Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0014718

Physical Location & Seq

Genomic Coordinates Reverse (-)

35870761 .. 35878848

Gene Structure 8088 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0206200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGGCCAAGGAGGAGCAGCTATCGGAGCTTCTGGAAACCCTAGGCGACTTCACAAGCAAAGAGAACTGGGACAAGTTCTTCACCATCCGAGGCACCGAAGACGCCTTCGAGTGGTACGCCGAGTGGTCCGAGCTCCGAGACCCTTTGCTCTCCCACCTCCCGCCAAAACCCCAAATCCTCGTCCCCGGCTGCGGCAGCTCCCGCCTCTCCGAGCACCTCTACGACGCCGGCTTCACCTCCATCACCAACATCGACTTCTCCAAGGTCGCCATTTCCGATTGCCTCCGCCGCAATGTGCGCCTCAGGCCCCTTATGCGGTGGCGCGTCATGGACATGACCGCCATGCAGCTTGAGGATGAGGCATTTGATGCTGTGGTTGACAAAGGTGGATTGGATGCTTTGATGGAGCCGGAGCTTGGCCCTAAGTTAGGGGATCAATATTTAGCAGAGGTTAGAAGAGTTTTGAAGTCTGGAGGGAAATTTATTTGCCTTACATTGGCGGAGTCGCATGTTCTGGCTCTGCTTTTCCCGAAGTTCCGGTTTGGGTGGAAAATTAGTGTCGATGCAATACCCCACAAACCGTCTAGTAAGCCAAGTCTTCAAGCATTTATGGTGGTTGCTGTAAAAGAGATGTCCACTGAGTTGCAGGAGATCACATCCTCATTCAATAAGTCTTCCCTTGCTTGTAGAGGAAGTCAGGGTCGTGGACTTCTTGAAGCTGTTGAAAATGAGAATCAAATTCGTAGAGAATACTCCTCTGCTTCAGATATACAGCACTCTCTTGAAGACTTAAAACTTGGAGCTAGAGGAGATTTAACTAAGCTTCGCCCCGGTCGTCGTTTTCAGCTTACTTTGTGTGGGGGCTCCCACTTCAGTTGCAGAGCTGTAGTTCTTGATGCTAAGGAAAACTCTGGCCCCTTTGTATATCACTGTGGGGTTTTTATTGTGCCTAAGACTCGGGCTCATGAATGGCTGTTCTCTTCTGAAGAAGGACAATGGATGGTAGTAGAAAGCTCAAAGGCAGCTCGTCTAGTAATGGTTTTATTAGATGCCAGCCATGTTAGTGTGAGCATGGATGATATTCAGAAGGAATTATCTCCTTTGGTTAAACAATTGGCGCCTGGAAAAGATGACAATGGAGCTCAAATTCCATTCATGATGGCAAGTGATGGGATCAAACAACGAGATATTGTGCACCAGGTCACATCCTCAATAACTGGACCAATAATAGTTGAGGATGTGATTTATGAAACTGATAATGGTGATATCAGTCGCATTCTACCATCCAGAGATTTGACATTTCGTCGCCTTGTCTTCCAAAGAAGTGAGGGTCTGGTTCAGTCTGAAGCTCTTCTGTCAGAGGAAGGATCGAAATATAAAATTATTGGTCAGAGTGAGAAGAAAAAAACAAATTCATCTTCCAAATCTAAAAAAAGAGGAATCCAGAGACGAAGTGATGAGACGAGCCACCAGCTGAAGGTGTATCATGGGTATTTGGCTAGTTCTTATCATACAGGGATTATTTCTGGATTAATGTTGATTTCATCATATTTGGAAAGCATGGTGTCAACACAAAAATCAGTCAAAACAGTTGTTATTGGTCTTGGAGCAGGTTTACTTCCTATGTTCCTTCATAAATGTATGCCCTTTATGCACATTGAGGCGGTGGAGTTGGATCCCATAGTCATCAAACTTGCAAAAGAATACTTTGGTTTCATCGAAGATGATCACTTGCAGGTGCACATTGCTGATGGGATTCAGTATCTCAGAAAAGCTGTACATTTTGCTGCGGAGGATGAAAAGTCTGCTGTTCGAGGAAATGAGAATGGTCACTGCAATTCTGACCCCCCATCTTCTAATGGAAGCCATTTGGCATTTCATGTAGAAGGCCAGGGAATTTCGAAGGTAGACATAGTCATTATTGATGTGGATTCTGCCGACTCAAGTTCTGGAATGACCTGCCCTGCAGCTGATTTTGTGGACGAGTCGTTTCTTCGGACTGTGAAGGATGCCCTTACTGAGAAGGGTCTATTTATTATAAATTTGGTTTCACGGTCCCAAGACATTAAAGACACTGTTATTTCAAGGATGAAAATGGTGTTTAGCCATCTCTTCTGCCTTCAGCTTGAAGATGTCAATGAAGTTATTTTTGCCCTTCCTTCAGCTTCCTGTATCAAGGAGGATGGCTTCGCCAAAGCCACTCTTCAACTTGAGAAATTGTTAAAATTGGAGCACCCGGAGATAAGCCAAAGCATTATAGATGCTACAAAGAAGATAAGACATCTGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0007017 GO:0007021 GO:0008092 GO:0008150 GO:0009987 GO:0015631 GO:0016043 GO:0016272 GO:0022607 GO:0032991 GO:0034622 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0065003 GO:0071840 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Prefoldin

Protein Analysis

763

Amino Acids

85.02

Weight (kDa)

6.04

Isoelectric Point (pI)

45.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_25	PF13649	59 - 159	3.4e-11	Methyltransferase domain
Methyltransf_31	PF13847	60 - 167	9.6e-08	Methyltransferase domain
Methyltransf_11	PF08241	62 - 163	2.6e-13	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014718)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g20230
malus_domestica	MD13G1150700.v1.1 MD16G1151000.v1.1
prunus_persica	Prupe.1G114800_v2.0.a1
pyrus_communis	pycom13g12950 pycom16g12920
rosa_chinensis	RchiOBHm_Chr4g0425801
rosa_laevigata	RLG00000007339
rosa_multiflora	Rmu_sc0007063.1_g000001
rosa_roxburghii	Rroxscaffold_5G00367790
rosa_rugosa	Rorug04G0206200 Rorug04G0206300
rosa_samantha	Rh4AG263500 Rh4BG269400 Rh4CG281800 Rh4DG265800
rosa_wichuraiana	Rw4G022740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2039
AarI	CACCTGC	1 cut(s)	1726
Acc36I	ACCTGC	3 cut(s)	1601, 1726, 1967
AccB1I	GGYRCC	2 cut(s)	92, 1117
AccI	GTMKAC	1 cut(s)	1908
AccII	CGCG	1 cut(s)	324
AclWI	GGATC	5 cut(s)	441, 1181, 1375, 1670, 1683
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	6 cut(s)	479, 738, 1146, 1411, 1896, 2041
AcuI	CTGAAG	7 cut(s)	747, 856, 1005, 1365, 1496, 2105, 2145
AcyI	GRCGYC	3 cut(s)	102, 225, 1118
AfaI	GTAC	2 cut(s)	116, 1779
AfiI	CCNNNNNNNGG	7 cut(s)	111, 191, 315, 416, 428, 496, 1477
AgsI	TTSAA	9 cut(s)	466, 602, 667, 716, 725, 785, 2085, 2129, 2207
AhdI	GACNNNNNGTC	1 cut(s)	1302
AjnI	CCWGG	3 cut(s)	1120, 1197, 1890
AjuI	GAANNNNNNNTTGG	2 cut(s)	239, 271
Alw21I	GWGCWC	6 cut(s)	135, 216, 1144, 1197, 1743, 2235
Alw26I	GTCTC	3 cut(s)	132, 1441, 1454
Alw44I	GTGCAC	2 cut(s)	1193, 1739
AlwI	GGATC	5 cut(s)	441, 1181, 1375, 1670, 1683
Ama87I	CYCGRG	1 cut(s)	957
AoxI	GGCC	5 cut(s)	3, 305, 418, 913, 1888
ApaLI	GTGCAC	2 cut(s)	1193, 1739
ApeKI	GCWGC	7 cut(s)	16, 189, 195, 346, 1022, 1787, 1967
ApoI	RAATTY	6 cut(s)	479, 738, 1146, 1411, 1896, 2041
AseI	ATTAAT	1 cut(s)	1532
Asp700I	GAANNNNTTC	1 cut(s)	1350
AspA2I	CCTAGG	1 cut(s)	40
AspLEI	GCGC	3 cut(s)	300, 324, 1120
AspS9I	GGNCC	6 cut(s)	126, 306, 419, 914, 1220, 2055
AsuC2I	CCSGG	3 cut(s)	186, 831, 2237
AsuHPI	GGTGA	4 cut(s)	73, 226, 235, 1274
AsuII	TTCGAA	1 cut(s)	1901
AvaI	CYCGRG	1 cut(s)	957
AvaII	GGWCC	3 cut(s)	126, 1220, 2055
AvrII	CCTAGG	1 cut(s)	40
AxyI	CCTNAGG	1 cut(s)	302
BaeGI	GKGCMC	2 cut(s)	1197, 1743
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	1675
BanI	GGYRCC	2 cut(s)	92, 1117
BanII	GRGCYC	4 cut(s)	135, 866, 964, 1144
BbsI	GAAGAC	5 cut(s)	105, 590, 666, 792, 1306
Bbv12I	GWGCWC	6 cut(s)	135, 216, 1144, 1197, 1743, 2235
BbvI	GCAGC	7 cut(s)	28, 176, 207, 358, 1034, 1774, 1979
BciT130I	CCWGG	3 cut(s)	1122, 1199, 1892
BclI	TGATCA	1 cut(s)	1726
BcnI	CCSGG	3 cut(s)	186, 831, 2237
BcoDI	GTCTC	3 cut(s)	132, 1441, 1454
BfaI	CTAG	5 cut(s)	41, 585, 804, 1031, 1500
BfmI	CTRYAG	2 cut(s)	885, 1965
BfoI	RGCGCY	1 cut(s)	1121
BfuAI	ACCTGC	3 cut(s)	1601, 1726, 1967
BisI	GCNGC	9 cut(s)	17, 190, 193, 196, 289, 347, 1023, 1788, 1968
BlnI	CCTAGG	1 cut(s)	40
BlsI	GCNGC	9 cut(s)	18, 191, 194, 197, 290, 348, 1024, 1789, 1969
Bme1390I	CCNGG	6 cut(s)	186, 831, 1122, 1199, 1892, 2237
Bme18I	GGWCC	3 cut(s)	126, 1220, 2055
BmeRI	GACNNNNNGTC	1 cut(s)	1302
BmeT110I	CYCGRG	1 cut(s)	957
BmgT120I	GGNCC	6 cut(s)	126, 306, 419, 914, 1220, 2055
BmiI	GGNNCC	8 cut(s)	94, 308, 408, 865, 916, 1119, 1677, 2057
BmrFI	CCNGG	6 cut(s)	186, 831, 1122, 1199, 1892, 2237
BmrI	ACTGGG	1 cut(s)	76
BmsI	GCATC	7 cut(s)	358, 385, 553, 886, 1039, 1999, 2251
BmuI	ACTGGG	1 cut(s)	76
BpiI	GAAGAC	5 cut(s)	105, 590, 666, 792, 1306
BpmI	CTGGAG	1 cut(s)	492
Bpu10I	CCTNAGC	1 cut(s)	900
Bpu14I	TTCGAA	1 cut(s)	1901
BpuEI	CTTGAG	3 cut(s)	371, 1927, 2231
BpuMI	CCSGG	3 cut(s)	186, 831, 2237
BsaHI	GRCGYC	3 cut(s)	102, 225, 1118
BsaI	GGTCTC	1 cut(s)	132
BsaJI	CCNNGG	7 cut(s)	6, 40, 88, 184, 261, 829, 1891
BsaWI	WCCGGW	1 cut(s)	537
Bsc4I	CCNNNNNNNGG	7 cut(s)	111, 191, 315, 416, 428, 496, 1477
Bse118I	RCCGGY	1 cut(s)	227
Bse1I	ACTGG	2 cut(s)	71, 1222
Bse21I	CCTNAGG	1 cut(s)	302
Bse3DI	GCAATG	2 cut(s)	298, 1743
BseBI	CCWGG	3 cut(s)	1122, 1199, 1892
BseDI	CCNNGG	7 cut(s)	6, 40, 88, 184, 261, 829, 1891
BseLI	CCNNNNNNNGG	7 cut(s)	111, 191, 315, 416, 428, 496, 1477
BseMI	GCAATG	2 cut(s)	298, 1743
BseMII	CTCAG	4 cut(s)	316, 630, 1780, 2010
BseNI	ACTGG	2 cut(s)	71, 1222
BseRI	GAGGAG	3 cut(s)	26, 745, 822
BseSI	GKGCMC	2 cut(s)	1197, 1743
BseXI	GCAGC	7 cut(s)	28, 176, 207, 358, 1034, 1774, 1979
Bsh1236I	CGCG	1 cut(s)	324
Bsh1285I	CGRYCG	1 cut(s)	835
BshFI	GGCC	5 cut(s)	5, 307, 420, 915, 1890
BshNI	GGYRCC	2 cut(s)	92, 1117
BsiEI	CGRYCG	1 cut(s)	835
BsiHKAI	GWGCWC	6 cut(s)	135, 216, 1144, 1197, 1743, 2235
BsiHKCI	CYCGRG	1 cut(s)	957
BsiSI	CCGG	6 cut(s)	186, 228, 410, 538, 831, 2237
BslFI	GGGAC	3 cut(s)	83, 167, 2041
BslI	CCNNNNNNNGG	7 cut(s)	111, 191, 315, 416, 428, 496, 1477
BsmAI	GTCTC	3 cut(s)	132, 1441, 1454
BsmBI	CGTCTC	2 cut(s)	1441, 1454
BsmFI	GGGAC	3 cut(s)	83, 167, 2041
BsmI	GAATGC	1 cut(s)	1275
BsnI	GGCC	5 cut(s)	5, 307, 420, 915, 1890
Bso31I	GGTCTC	1 cut(s)	132
BsoBI	CYCGRG	1 cut(s)	957
Bsp119I	TTCGAA	1 cut(s)	1901
Bsp1286I	GDGCHC	8 cut(s)	135, 216, 866, 964, 1144, 1197, 1743, 2235
Bsp1407I	TGTACA	1 cut(s)	1777
Bsp143I	GATC	6 cut(s)	433, 651, 1173, 1367, 1675, 1726
BspANI	GGCC	5 cut(s)	5, 307, 420, 915, 1890
BspCNI	CTCAG	4 cut(s)	315, 631, 1779, 2011
BspFNI	CGCG	1 cut(s)	324
BspHI	TCATGA	2 cut(s)	964, 1155
BspLI	GGNNCC	8 cut(s)	94, 308, 408, 865, 916, 1119, 1677, 2057
BspMAI	CTGCAG	1 cut(s)	1969
BspMI	ACCTGC	3 cut(s)	1601, 1726, 1967
BspPI	GGATC	5 cut(s)	441, 1181, 1375, 1670, 1683
BspQI	GCTCTTC	1 cut(s)	1356
BspT104I	TTCGAA	1 cut(s)	1901
BspT107I	GGYRCC	2 cut(s)	92, 1117
BspTNI	GGTCTC	1 cut(s)	132
BsrDI	GCAATG	2 cut(s)	298, 1743
BsrFI	RCCGGY	1 cut(s)	227
BsrGI	TGTACA	1 cut(s)	1777
BsrI	ACTGG	2 cut(s)	71, 1222
BssAI	RCCGGY	1 cut(s)	227
BssECI	CCNNGG	7 cut(s)	6, 40, 88, 184, 261, 829, 1891
BssMI	GATC	6 cut(s)	433, 651, 1173, 1367, 1675, 1726
BssNI	GRCGYC	3 cut(s)	102, 225, 1118
BssT1I	CCWWGG	3 cut(s)	6, 40, 261
Bst2UI	CCWGG	3 cut(s)	1122, 1199, 1892
Bst4CI	ACNGT	6 cut(s)	582, 932, 1591, 2002, 2055, 2077
Bst6I	CTCTTC	5 cut(s)	451, 985, 1356, 2117, 2208
BstACI	GRCGYC	3 cut(s)	102, 225, 1118
BstAPI	GCANNNNNTGC	1 cut(s)	368
BstAUI	TGTACA	1 cut(s)	1777
BstBI	TTCGAA	1 cut(s)	1901
BstC8I	GCNNGC	2 cut(s)	229, 1054
BstDEI	CTNAG	8 cut(s)	302, 423, 639, 819, 900, 951, 1766, 2019
BstENI	CCTNNNNNAGG	1 cut(s)	426
BstFNI	CGCG	1 cut(s)	324
BstH2I	RGCGCY	1 cut(s)	1121
BstHHI	GCGC	3 cut(s)	300, 324, 1120
BstKTI	GATC	6 cut(s)	436, 654, 1176, 1370, 1678, 1729
BstMAI	GTCTC	3 cut(s)	132, 1441, 1454
BstMBI	GATC	6 cut(s)	433, 651, 1173, 1367, 1675, 1726
BstMCI	CGRYCG	1 cut(s)	835
BstMWI	GCNNNNNNNGC	9 cut(s)	25, 195, 201, 288, 297, 304, 313, 368, 1651
BstNI	CCWGG	3 cut(s)	1122, 1199, 1892
BstNSI	RCATGY	1 cut(s)	512
BstSCI	CCNGG	6 cut(s)	184, 829, 1120, 1197, 1890, 2235
BstSFI	CTRYAG	2 cut(s)	885, 1965
BstSLI	GKGCMC	2 cut(s)	1197, 1743
BstUI	CGCG	1 cut(s)	324
BstV1I	GCAGC	7 cut(s)	28, 176, 207, 358, 1034, 1774, 1979
BstV2I	GAAGAC	5 cut(s)	105, 590, 666, 792, 1306
BstX2I	RGATCY	1 cut(s)	1675
BstYI	RGATCY	1 cut(s)	1675
Bsu36I	CCTNAGG	1 cut(s)	302
BsuRI	GGCC	5 cut(s)	5, 307, 420, 915, 1890
BtsI	GCAGTG	1 cut(s)	1831
BtsIMutI	CAGTG	4 cut(s)	636, 928, 1831, 2073
BveI	ACCTGC	3 cut(s)	1601, 1726, 1967
Cac8I	GCNNGC	2 cut(s)	229, 1054
CciI	TCATGA	2 cut(s)	964, 1155
CfoI	GCGC	3 cut(s)	300, 324, 1120
Cfr10I	RCCGGY	1 cut(s)	227
Cfr13I	GGNCC	6 cut(s)	126, 306, 419, 914, 1220, 2055
CseI	GACGC	3 cut(s)	110, 233, 313
CsiI	ACCWGGT	1 cut(s)	1197
Csp6I	GTAC	2 cut(s)	115, 1778
CspCI	CAANNNNNGTGG	2 cut(s)	857, 892
CviQI	GTAC	2 cut(s)	115, 1778
DdeI	CTNAG	8 cut(s)	302, 423, 639, 819, 900, 951, 1766, 2019
DinI	GGCGCC	1 cut(s)	1119
DpnI	GATC	6 cut(s)	435, 653, 1175, 1369, 1677, 1728
DpnII	GATC	6 cut(s)	433, 651, 1173, 1367, 1675, 1726
DriI	GACNNNNNGTC	1 cut(s)	1302
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	5 cut(s)	451, 985, 1356, 2117, 2208
Eam1105I	GACNNNNNGTC	1 cut(s)	1302
EarI	CTCTTC	5 cut(s)	451, 985, 1356, 2117, 2208
EciI	GGCGGA	2 cut(s)	275, 515
Ecl136II	GAGCTC	2 cut(s)	133, 1142
Eco130I	CCWWGG	3 cut(s)	6, 40, 261
Eco24I	GRGCYC	4 cut(s)	135, 866, 964, 1144
Eco31I	GGTCTC	1 cut(s)	132
Eco32I	GATATC	1 cut(s)	1267
Eco47I	GGWCC	3 cut(s)	126, 1220, 2055
Eco53kI	GAGCTC	2 cut(s)	133, 1142
Eco57I	CTGAAG	7 cut(s)	747, 856, 1005, 1365, 1496, 2105, 2145
Eco81I	CCTNAGG	1 cut(s)	302
Eco88I	CYCGRG	1 cut(s)	957
EcoICRI	GAGCTC	2 cut(s)	133, 1142
EcoNI	CCTNNNNNAGG	1 cut(s)	426
EcoO109I	RGGNCCY	1 cut(s)	306
EcoRII	CCWGG	3 cut(s)	1120, 1197, 1890
EcoRV	GATATC	1 cut(s)	1267
EcoT14I	CCWWGG	3 cut(s)	6, 40, 261
EcoT38I	GRGCYC	4 cut(s)	135, 866, 964, 1144
EgeI	GGCGCC	1 cut(s)	1119
EheI	GGCGCC	1 cut(s)	1119
ErhI	CCWWGG	3 cut(s)	6, 40, 261
Esp3I	CGTCTC	2 cut(s)	1441, 1454
FalI	AAGNNNNNCTT	2 cut(s)	2187, 2219
FaqI	GGGAC	3 cut(s)	83, 167, 2041
FauI	CCCGC	2 cut(s)	168, 209
FbaI	TGATCA	1 cut(s)	1726
FblI	GTMKAC	1 cut(s)	1908
Fnu4HI	GCNGC	9 cut(s)	17, 190, 193, 196, 289, 347, 1023, 1788, 1968
FriOI	GRGCYC	4 cut(s)	135, 866, 964, 1144
Fsp4HI	GCNGC	9 cut(s)	17, 190, 193, 196, 289, 347, 1023, 1788, 1968
FspBI	CTAG	5 cut(s)	41, 585, 804, 1031, 1500
GlaI	GCGC	3 cut(s)	299, 323, 1119
GluI	GCNGC	9 cut(s)	17, 190, 193, 196, 289, 347, 1023, 1788, 1968
GsuI	CTGGAG	1 cut(s)	492
HaeII	RGCGCY	1 cut(s)	1121
HaeIII	GGCC	5 cut(s)	5, 307, 420, 915, 1890
HapII	CCGG	6 cut(s)	186, 228, 410, 538, 831, 2237
HgaI	GACGC	3 cut(s)	110, 233, 313
HhaI	GCGC	3 cut(s)	300, 324, 1120
Hin1I	GRCGYC	3 cut(s)	102, 225, 1118
Hin6I	GCGC	3 cut(s)	298, 322, 1118
HinP1I	GCGC	3 cut(s)	298, 322, 1118
HincII	GTYRAC	2 cut(s)	379, 1569
HindII	GTYRAC	2 cut(s)	379, 1569
HindIII	AAGCTT	1 cut(s)	821
HinfI	GANTC	8 cut(s)	503, 733, 955, 1440, 1756, 1931, 1940, 1985
HpaII	CCGG	6 cut(s)	186, 228, 410, 538, 831, 2237
HphI	GGTGA	4 cut(s)	73, 226, 235, 1274
Hpy166II	GTNNAC	9 cut(s)	379, 636, 707, 1195, 1569, 1616, 1741, 1909, 1981
Hpy8I	GTNNAC	9 cut(s)	379, 636, 707, 1195, 1569, 1616, 1741, 1909, 1981
Hpy99I	CGWCG	3 cut(s)	227, 840, 1308
HpyCH4III	ACNGT	6 cut(s)	582, 932, 1591, 2002, 2055, 2077
HpyF10VI	GCNNNNNNNGC	9 cut(s)	25, 195, 201, 288, 297, 304, 313, 368, 1651
HpyF3I	CTNAG	8 cut(s)	302, 423, 639, 819, 900, 951, 1766, 2019
Hsp92I	GRCGYC	3 cut(s)	102, 225, 1118
HspAI	GCGC	3 cut(s)	298, 322, 1118
KasI	GGCGCC	1 cut(s)	1117
KroI	GCCGGC	1 cut(s)	227
KroNI	GCCGGC	1 cut(s)	229
Ksp22I	TGATCA	1 cut(s)	1726
Kzo9I	GATC	6 cut(s)	433, 651, 1173, 1367, 1675, 1726
LguI	GCTCTTC	1 cut(s)	1356
Lsp1109I	GCAGC	7 cut(s)	28, 176, 207, 358, 1034, 1774, 1979
LweI	GCATC	7 cut(s)	358, 385, 553, 886, 1039, 1999, 2251
MabI	ACCWGGT	1 cut(s)	1197
MaeI	CTAG	5 cut(s)	41, 585, 804, 1031, 1500
MaeIII	GTNAC	2 cut(s)	1201, 1829
MalI	GATC	6 cut(s)	435, 653, 1175, 1369, 1677, 1728
MboI	GATC	6 cut(s)	433, 651, 1173, 1367, 1675, 1726
MfeI	CAATTG	1 cut(s)	1112
MflI	RGATCY	1 cut(s)	1675
MhlI	GDGCHC	8 cut(s)	135, 216, 866, 964, 1144, 1197, 1743, 2235
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	1118
MlyI	GAGTC	4 cut(s)	512, 949, 1934, 1994
MmeI	TCCRAC	1 cut(s)	1653
Mox20I	TGGCCA	1 cut(s)	5
MroNI	GCCGGC	1 cut(s)	227
MroXI	GAANNNNTTC	1 cut(s)	1350
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	6 cut(s)	791, 815, 1107, 1532, 2067, 2222
MslI	CAYNNNNRTG	2 cut(s)	332, 1062
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	1474, 1970
MspI	CCGG	6 cut(s)	186, 228, 410, 538, 831, 2237
MspR9I	CCNGG	6 cut(s)	186, 831, 1122, 1199, 1892, 2237
MunI	CAATTG	1 cut(s)	1112
Mva1269I	GAATGC	1 cut(s)	1275
MvaI	CCWGG	3 cut(s)	1122, 1199, 1892
MvnI	CGCG	1 cut(s)	324
MwoI	GCNNNNNNNGC	9 cut(s)	25, 195, 201, 288, 297, 304, 313, 368, 1651
NaeI	GCCGGC	1 cut(s)	229
NarI	GGCGCC	1 cut(s)	1118
NciI	CCSGG	3 cut(s)	186, 831, 2237
NdeII	GATC	6 cut(s)	433, 651, 1173, 1367, 1675, 1726
NgoMIV	GCCGGC	1 cut(s)	227
NlaIV	GGNNCC	8 cut(s)	94, 308, 408, 865, 916, 1119, 1677, 2057
NmeAIII	GCCGAG	1 cut(s)	145
NmuCI	GTSAC	2 cut(s)	1201, 1829
NspI	RCATGY	1 cut(s)	512
NspV	TTCGAA	1 cut(s)	1901
PagI	TCATGA	2 cut(s)	964, 1155
PaqCI	CACCTGC	1 cut(s)	1726
PciSI	GCTCTTC	1 cut(s)	1356
PcsI	WCGNNNNNNNCGW	2 cut(s)	273, 832
PctI	GAATGC	1 cut(s)	1275
PdiI	GCCGGC	1 cut(s)	229
PdmI	GAANNNNTTC	1 cut(s)	1350
PfeI	GAWTC	4 cut(s)	733, 1440, 1756, 1931
PflFI	GACNNNGTC	1 cut(s)	1913
PkrI	GCNGC	9 cut(s)	18, 191, 194, 197, 290, 348, 1024, 1789, 1969
PleI	GAGTC	4 cut(s)	511, 949, 1934, 1993
PluTI	GGCGCC	1 cut(s)	1121
PpsI	GAGTC	4 cut(s)	511, 949, 1934, 1993
PshBI	ATTAAT	1 cut(s)	1532
PsiI	TTATAA	1 cut(s)	2039
Psp124BI	GAGCTC	2 cut(s)	135, 1144
Psp6I	CCWGG	3 cut(s)	1120, 1197, 1890
PspGI	CCWGG	3 cut(s)	1120, 1197, 1890
PspN4I	GGNNCC	8 cut(s)	94, 308, 408, 865, 916, 1119, 1677, 2057
PspPI	GGNCC	6 cut(s)	126, 306, 419, 914, 1220, 2055
PstI	CTGCAG	1 cut(s)	1969
PsuI	RGATCY	1 cut(s)	1675
PsyI	GACNNNGTC	1 cut(s)	1913
PvuII	CAGCTG	2 cut(s)	1474, 1970
RsaI	GTAC	2 cut(s)	116, 1779
RsaNI	GTAC	2 cut(s)	115, 1778
RseI	CAYNNNNRTG	2 cut(s)	332, 1062
SacI	GAGCTC	2 cut(s)	135, 1144
SapI	GCTCTTC	1 cut(s)	1356
SaqAI	TTAA	6 cut(s)	791, 815, 1107, 1532, 2067, 2222
SatI	GCNGC	9 cut(s)	17, 190, 193, 196, 289, 347, 1023, 1788, 1968
Sau3AI	GATC	6 cut(s)	433, 651, 1173, 1367, 1675, 1726
Sau96I	GGNCC	6 cut(s)	126, 306, 419, 914, 1220, 2055
SchI	GAGTC	4 cut(s)	512, 949, 1934, 1994
ScrFI	CCNGG	6 cut(s)	186, 831, 1122, 1199, 1892, 2237
SduI	GDGCHC	8 cut(s)	135, 216, 866, 964, 1144, 1197, 1743, 2235
SexAI	ACCWGGT	1 cut(s)	1197
SfaNI	GCATC	7 cut(s)	358, 385, 553, 886, 1039, 1999, 2251
SfcI	CTRYAG	2 cut(s)	885, 1965
SfoI	GGCGCC	1 cut(s)	1119
SfuI	TTCGAA	1 cut(s)	1901
SinI	GGWCC	3 cut(s)	126, 1220, 2055
SmiMI	CAYNNNNRTG	2 cut(s)	332, 1062
SmlI	CTYRAG	3 cut(s)	350, 1942, 2210
SmoI	CTYRAG	3 cut(s)	350, 1942, 2210
SspDI	GGCGCC	1 cut(s)	1117
SspI	AATATT	1 cut(s)	440
SspMI	CTAG	5 cut(s)	41, 585, 804, 1031, 1500
SstI	GAGCTC	2 cut(s)	135, 1144
StyD4I	CCNGG	6 cut(s)	184, 829, 1120, 1197, 1890, 2235
StyI	CCWWGG	3 cut(s)	6, 40, 261
TaaI	ACNGT	6 cut(s)	582, 932, 1591, 2002, 2055, 2077
TaqI	TCGA	7 cut(s)	108, 252, 561, 1370, 1719, 1813, 1901
TatI	WGTACW	1 cut(s)	1777
TauI	GCSGC	2 cut(s)	195, 291
TfiI	GAWTC	4 cut(s)	733, 1440, 1756, 1931
Tru1I	TTAA	6 cut(s)	791, 815, 1107, 1532, 2067, 2222
Tru9I	TTAA	6 cut(s)	791, 815, 1107, 1532, 2067, 2222
TscAI	CASTG	4 cut(s)	643, 935, 1838, 2080
TseFI	GTSAC	2 cut(s)	1201, 1829
TseI	GCWGC	7 cut(s)	16, 189, 195, 346, 1022, 1787, 1967
Tsp45I	GTSAC	2 cut(s)	1201, 1829
TspRI	CASTG	4 cut(s)	643, 935, 1838, 2080
Tth111I	GACNNNGTC	1 cut(s)	1913
VneI	GTGCAC	2 cut(s)	1193, 1739
VpaK11BI	GGWCC	3 cut(s)	126, 1220, 2055
VspI	ATTAAT	1 cut(s)	1532
XagI	CCTNNNNNAGG	1 cut(s)	426
XapI	RAATTY	6 cut(s)	479, 738, 1146, 1411, 1896, 2041
XceI	RCATGY	1 cut(s)	512
XmaJI	CCTAGG	1 cut(s)	40
XmiI	GTMKAC	1 cut(s)	1908
XmnI	GAANNNNTTC	1 cut(s)	1350
XspI	CTAG	5 cut(s)	41, 585, 804, 1031, 1500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.