Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0014718

Physical Location & Seq

Genomic Coordinates Reverse (-)

9088961 .. 9091839

Gene Structure 2879 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G114800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGGATGGTAGAGAAACAGGAGAGCTAAAGACGACCATCGATCAAATTAGCATGGCGAATTCCACTGTTTTTTCCGATGAGATTATTCCAGGCAGCAGCTTTGCTTCTTTTGCATCATCGGGCGGCAGCATATTTGACATGTCTGATAATAATCAGAGAGGCTCTGGGTTCATGGACTTGCTTGGATTTCAAGACTTCAACATGCCCCCTTCTTTATTCGATTTCTCCTCTTCCCAAACGACGTCCTCCTCCTCCTCCTCGATGATGATGGTGATGATGCCACCTCACCACCAACAGCAACAACAACCACCACTTGCCTCTCCGACCTCCACCCCTACTGCAGTTGCTCTGCCGGAGAGGGAGAGTACGACGTCGGAGGTGCTGAACGGTAGTACGGCTCCTACGACCCCCAACTCCTCTTCAATCTCTTCGTCGTCCAATGAAGCTGCTGCCAATAAGAATGAGGACCAGACGACGACCAAGGCTCAGGATGAGGAAGCTGATGAGCAGAACCAAGATCCCGAAAAAACCCAGAAACAACTGAAGCCCAAAAAGAAGAACCAAAAAAGGCAAAGAGAGCCGAGATTTGCGTTCATGACCAAGAGTGAGGTTGATAACCTAGATGATGGCTACCGATGGCGCAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCTTATCCCAGGAGCTATTATCGTTGCACCACTGCCGCCTGTGGTGTGAAGAAGAGGGTGGAGAGGTCTTCCGACGACCCTTCCACTGTGGTCACAACATACGAAGGCCAGCACACCCATCCAAGCCCCATTATGCCACGTGGCACCATGGGGATTGCACCGTTGCCTGACCAGCCTTCTGCCTTCTCCTCATCTCCTTTTGGTGTTCAACAGTTATTACCTCATCATCACTATCAACAACAACAACAGCAGCAGCAGCCGCAGTATTCGTATATTTATAGCTCAGCCCCTTCTTTGAATATTAGCTCACCTGCTTACGGGGGTGGTGCTTTTAACCCCTCCTCATTTTCTACGGGTTTACTTCAAGAGAGATATAATTTTGGATCACCTTCTTCTTCTTCCTCTGCGGTTTCTAATTTGCTTAGAGACCATGGACTTCTTCAGGACATCGTGCCACAGATTCGAAAGGAGGCCAAAGAAGAAGATCATCTTCATCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

391

Amino Acids

42.89

Weight (kDa)

5.82

Isoelectric Point (pI)

67.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014718)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g20230
malus_domestica	MD13G1150700.v1.1 MD16G1151000.v1.1
prunus_persica	Prupe.1G114800_v2.0.a1
pyrus_communis	pycom13g12950 pycom16g12920
rosa_chinensis	RchiOBHm_Chr4g0425801
rosa_laevigata	RLG00000007339
rosa_multiflora	Rmu_sc0007063.1_g000001
rosa_roxburghii	Rroxscaffold_5G00367790
rosa_rugosa	Rorug04G0206200 Rorug04G0206300
rosa_samantha	Rh4AG263500 Rh4BG269400 Rh4CG281800 Rh4DG265800
rosa_wichuraiana	Rw4G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	991
AatII	GACGTC	2 cut(s)	245, 374
Acc36I	ACCTGC	1 cut(s)	991
AccB1I	GGYRCC	1 cut(s)	815
AciI	CCGC	4 cut(s)	123, 708, 932, 1079
AclWI	GGATC	2 cut(s)	512, 1063
AcoI	YGGCCR	1 cut(s)	649
AcsI	RAATTY	1 cut(s)	58
AcuI	CTGAAG	2 cut(s)	563, 1097
AcvI	CACGTG	1 cut(s)	812
AcyI	GRCGYC	2 cut(s)	242, 371
AfaI	GTAC	3 cut(s)	367, 394, 647
AfiI	CCNNNNNNNGG	1 cut(s)	989
AflIII	ACRYGT	1 cut(s)	138
AgsI	TTSAA	6 cut(s)	191, 199, 423, 881, 970, 1037
AjnI	CCWGG	2 cut(s)	88, 680
AluBI	AGCT	8 cut(s)	25, 99, 446, 500, 659, 687, 954, 978
AluI	AGCT	8 cut(s)	25, 99, 446, 500, 659, 687, 954, 978
Alw26I	GTCTC	1 cut(s)	1092
AlwI	GGATC	2 cut(s)	512, 1063
AoxI	GGCC	3 cut(s)	649, 778, 1143
ApeKI	GCWGC	8 cut(s)	93, 96, 126, 446, 449, 922, 925, 928
ApoI	RAATTY	1 cut(s)	58
AspLEI	GCGC	1 cut(s)	642
AspS9I	GGNCC	1 cut(s)	466
AsuHPI	GGTGA	4 cut(s)	278, 283, 972, 1050
AsuII	TTCGAA	1 cut(s)	1135
AvaII	GGWCC	1 cut(s)	466
BanI	GGYRCC	1 cut(s)	815
BbrPI	CACGTG	1 cut(s)	812
BbsI	GAAGAC	1 cut(s)	732
BbvI	GCAGC	8 cut(s)	105, 108, 138, 433, 436, 934, 937, 940
BccI	CCATC	5 cut(s)	44, 262, 620, 630, 798
BceAI	ACGGC	2 cut(s)	411, 664
BciT130I	CCWGG	2 cut(s)	90, 682
BcoDI	GTCTC	1 cut(s)	1092
BfaI	CTAG	1 cut(s)	620
BfmI	CTRYAG	1 cut(s)	339
BfuAI	ACCTGC	1 cut(s)	991
BlpI	GCTNAGC	1 cut(s)	955
Bme1390I	CCNGG	2 cut(s)	90, 682
Bme18I	GGWCC	1 cut(s)	466
BmgT120I	GGNCC	1 cut(s)	466
BmiI	GGNNCC	2 cut(s)	399, 817
BmrFI	CCNGG	2 cut(s)	90, 682
BmsI	GCATC	2 cut(s)	122, 267
BpiI	GAAGAC	1 cut(s)	732
Bpu10I	CCTNAGC	1 cut(s)	486
Bpu1102I	GCTNAGC	1 cut(s)	955
Bpu14I	TTCGAA	1 cut(s)	1135
Bsa29I	ATCGAT	1 cut(s)	39
BsaAI	YACGTR	1 cut(s)	812
BsaBI	GATNNNNATC	1 cut(s)	150
BsaHI	GRCGYC	2 cut(s)	242, 371
BsaI	GGTCTC	1 cut(s)	1092
BsaJI	CCNNGG	4 cut(s)	480, 680, 819, 1102
Bsc4I	CCNNNNNNNGG	1 cut(s)	989
Bse8I	GATNNNNATC	1 cut(s)	150
BseBI	CCWGG	2 cut(s)	90, 682
BseCI	ATCGAT	1 cut(s)	39
BseDI	CCNNGG	4 cut(s)	480, 680, 819, 1102
BseGI	GGATG	3 cut(s)	10, 496, 790
BseJI	GATNNNNATC	1 cut(s)	150
BseLI	CCNNNNNNNGG	1 cut(s)	989
BseMII	CTCAG	2 cut(s)	500, 969
BseRI	GAGGAG	8 cut(s)	217, 238, 241, 244, 247, 406, 850, 1003
BseXI	GCAGC	8 cut(s)	105, 108, 138, 433, 436, 934, 937, 940
BshFI	GGCC	3 cut(s)	651, 780, 1145
BshNI	GGYRCC	1 cut(s)	815
BshVI	ATCGAT	1 cut(s)	39
BsiSI	CCGG	1 cut(s)	353
BslI	CCNNNNNNNGG	1 cut(s)	989
BsmAI	GTCTC	1 cut(s)	1092
BsnI	GGCC	3 cut(s)	651, 780, 1145
Bso31I	GGTCTC	1 cut(s)	1092
Bsp119I	TTCGAA	1 cut(s)	1135
Bsp143I	GATC	4 cut(s)	40, 517, 1055, 1156
Bsp1720I	GCTNAGC	1 cut(s)	955
Bsp19I	CCATGG	2 cut(s)	819, 1102
BspACI	CCGC	4 cut(s)	123, 708, 932, 1079
BspANI	GGCC	3 cut(s)	651, 780, 1145
BspCNI	CTCAG	2 cut(s)	499, 968
BspDI	ATCGAT	1 cut(s)	39
BspHI	TCATGA	1 cut(s)	594
BspLI	GGNNCC	2 cut(s)	399, 817
BspMAI	CTGCAG	1 cut(s)	343
BspMI	ACCTGC	1 cut(s)	991
BspPI	GGATC	2 cut(s)	512, 1063
BspT104I	TTCGAA	1 cut(s)	1135
BspT107I	GGYRCC	1 cut(s)	815
BspTNI	GGTCTC	1 cut(s)	1092
BssECI	CCNNGG	4 cut(s)	480, 680, 819, 1102
BssMI	GATC	4 cut(s)	40, 517, 1055, 1156
BssNI	GRCGYC	2 cut(s)	242, 371
BssT1I	CCWWGG	3 cut(s)	480, 819, 1102
Bst2UI	CCWGG	2 cut(s)	90, 682
Bst4CI	ACNGT	5 cut(s)	67, 389, 760, 834, 885
Bst6I	CTCTTC	4 cut(s)	235, 424, 433, 719
BstACI	GRCGYC	2 cut(s)	242, 371
BstBAI	YACGTR	1 cut(s)	812
BstBI	TTCGAA	1 cut(s)	1135
BstC8I	GCNNGC	1 cut(s)	782
BstDEI	CTNAG	3 cut(s)	486, 955, 1094
BstDSI	CCRYGG	2 cut(s)	819, 1102
BstF5I	GGATG	3 cut(s)	10, 496, 790
BstHHI	GCGC	1 cut(s)	642
BstKTI	GATC	4 cut(s)	43, 520, 1058, 1159
BstMAI	GTCTC	1 cut(s)	1092
BstMBI	GATC	4 cut(s)	40, 517, 1055, 1156
BstMWI	GCNNNNNNNGC	6 cut(s)	110, 577, 648, 844, 928, 931
BstNI	CCWGG	2 cut(s)	90, 682
BstNSI	RCATGY	2 cut(s)	142, 205
BstSCI	CCNGG	2 cut(s)	88, 680
BstSFI	CTRYAG	1 cut(s)	339
BstV1I	GCAGC	8 cut(s)	105, 108, 138, 433, 436, 934, 937, 940
BstV2I	GAAGAC	1 cut(s)	732
BstX2I	RGATCY	1 cut(s)	517
BstYI	RGATCY	1 cut(s)	517
Bsu15I	ATCGAT	1 cut(s)	39
BsuRI	GGCC	3 cut(s)	651, 780, 1145
BsuTUI	ATCGAT	1 cut(s)	39
BtgI	CCRYGG	2 cut(s)	819, 1102
BtsCI	GGATG	3 cut(s)	10, 496, 790
BtsI	GCAGTG	1 cut(s)	702
BtsIMutI	CAGTG	3 cut(s)	63, 702, 756
BveI	ACCTGC	1 cut(s)	991
Cac8I	GCNNGC	1 cut(s)	782
CciI	TCATGA	1 cut(s)	594
CfoI	GCGC	1 cut(s)	642
Cfr13I	GGNCC	1 cut(s)	466
ClaI	ATCGAT	1 cut(s)	39
Csp6I	GTAC	3 cut(s)	366, 393, 646
CviAII	CATG	7 cut(s)	52, 139, 172, 202, 595, 820, 1103
CviQI	GTAC	3 cut(s)	366, 393, 646
DdeI	CTNAG	3 cut(s)	486, 955, 1094
DpnI	GATC	4 cut(s)	42, 519, 1057, 1158
DpnII	GATC	4 cut(s)	40, 517, 1055, 1156
EaeI	YGGCCR	1 cut(s)	649
Eam1104I	CTCTTC	4 cut(s)	235, 424, 433, 719
EarI	CTCTTC	4 cut(s)	235, 424, 433, 719
Eco130I	CCWWGG	3 cut(s)	480, 819, 1102
Eco31I	GGTCTC	1 cut(s)	1092
Eco47I	GGWCC	1 cut(s)	466
Eco57I	CTGAAG	2 cut(s)	563, 1097
Eco72I	CACGTG	1 cut(s)	812
EcoRI	GAATTC	1 cut(s)	58
EcoRII	CCWGG	2 cut(s)	88, 680
EcoT14I	CCWWGG	3 cut(s)	480, 819, 1102
ErhI	CCWWGG	3 cut(s)	480, 819, 1102
FaeI	CATG	7 cut(s)	55, 142, 175, 205, 598, 823, 1106
FalI	AAGNNNNNCTT	1 cut(s)	1146
FatI	CATG	7 cut(s)	51, 138, 171, 201, 594, 819, 1102
FokI	GGATG	3 cut(s)	17, 503, 777
FspBI	CTAG	1 cut(s)	620
GlaI	GCGC	1 cut(s)	641
HaeIII	GGCC	3 cut(s)	651, 780, 1145
HapII	CCGG	1 cut(s)	353
HhaI	GCGC	1 cut(s)	642
Hin1I	GRCGYC	2 cut(s)	242, 371
Hin1II	CATG	7 cut(s)	55, 142, 175, 205, 598, 823, 1106
Hin6I	GCGC	1 cut(s)	640
HinP1I	GCGC	1 cut(s)	640
HinfI	GANTC	1 cut(s)	1132
HpaII	CCGG	1 cut(s)	353
HphI	GGTGA	4 cut(s)	278, 283, 972, 1050
Hpy166II	GTNNAC	1 cut(s)	1031
Hpy188I	TCNGA	6 cut(s)	76, 145, 156, 324, 376, 745
Hpy188III	TCNNGA	6 cut(s)	191, 488, 521, 595, 1037, 1115
Hpy8I	GTNNAC	1 cut(s)	1031
Hpy99I	CGWCG	6 cut(s)	244, 373, 376, 436, 478, 749
HpyAV	CCTTC	7 cut(s)	219, 762, 770, 858, 865, 972, 1071
HpyCH4III	ACNGT	5 cut(s)	67, 389, 760, 834, 885
HpyCH4IV	ACGT	3 cut(s)	242, 371, 811
HpyCH4V	TGCA	4 cut(s)	113, 341, 699, 830
HpyF10VI	GCNNNNNNNGC	6 cut(s)	110, 577, 648, 844, 928, 931
HpyF3I	CTNAG	3 cut(s)	486, 955, 1094
HpySE526I	ACGT	3 cut(s)	242, 371, 811
Hsp92I	GRCGYC	2 cut(s)	242, 371
Hsp92II	CATG	7 cut(s)	55, 142, 175, 205, 598, 823, 1106
HspAI	GCGC	1 cut(s)	640
Kzo9I	GATC	4 cut(s)	40, 517, 1055, 1156
LmnI	GCTCC	2 cut(s)	403, 684
Lsp1109I	GCAGC	8 cut(s)	105, 108, 138, 433, 436, 934, 937, 940
LweI	GCATC	2 cut(s)	122, 267
MaeI	CTAG	1 cut(s)	620
MaeII	ACGT	3 cut(s)	242, 371, 811
MaeIII	GTNAC	1 cut(s)	763
MalI	GATC	4 cut(s)	42, 519, 1057, 1158
MboI	GATC	4 cut(s)	40, 517, 1055, 1156
MflI	RGATCY	1 cut(s)	517
MluCI	AATT	4 cut(s)	45, 58, 1048, 1087
MmeI	TCCRAC	3 cut(s)	347, 354, 768
MseI	TTAA	1 cut(s)	1005
MspI	CCGG	1 cut(s)	353
MspR9I	CCNGG	2 cut(s)	90, 682
MvaI	CCWGG	2 cut(s)	90, 682
MwoI	GCNNNNNNNGC	6 cut(s)	110, 577, 648, 844, 928, 931
NcoI	CCATGG	2 cut(s)	819, 1102
NdeII	GATC	4 cut(s)	40, 517, 1055, 1156
NlaIII	CATG	7 cut(s)	55, 142, 175, 205, 598, 823, 1106
NlaIV	GGNNCC	2 cut(s)	399, 817
NmeAIII	GCCGAG	1 cut(s)	606
NmuCI	GTSAC	1 cut(s)	763
NspI	RCATGY	2 cut(s)	142, 205
NspV	TTCGAA	1 cut(s)	1135
PagI	TCATGA	1 cut(s)	594
PaqCI	CACCTGC	1 cut(s)	991
PciI	ACATGT	1 cut(s)	138
PcsI	WCGNNNNNNNCGW	1 cut(s)	401
PfeI	GAWTC	1 cut(s)	1132
PmaCI	CACGTG	1 cut(s)	812
PmlI	CACGTG	1 cut(s)	812
Ppu21I	YACGTR	1 cut(s)	812
PscI	ACATGT	1 cut(s)	138
Psp6I	CCWGG	2 cut(s)	88, 680
PspCI	CACGTG	1 cut(s)	812
PspGI	CCWGG	2 cut(s)	88, 680
PspN4I	GGNNCC	2 cut(s)	399, 817
PspPI	GGNCC	1 cut(s)	466
PstI	CTGCAG	1 cut(s)	343
PsuI	RGATCY	1 cut(s)	517
RsaI	GTAC	3 cut(s)	367, 394, 647
RsaNI	GTAC	3 cut(s)	366, 393, 646
SaqAI	TTAA	1 cut(s)	1005
Sau3AI	GATC	4 cut(s)	40, 517, 1055, 1156
Sau96I	GGNCC	1 cut(s)	466
ScrFI	CCNGG	2 cut(s)	90, 682
SfaNI	GCATC	2 cut(s)	122, 267
SfcI	CTRYAG	1 cut(s)	339
SfuI	TTCGAA	1 cut(s)	1135
SinI	GGWCC	1 cut(s)	466
Sse9I	AATT	4 cut(s)	45, 58, 1048, 1087
SsiI	CCGC	4 cut(s)	123, 708, 932, 1079
SspI	AATATT	1 cut(s)	973
SspMI	CTAG	1 cut(s)	620
StyD4I	CCNGG	2 cut(s)	88, 680
StyI	CCWWGG	3 cut(s)	480, 819, 1102
TaaI	ACNGT	5 cut(s)	67, 389, 760, 834, 885
TaiI	ACGT	3 cut(s)	245, 374, 814
TaqI	TCGA	4 cut(s)	39, 219, 260, 1135
TasI	AATT	4 cut(s)	45, 58, 1048, 1087
TauI	GCSGC	3 cut(s)	126, 710, 934
TfiI	GAWTC	1 cut(s)	1132
Tru1I	TTAA	1 cut(s)	1005
Tru9I	TTAA	1 cut(s)	1005
TscAI	CASTG	3 cut(s)	70, 709, 763
TseFI	GTSAC	1 cut(s)	763
TseI	GCWGC	8 cut(s)	93, 96, 126, 446, 449, 922, 925, 928
Tsp45I	GTSAC	1 cut(s)	763
TspDTI	ATGAA	4 cut(s)	160, 456, 583, 1154
TspRI	CASTG	3 cut(s)	70, 709, 763
VpaK11BI	GGWCC	1 cut(s)	466
XapI	RAATTY	1 cut(s)	58
XceI	RCATGY	2 cut(s)	142, 205
XspI	CTAG	1 cut(s)	620
ZraI	GACGTC	2 cut(s)	243, 372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.