 |
| SapI | GCTCTTC | 1 cut(s) | 651 |
| SaqAI | TTAA | 4 cut(s) | 69, 282, 477, 1081 |
| Sau3AI | GATC | 3 cut(s) | 203, 209, 595 |
| Sau96I | GGNCC | 1 cut(s) | 793 |
| SchI | GAGTC | 6 cut(s) | 54, 403, 566, 779, 883, 976 |
| ScrFI | CCNGG | 1 cut(s) | 903 |
| SduI | GDGCHC | 2 cut(s) | 646, 1064 |
| SetI | ASST | 5 cut(s) | 189, 288, 331, 758, 1022 |
| SfaNI | GCATC | 1 cut(s) | 796 |
| SinI | GGWCC | 1 cut(s) | 793 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 440, 608 |
| Sse9I | AATT | 5 cut(s) | 4, 48, 251, 457, 819 |
| SsiI | CCGC | 1 cut(s) | 741 |
| SspMI | CTAG | 3 cut(s) | 321, 440, 944 |
| StyD4I | CCNGG | 1 cut(s) | 901 |
| TaaI | ACNGT | 3 cut(s) | 94, 503, 871 |
| TaqI | TCGA | 1 cut(s) | 412 |
| TasI | AATT | 5 cut(s) | 4, 48, 251, 457, 819 |
| TatI | WGTACW | 2 cut(s) | 144, 1002 |
| TfiI | GAWTC | 3 cut(s) | 194, 551, 619 |
| Tru1I | TTAA | 4 cut(s) | 69, 282, 477, 1081 |
| Tru9I | TTAA | 4 cut(s) | 69, 282, 477, 1081 |
| TscAI | CASTG | 1 cut(s) | 876 |
| TseFI | GTSAC | 2 cut(s) | 72, 406 |
| Tsp45I | GTSAC | 2 cut(s) | 72, 406 |
| TspDTI | ATGAA | 7 cut(s) | 17, 124, 128, 165, 186, 626, 638 |
| TspRI | CASTG | 1 cut(s) | 876 |
| VpaK11BI | GGWCC | 1 cut(s) | 793 |
| XapI | RAATTY | 4 cut(s) | 4, 48, 251, 819 |
| XceI | RCATGY | 2 cut(s) | 407, 1052 |
| XspI | CTAG | 3 cut(s) | 321, 440, 944 |
| Zsp2I | ATGCAT | 1 cut(s) | 1054 |