Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0012799

Physical Location & Seq

Genomic Coordinates Reverse (-)

46826924 .. 46831586

Gene Structure 4663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG253000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGCTTCTGGTTACAATAATAAGCTTTCCCTTCTTGCTCTTGTTCTCTGTGTATCAGCATTGTTGCTCTGCAGCACGTTTAATCTGGTACATGCGCGTCCACCCTTTGCATGTGACCCTCGGAACCCGTTAACGAGAGGGTTCAAGTTCTGCAGGACGAGGGTGCCGGTCCACATGAGGGTTCAGGACCTGATCGGACGGCTGACATTGCAGGAGAAGATTAGGCTGCTGGTGAACAATGCCATAGCTGTGCCGAGGCTCGGCATTCAGGGGTACGAGTGGTGGTCGGAGGCGCTTCACGGTGTCTCTAATGTGGGCCCCGGGACTAAGTTTGGCGGGGCATTTCCGGGCGCCACTAGCTTCCCTCAAGTCATCACCACCGCCGCTTCCTTCAATCAATCACTGTGGCAAGAAATCGGTCAGGTGGTGTCTGATGAGGCAAGAGCAATGTACAATGGAGGCCAGGCTGGTTTGACATATTGGAGCCCTAACGTGAACATATTCCGTGACCCGCGATGGGGAAGAGGACAAGAAACTCCTGGGGAAGACCCTGTTTTGGCTGCTAAGTATGCTGCTAGCTATGTCAAGGGTCTCCAAGGTGATGGAGCTGGAAACCGGCTTAAGGTTGCGGCATGTTGTAAGCATTACACGGCCTATGATCTTGACAATTGGAATGGCGTCGATCGCTTCCATTTCAATGCCAGGGTTAGCAAGCAGGACTTGGCAGACACATATGACGTTCCGTTTAGAGGCTGTGTGTTAGAAGGAAAGGTTGCTAGTGTCATGTGCTCATACAACCAAGTCAATGGAAAGCCTACTTGTGCTGACCCTGATCTCCTAAAGAACACAATCCGTGGCCAATGGAAACTCAATGGGTACATAGTCTCCGACTGTGACTCGGTGGGAGTCTTGTATGATGAGCAACATTACACCAAGACACCAGAAGAAGCGGCGGCGGACGCGATCAAAGCGGGTTTGGATCTGGACTGTGGGCCGTTTCTCGCAATCCATACAGAGGGCGCTATAAAGTCCGGCCTGCTACAAGAGATCGACGTGAACTATGCGCTAGCAAACACTCTCACAGTCCAAATGAGACTTGGGATGTTTGATGGCGAACCATCGACCCAACAATACGGAAACTTGGGCCCAAGAGATGTTTGCACCCTGGCCCACCAACAGTTGGCACTTGAGGCCGCTAGGCAAGGCATTGTCCTGCTTCAAAACAATCGGCATTTGCTGCCTCTCTCAACTGTGCGTCACAGTACCATAGCTGTAATTGGGCCCAACTCGGATGTTACTGTCACGATGATAGGAAATTATGCTGGTGTTGCATGTGGCTACACAACTCCCCTGCAAGGAATTGGGAGGTACACAAAGACCATTCATCAACAAGGGTGCACCGATGTTGCTTGCACTAGTAACCAACTATTTAGGGCAGCTGAGGCTGCAGCCCGGCAGGCCGATGCGACCGTCTTAGTTATGGGCCTCGACCAATCTATCGAAGCTGAATTCAGGGATAGGACTGGGCTGCTCTTGCCGGGACACCAACAAGAGCTCGTGTCGAGAGTGGCTCAGGCCTCTAGAGGCCCAACCATATTGGTCTTGATGTCTGGTGGCCCAATTGATGTGTCGTTTGCGAAGAACGACCCAAAAATTGGAGCCATAATTTGGGTTGGATATCCTGGTCAAGCAGGAGGAACTGCAATTGCTGATGTTCTGTTTGGGACTACCAATCCAGGTGGGAAGCTACCGATGACATGGTACCCCCAAGACTATGTTTCCAAAGTGCCCATGACAAACATGGCCATGCGTCCCGCCAGAGGCTACCCCGGTAGGACGTACCGATTCTACAAAGGTCCCGTGGTATTTCCCTTCGGTCTCGGCTTAAGCTACACCACCTTTGCCCACTCACTGGCCCAAGTTCCCACGTCGATTTCGGTGCACCTCACAAGTCTAAGTGCCACCACAAACTCAACCATGCTAAGCAGTGCTGTGAGAGCCAGCCACACAAATTGTAATTCTCTCTCACTTCCTGTTCATGTTGATGTTAAAAACATCGGAGCTAGGGATGGAACTCACACTCTTCTAGTATTCTCGAGCCCGCCTTTGGGGAAATGGGCCGCAAACAAGCAATTGGTGGGCTTTCACAAGGTCCATATTCTGGCCGGATCTCAGAAACGGGTCAAGGTTGATGTTCATGTTTGCAAGCACCTCAGTGTTGTTGACCAGTTTGGCATTCGAAGAATTCCGATTGGTGAACATAAGCTTCAGATTGGAGATCTAGAGCATCACATCTCCATTGAAGTCAATTTAGGAGATATTATATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0007275 GO:0008150 GO:0009505 GO:0009791 GO:0010154 GO:0010214 GO:0016787 GO:0016798 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0044464 GO:0046556 GO:0048046 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

776

Amino Acids

84.03

Weight (kDa)

8.68

Isoelectric Point (pI)

32.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	115 - 330	1.5e-34	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	403 - 631	2e-52	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	697 - 760	3e-08	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012799)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49360
fragaria_vesca	FvH4_4g19350
malus_domestica	MD13G1157400.v1.1 MD16G1158300.v1.1
prunus_persica	Prupe.1G123100_v2.0.a1
pyrus_communis	pycom16g13320
rosa_chinensis	RchiOBHm_Chr4g0424381
rosa_laevigata	RLG00000007479
rosa_multiflora	Rmu_co8330357.1_g000001 Rmu_sc0003567.1_g000021 Rmu_sc0005995.1_g000003
rosa_roxburghii	Rroxscaffold_5G00366330
rosa_rugosa	Rorug04G0197100 Rorug04G0197200
rosa_samantha	Rh4AG253200 Rh4CG269900 Rh4DG253000
rosa_wichuraiana	Rw4G021850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1761
AccB1I	GGYRCC	3 cut(s)	163, 350, 1761
AccB7I	CCANNNNNTGG	5 cut(s)	1180, 1655, 1668, 1912, 2161
AccII	CGCG	3 cut(s)	97, 514, 962
AclWI	GGATC	2 cut(s)	987, 2176
AcoI	YGGCCR	3 cut(s)	856, 1803, 2163
AcsI	RAATTY	2 cut(s)	1508, 2244
AcuI	CTGAAG	1 cut(s)	2252
AcyI	GRCGYC	2 cut(s)	351, 678
AfaI	GTAC	8 cut(s)	90, 275, 452, 878, 1264, 1370, 1763, 1841
AflII	CTTAAG	2 cut(s)	620, 1885
AgsI	TTSAA	5 cut(s)	145, 394, 697, 1220, 2303
AhlI	ACTAGT	1 cut(s)	1415
AjiI	CACGTC	2 cut(s)	1054, 1929
AjnI	CCWGG	6 cut(s)	462, 538, 701, 1164, 1681, 1735
AleI	CACNNNNGTG	1 cut(s)	2214
Alw21I	GWGCWC	4 cut(s)	791, 1400, 1557, 1944
Alw26I	GTCTC	5 cut(s)	310, 596, 889, 1087, 1883
Alw44I	GTGCAC	2 cut(s)	1396, 1940
AlwI	GGATC	2 cut(s)	987, 2176
AlwNI	CAGNNNCTG	1 cut(s)	190
Ama87I	CYCGRG	2 cut(s)	320, 2095
ApaI	GGGCCC	3 cut(s)	320, 1148, 1284
ApaLI	GTGCAC	2 cut(s)	1396, 1940
ApeKI	GCWGC	9 cut(s)	72, 226, 560, 572, 1237, 1436, 1445, 1448, 1528
ApoI	RAATTY	2 cut(s)	1508, 2244
Asp700I	GAANNNNTTC	1 cut(s)	500
Asp718I	GGTACC	1 cut(s)	1761
AspLEI	GCGC	5 cut(s)	97, 295, 353, 1022, 1066
AsuC2I	CCSGG	6 cut(s)	321, 322, 348, 1453, 1539, 1830
AsuHPI	GGTGA	4 cut(s)	244, 367, 611, 2267
AsuII	TTCGAA	1 cut(s)	2239
AsuNHI	GCTAGC	2 cut(s)	575, 1066
AvaI	CYCGRG	2 cut(s)	320, 2095
AvaII	GGWCC	4 cut(s)	169, 187, 1856, 2152
BaeGI	GKGCMC	6 cut(s)	320, 1148, 1284, 1400, 1791, 1944
BalI	TGGCCA	2 cut(s)	858, 1805
BanI	GGYRCC	3 cut(s)	163, 350, 1761
BanII	GRGCYC	6 cut(s)	320, 488, 1148, 1284, 1557, 2102
BauI	CACGAG	1 cut(s)	1556
BbsI	GAAGAC	1 cut(s)	552
Bbv12I	GWGCWC	4 cut(s)	791, 1400, 1557, 1944
BbvCI	CCTCAGC	1 cut(s)	1440
BbvI	GCAGC	9 cut(s)	84, 213, 547, 559, 1224, 1432, 1448, 1460, 1515
BccI	CCATC	5 cut(s)	510, 596, 1103, 1126, 2063
BceAI	ACGGC	3 cut(s)	215, 666, 979
BcgI	CGANNNNNNTGC	2 cut(s)	1921, 1955
BciT130I	CCWGG	6 cut(s)	464, 540, 703, 1166, 1683, 1737
BcnI	CCSGG	6 cut(s)	321, 322, 348, 1453, 1539, 1830
BcoDI	GTCTC	5 cut(s)	310, 596, 889, 1087, 1883
BcuI	ACTAGT	1 cut(s)	1415
BfmI	CTRYAG	3 cut(s)	70, 151, 1446
BfoI	RGCGCY	3 cut(s)	296, 354, 1023
BfrI	CTTAAG	2 cut(s)	620, 1885
BglI	GCCNNNNNGGC	1 cut(s)	1457
BglII	AGATCT	1 cut(s)	2278
BlpI	GCTNAGC	1 cut(s)	1982
Bme18I	GGWCC	4 cut(s)	169, 187, 1856, 2152
BmeT110I	CYCGRG	2 cut(s)	320, 2095
BmgBI	CACGTC	2 cut(s)	1054, 1929
BmrI	ACTGGG	1 cut(s)	1533
BmsI	GCATC	2 cut(s)	1453, 2296
BmtI	GCTAGC	2 cut(s)	579, 1070
BmuI	ACTGGG	1 cut(s)	1533
BpiI	GAAGAC	1 cut(s)	552
BplI	GAGNNNNNCTC	2 cut(s)	1555, 1587
Bpu10I	CCTNAGC	2 cut(s)	1440, 1572
Bpu1102I	GCTNAGC	1 cut(s)	1982
Bpu14I	TTCGAA	1 cut(s)	2239
BpuEI	CTTGAG	2 cut(s)	351, 1208
BpuMI	CCSGG	6 cut(s)	321, 322, 348, 1453, 1539, 1830
BsaHI	GRCGYC	2 cut(s)	351, 678
BsaI	GGTCTC	2 cut(s)	596, 1883
BsaXI	ACNNNNNCTCC	2 cut(s)	869, 899
Bse118I	RCCGGY	2 cut(s)	166, 615
Bse1I	ACTGG	3 cut(s)	1528, 1917, 2227
Bse3DI	GCAATG	2 cut(s)	206, 453
BseBI	CCWGG	6 cut(s)	464, 540, 703, 1166, 1683, 1737
BseGI	GGATG	3 cut(s)	1107, 1297, 2074
BseMI	GCAATG	2 cut(s)	206, 453
BseMII	CTCAG	4 cut(s)	1431, 1586, 2186, 2227
BseNI	ACTGG	3 cut(s)	1528, 1917, 2227
BseSI	GKGCMC	6 cut(s)	320, 1148, 1284, 1400, 1791, 1944
BseXI	GCAGC	9 cut(s)	84, 213, 547, 559, 1224, 1432, 1448, 1460, 1515
Bsh1236I	CGCG	3 cut(s)	97, 514, 962
Bsh1285I	CGRYCG	2 cut(s)	685, 1470
BshNI	GGYRCC	3 cut(s)	163, 350, 1761
BsiEI	CGRYCG	2 cut(s)	685, 1470
BsiHKAI	GWGCWC	4 cut(s)	791, 1400, 1557, 1944
BsiHKCI	CYCGRG	2 cut(s)	320, 2095
BsiSI	CCGG	9 cut(s)	167, 321, 347, 616, 1032, 1453, 1538, 1830, 2166
BslFI	GGGAC	5 cut(s)	337, 1554, 1738, 1797, 1842
BsmAI	GTCTC	5 cut(s)	310, 596, 889, 1087, 1883
BsmFI	GGGAC	5 cut(s)	337, 1554, 1738, 1797, 1842
BsmI	GAATGC	2 cut(s)	264, 2235
Bso31I	GGTCTC	2 cut(s)	596, 1883
BsoBI	CYCGRG	2 cut(s)	320, 2095
Bsp119I	TTCGAA	1 cut(s)	2239
Bsp120I	GGGCCC	3 cut(s)	316, 1144, 1280
Bsp1407I	TGTACA	1 cut(s)	450
Bsp143I	GATC	9 cut(s)	192, 658, 682, 832, 963, 979, 1047, 2168, 2278
Bsp1720I	GCTNAGC	1 cut(s)	1982
BspCNI	CTCAG	4 cut(s)	1432, 1585, 2185, 2226
BspFNI	CGCG	3 cut(s)	97, 514, 962
BspMAI	CTGCAG	3 cut(s)	74, 155, 1450
BspOI	GCTAGC	2 cut(s)	579, 1070
BspPI	GGATC	2 cut(s)	987, 2176
BspT104I	TTCGAA	1 cut(s)	2239
BspT107I	GGYRCC	3 cut(s)	163, 350, 1761
BspTI	CTTAAG	2 cut(s)	620, 1885
BspTNI	GGTCTC	2 cut(s)	596, 1883
BsrDI	GCAATG	2 cut(s)	206, 453
BsrFI	RCCGGY	2 cut(s)	166, 615
BsrGI	TGTACA	1 cut(s)	450
BsrI	ACTGG	3 cut(s)	1528, 1917, 2227
BssAI	RCCGGY	2 cut(s)	166, 615
BssMI	GATC	9 cut(s)	192, 658, 682, 832, 963, 979, 1047, 2168, 2278
BssNI	GRCGYC	2 cut(s)	351, 678
BssSI	CACGAG	1 cut(s)	1556
BssT1I	CCWWGG	1 cut(s)	595
Bst2BI	CACGAG	1 cut(s)	1556
Bst2UI	CCWGG	6 cut(s)	464, 540, 703, 1166, 1683, 1737
Bst6I	CTCTTC	2 cut(s)	517, 2088
BstACI	GRCGYC	2 cut(s)	351, 678
BstAFI	CTTAAG	2 cut(s)	620, 1885
BstAPI	GCANNNNNTGC	1 cut(s)	1237
BstAUI	TGTACA	1 cut(s)	450
BstBI	TTCGAA	1 cut(s)	2239
BstC8I	GCNNGC	9 cut(s)	577, 713, 1037, 1068, 1411, 1458, 2002, 2102, 2207
BstDEI	CTNAG	9 cut(s)	327, 564, 1440, 1474, 1572, 1955, 1982, 2172, 2213
BstDSI	CCRYGG	2 cut(s)	853, 1860
BstF5I	GGATG	3 cut(s)	1107, 1297, 2074
BstFNI	CGCG	3 cut(s)	97, 514, 962
BstH2I	RGCGCY	3 cut(s)	296, 354, 1023
BstHHI	GCGC	5 cut(s)	97, 295, 353, 1022, 1066
BstKTI	GATC	9 cut(s)	195, 661, 685, 835, 966, 982, 1050, 2171, 2281
BstMAI	GTCTC	5 cut(s)	310, 596, 889, 1087, 1883
BstMBI	GATC	9 cut(s)	192, 658, 682, 832, 963, 979, 1047, 2168, 2278
BstMCI	CGRYCG	2 cut(s)	685, 1470
BstNI	CCWGG	6 cut(s)	464, 540, 703, 1166, 1683, 1737
BstNSI	RCATGY	4 cut(s)	95, 114, 636, 1335
BstSFI	CTRYAG	3 cut(s)	70, 151, 1446
BstSLI	GKGCMC	6 cut(s)	320, 1148, 1284, 1400, 1791, 1944
BstUI	CGCG	3 cut(s)	97, 514, 962
BstV1I	GCAGC	9 cut(s)	84, 213, 547, 559, 1224, 1432, 1448, 1460, 1515
BstV2I	GAAGAC	1 cut(s)	552
BstX2I	RGATCY	3 cut(s)	979, 2168, 2278
BstXI	CCANNNNNNTGG	2 cut(s)	602, 806
BstYI	RGATCY	3 cut(s)	979, 2168, 2278
BtgI	CCRYGG	2 cut(s)	853, 1860
BtgZI	GCGATG	1 cut(s)	529
BtrI	CACGTC	2 cut(s)	1054, 1929
BtsCI	GGATG	3 cut(s)	1107, 1297, 2074
BtsI	GCAGTG	1 cut(s)	1993
BtsIMutI	CAGTG	4 cut(s)	401, 1910, 1993, 2221
Cac8I	GCNNGC	9 cut(s)	577, 713, 1037, 1068, 1411, 1458, 2002, 2102, 2207
CaiI	CAGNNNCTG	1 cut(s)	190
CfoI	GCGC	5 cut(s)	97, 295, 353, 1022, 1066
Cfr10I	RCCGGY	2 cut(s)	166, 615
Cfr9I	CCCGGG	1 cut(s)	320
CseI	GACGC	5 cut(s)	86, 667, 968, 1244, 1799
Csp6I	GTAC	8 cut(s)	89, 274, 451, 877, 1263, 1369, 1762, 1840
CspCI	CAANNNNNGTGG	6 cut(s)	386, 421, 1720, 1755, 1994, 2029
CviQI	GTAC	8 cut(s)	89, 274, 451, 877, 1263, 1369, 1762, 1840
DdeI	CTNAG	9 cut(s)	327, 564, 1440, 1474, 1572, 1955, 1982, 2172, 2213
DinI	GGCGCC	1 cut(s)	352
DpnI	GATC	9 cut(s)	194, 660, 684, 834, 965, 981, 1049, 2170, 2280
DpnII	GATC	9 cut(s)	192, 658, 682, 832, 963, 979, 1047, 2168, 2278
EaeI	YGGCCR	3 cut(s)	856, 1803, 2163
Eam1104I	CTCTTC	2 cut(s)	517, 2088
EarI	CTCTTC	2 cut(s)	517, 2088
EciI	GGCGGA	1 cut(s)	971
Ecl136II	GAGCTC	1 cut(s)	1555
Eco130I	CCWWGG	1 cut(s)	595
Eco147I	AGGCCT	1 cut(s)	1577
Eco24I	GRGCYC	6 cut(s)	320, 488, 1148, 1284, 1557, 2102
Eco31I	GGTCTC	2 cut(s)	596, 1883
Eco32I	GATATC	1 cut(s)	1679
Eco47I	GGWCC	4 cut(s)	169, 187, 1856, 2152
Eco53kI	GAGCTC	1 cut(s)	1555
Eco57I	CTGAAG	1 cut(s)	2252
Eco88I	CYCGRG	2 cut(s)	320, 2095
EcoICRI	GAGCTC	1 cut(s)	1555
EcoO109I	RGGNCCY	3 cut(s)	187, 317, 1856
EcoRI	GAATTC	2 cut(s)	1508, 2244
EcoRII	CCWGG	6 cut(s)	462, 538, 701, 1164, 1681, 1735
EcoRV	GATATC	1 cut(s)	1679
EcoT14I	CCWWGG	1 cut(s)	595
EcoT38I	GRGCYC	6 cut(s)	320, 488, 1148, 1284, 1557, 2102
EgeI	GGCGCC	1 cut(s)	352
EheI	GGCGCC	1 cut(s)	352
ErhI	CCWWGG	1 cut(s)	595
FalI	AAGNNNNNCTT	2 cut(s)	704, 736
FaqI	GGGAC	5 cut(s)	337, 1554, 1738, 1797, 1842
FauI	CCCGC	5 cut(s)	329, 519, 964, 1822, 2109
FauNDI	CATATG	1 cut(s)	733
FokI	GGATG	3 cut(s)	1114, 1304, 2081
FriOI	GRGCYC	6 cut(s)	320, 488, 1148, 1284, 1557, 2102
GlaI	GCGC	5 cut(s)	96, 294, 352, 1021, 1065
HaeII	RGCGCY	3 cut(s)	296, 354, 1023
HapII	CCGG	9 cut(s)	167, 321, 347, 616, 1032, 1453, 1538, 1830, 2166
HgaI	GACGC	5 cut(s)	86, 667, 968, 1244, 1799
HhaI	GCGC	5 cut(s)	97, 295, 353, 1022, 1066
Hin1I	GRCGYC	2 cut(s)	351, 678
Hin6I	GCGC	5 cut(s)	95, 293, 351, 1020, 1064
HinP1I	GCGC	5 cut(s)	95, 293, 351, 1020, 1064
HincII	GTYRAC	2 cut(s)	132, 2224
HindII	GTYRAC	2 cut(s)	132, 2224
HindIII	AAGCTT	2 cut(s)	23, 2264
HinfI	GANTC	3 cut(s)	896, 906, 1845
HpaI	GTTAAC	1 cut(s)	132
HpaII	CCGG	9 cut(s)	167, 321, 347, 616, 1032, 1453, 1538, 1830, 2166
HphI	GGTGA	4 cut(s)	244, 367, 611, 2267
Hpy188III	TCNNGA	9 cut(s)	185, 662, 983, 1303, 1563, 1581, 1603, 2095, 2282
Hpy99I	CGWCG	3 cut(s)	683, 1055, 1933
HpyAV	CCTTC	4 cut(s)	41, 400, 758, 1882
HpyCH4IV	ACGT	6 cut(s)	77, 492, 738, 1053, 1838, 1928
HpyF3I	CTNAG	9 cut(s)	327, 564, 1440, 1474, 1572, 1955, 1982, 2172, 2213
HpySE526I	ACGT	6 cut(s)	77, 492, 738, 1053, 1838, 1928
Hsp92I	GRCGYC	2 cut(s)	351, 678
HspAI	GCGC	5 cut(s)	95, 293, 351, 1020, 1064
KasI	GGCGCC	1 cut(s)	350
KpnI	GGTACC	1 cut(s)	1765
KspAI	GTTAAC	1 cut(s)	132
Kzo9I	GATC	9 cut(s)	192, 658, 682, 832, 963, 979, 1047, 2168, 2278
LmnI	GCTCC	4 cut(s)	483, 605, 1658, 2060
Lsp1109I	GCAGC	9 cut(s)	84, 213, 547, 559, 1224, 1432, 1448, 1460, 1515
LweI	GCATC	2 cut(s)	1453, 2296
MaeII	ACGT	6 cut(s)	77, 492, 738, 1053, 1838, 1928
MaeIII	GTNAC	8 cut(s)	11, 113, 506, 893, 1256, 1294, 1300, 1418
MalI	GATC	9 cut(s)	194, 660, 684, 834, 965, 981, 1049, 2170, 2280
MboI	GATC	9 cut(s)	192, 658, 682, 832, 963, 979, 1047, 2168, 2278
MboII	GAAGA	7 cut(s)	229, 534, 557, 956, 1651, 2075, 2253
MfeI	CAATTG	4 cut(s)	667, 1620, 1704, 2132
MflI	RGATCY	3 cut(s)	979, 2168, 2278
MlsI	TGGCCA	2 cut(s)	858, 1805
MluNI	TGGCCA	2 cut(s)	858, 1805
Mly113I	GGCGCC	1 cut(s)	351
MlyI	GAGTC	2 cut(s)	890, 915
MmeI	TCCRAC	3 cut(s)	267, 912, 1654
Mox20I	TGGCCA	2 cut(s)	858, 1805
MroXI	GAANNNNTTC	1 cut(s)	500
MscI	TGGCCA	2 cut(s)	858, 1805
MseI	TTAA	6 cut(s)	81, 131, 621, 1886, 2049, 2329
MslI	CAYNNNNRTG	5 cut(s)	248, 696, 1805, 2043, 2214
Msp20I	TGGCCA	2 cut(s)	858, 1805
MspA1I	CMGCKG	1 cut(s)	1439
MspCI	CTTAAG	2 cut(s)	620, 1885
MspI	CCGG	9 cut(s)	167, 321, 347, 616, 1032, 1453, 1538, 1830, 2166
MunI	CAATTG	4 cut(s)	667, 1620, 1704, 2132
Mva1269I	GAATGC	2 cut(s)	264, 2235
MvaI	CCWGG	6 cut(s)	464, 540, 703, 1166, 1683, 1737
MvnI	CGCG	3 cut(s)	97, 514, 962
NarI	GGCGCC	1 cut(s)	351
NciI	CCSGG	6 cut(s)	321, 322, 348, 1453, 1539, 1830
NdeI	CATATG	1 cut(s)	733
NdeII	GATC	9 cut(s)	192, 658, 682, 832, 963, 979, 1047, 2168, 2278
NheI	GCTAGC	2 cut(s)	575, 1066
NmeAIII	GCCGAG	3 cut(s)	240, 279, 1860
NmuCI	GTSAC	5 cut(s)	113, 506, 893, 1256, 1300
NspI	RCATGY	4 cut(s)	95, 114, 636, 1335
NspV	TTCGAA	1 cut(s)	2239
OliI	CACNNNNGTG	1 cut(s)	2214
PaeR7I	CTCGAG	1 cut(s)	2095
PceI	AGGCCT	1 cut(s)	1577
PctI	GAATGC	2 cut(s)	264, 2235
PdmI	GAANNNNTTC	1 cut(s)	500
PfeI	GAWTC	1 cut(s)	1845
PflMI	CCANNNNNTGG	5 cut(s)	1180, 1655, 1668, 1912, 2161
Ple19I	CGATCG	1 cut(s)	685
PleI	GAGTC	2 cut(s)	890, 914
PluTI	GGCGCC	1 cut(s)	354
PpsI	GAGTC	2 cut(s)	890, 914
PpuMI	RGGWCCY	2 cut(s)	187, 1856
Psp124BI	GAGCTC	1 cut(s)	1557
Psp5II	RGGWCCY	2 cut(s)	187, 1856
Psp6I	CCWGG	6 cut(s)	462, 538, 701, 1164, 1681, 1735
PspGI	CCWGG	6 cut(s)	462, 538, 701, 1164, 1681, 1735
PspOMI	GGGCCC	3 cut(s)	316, 1144, 1280
PspPPI	RGGWCCY	2 cut(s)	187, 1856
PstI	CTGCAG	3 cut(s)	74, 155, 1450
PstNI	CAGNNNCTG	1 cut(s)	190
PsuI	RGATCY	3 cut(s)	979, 2168, 2278
PvuI	CGATCG	1 cut(s)	685
PvuII	CAGCTG	1 cut(s)	1439
RsaI	GTAC	8 cut(s)	90, 275, 452, 878, 1264, 1370, 1763, 1841
RsaNI	GTAC	8 cut(s)	89, 274, 451, 877, 1263, 1369, 1762, 1840
RseI	CAYNNNNRTG	5 cut(s)	248, 696, 1805, 2043, 2214
SacI	GAGCTC	1 cut(s)	1557
SaqAI	TTAA	6 cut(s)	81, 131, 621, 1886, 2049, 2329
Sau3AI	GATC	9 cut(s)	192, 658, 682, 832, 963, 979, 1047, 2168, 2278
SchI	GAGTC	2 cut(s)	890, 915
SfaNI	GCATC	2 cut(s)	1453, 2296
SfcI	CTRYAG	3 cut(s)	70, 151, 1446
SfoI	GGCGCC	1 cut(s)	352
Sfr274I	CTCGAG	1 cut(s)	2095
SfuI	TTCGAA	1 cut(s)	2239
SinI	GGWCC	4 cut(s)	169, 187, 1856, 2152
SlaI	CTCGAG	1 cut(s)	2095
SmaI	CCCGGG	1 cut(s)	322
SmiMI	CAYNNNNRTG	5 cut(s)	248, 696, 1805, 2043, 2214
SmlI	CTYRAG	5 cut(s)	366, 620, 1187, 1885, 2095
SmoI	CTYRAG	5 cut(s)	366, 620, 1187, 1885, 2095
SpeI	ACTAGT	1 cut(s)	1415
SseBI	AGGCCT	1 cut(s)	1577
SspDI	GGCGCC	1 cut(s)	350
SstI	GAGCTC	1 cut(s)	1557
StuI	AGGCCT	1 cut(s)	1577
StyI	CCWWGG	1 cut(s)	595
TaiI	ACGT	6 cut(s)	80, 495, 741, 1056, 1841, 1931
TaqI	TCGA	9 cut(s)	681, 1050, 1121, 1488, 1500, 1562, 1931, 2096, 2239
TaqII	GACCGA	2 cut(s)	407, 1865
TatI	WGTACW	1 cut(s)	450
TauI	GCSGC	6 cut(s)	386, 632, 953, 956, 1196, 2123
TfiI	GAWTC	1 cut(s)	1845
Tru1I	TTAA	6 cut(s)	81, 131, 621, 1886, 2049, 2329
Tru9I	TTAA	6 cut(s)	81, 131, 621, 1886, 2049, 2329
TscAI	CASTG	4 cut(s)	408, 1917, 1993, 2221
TseFI	GTSAC	5 cut(s)	113, 506, 893, 1256, 1300
TseI	GCWGC	9 cut(s)	72, 226, 560, 572, 1237, 1436, 1445, 1448, 1528
Tsp45I	GTSAC	5 cut(s)	113, 506, 893, 1256, 1300
TspDTI	ATGAA	3 cut(s)	1373, 2027, 2186
TspGWI	ACGGA	4 cut(s)	494, 732, 842, 1149
TspMI	CCCGGG	1 cut(s)	320
TspRI	CASTG	4 cut(s)	408, 1917, 1993, 2221
Van91I	CCANNNNNTGG	5 cut(s)	1180, 1655, 1668, 1912, 2161
Vha464I	CTTAAG	2 cut(s)	620, 1885
VneI	GTGCAC	2 cut(s)	1396, 1940
VpaK11BI	GGWCC	4 cut(s)	169, 187, 1856, 2152
XapI	RAATTY	2 cut(s)	1508, 2244
XbaI	TCTAGA	2 cut(s)	1580, 2281
XceI	RCATGY	4 cut(s)	95, 114, 636, 1335
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1094, 1798
XhoI	CTCGAG	1 cut(s)	2095
XmaI	CCCGGG	1 cut(s)	320
XmnI	GAANNNNTTC	1 cut(s)	500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.