pycom16g13320

beta-D-xylosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0012799
Physical Location & Seq
Forward (+)
9468074 .. 9472829
4756 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g13320.2

Sequence Viewer

Length: 2325 bp
ATGGCATGCAATATTGCCAAACTTTCACTTCTTTCTCTTCTGTTCTTATTTTCTTCCCTCTGCAGCATTGCAGTTGTGCATGCTCGTCCACCCTTCGCCTGCGACCCTCGAAACCCGATAACCAGAACGTTGAAGTTCTGCAGGGTGAGGGTGCCAATCCACGTTAGGGTTCAGGACTTGATCGGACGGCTGACATTGCAGGAGAAGATCGGGCTGTTGGTGAACAGTGCCATTGCTGTGCCTAGGCTTGGCATTCAGGGGTACGAGTGGTGGTCTGAGGCGCTTCATGGTGTGTCCAACGTGGGGCCTGGAACCAAGTTCGGTACCTTTCTTGGGGCTACTAGCTTCCCTCAAGTCATCACCACAGCTGCTTCCTTCAATGAATCGCTCTGGGAGGAAATCGGACGGGTTGTGTCTGATGAAGCAAGGGCAATGTACAACGGAGGCGCGGCTGGACTAACATTTTGGAGCCCAAATGTGAACATATTTCGTGACCCGAGGTGGGGAAGGGGGCAAGAGACTCCTGGGGAAGACCCTGTCTTGGCTGCCAAGTATGGTGCTAGGTATGTCAAGGGCCTCCAAGGTGATGGTGCTGGGAATCGCCTTAAGGTTGCTGCATGTTGCAAACATTACACTGCCTATGATCTCGATAACTGGAACGGTGTCGATCGCTTCCACTTCAATGCTAGGGTTAGTAAGCAGGACTTGGAAGACACATATAACGTGCCCTTCAAAGCCTGTGTGGTGGATGGGAATGTTGCTAGTGTTATGTGCTCCTACAACCAGGTCAACGGAAAGCCTACTTGTGCTGACCCTGATCTCCTCAAAGGCACAATCCGTGGTCAATGGAAACTCAATGGGTATATCGTCTCGGATTGTGATTCAGTTGGTGTTTATTATGATAACCAACATTACACCAAAACACCAGAAGCAGCAGCTGCATACGCAATTAAAGCAGGTTTGGATTTGGATTGTGGGCCATTCCTTGGCATCCACACAGAGGCAGCCATGAGGACTGGCCAGGTAAACGAGATCGACATTAACTATGCGTTGGCTAACACAATCACGGTCCAGATGAGATTGGGAATGTTTGATGGTGAACCGTCAACTCAACGATATGGAAACTTAGGCCTAGCAGATGTGTGCAAACCATCCAGCAATGAGCTAGCCCTTGAAGCTGCCAGACAAGGCATTGTTCTGCTTGAAAACCGTGGGAATTCGCTACCCCTCTCAACCATACGCCACCGTACTGTGGCAGTAATCGGGCCCAATTCTGATGTTACAGAAACAATGATTGGAAATTATGCTGGTATTGCATGTGGTTACACTACACCACTACAAGGAATAGCGAGGTACACAAGGACCATACACCAAGCTGGGTGCACAGATGTTCATTGCAATGGAAATCAACTAATTGGTGCTGCTGAGGTTGCAGCTAGACAAGCTGATGCAACCGTCTTAGTAATAGGCCTTGACCAATCAATTGAAGCAGAGTTCAGAGACCGGACTAACCTTCTCTTGCCCGGACACCAACAAGAGCTGGTGTCTAGGGTGGCCAGGGCTTCTAGGGGGCCGACCATTCTGGTCATAATGTCAGGCGGCCCTATTGATGTGACGTTCGCAAAGAATGACCCTCGCATTGGAGCGATTATTTGGGTTGGGTATCCAGGCCAGGCTGGAGGAACCGCCATTGCTGATGTTCTATTCGGCACTACAAACCCAAGTGGAAAGCTCCCTATGACATGGTACCCTCAAAATTATGTGGCCAACCTGCCAATGACAGACATGGCTATGAGAGCAGACCCAGCAAGAGGGTATCCTGGTAGGACCTATAGATTTTACAAGGGCCCAGTTGTGTTCCCATTTGGGCTGGGCCTAAGCTACACCAGATTCTCCCACTCCCTAGCCCAGGGGCCTACACTGGTCTCGGTCCCACTAACCAGCCTCGTCGCTGCCAAAAACACAACCATGCTAAGCAACCACGGCGTCCGAGTCAGCCACACAAACTGCGACTCACTCTCACTCGATGTCCACATTGACATCAAAAACACTGGAACCATGGATGGGACCCACACTCTTCTGGTGTTCGCGACCCAGCCGGCAGGAAAATGGGCCCCCAACAAGCAGCTGGTCGGATTTCACAAGGTCCATATCGTGGCCGGATCGGAGAGACGGGTCAGGGTTGGCGTCCACGTGTGCAAGCACCTCAGCGTTGTTGACAAATTGGGGATCTGGAGAATCCCATTGGGCCAACACAAACTGGAAATTGGTGACCTGAATCATTATGTTTCTATTGAAGCAAATTTAGGAGAGATTAAGTTTTAA

Protein Analysis

775

Amino Acids

83.98

Weight (kDa)

8.61

Isoelectric Point (pI)

28.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012799)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49360
fragaria_vesca FvH4_4g19350
malus_domestica MD13G1157400.v1.1 MD16G1158300.v1.1
prunus_persica Prupe.1G123100_v2.0.a1
pyrus_communis pycom16g13320
rosa_chinensis RchiOBHm_Chr4g0424381
rosa_laevigata RLG00000007479
rosa_multiflora Rmu_co8330357.1_g000001 Rmu_sc0003567.1_g000021 Rmu_sc0005995.1_g000003
rosa_roxburghii Rroxscaffold_5G00366330
rosa_rugosa Rorug04G0197100 Rorug04G0197200
rosa_samantha Rh4AG253200 Rh4CG269900 Rh4DG253000
rosa_wichuraiana Rw4G021850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 947, 1779
Acc65I GGTACC 2 cut(s) 323, 1746
AccB1I GGYRCC 3 cut(s) 151, 323, 1746
AccB7I CCANNNNNTGG 2 cut(s) 986, 2155
AccII CGCG 2 cut(s) 449, 2090
AciI CCGC 3 cut(s) 449, 1599, 1686
AclI AACGTT 1 cut(s) 128
AclWI GGATC 2 cut(s) 2170, 2237
AcoI YGGCCR 4 cut(s) 1018, 1554, 1764, 2157
AcsI RAATTY 2 cut(s) 1216, 2302
AcvI CACGTG 1 cut(s) 2194
AcyI GRCGYC 2 cut(s) 1986, 2187
AfaI GTAC 6 cut(s) 263, 325, 437, 1249, 1355, 1748
AflII CTTAAG 1 cut(s) 605
AflIII ACRYGT 1 cut(s) 2193
AgsI TTSAA 8 cut(s) 133, 379, 682, 733, 1175, 1205, 1487, 2297
AjnI CCWGG 9 cut(s) 307, 523, 783, 1020, 1556, 1666, 1671, 1819, 1908
AjuI GAANNNNNNNTTGG 2 cut(s) 1278, 1310
Alw21I GWGCWC 2 cut(s) 776, 1385
Alw26I GTCTC 5 cut(s) 512, 874, 1494, 1930, 2164
Alw44I GTGCAC 1 cut(s) 1381
AlwI GGATC 2 cut(s) 2170, 2237
AlwNI CAGNNNCTG 1 cut(s) 938
Ama87I CYCGRG 1 cut(s) 496
ApaI GGGCCC 3 cut(s) 1269, 1850, 2116
ApaLI GTGCAC 1 cut(s) 1381
ApoI RAATTY 2 cut(s) 1216, 2302
ArsI GACNNNNNNTTYG 2 cut(s) 447, 479
Asp718I GGTACC 2 cut(s) 323, 1746
AspA2I CCTAGG 1 cut(s) 242
AspLEI GCGC 2 cut(s) 283, 449
AsuC2I CCSGG 1 cut(s) 1524
AsuHPI GGTGA 6 cut(s) 157, 232, 352, 596, 1109, 2282
AsuNHI GCTAGC 1 cut(s) 1165
AvaI CYCGRG 1 cut(s) 496
AvaII GGWCC 6 cut(s) 1069, 1362, 1827, 1930, 2067, 2146
AvrII CCTAGG 1 cut(s) 242
BaeGI GKGCMC 5 cut(s) 729, 1269, 1385, 1850, 2116
BalI TGGCCA 3 cut(s) 1020, 1556, 1766
BanI GGYRCC 3 cut(s) 151, 323, 1746
BanII GRGCYC 4 cut(s) 473, 1269, 1850, 2116
BbrPI CACGTG 1 cut(s) 2194
BbsI GAAGAC 2 cut(s) 537, 717
Bbv12I GWGCWC 2 cut(s) 776, 1385
BbvCI CCTCAGC 2 cut(s) 1425, 2207
BccI CCATC 5 cut(s) 581, 743, 1088, 1159, 2057
BceAI ACGGC 2 cut(s) 203, 1999
BciT130I CCWGG 9 cut(s) 309, 525, 785, 1022, 1558, 1668, 1673, 1821, 1910
BciVI GTATCC 2 cut(s) 1674, 1827
BcnI CCSGG 1 cut(s) 1524
BcoDI GTCTC 5 cut(s) 512, 874, 1494, 1930, 2164
BfmI CTRYAG 3 cut(s) 61, 139, 1831
BfoI RGCGCY 1 cut(s) 284
BfrI CTTAAG 1 cut(s) 605
BfuAI ACCTGC 2 cut(s) 947, 1779
BfuI GTATCC 2 cut(s) 1674, 1827
BlnI CCTAGG 1 cut(s) 242
BlpI GCTNAGC 1 cut(s) 1973
Bme18I GGWCC 6 cut(s) 1069, 1362, 1827, 1930, 2067, 2146
BmeT110I CYCGRG 1 cut(s) 496
BmrI ACTGGG 1 cut(s) 1844
BmsI GCATC 2 cut(s) 999, 1438
BmtI GCTAGC 1 cut(s) 1169
BmuI ACTGGG 1 cut(s) 1844
BpiI GAAGAC 2 cut(s) 537, 717
BpmI CTGGAG 2 cut(s) 1698, 2254
Bpu10I CCTNAGC 3 cut(s) 1425, 1877, 2207
Bpu1102I GCTNAGC 1 cut(s) 1973
BpuEI CTTGAG 1 cut(s) 336
BpuMI CCSGG 1 cut(s) 1524
BsaAI YACGTR 1 cut(s) 2194
BsaHI GRCGYC 2 cut(s) 1986, 2187
BsaI GGTCTC 2 cut(s) 1494, 1930
BsaWI WCCGGW 1 cut(s) 1503
Bse118I RCCGGY 1 cut(s) 2098
Bse1I ACTGG 6 cut(s) 659, 1021, 1850, 1926, 2056, 2265
Bse3DI GCAATG 8 cut(s) 66, 194, 231, 438, 1165, 1393, 1405, 1689
BseBI CCWGG 9 cut(s) 309, 525, 785, 1022, 1558, 1668, 1673, 1821, 1910
BseGI GGATG 4 cut(s) 754, 990, 1151, 2068
BseMI GCAATG 8 cut(s) 66, 194, 231, 438, 1165, 1393, 1405, 1689
BseMII CTCAG 3 cut(s) 267, 1416, 2221
BseNI ACTGG 6 cut(s) 659, 1021, 1850, 1926, 2056, 2265
BseRI GAGGAG 1 cut(s) 812
BseSI GKGCMC 5 cut(s) 729, 1269, 1385, 1850, 2116
BseYI CCCAGC 5 cut(s) 593, 1376, 1804, 1870, 2094
Bsh1236I CGCG 2 cut(s) 449, 2090
Bsh1285I CGRYCG 1 cut(s) 670
BshNI GGYRCC 3 cut(s) 151, 323, 1746
BsiEI CGRYCG 1 cut(s) 670
BsiHKAI GWGCWC 2 cut(s) 776, 1385
BsiHKCI CYCGRG 1 cut(s) 496
BsiSI CCGG 4 cut(s) 1504, 1524, 2099, 2160
BslFI GGGAC 2 cut(s) 1916, 2080
BsmAI GTCTC 5 cut(s) 512, 874, 1494, 1930, 2164
BsmBI CGTCTC 2 cut(s) 874, 2164
BsmFI GGGAC 2 cut(s) 1916, 2080
BsmI GAATGC 1 cut(s) 252
Bso31I GGTCTC 2 cut(s) 1494, 1930
BsoBI CYCGRG 1 cut(s) 496
Bsp120I GGGCCC 3 cut(s) 1265, 1846, 2112
Bsp1286I GDGCHC 7 cut(s) 473, 729, 776, 1269, 1385, 1850, 2116
Bsp1407I TGTACA 1 cut(s) 435
Bsp143I GATC 8 cut(s) 180, 207, 643, 667, 817, 1032, 2162, 2229
Bsp1720I GCTNAGC 1 cut(s) 1973
Bsp19I CCATGG 1 cut(s) 2058
Bsp68I TCGCGA 1 cut(s) 2090
BspACI CCGC 3 cut(s) 449, 1599, 1686
BspCNI CTCAG 3 cut(s) 268, 1417, 2220
BspFNI CGCG 2 cut(s) 449, 2090
BspMAI CTGCAG 2 cut(s) 65, 143
BspMI ACCTGC 2 cut(s) 947, 1779
BspOI GCTAGC 1 cut(s) 1169
BspPI GGATC 2 cut(s) 2170, 2237
BspT107I GGYRCC 3 cut(s) 151, 323, 1746
BspTI CTTAAG 1 cut(s) 605
BspTNI GGTCTC 2 cut(s) 1494, 1930
BsrDI GCAATG 8 cut(s) 66, 194, 231, 438, 1165, 1393, 1405, 1689
BsrFI RCCGGY 1 cut(s) 2098
BsrGI TGTACA 1 cut(s) 435
BsrI ACTGG 6 cut(s) 659, 1021, 1850, 1926, 2056, 2265
BssAI RCCGGY 1 cut(s) 2098
BssMI GATC 8 cut(s) 180, 207, 643, 667, 817, 1032, 2162, 2229
BssNI GRCGYC 2 cut(s) 1986, 2187
BssT1I CCWWGG 4 cut(s) 242, 580, 985, 2058
Bst2UI CCWGG 9 cut(s) 309, 525, 785, 1022, 1558, 1668, 1673, 1821, 1910
Bst4CI ACNGT 8 cut(s) 227, 662, 1069, 1104, 1211, 1247, 1252, 1456
Bst6I CTCTTC 2 cut(s) 42, 2082
BstACI GRCGYC 2 cut(s) 1986, 2187
BstAFI CTTAAG 1 cut(s) 605
BstAPI GCANNNNNTGC 1 cut(s) 938
BstAUI TGTACA 1 cut(s) 435
BstBAI YACGTR 1 cut(s) 2194
BstC8I GCNNGC 6 cut(s) 7, 81, 100, 1167, 2100, 2201
BstDEI CTNAG 7 cut(s) 276, 1126, 1425, 1459, 1877, 1973, 2207
BstDSI CCRYGG 4 cut(s) 838, 1210, 1981, 2058
BstEII GGTNACC 1 cut(s) 2270
BstENI CCTNNNNNAGG 1 cut(s) 1907
BstF5I GGATG 4 cut(s) 754, 990, 1151, 2068
BstFNI CGCG 2 cut(s) 449, 2090
BstH2I RGCGCY 1 cut(s) 284
BstHHI GCGC 2 cut(s) 283, 449
BstKTI GATC 8 cut(s) 183, 210, 646, 670, 820, 1035, 2165, 2232
BstMAI GTCTC 5 cut(s) 512, 874, 1494, 1930, 2164
BstMBI GATC 8 cut(s) 180, 207, 643, 667, 817, 1032, 2162, 2229
BstMCI CGRYCG 1 cut(s) 670
BstNI CCWGG 9 cut(s) 309, 525, 785, 1022, 1558, 1668, 1673, 1821, 1910
BstNSI RCATGY 4 cut(s) 9, 83, 621, 1320
BstPI GGTNACC 1 cut(s) 2270
BstSFI CTRYAG 3 cut(s) 61, 139, 1831
BstSLI GKGCMC 5 cut(s) 729, 1269, 1385, 1850, 2116
BstUI CGCG 2 cut(s) 449, 2090
BstV2I GAAGAC 2 cut(s) 537, 717
BstX2I RGATCY 1 cut(s) 2229
BstXI CCANNNNNNTGG 1 cut(s) 587
BstYI RGATCY 1 cut(s) 2229
BsuI GTATCC 2 cut(s) 1674, 1827
BtgI CCRYGG 4 cut(s) 838, 1210, 1981, 2058
BtsCI GGATG 4 cut(s) 754, 990, 1151, 2068
BtsI GCAGTG 1 cut(s) 633
BtsIMutI CAGTG 4 cut(s) 232, 633, 1919, 2049
BtuMI TCGCGA 1 cut(s) 2090
BveI ACCTGC 2 cut(s) 947, 1779
Cac8I GCNNGC 6 cut(s) 7, 81, 100, 1167, 2100, 2201
CaiI CAGNNNCTG 1 cut(s) 938
CfoI GCGC 2 cut(s) 283, 449
Cfr10I RCCGGY 1 cut(s) 2098
CseI GACGC 2 cut(s) 1975, 2176
CsiI ACCWGGT 1 cut(s) 783
Csp6I GTAC 6 cut(s) 262, 324, 436, 1248, 1354, 1747
CviQI GTAC 6 cut(s) 262, 324, 436, 1248, 1354, 1747
DdeI CTNAG 7 cut(s) 276, 1126, 1425, 1459, 1877, 1973, 2207
DpnI GATC 8 cut(s) 182, 209, 645, 669, 819, 1034, 2164, 2231
DpnII GATC 8 cut(s) 180, 207, 643, 667, 817, 1032, 2162, 2229
EaeI YGGCCR 4 cut(s) 1018, 1554, 1764, 2157
Eam1104I CTCTTC 2 cut(s) 42, 2082
EarI CTCTTC 2 cut(s) 42, 2082
Eco130I CCWWGG 4 cut(s) 242, 580, 985, 2058
Eco147I AGGCCT 2 cut(s) 1131, 1470
Eco24I GRGCYC 4 cut(s) 473, 1269, 1850, 2116
Eco31I GGTCTC 2 cut(s) 1494, 1930
Eco47I GGWCC 6 cut(s) 1069, 1362, 1827, 1930, 2067, 2146
Eco72I CACGTG 1 cut(s) 2194
Eco88I CYCGRG 1 cut(s) 496
Eco91I GGTNACC 1 cut(s) 2270
EcoNI CCTNNNNNAGG 1 cut(s) 1907
EcoO109I RGGNCCY 7 cut(s) 305, 574, 1827, 1846, 1913, 2067, 2113
EcoO65I GGTNACC 1 cut(s) 2270
EcoRI GAATTC 1 cut(s) 1216
EcoRII CCWGG 9 cut(s) 307, 523, 783, 1020, 1556, 1666, 1671, 1819, 1908
EcoT14I CCWWGG 4 cut(s) 242, 580, 985, 2058
EcoT38I GRGCYC 4 cut(s) 473, 1269, 1850, 2116
ErhI CCWWGG 4 cut(s) 242, 580, 985, 2058
Esp3I CGTCTC 2 cut(s) 874, 2164
FalI AAGNNNNNCTT 2 cut(s) 689, 721
FaqI GGGAC 2 cut(s) 1916, 2080
FokI GGATG 4 cut(s) 761, 977, 1138, 2075
FriOI GRGCYC 4 cut(s) 473, 1269, 1850, 2116
GlaI GCGC 2 cut(s) 282, 448
GsaI CCCAGC 5 cut(s) 597, 1380, 1808, 1874, 2098
GsuI CTGGAG 2 cut(s) 1698, 2254
HaeII RGCGCY 1 cut(s) 284
HapII CCGG 4 cut(s) 1504, 1524, 2099, 2160
HgaI GACGC 2 cut(s) 1975, 2176
HhaI GCGC 2 cut(s) 283, 449
Hin1I GRCGYC 2 cut(s) 1986, 2187
Hin6I GCGC 2 cut(s) 281, 447
HinP1I GCGC 2 cut(s) 281, 447
HincII GTYRAC 3 cut(s) 790, 1107, 2218
HindII GTYRAC 3 cut(s) 790, 1107, 2218
HinfI GANTC 9 cut(s) 383, 520, 598, 881, 1890, 1992, 2012, 2238, 2278
HpaII CCGG 4 cut(s) 1504, 1524, 2099, 2160
HphI GGTGA 6 cut(s) 157, 232, 352, 596, 1109, 2282
Hpy188III TCNNGA 6 cut(s) 173, 491, 647, 1072, 2089, 2233
Hpy99I CGWCG 1 cut(s) 1952
HpyAV CCTTC 5 cut(s) 103, 385, 501, 739, 1523
HpyCH4III ACNGT 8 cut(s) 227, 662, 1069, 1104, 1211, 1247, 1252, 1456
HpyCH4IV ACGT 6 cut(s) 128, 162, 300, 723, 1616, 2193
HpyF3I CTNAG 7 cut(s) 276, 1126, 1425, 1459, 1877, 1973, 2207
HpySE526I ACGT 6 cut(s) 128, 162, 300, 723, 1616, 2193
Hsp92I GRCGYC 2 cut(s) 1986, 2187
HspAI GCGC 2 cut(s) 281, 447
KflI GGGWCCC 1 cut(s) 2067
KpnI GGTACC 2 cut(s) 327, 1750
KroI GCCGGC 1 cut(s) 2098
KroNI GCCGGC 1 cut(s) 2100
Kzo9I GATC 8 cut(s) 180, 207, 643, 667, 817, 1032, 2162, 2229
LmnI GCTCC 4 cut(s) 468, 779, 1643, 1737
LweI GCATC 2 cut(s) 999, 1438
MabI ACCWGGT 1 cut(s) 783
MaeII ACGT 6 cut(s) 128, 162, 300, 723, 1616, 2193
MaeIII GTNAC 5 cut(s) 491, 1279, 1322, 1612, 2270
MalI GATC 8 cut(s) 182, 209, 645, 669, 819, 1034, 2164, 2231
MboI GATC 8 cut(s) 180, 207, 643, 667, 817, 1032, 2162, 2229
MboII GAAGA 6 cut(s) 29, 45, 217, 542, 722, 2069
MfeI CAATTG 1 cut(s) 1482
MflI RGATCY 1 cut(s) 2229
MhlI GDGCHC 7 cut(s) 473, 729, 776, 1269, 1385, 1850, 2116
MlsI TGGCCA 3 cut(s) 1020, 1556, 1766
MluNI TGGCCA 3 cut(s) 1020, 1556, 1766
MlyI GAGTC 3 cut(s) 514, 2001, 2006
MmeI TCCRAC 2 cut(s) 321, 2113
Mox20I TGGCCA 3 cut(s) 1020, 1556, 1766
MroNI GCCGGC 1 cut(s) 2098
MscI TGGCCA 3 cut(s) 1020, 1556, 1766
MseI TTAA 5 cut(s) 606, 951, 1041, 2316, 2323
MslI CAYNNNNRTG 5 cut(s) 236, 681, 1398, 1790, 1967
Msp20I TGGCCA 3 cut(s) 1020, 1556, 1766
MspA1I CMGCKG 3 cut(s) 368, 938, 2128
MspCI CTTAAG 1 cut(s) 605
MspI CCGG 4 cut(s) 1504, 1524, 2099, 2160
MunI CAATTG 1 cut(s) 1482
Mva1269I GAATGC 1 cut(s) 252
MvaI CCWGG 9 cut(s) 309, 525, 785, 1022, 1558, 1668, 1673, 1821, 1910
MvnI CGCG 2 cut(s) 449, 2090
NaeI GCCGGC 1 cut(s) 2100
NciI CCSGG 1 cut(s) 1524
NcoI CCATGG 1 cut(s) 2058
NdeII GATC 8 cut(s) 180, 207, 643, 667, 817, 1032, 2162, 2229
NgoMIV GCCGGC 1 cut(s) 2098
NheI GCTAGC 1 cut(s) 1165
NmuCI GTSAC 3 cut(s) 491, 1612, 2270
NruI TCGCGA 1 cut(s) 2090
NspI RCATGY 4 cut(s) 9, 83, 621, 1320
PaeI GCATGC 2 cut(s) 9, 83
PasI CCCWGGG 1 cut(s) 1909
PceI AGGCCT 2 cut(s) 1131, 1470
PctI GAATGC 1 cut(s) 252
PdiI GCCGGC 1 cut(s) 2100
PfeI GAWTC 6 cut(s) 383, 598, 881, 1890, 2238, 2278
PflFI GACNNNGTC 1 cut(s) 536
PflMI CCANNNNNTGG 2 cut(s) 986, 2155
Ple19I CGATCG 1 cut(s) 670
PleI GAGTC 3 cut(s) 514, 2000, 2006
PmaCI CACGTG 1 cut(s) 2194
PmlI CACGTG 1 cut(s) 2194
PpsI GAGTC 3 cut(s) 514, 2000, 2006
Ppu21I YACGTR 1 cut(s) 2194
PpuMI RGGWCCY 2 cut(s) 1827, 2067
Psp1406I AACGTT 1 cut(s) 128
Psp5II RGGWCCY 2 cut(s) 1827, 2067
Psp6I CCWGG 9 cut(s) 307, 523, 783, 1020, 1556, 1666, 1671, 1819, 1908
PspCI CACGTG 1 cut(s) 2194
PspEI GGTNACC 1 cut(s) 2270
PspFI CCCAGC 5 cut(s) 593, 1376, 1804, 1870, 2094
PspGI CCWGG 9 cut(s) 307, 523, 783, 1020, 1556, 1666, 1671, 1819, 1908
PspOMI GGGCCC 3 cut(s) 1265, 1846, 2112
PspPPI RGGWCCY 2 cut(s) 1827, 2067
PstI CTGCAG 2 cut(s) 65, 143
PstNI CAGNNNCTG 1 cut(s) 938
PsuI RGATCY 1 cut(s) 2229
PsyI GACNNNGTC 1 cut(s) 536
PvuI CGATCG 1 cut(s) 670
PvuII CAGCTG 3 cut(s) 368, 938, 2128
RruI TCGCGA 1 cut(s) 2090
RsaI GTAC 6 cut(s) 263, 325, 437, 1249, 1355, 1748
RsaNI GTAC 6 cut(s) 262, 324, 436, 1248, 1354, 1747
RseI CAYNNNNRTG 5 cut(s) 236, 681, 1398, 1790, 1967
SaqAI TTAA 5 cut(s) 606, 951, 1041, 2316, 2323
Sau3AI GATC 8 cut(s) 180, 207, 643, 667, 817, 1032, 2162, 2229
SchI GAGTC 3 cut(s) 514, 2001, 2006
SduI GDGCHC 7 cut(s) 473, 729, 776, 1269, 1385, 1850, 2116
SexAI ACCWGGT 1 cut(s) 783
SfaNI GCATC 2 cut(s) 999, 1438
SfcI CTRYAG 3 cut(s) 61, 139, 1831
SinI GGWCC 6 cut(s) 1069, 1362, 1827, 1930, 2067, 2146
SmiMI CAYNNNNRTG 5 cut(s) 236, 681, 1398, 1790, 1967
SmlI CTYRAG 2 cut(s) 351, 605
SmoI CTYRAG 2 cut(s) 351, 605
SphI GCATGC 2 cut(s) 9, 83
SseBI AGGCCT 2 cut(s) 1131, 1470
SsiI CCGC 3 cut(s) 449, 1599, 1686
SspI AATATT 1 cut(s) 13
StuI AGGCCT 2 cut(s) 1131, 1470
StyI CCWWGG 4 cut(s) 242, 580, 985, 2058
TaaI ACNGT 8 cut(s) 227, 662, 1069, 1104, 1211, 1247, 1252, 1456
TaiI ACGT 6 cut(s) 131, 165, 303, 726, 1619, 2196
TaqI TCGA 5 cut(s) 109, 648, 666, 1035, 2025
TaqII GACCGA 1 cut(s) 1918
TatI WGTACW 1 cut(s) 435
TauI GCSGC 2 cut(s) 452, 1602
TfiI GAWTC 6 cut(s) 383, 598, 881, 1890, 2238, 2278
Tru1I TTAA 5 cut(s) 606, 951, 1041, 2316, 2323
Tru9I TTAA 5 cut(s) 606, 951, 1041, 2316, 2323
TscAI CASTG 4 cut(s) 232, 640, 1926, 2056
TseFI GTSAC 3 cut(s) 491, 1612, 2270
Tsp45I GTSAC 3 cut(s) 491, 1612, 2270
TspDTI ATGAA 4 cut(s) 275, 396, 435, 1382
TspGWI ACGGA 3 cut(s) 456, 807, 827
TspRI CASTG 4 cut(s) 232, 640, 1926, 2056
Tth111I GACNNNGTC 1 cut(s) 536
Van91I CCANNNNNTGG 2 cut(s) 986, 2155
Vha464I CTTAAG 1 cut(s) 605
VneI GTGCAC 1 cut(s) 1381
VpaK11BI GGWCC 6 cut(s) 1069, 1362, 1827, 1930, 2067, 2146
XagI CCTNNNNNAGG 1 cut(s) 1907
XapI RAATTY 2 cut(s) 1216, 2302
XceI RCATGY 4 cut(s) 9, 83, 621, 1320
XcmI CCANNNNNNNNNTGG 1 cut(s) 2125
XmaJI CCTAGG 1 cut(s) 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.