Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013241

Physical Location & Seq

Genomic Coordinates Reverse (-)

11141875 .. 11143289

Gene Structure 1415 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G141800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGTCACTGTGCTTCTCCTCCATTGTATTCAGTCTTCATTCAGCAAAGAACCAAAGCTTCTTAACACGTTTCTCTTCCCAGTTCACCAACCAAGCTAAGGTAAGCTCTGTTCCTTATGGTTCCCCATCTTCTTCTTTAAACTTATCTGAAATTTTCAAGTTTAGCAAAGAAAGAACAAAACCCATTTCAGCTTCAGCGACGCCAACTGCTGAAACCGCCTCTCCACCTTCATTCAGAGGCAAAAACCCAAAAGATATCAACATTTTGGTGGTGGGTGCAACTGGGTACATTGGAAAATTTGTGGTTAAGGAGTTAGTTAATAGAGAGTTCAATGTTATAGCCGTTGCTAGGGAGAAGAGTGGAATTAGAGGTAAGGTTAGCAAGGATGAGACTTTGAATCAGTTGAAAGGAGCCAATGTGTGCTTTTCAGATGTTACCCATTTGGATACTTTGGAGAAATCTTTGGAAAACTTTGGGGTTTCAATTGATGTTGTTGTTTCATGCCTTGCTAGCCGTTCTGGTGGTGTAAAGGACTCTTGGAAGATAGACTATGAGGCAACAAAGAATAGTCTTGTTGCCGGTAGGAGACGTGGGGCTTCACATTTTGTATTGCTTTCTGCAATTTGTGTGCAGAAGCCCCTTCTTGAGTTCCAGCGTGCAAAGCTGAAATTCGAGTCCGAGTTGATCAGAGAAGCTGAAGAGGACAATGGGTTCACTTACAGTATTGTGAGGCCAACTGCATTCTTTAAGAGCTTGGGTGGCCAGGTTGAGTTGGTGAAAGATGGAAAGCCTTATGTGATGTTTGGGGATGGAAAGTTGTGTGCTTGCAAGCCAATTAGTGAGGCGGATTTGGCTTCGTTTATTTCGGATTGTGCGTTGAGTGAAAACAAAATTAACCAGGTTTTGCCTATTGGCGGACCCGGGAAGGCCTTGACACCATTGGAGCAGGGGGAGTTGCTGTTTAGACTTGTGGGGAGGGAACCCAAGTTCTTGAAAGTGCCCATCGAAATAATGGACTTCGCTATCGGGGTTCTCGATTTCCTCGTAAAGATCTTTCCTTCAATGGAAGATACTGCTGAATTTGGGAAGATTGGGAGGTATTATGCAGCTGAGAGTATGTTGGTTTTGGATCCTGAGACTGGAGAATATAATGCTGAGAAAACACCAAGCTATGGTAAAGACACATTGGAAGAATTCTTTGAGACTGTGCTGAGGGAGGGAATGGCTGGACAGGAATTAGGGGAACAGACAATTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009526 GO:0009534 GO:0009536 GO:0009579 GO:0009941 GO:0009987 GO:0015994 GO:0015995 GO:0016020 GO:0016491 GO:0018130 GO:0019438 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0033013 GO:0033014 GO:0034641 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0051744 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 map00860 map01100 map01110

Pfam Domains

Protein Families

NAD_binding_10

Protein Analysis

420

Amino Acids

45.94

Weight (kDa)

6.12

Isoelectric Point (pI)

27.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013241)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18660
fragaria_vesca	FvH4_4g17240
malus_domestica	MD13G1173600.v1.1
prunus_persica	Prupe.1G141800_v2.0.a1
pyrus_communis	pycom16g14670
rosa_chinensis	RchiOBHm_Chr4g0421151
rosa_laevigata	RLG00000007711
rosa_multiflora	Rmu_co8498633.1_g000001 Rmu_sc0009290.1_g000003
rosa_roxburghii	Rroxscaffold_5G00363440
rosa_rugosa	Rorug04G0170000 Rorug04G0170100 Rorug04G0170200
rosa_samantha	Rh4AG229600 Rh4BG232300 Rh4CG243900 Rh4DG228000
rosa_wichuraiana	Rw4G020420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1172
AciI	CCGC	3 cut(s)	216, 845, 915
AclWI	GGATC	2 cut(s)	1124, 1137
AcoI	YGGCCR	1 cut(s)	760
AcsI	RAATTY	5 cut(s)	150, 296, 668, 1079, 1193
AcuI	CTGAAG	2 cut(s)	177, 717
AcyI	GRCGYC	1 cut(s)	200
AfaI	GTAC	1 cut(s)	287
AfiI	CCNNNNNNNGG	5 cut(s)	97, 348, 914, 1139, 1172
AflIII	ACRYGT	1 cut(s)	65
AgsI	TTSAA	7 cut(s)	157, 331, 397, 406, 483, 994, 1062
AjiI	CACGTC	1 cut(s)	590
AjnI	CCWGG	2 cut(s)	762, 897
AloI	GAACNNNNNNTCC	4 cut(s)	695, 727, 971, 1003
AluBI	AGCT	9 cut(s)	57, 95, 105, 191, 664, 695, 753, 1109, 1170
AluI	AGCT	9 cut(s)	57, 95, 105, 191, 664, 695, 753, 1109, 1170
Alw26I	GTCTC	4 cut(s)	383, 580, 1130, 1196
AlwI	GGATC	2 cut(s)	1124, 1137
Ama87I	CYCGRG	1 cut(s)	920
AoxI	GGCC	3 cut(s)	731, 760, 927
ApeKI	GCWGC	1 cut(s)	1106
ApoI	RAATTY	5 cut(s)	150, 296, 668, 1079, 1193
AspS9I	GGNCC	1 cut(s)	917
AsuC2I	CCSGG	2 cut(s)	921, 922
AsuHPI	GGTGA	2 cut(s)	76, 787
AsuNHI	GCTAGC	1 cut(s)	509
AvaI	CYCGRG	1 cut(s)	920
AvaII	GGWCC	1 cut(s)	917
BaeGI	GKGCMC	1 cut(s)	1002
BalI	TGGCCA	1 cut(s)	762
BamHI	GGATCC	1 cut(s)	1129
BarI	GAAGNNNNNNTAC	2 cut(s)	18, 50
BbsI	GAAGAC	1 cut(s)	26
BbvCI	CCTCAGC	1 cut(s)	1211
BbvI	GCAGC	1 cut(s)	1118
BccI	CCATC	4 cut(s)	133, 776, 803, 1010
BceAI	ACGGC	2 cut(s)	326, 498
BciT130I	CCWGG	2 cut(s)	764, 899
BciVI	GTATCC	1 cut(s)	439
BclI	TGATCA	1 cut(s)	684
BcnI	CCSGG	2 cut(s)	921, 922
BcoDI	GTCTC	4 cut(s)	383, 580, 1130, 1196
BfaI	CTAG	2 cut(s)	348, 510
BfuI	GTATCC	1 cut(s)	439
BglII	AGATCT	1 cut(s)	1050
BisI	GCNGC	1 cut(s)	1107
BlsI	GCNGC	1 cut(s)	1108
Bme1390I	CCNGG	4 cut(s)	764, 899, 921, 922
Bme18I	GGWCC	1 cut(s)	917
BmeT110I	CYCGRG	1 cut(s)	920
BmgBI	CACGTC	1 cut(s)	590
BmgT120I	GGNCC	1 cut(s)	917
BmiI	GGNNCC	5 cut(s)	121, 412, 919, 981, 1131
BmrFI	CCNGG	4 cut(s)	764, 899, 921, 922
BmrI	ACTGGG	2 cut(s)	73, 291
BmtI	GCTAGC	1 cut(s)	513
BmuI	ACTGGG	2 cut(s)	73, 291
BpiI	GAAGAC	1 cut(s)	26
BpmI	CTGGAG	1 cut(s)	1161
Bpu10I	CCTNAGC	2 cut(s)	96, 1211
BpuEI	CTTGAG	1 cut(s)	665
BpuMI	CCSGG	2 cut(s)	921, 922
BsaHI	GRCGYC	1 cut(s)	200
BsaJI	CCNNGG	1 cut(s)	920
BsaXI	ACNNNNNCTCC	6 cut(s)	205, 235, 402, 432, 944, 974
Bsc4I	CCNNNNNNNGG	5 cut(s)	97, 348, 914, 1139, 1172
Bse118I	RCCGGY	1 cut(s)	578
Bse1I	ACTGG	3 cut(s)	79, 286, 1144
BseBI	CCWGG	2 cut(s)	764, 899
BseDI	CCNNGG	1 cut(s)	920
BseGI	GGATG	2 cut(s)	391, 814
BseLI	CCNNNNNNNGG	5 cut(s)	97, 348, 914, 1139, 1172
BseMII	CTCAG	4 cut(s)	1101, 1125, 1146, 1202
BseNI	ACTGG	3 cut(s)	79, 286, 1144
BseRI	GAGGAG	1 cut(s)	7
BseSI	GKGCMC	1 cut(s)	1002
BseXI	GCAGC	1 cut(s)	1118
BsgI	GTGCAG	1 cut(s)	650
BshFI	GGCC	3 cut(s)	733, 762, 929
BsiHKCI	CYCGRG	1 cut(s)	920
BsiSI	CCGG	2 cut(s)	579, 921
BslI	CCNNNNNNNGG	5 cut(s)	97, 348, 914, 1139, 1172
BsmAI	GTCTC	4 cut(s)	383, 580, 1130, 1196
BsmBI	CGTCTC	1 cut(s)	580
BsmI	GAATGC	1 cut(s)	740
BsnI	GGCC	3 cut(s)	733, 762, 929
BsoBI	CYCGRG	1 cut(s)	920
Bsp1286I	GDGCHC	1 cut(s)	1002
Bsp143I	GATC	3 cut(s)	684, 1050, 1129
BspACI	CCGC	3 cut(s)	216, 845, 915
BspANI	GGCC	3 cut(s)	733, 762, 929
BspCNI	CTCAG	4 cut(s)	1102, 1126, 1147, 1203
BspLI	GGNNCC	5 cut(s)	121, 412, 919, 981, 1131
BspOI	GCTAGC	1 cut(s)	513
BspPI	GGATC	2 cut(s)	1124, 1137
BsrFI	RCCGGY	1 cut(s)	578
BsrI	ACTGG	3 cut(s)	79, 286, 1144
BssAI	RCCGGY	1 cut(s)	578
BssECI	CCNNGG	1 cut(s)	920
BssMI	GATC	3 cut(s)	684, 1050, 1129
BssNI	GRCGYC	1 cut(s)	200
Bst2UI	CCWGG	2 cut(s)	764, 899
Bst4CI	ACNGT	3 cut(s)	9, 722, 1207
Bst6I	CTCTTC	3 cut(s)	79, 350, 693
BstACI	GRCGYC	1 cut(s)	200
BstC8I	GCNNGC	4 cut(s)	511, 657, 826, 830
BstDEI	CTNAG	5 cut(s)	96, 1110, 1134, 1155, 1211
BstF5I	GGATG	2 cut(s)	391, 814
BstKTI	GATC	3 cut(s)	687, 1053, 1132
BstMAI	GTCTC	4 cut(s)	383, 580, 1130, 1196
BstMBI	GATC	3 cut(s)	684, 1050, 1129
BstMWI	GCNNNNNNNGC	5 cut(s)	215, 510, 661, 759, 851
BstNI	CCWGG	2 cut(s)	764, 899
BstSCI	CCNGG	4 cut(s)	762, 897, 919, 920
BstSLI	GKGCMC	1 cut(s)	1002
BstV1I	GCAGC	1 cut(s)	1118
BstV2I	GAAGAC	1 cut(s)	26
BstX2I	RGATCY	2 cut(s)	1050, 1129
BstYI	RGATCY	2 cut(s)	1050, 1129
BsuI	GTATCC	1 cut(s)	439
BsuRI	GGCC	3 cut(s)	733, 762, 929
BtrI	CACGTC	1 cut(s)	590
BtsCI	GGATG	2 cut(s)	391, 814
BtsIMutI	CAGTG	1 cut(s)	5
Cac8I	GCNNGC	4 cut(s)	511, 657, 826, 830
Cfr10I	RCCGGY	1 cut(s)	578
Cfr13I	GGNCC	1 cut(s)	917
Cfr9I	CCCGGG	1 cut(s)	920
CseI	GACGC	1 cut(s)	208
CsiI	ACCWGGT	1 cut(s)	897
Csp6I	GTAC	1 cut(s)	286
CviAII	CATG	1 cut(s)	501
CviQI	GTAC	1 cut(s)	286
DdeI	CTNAG	5 cut(s)	96, 1110, 1134, 1155, 1211
DpnI	GATC	3 cut(s)	686, 1052, 1131
DpnII	GATC	3 cut(s)	684, 1050, 1129
DraI	TTTAAA	1 cut(s)	138
EaeI	YGGCCR	1 cut(s)	760
Eam1104I	CTCTTC	3 cut(s)	79, 350, 693
EarI	CTCTTC	3 cut(s)	79, 350, 693
EciI	GGCGGA	2 cut(s)	860, 930
Eco147I	AGGCCT	1 cut(s)	929
Eco32I	GATATC	1 cut(s)	256
Eco47I	GGWCC	1 cut(s)	917
Eco57I	CTGAAG	2 cut(s)	177, 717
Eco88I	CYCGRG	1 cut(s)	920
EcoRI	GAATTC	1 cut(s)	1193
EcoRII	CCWGG	2 cut(s)	762, 897
EcoRV	GATATC	1 cut(s)	256
Esp3I	CGTCTC	1 cut(s)	580
FaeI	CATG	1 cut(s)	504
FaiI	YATR	9 cut(s)	117, 338, 502, 552, 795, 1104, 1118, 1149, 1173
FatI	CATG	1 cut(s)	500
FbaI	TGATCA	1 cut(s)	684
Fnu4HI	GCNGC	1 cut(s)	1107
FokI	GGATG	2 cut(s)	398, 821
Fsp4HI	GCNGC	1 cut(s)	1107
FspBI	CTAG	2 cut(s)	348, 510
GluI	GCNGC	1 cut(s)	1107
GsuI	CTGGAG	1 cut(s)	1161
HaeIII	GGCC	3 cut(s)	733, 762, 929
HapII	CCGG	2 cut(s)	579, 921
HgaI	GACGC	1 cut(s)	208
Hin1I	GRCGYC	1 cut(s)	200
Hin1II	CATG	1 cut(s)	504
HindIII	AAGCTT	1 cut(s)	55
HinfI	GANTC	3 cut(s)	397, 533, 674
HpaII	CCGG	2 cut(s)	579, 921
HphI	GGTGA	2 cut(s)	76, 787
Hpy166II	GTNNAC	2 cut(s)	84, 714
Hpy188I	TCNGA	6 cut(s)	148, 236, 430, 679, 689, 868
Hpy188III	TCNNGA	4 cut(s)	644, 991, 1034, 1133
Hpy8I	GTNNAC	2 cut(s)	84, 714
Hpy99I	CGWCG	1 cut(s)	202
HpyAV	CCTTC	4 cut(s)	237, 650, 919, 1068
HpyCH4III	ACNGT	3 cut(s)	9, 722, 1207
HpyCH4IV	ACGT	2 cut(s)	67, 589
HpyCH4V	TGCA	7 cut(s)	278, 620, 631, 659, 740, 828, 1106
HpyF10VI	GCNNNNNNNGC	5 cut(s)	215, 510, 661, 759, 851
HpyF3I	CTNAG	5 cut(s)	96, 1110, 1134, 1155, 1211
HpySE526I	ACGT	2 cut(s)	67, 589
Hsp92I	GRCGYC	1 cut(s)	200
Hsp92II	CATG	1 cut(s)	504
Ksp22I	TGATCA	1 cut(s)	684
Kzo9I	GATC	3 cut(s)	684, 1050, 1129
LmnI	GCTCC	2 cut(s)	410, 943
Lsp1109I	GCAGC	1 cut(s)	1118
MabI	ACCWGGT	1 cut(s)	897
MaeI	CTAG	2 cut(s)	348, 510
MaeII	ACGT	2 cut(s)	67, 589
MaeIII	GTNAC	2 cut(s)	3, 433
MalI	GATC	3 cut(s)	686, 1052, 1131
MboI	GATC	3 cut(s)	684, 1050, 1129
MfeI	CAATTG	1 cut(s)	483
MflI	RGATCY	2 cut(s)	1050, 1129
MhlI	GDGCHC	1 cut(s)	1002
MlsI	TGGCCA	1 cut(s)	762
MluNI	TGGCCA	1 cut(s)	762
MlyI	GAGTC	2 cut(s)	527, 683
Mox20I	TGGCCA	1 cut(s)	762
MscI	TGGCCA	1 cut(s)	762
MseI	TTAA	6 cut(s)	62, 137, 306, 318, 747, 894
MslI	CAYNNNNRTG	1 cut(s)	266
Msp20I	TGGCCA	1 cut(s)	762
MspA1I	CMGCKG	1 cut(s)	1109
MspI	CCGG	2 cut(s)	579, 921
MspR9I	CCNGG	4 cut(s)	764, 899, 921, 922
MunI	CAATTG	1 cut(s)	483
Mva1269I	GAATGC	1 cut(s)	740
MvaI	CCWGG	2 cut(s)	764, 899
MwoI	GCNNNNNNNGC	5 cut(s)	215, 510, 661, 759, 851
NciI	CCSGG	2 cut(s)	921, 922
NdeII	GATC	3 cut(s)	684, 1050, 1129
NheI	GCTAGC	1 cut(s)	509
NlaIII	CATG	1 cut(s)	504
NlaIV	GGNNCC	5 cut(s)	121, 412, 919, 981, 1131
NmuCI	GTSAC	1 cut(s)	3
PceI	AGGCCT	1 cut(s)	929
PcsI	WCGNNNNNNNCGW	3 cut(s)	872, 1032, 1041
PctI	GAATGC	1 cut(s)	740
PfeI	GAWTC	1 cut(s)	397
PflMI	CCANNNNNTGG	1 cut(s)	1172
PkrI	GCNGC	1 cut(s)	1108
PleI	GAGTC	2 cut(s)	527, 682
PpsI	GAGTC	2 cut(s)	527, 682
Psp6I	CCWGG	2 cut(s)	762, 897
PspGI	CCWGG	2 cut(s)	762, 897
PspN4I	GGNNCC	5 cut(s)	121, 412, 919, 981, 1131
PspPI	GGNCC	1 cut(s)	917
PsrI	GAACNNNNNNTAC	2 cut(s)	93, 125
PsuI	RGATCY	2 cut(s)	1050, 1129
PvuII	CAGCTG	1 cut(s)	1109
RsaI	GTAC	1 cut(s)	287
RsaNI	GTAC	1 cut(s)	286
RseI	CAYNNNNRTG	1 cut(s)	266
SaqAI	TTAA	6 cut(s)	62, 137, 306, 318, 747, 894
SatI	GCNGC	1 cut(s)	1107
Sau3AI	GATC	3 cut(s)	684, 1050, 1129
Sau96I	GGNCC	1 cut(s)	917
SchI	GAGTC	2 cut(s)	527, 683
ScrFI	CCNGG	4 cut(s)	764, 899, 921, 922
SduI	GDGCHC	1 cut(s)	1002
SexAI	ACCWGGT	1 cut(s)	897
SinI	GGWCC	1 cut(s)	917
SmaI	CCCGGG	1 cut(s)	922
SmiMI	CAYNNNNRTG	1 cut(s)	266
SmlI	CTYRAG	1 cut(s)	644
SmoI	CTYRAG	1 cut(s)	644
SseBI	AGGCCT	1 cut(s)	929
SsiI	CCGC	3 cut(s)	216, 845, 915
SspMI	CTAG	2 cut(s)	348, 510
StuI	AGGCCT	1 cut(s)	929
StyD4I	CCNGG	4 cut(s)	762, 897, 919, 920
TaaI	ACNGT	3 cut(s)	9, 722, 1207
TaiI	ACGT	2 cut(s)	70, 592
TaqI	TCGA	3 cut(s)	672, 1005, 1035
TfiI	GAWTC	1 cut(s)	397
Tru1I	TTAA	6 cut(s)	62, 137, 306, 318, 747, 894
Tru9I	TTAA	6 cut(s)	62, 137, 306, 318, 747, 894
TscAI	CASTG	1 cut(s)	12
TseFI	GTSAC	1 cut(s)	3
TseI	GCWGC	1 cut(s)	1106
Tsp45I	GTSAC	1 cut(s)	3
TspDTI	ATGAA	3 cut(s)	26, 219, 489
TspMI	CCCGGG	1 cut(s)	920
TspRI	CASTG	1 cut(s)	12
Van91I	CCANNNNNTGG	1 cut(s)	1172
VpaK11BI	GGWCC	1 cut(s)	917
XapI	RAATTY	5 cut(s)	150, 296, 668, 1079, 1193
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1009
XmaI	CCCGGG	1 cut(s)	920
XspI	CTAG	2 cut(s)	348, 510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.