Prupe.1G123100_v2.0.a1

beta-D-xylosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012799
Physical Location & Seq
Forward (+)
9651236 .. 9655816
4581 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G123100.1

Sequence Viewer

Length: 2328 bp
ATGGCATACAATATTACTAAGCTTCTCTCACTTGTTTCTCTTCTTCTGTGTCTTTCTTTTTGCACCATTGGAGTTGTCCATGCTCGTCCACCCTTTGCTTGTGACCCTCACAACCCAATAACCAGAGGCCTGAAGTTCTGCAGGGTGACGGTGCCAATCCATGTTAGGGTTCAGGACTTGATCGGACGGTTGACATTGCAGGAGAAGATCAGGCTGCTGGTGAACAATGCTATTGCTGTGCCCAGGCTTGGCATTCAGGGCTACGAGTGGTGGTCTGAAGCACTTCATGGTGTATCCAATGTGGGCCCTGGAACCAAGTTTGGTGGGGCTTTCCCTGGGGCCACCAGCTTCCCTCAAGTCATCACCACCGCTGCTTCCTTCAACGAATCTCTCTGGCAGGAAATCGGACGGGTGGTGTCTGATGAGGCAAGGGCAATGTACAATGGAGGGATGGCTGGCTTGACATATTGGAGCCCAAATGTGAACATATTTCGTGACCCAAGATGGGGCAGAGGCCAAGAGACTCCTGGTGAAGACCCTGTCTTGGCTGCTAAGTATGCTGCTAGGTACGTCAAGGGGCTCCAAGGTGATGGAGCTGGCAATAGGCTTAAGGTTGCTGCATGCTGCAAACATTACACTGCCTATGATCTCGACAACTGGAACGGTGTCAATCGCTTCCATTTCAATGCCAGGGTTAGCAAGCAGGACTTGGTGGACACATATGATGTGCCTTTCAAAGCCTGTGTGGTGGAAGGGAATGTTGCTAGTGTTATGTGCTCCTACAACCAGGTGAATGGGAAGCCTACTTGTGCTGACCCTGATCTCCTCAAGGGCACAATCCGTGGCCAATGGAGACTTAATGGGTATATTGTCTCGGACTGTGATTCAGTTGGTGTTCTATATGACGAGCAACATTACACCAGGACACCAGAAGAAGCAGCCGCTGACGCAATTAAAGCAGGTTTGGACTTGGACTGTGGGCCGTTCCTCGCAATCCATACTGAGGCCGCCGTAAGAAGGGGACTCGTTAGCCAGCTTGAAATTAACTGGGCCTTAGCAAACACGATGACGGTCCAGATGAGGTTGGGTATGTTCGACGGCGAACCATCGGCCCACCAATACGGAAACCTAGGCCCAAGAGACGTGTGCACCCCGGCCCACCAACAGCTAGCCCTTGAAGCTGCTAGGCAAGGCATTGTTCTATTGGAGAACCGTGGGCGTTCACTTCCTCTCTCAACCAGACGCCATAGGACAGTAGCAGTAATTGGGCCCAATTCTGATGTTACTGTCACCATGATTGGAAATTACGCTGGTGTTGCATGTGGTTACACTACACCCCTACAAGGAATTGGGAGGTACACAAGGACCATACACCAAGCGGGGTGCACAGATGTTCATTGCAACGGAAACCAACTATTTGGTGCTGCTGAGGCCGCAGCAAGACAGGCTGATGCAACTGTCTTGGTAATGGGCCTTGACCAATCCATTGAAGCCGAATTCGTAGACCGAGCCGGTCTCCTTTTGCCAGGACACCAACAAGAGCTAGTGTCCAGAGTGGCCAGGGCCTCTAGAGGCCCAACCATCTTGGTCTTGATGTCTGGTGGCCCAATTGATGTCACGTTCGCAAAGAACGATCCACGCATTAGCGCTATTATTTGGGTTGGGTACCCTGGCCAAGCCGGAGGAACTGCCATAGCCGATGTTCTATTTGGGACCACAAACCCAGGAGGAAAGCTTCCCATGACATGGTACCCCCAAAACTATGTAACCCATTTGCCAATGACAGATATGGCCATGAGGGCAGACCCAGCAAGAGGCTACCCTGGCAGGACCTACAGGTTCTACAGAGGCCCAGTTGTCTTCCCATTTGGTCTGGGCCTAAGCTACACAACTTTTGCCCACAATCTGGCACATGGGCCCACATTGGTCTCCGTGCCTCTCACCAGCCTAAAAGCCACCGCAAACTCAACCATGCTGAGCAAAGCTGTGAGAGTGAGCCACGCGGACTGTAATGCACTCTCCCCCCTGGACGTACACGTGGATGTTAAAAACACTGGGTCCATGGATGGGACCCACACTCTTCTGGTGTTCACAAGCCCACCAGATGGAAAATGGGCCTCCAGCAAGCAGCTGATGGGCTTTCACAAGATCCATATAGCAGCCGGGTCGGAGAAACGGGTCAGGATTGCTGTTCATGTGTGCAAGCACCTCAGCGTTGTGGACCGGTTTGGGATCCGAAGAATTCCATTGGGTGAACACAAGCTTCAAATCGGTGACCTCAGCCATCACGTCTCCCTTCAAACCAATTTGGGAGAAATTAAGGTTTAG

Protein Analysis

776

Amino Acids

84.06

Weight (kDa)

8.83

Isoelectric Point (pI)

31.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012799)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49360
fragaria_vesca FvH4_4g19350
malus_domestica MD13G1157400.v1.1 MD16G1158300.v1.1
prunus_persica Prupe.1G123100_v2.0.a1
pyrus_communis pycom16g13320
rosa_chinensis RchiOBHm_Chr4g0424381
rosa_laevigata RLG00000007479
rosa_multiflora Rmu_co8330357.1_g000001 Rmu_sc0003567.1_g000021 Rmu_sc0005995.1_g000003
rosa_roxburghii Rroxscaffold_5G00366330
rosa_rugosa Rorug04G0197100 Rorug04G0197200
rosa_samantha Rh4AG253200 Rh4CG269900 Rh4DG253000
rosa_wichuraiana Rw4G021850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 950
Acc65I GGTACC 2 cut(s) 1665, 1749
AccB1I GGYRCC 3 cut(s) 151, 1665, 1749
AccB7I CCANNNNNTGG 3 cut(s) 1746, 1906, 2105
AccI GTMKAC 1 cut(s) 1503
AccII CGCG 1 cut(s) 2003
AciI CCGC 7 cut(s) 369, 942, 1008, 1379, 1434, 1959, 2003
AclWI GGATC 4 cut(s) 1628, 2143, 2227, 2240
AcoI YGGCCR 4 cut(s) 844, 1557, 1672, 1791
AcsI RAATTY 2 cut(s) 1496, 2241
AcuI CTGAAG 2 cut(s) 152, 297
AcvI CACGTG 1 cut(s) 2038
AcyI GRCGYC 1 cut(s) 1243
AfaI GTAC 6 cut(s) 440, 569, 1358, 1667, 1751, 2034
AfeI AGCGCT 1 cut(s) 1648
AflII CTTAAG 1 cut(s) 608
AflIII ACRYGT 2 cut(s) 1143, 2035
AgeI ACCGGT 1 cut(s) 2223
AgsI TTSAA 8 cut(s) 382, 685, 736, 1040, 1178, 1490, 2267, 2300
AjiI CACGTC 2 cut(s) 1144, 2290
Alw21I GWGCWC 3 cut(s) 779, 1151, 1388
Alw26I GTCTC 7 cut(s) 515, 847, 877, 1134, 1520, 1933, 2296
Alw44I GTGCAC 2 cut(s) 1147, 1384
AlwI GGATC 4 cut(s) 1628, 2143, 2227, 2240
AlwNI CAGNNNCTG 1 cut(s) 944
Aor51HI AGCGCT 1 cut(s) 1648
ApaI GGGCCC 3 cut(s) 308, 1272, 1920
ApaLI GTGCAC 2 cut(s) 1147, 1384
ApoI RAATTY 2 cut(s) 1496, 2241
AsiGI ACCGGT 1 cut(s) 2223
Asp700I GAANNNNTTC 1 cut(s) 282
Asp718I GGTACC 2 cut(s) 1665, 1749
AspA2I CCTAGG 1 cut(s) 1129
AspLEI GCGC 1 cut(s) 1649
AsuC2I CCSGG 2 cut(s) 1154, 2164
AsuNHI GCTAGC 1 cut(s) 1168
AvaII GGWCC 7 cut(s) 1072, 1365, 1713, 1830, 2058, 2070, 2221
AvrII CCTAGG 1 cut(s) 1129
BaeGI GKGCMC 7 cut(s) 243, 308, 836, 1151, 1272, 1388, 1920
BalI TGGCCA 4 cut(s) 846, 1559, 1674, 1793
BamHI GGATCC 1 cut(s) 2232
BanI GGYRCC 3 cut(s) 151, 1665, 1749
BanII GRGCYC 5 cut(s) 308, 476, 582, 1272, 1920
BbrPI CACGTG 1 cut(s) 2038
BbsI GAAGAC 2 cut(s) 540, 1852
Bbv12I GWGCWC 3 cut(s) 779, 1151, 1388
BbvCI CCTCAGC 3 cut(s) 1428, 2210, 2279
BccI CCATC 9 cut(s) 445, 498, 584, 1114, 1589, 2060, 2099, 2128, 2292
BceAI ACGGC 3 cut(s) 967, 995, 1114
BcgI CGANNNNNNTGC 2 cut(s) 2148, 2182
BciVI GTATCC 1 cut(s) 304
BcnI CCSGG 2 cut(s) 1154, 2164
BcoDI GTCTC 7 cut(s) 515, 847, 877, 1134, 1520, 1933, 2296
BfaI CTAG 7 cut(s) 564, 765, 1130, 1169, 1185, 1544, 1569
BfmI CTRYAG 3 cut(s) 139, 1834, 1843
BfoI RGCGCY 1 cut(s) 1650
BfrI CTTAAG 1 cut(s) 608
BfuAI ACCTGC 1 cut(s) 950
BfuI GTATCC 1 cut(s) 304
BglI GCCNNNNNGGC 1 cut(s) 1799
BlnI CCTAGG 1 cut(s) 1129
BlpI GCTNAGC 1 cut(s) 1976
Bme18I GGWCC 7 cut(s) 1072, 1365, 1713, 1830, 2058, 2070, 2221
BmgBI CACGTC 2 cut(s) 1144, 2290
BmrI ACTGGG 3 cut(s) 1057, 1847, 2064
BmsI GCATC 1 cut(s) 1441
BmtI GCTAGC 1 cut(s) 1172
BmuI ACTGGG 3 cut(s) 1057, 1847, 2064
BpiI GAAGAC 2 cut(s) 540, 1852
BplI GAGNNNNNCTC 2 cut(s) 1500, 1532
BpmI CTGGAG 1 cut(s) 2104
Bpu10I CCTNAGC 5 cut(s) 1054, 1428, 1880, 2210, 2279
Bpu1102I GCTNAGC 1 cut(s) 1976
BpuEI CTTGAG 2 cut(s) 339, 812
BpuMI CCSGG 2 cut(s) 1154, 2164
BsaAI YACGTR 1 cut(s) 2038
BsaHI GRCGYC 1 cut(s) 1243
BsaI GGTCTC 2 cut(s) 1520, 1933
BsaWI WCCGGW 1 cut(s) 2223
Bse118I RCCGGY 2 cut(s) 1511, 2223
Bse1I ACTGG 4 cut(s) 662, 1052, 1853, 2059
Bse3DI GCAATG 3 cut(s) 194, 441, 1396
BseGI GGATG 3 cut(s) 456, 2047, 2071
BseMI GCAATG 3 cut(s) 194, 441, 1396
BseMII CTCAG 5 cut(s) 993, 1419, 1967, 2224, 2293
BseNI ACTGG 4 cut(s) 662, 1052, 1853, 2059
BseRI GAGGAG 1 cut(s) 815
BseSI GKGCMC 7 cut(s) 243, 308, 836, 1151, 1272, 1388, 1920
BseYI CCCAGC 1 cut(s) 1807
Bsh1236I CGCG 1 cut(s) 2003
BshNI GGYRCC 3 cut(s) 151, 1665, 1749
BshTI ACCGGT 1 cut(s) 2223
BsiHKAI GWGCWC 3 cut(s) 779, 1151, 1388
BsiSI CCGG 5 cut(s) 1154, 1512, 1680, 2163, 2224
BslFI GGGAC 3 cut(s) 1035, 1726, 2083
BsmAI GTCTC 7 cut(s) 515, 847, 877, 1134, 1520, 1933, 2296
BsmBI CGTCTC 2 cut(s) 1134, 2296
BsmFI GGGAC 3 cut(s) 1035, 1726, 2083
BsmI GAATGC 1 cut(s) 252
Bso31I GGTCTC 2 cut(s) 1520, 1933
Bsp120I GGGCCC 3 cut(s) 304, 1268, 1916
Bsp1407I TGTACA 1 cut(s) 438
Bsp143I GATC 7 cut(s) 180, 207, 646, 820, 1633, 2148, 2232
Bsp1720I GCTNAGC 1 cut(s) 1976
Bsp19I CCATGG 1 cut(s) 2061
BspACI CCGC 7 cut(s) 369, 942, 1008, 1379, 1434, 1959, 2003
BspCNI CTCAG 5 cut(s) 994, 1420, 1968, 2223, 2292
BspFNI CGCG 1 cut(s) 2003
BspMAI CTGCAG 1 cut(s) 143
BspMI ACCTGC 1 cut(s) 950
BspOI GCTAGC 1 cut(s) 1172
BspPI GGATC 4 cut(s) 1628, 2143, 2227, 2240
BspT107I GGYRCC 3 cut(s) 151, 1665, 1749
BspTI CTTAAG 1 cut(s) 608
BspTNI GGTCTC 2 cut(s) 1520, 1933
BsrDI GCAATG 3 cut(s) 194, 441, 1396
BsrFI RCCGGY 2 cut(s) 1511, 2223
BsrGI TGTACA 1 cut(s) 438
BsrI ACTGG 4 cut(s) 662, 1052, 1853, 2059
BssAI RCCGGY 2 cut(s) 1511, 2223
BssMI GATC 7 cut(s) 180, 207, 646, 820, 1633, 2148, 2232
BssNI GRCGYC 1 cut(s) 1243
BssT1I CCWWGG 3 cut(s) 583, 1129, 2061
Bst6I CTCTTC 2 cut(s) 45, 2085
BstACI GRCGYC 1 cut(s) 1243
BstAFI CTTAAG 1 cut(s) 608
BstAUI TGTACA 1 cut(s) 438
BstBAI YACGTR 1 cut(s) 2038
BstC8I GCNNGC 8 cut(s) 457, 598, 622, 701, 1034, 1170, 2126, 2204
BstDEI CTNAG 9 cut(s) 18, 552, 1002, 1054, 1428, 1880, 1976, 2210, 2279
BstDSI CCRYGG 3 cut(s) 841, 1213, 2061
BstEII GGTNACC 1 cut(s) 2273
BstF5I GGATG 3 cut(s) 456, 2047, 2071
BstFNI CGCG 1 cut(s) 2003
BstH2I RGCGCY 1 cut(s) 1650
BstHHI GCGC 1 cut(s) 1649
BstKTI GATC 7 cut(s) 183, 210, 649, 823, 1636, 2151, 2235
BstMAI GTCTC 7 cut(s) 515, 847, 877, 1134, 1520, 1933, 2296
BstMBI GATC 7 cut(s) 180, 207, 646, 820, 1633, 2148, 2232
BstNSI RCATGY 2 cut(s) 624, 1323
BstPI GGTNACC 1 cut(s) 2273
BstSFI CTRYAG 3 cut(s) 139, 1834, 1843
BstSLI GKGCMC 7 cut(s) 243, 308, 836, 1151, 1272, 1388, 1920
BstUI CGCG 1 cut(s) 2003
BstV2I GAAGAC 2 cut(s) 540, 1852
BstX2I RGATCY 2 cut(s) 2148, 2232
BstXI CCANNNNNNTGG 3 cut(s) 590, 794, 1418
BstYI RGATCY 2 cut(s) 2148, 2232
BsuI GTATCC 1 cut(s) 304
BtgI CCRYGG 3 cut(s) 841, 1213, 2061
BtrI CACGTC 2 cut(s) 1144, 2290
BtsCI GGATG 3 cut(s) 456, 2047, 2071
BtsI GCAGTG 1 cut(s) 636
BtsIMutI CAGTG 2 cut(s) 636, 2052
BveI ACCTGC 1 cut(s) 950
Cac8I GCNNGC 8 cut(s) 457, 598, 622, 701, 1034, 1170, 2126, 2204
CaiI CAGNNNCTG 1 cut(s) 944
CfoI GCGC 1 cut(s) 1649
Cfr10I RCCGGY 2 cut(s) 1511, 2223
CseI GACGC 2 cut(s) 956, 1251
CsiI ACCWGGT 1 cut(s) 786
Csp6I GTAC 6 cut(s) 439, 568, 1357, 1666, 1750, 2033
CspAI ACCGGT 1 cut(s) 2223
CspCI CAANNNNNGTGG 2 cut(s) 304, 339
CviQI GTAC 6 cut(s) 439, 568, 1357, 1666, 1750, 2033
DdeI CTNAG 9 cut(s) 18, 552, 1002, 1054, 1428, 1880, 1976, 2210, 2279
DpnI GATC 7 cut(s) 182, 209, 648, 822, 1635, 2150, 2234
DpnII GATC 7 cut(s) 180, 207, 646, 820, 1633, 2148, 2232
EaeI YGGCCR 4 cut(s) 844, 1557, 1672, 1791
Eam1104I CTCTTC 2 cut(s) 45, 2085
EarI CTCTTC 2 cut(s) 45, 2085
Eco130I CCWWGG 3 cut(s) 583, 1129, 2061
Eco147I AGGCCT 1 cut(s) 129
Eco24I GRGCYC 5 cut(s) 308, 476, 582, 1272, 1920
Eco31I GGTCTC 2 cut(s) 1520, 1933
Eco47I GGWCC 7 cut(s) 1072, 1365, 1713, 1830, 2058, 2070, 2221
Eco47III AGCGCT 1 cut(s) 1648
Eco57I CTGAAG 2 cut(s) 152, 297
Eco72I CACGTG 1 cut(s) 2038
Eco91I GGTNACC 1 cut(s) 2273
EcoO109I RGGNCCY 4 cut(s) 305, 1563, 1830, 2070
EcoO65I GGTNACC 1 cut(s) 2273
EcoRI GAATTC 2 cut(s) 1496, 2241
EcoT14I CCWWGG 3 cut(s) 583, 1129, 2061
EcoT38I GRGCYC 5 cut(s) 308, 476, 582, 1272, 1920
ErhI CCWWGG 3 cut(s) 583, 1129, 2061
Esp3I CGTCTC 2 cut(s) 1134, 2296
FalI AAGNNNNNCTT 2 cut(s) 692, 724
FaqI GGGAC 3 cut(s) 1035, 1726, 2083
FauI CCCGC 1 cut(s) 1372
FauNDI CATATG 1 cut(s) 721
FblI GTMKAC 1 cut(s) 1503
FokI GGATG 3 cut(s) 463, 2054, 2078
FriOI GRGCYC 5 cut(s) 308, 476, 582, 1272, 1920
FspBI CTAG 7 cut(s) 564, 765, 1130, 1169, 1185, 1544, 1569
GlaI GCGC 1 cut(s) 1648
GsaI CCCAGC 1 cut(s) 1811
GsuI CTGGAG 1 cut(s) 2104
HaeII RGCGCY 1 cut(s) 1650
HapII CCGG 5 cut(s) 1154, 1512, 1680, 2163, 2224
HgaI GACGC 2 cut(s) 956, 1251
HhaI GCGC 1 cut(s) 1649
Hin1I GRCGYC 1 cut(s) 1243
Hin6I GCGC 1 cut(s) 1647
HinP1I GCGC 1 cut(s) 1647
HincII GTYRAC 1 cut(s) 192
HindII GTYRAC 1 cut(s) 192
HindIII AAGCTT 3 cut(s) 20, 1733, 2261
HinfI GANTC 4 cut(s) 386, 523, 884, 1023
HpaII CCGG 5 cut(s) 1154, 1512, 1680, 2163, 2224
Hpy188I TCNGA 8 cut(s) 185, 277, 407, 421, 877, 1279, 2170, 2237
Hpy188III TCNNGA 8 cut(s) 173, 494, 650, 1075, 1551, 1569, 1591, 2182
Hpy99I CGWCG 1 cut(s) 1100
HpyAV CCTTC 4 cut(s) 388, 746, 1011, 2306
HpyCH4IV ACGT 6 cut(s) 570, 1143, 1619, 2031, 2037, 2289
HpyF3I CTNAG 9 cut(s) 18, 552, 1002, 1054, 1428, 1880, 1976, 2210, 2279
HpySE526I ACGT 6 cut(s) 570, 1143, 1619, 2031, 2037, 2289
Hsp92I GRCGYC 1 cut(s) 1243
HspAI GCGC 1 cut(s) 1647
KflI GGGWCCC 1 cut(s) 2070
KpnI GGTACC 2 cut(s) 1669, 1753
Kzo9I GATC 7 cut(s) 180, 207, 646, 820, 1633, 2148, 2232
LmnI GCTCC 4 cut(s) 471, 585, 593, 782
LweI GCATC 1 cut(s) 1441
MabI ACCWGGT 1 cut(s) 786
MaeI CTAG 7 cut(s) 564, 765, 1130, 1169, 1185, 1544, 1569
MaeII ACGT 6 cut(s) 570, 1143, 1619, 2031, 2037, 2289
MaeIII GTNAC 9 cut(s) 101, 145, 494, 1282, 1288, 1325, 1615, 1765, 2273
MalI GATC 7 cut(s) 182, 209, 648, 822, 1635, 2150, 2234
MboI GATC 7 cut(s) 180, 207, 646, 820, 1633, 2148, 2232
MboII GAAGA 8 cut(s) 32, 35, 217, 545, 944, 1852, 2072, 2250
MfeI CAATTG 1 cut(s) 1608
MflI RGATCY 2 cut(s) 2148, 2232
MlsI TGGCCA 4 cut(s) 846, 1559, 1674, 1793
MluNI TGGCCA 4 cut(s) 846, 1559, 1674, 1793
MlyI GAGTC 2 cut(s) 517, 1017
MmeI TCCRAC 1 cut(s) 2148
Mox20I TGGCCA 4 cut(s) 846, 1559, 1674, 1793
MroXI GAANNNNTTC 1 cut(s) 282
MscI TGGCCA 4 cut(s) 846, 1559, 1674, 1793
MseI TTAA 6 cut(s) 609, 858, 954, 1044, 2046, 2319
MslI CAYNNNNRTG 2 cut(s) 684, 2040
Msp20I TGGCCA 4 cut(s) 846, 1559, 1674, 1793
MspA1I CMGCKG 3 cut(s) 371, 944, 2131
MspCI CTTAAG 1 cut(s) 608
MspI CCGG 5 cut(s) 1154, 1512, 1680, 2163, 2224
MunI CAATTG 1 cut(s) 1608
Mva1269I GAATGC 1 cut(s) 252
MvnI CGCG 1 cut(s) 2003
NciI CCSGG 2 cut(s) 1154, 2164
NcoI CCATGG 1 cut(s) 2061
NdeI CATATG 1 cut(s) 721
NdeII GATC 7 cut(s) 180, 207, 646, 820, 1633, 2148, 2232
NheI GCTAGC 1 cut(s) 1168
NmuCI GTSAC 6 cut(s) 101, 145, 494, 1288, 1615, 2273
NspI RCATGY 2 cut(s) 624, 1323
PaeI GCATGC 1 cut(s) 624
PasI CCCWGGG 1 cut(s) 335
PceI AGGCCT 1 cut(s) 129
PcsI WCGNNNNNNNCGW 1 cut(s) 1629
PctI GAATGC 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 282
PfeI GAWTC 2 cut(s) 386, 884
PflFI GACNNNGTC 1 cut(s) 539
PflMI CCANNNNNTGG 3 cut(s) 1746, 1906, 2105
PinAI ACCGGT 1 cut(s) 2223
PleI GAGTC 2 cut(s) 517, 1017
PmaCI CACGTG 1 cut(s) 2038
PmlI CACGTG 1 cut(s) 2038
PpsI GAGTC 2 cut(s) 517, 1017
Ppu21I YACGTR 1 cut(s) 2038
PpuMI RGGWCCY 2 cut(s) 1830, 2070
Psp5II RGGWCCY 2 cut(s) 1830, 2070
PspCI CACGTG 1 cut(s) 2038
PspEI GGTNACC 1 cut(s) 2273
PspFI CCCAGC 1 cut(s) 1807
PspOMI GGGCCC 3 cut(s) 304, 1268, 1916
PspPPI RGGWCCY 2 cut(s) 1830, 2070
PstI CTGCAG 1 cut(s) 143
PstNI CAGNNNCTG 1 cut(s) 944
PsuI RGATCY 2 cut(s) 2148, 2232
PsyI GACNNNGTC 1 cut(s) 539
PvuII CAGCTG 1 cut(s) 2131
RsaI GTAC 6 cut(s) 440, 569, 1358, 1667, 1751, 2034
RsaNI GTAC 6 cut(s) 439, 568, 1357, 1666, 1750, 2033
RseI CAYNNNNRTG 2 cut(s) 684, 2040
SaqAI TTAA 6 cut(s) 609, 858, 954, 1044, 2046, 2319
Sau3AI GATC 7 cut(s) 180, 207, 646, 820, 1633, 2148, 2232
SchI GAGTC 2 cut(s) 517, 1017
SexAI ACCWGGT 1 cut(s) 786
SfaNI GCATC 1 cut(s) 1441
SfcI CTRYAG 3 cut(s) 139, 1834, 1843
SinI GGWCC 7 cut(s) 1072, 1365, 1713, 1830, 2058, 2070, 2221
SmiMI CAYNNNNRTG 2 cut(s) 684, 2040
SmlI CTYRAG 3 cut(s) 354, 608, 827
SmoI CTYRAG 3 cut(s) 354, 608, 827
SphI GCATGC 1 cut(s) 624
SseBI AGGCCT 1 cut(s) 129
SsiI CCGC 7 cut(s) 369, 942, 1008, 1379, 1434, 1959, 2003
SspI AATATT 1 cut(s) 13
SspMI CTAG 7 cut(s) 564, 765, 1130, 1169, 1185, 1544, 1569
StuI AGGCCT 1 cut(s) 129
StyI CCWWGG 3 cut(s) 583, 1129, 2061
TaiI ACGT 6 cut(s) 573, 1146, 1622, 2034, 2040, 2292
TaqI TCGA 2 cut(s) 651, 1095
TaqII GACCGA 1 cut(s) 1521
TatI WGTACW 1 cut(s) 438
TauI GCSGC 3 cut(s) 944, 1010, 1436
TfiI GAWTC 2 cut(s) 386, 884
Tru1I TTAA 6 cut(s) 609, 858, 954, 1044, 2046, 2319
Tru9I TTAA 6 cut(s) 609, 858, 954, 1044, 2046, 2319
TscAI CASTG 2 cut(s) 643, 2059
TseFI GTSAC 6 cut(s) 101, 145, 494, 1288, 1615, 2273
Tsp45I GTSAC 6 cut(s) 101, 145, 494, 1288, 1615, 2273
TspDTI ATGAA 3 cut(s) 275, 1385, 2183
TspGWI ACGGA 4 cut(s) 830, 1137, 1419, 1921
TspRI CASTG 2 cut(s) 643, 2059
Tth111I GACNNNGTC 1 cut(s) 539
Van91I CCANNNNNTGG 3 cut(s) 1746, 1906, 2105
Vha464I CTTAAG 1 cut(s) 608
VneI GTGCAC 2 cut(s) 1147, 1384
VpaK11BI GGWCC 7 cut(s) 1072, 1365, 1713, 1830, 2058, 2070, 2221
XapI RAATTY 2 cut(s) 1496, 2241
XbaI TCTAGA 1 cut(s) 1568
XceI RCATGY 2 cut(s) 624, 1323
XcmI CCANNNNNNNNNTGG 2 cut(s) 524, 2109
XmaJI CCTAGG 1 cut(s) 1129
XmiI GTMKAC 1 cut(s) 1503
XmnI GAANNNNTTC 1 cut(s) 282
XspI CTAG 7 cut(s) 564, 765, 1130, 1169, 1185, 1544, 1569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.