Heat Stress Transcription Factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G13980 |
| fragaria_vesca | FvH4_4g13230 |
| malus_domestica | MD00G1118600.v1.1 MD04G1017400.v1.1 |
| prunus_persica | Prupe.1G165500_v2.0.a1 |
| pyrus_communis | pycom04g01380 pycom420g00940 |
| rosa_chinensis | RchiOBHm_Chr4g0413481 |
| rosa_laevigata | RLG00000008216 |
| rosa_multiflora | Rmu_sc0000883.1_g000011 |
| rosa_roxburghii | Rroxscaffold_5G00357380 |
| rosa_rugosa | Rorug04G0120600 |
| rosa_samantha | Rh4AG180300 Rh4BG179600 Rh4CG191300 Rh4DG175500 |
| rosa_wichuraiana | Rw4G015010 Rw4G015070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1279 |
| Acc36I | ACCTGC | 1 cut(s) | 1279 |
| AccB1I | GGYRCC | 1 cut(s) | 40 |
| AccBSI | CCGCTC | 1 cut(s) | 371 |
| AccIII | TCCGGA | 1 cut(s) | 361 |
| AciI | CCGC | 7 cut(s) | 20, 24, 33, 140, 310, 371, 490 |
| AclWI | GGATC | 2 cut(s) | 233, 353 |
| AcoI | YGGCCR | 1 cut(s) | 1030 |
| AcsI | RAATTY | 3 cut(s) | 254, 496, 530 |
| AcuI | CTGAAG | 2 cut(s) | 74, 861 |
| AcyI | GRCGYC | 1 cut(s) | 41 |
| AfaI | GTAC | 2 cut(s) | 62, 858 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1118 |
| AflII | CTTAAG | 1 cut(s) | 296 |
| AgsI | TTSAA | 6 cut(s) | 178, 435, 442, 569, 732, 934 |
| AjnI | CCWGG | 2 cut(s) | 1000, 1324 |
| AluBI | AGCT | 9 cut(s) | 11, 198, 211, 397, 466, 593, 761, 1054, 1208 |
| AluI | AGCT | 9 cut(s) | 11, 198, 211, 397, 466, 593, 761, 1054, 1208 |
| Alw21I | GWGCWC | 1 cut(s) | 110 |
| Alw26I | GTCTC | 2 cut(s) | 736, 976 |
| AlwI | GGATC | 2 cut(s) | 233, 353 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 914 |
| Ama87I | CYCGRG | 1 cut(s) | 979 |
| Aor13HI | TCCGGA | 1 cut(s) | 361 |
| AoxI | GGCC | 4 cut(s) | 874, 1030, 1262, 1402 |
| ApeKI | GCWGC | 6 cut(s) | 445, 448, 466, 789, 994, 997 |
| ApoI | RAATTY | 3 cut(s) | 254, 496, 530 |
| AseI | ATTAAT | 1 cut(s) | 774 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 122, 713 |
| AspLEI | GCGC | 1 cut(s) | 43 |
| AspS9I | GGNCC | 2 cut(s) | 35, 1262 |
| AsuHPI | GGTGA | 4 cut(s) | 505, 635, 747, 1037 |
| AsuII | TTCGAA | 1 cut(s) | 229 |
| AvaI | CYCGRG | 1 cut(s) | 979 |
| AvaII | GGWCC | 1 cut(s) | 35 |
| BalI | TGGCCA | 1 cut(s) | 1032 |
| BanI | GGYRCC | 1 cut(s) | 40 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 258, 290 |
| BbsI | GAAGAC | 5 cut(s) | 62, 273, 483, 1002, 1221 |
| Bbv12I | GWGCWC | 1 cut(s) | 110 |
| BbvI | GCAGC | 6 cut(s) | 453, 457, 460, 801, 981, 1009 |
| BccI | CCATC | 4 cut(s) | 243, 806, 1022, 1385 |
| BceAI | ACGGC | 3 cut(s) | 28, 33, 527 |
| BciT130I | CCWGG | 2 cut(s) | 1002, 1326 |
| BclI | TGATCA | 1 cut(s) | 640 |
| BcoDI | GTCTC | 2 cut(s) | 736, 976 |
| BfaI | CTAG | 8 cut(s) | 195, 419, 579, 746, 828, 1061, 1142, 1400 |
| BfmI | CTRYAG | 3 cut(s) | 467, 647, 995 |
| BfoI | RGCGCY | 1 cut(s) | 44 |
| BfrI | CTTAAG | 1 cut(s) | 296 |
| BfuAI | ACCTGC | 1 cut(s) | 1279 |
| BglII | AGATCT | 1 cut(s) | 695 |
| BisI | GCNGC | 7 cut(s) | 372, 446, 449, 467, 790, 995, 998 |
| BlsI | GCNGC | 7 cut(s) | 373, 447, 450, 468, 791, 996, 999 |
| Bme1390I | CCNGG | 2 cut(s) | 1002, 1326 |
| Bme18I | GGWCC | 1 cut(s) | 35 |
| BmeT110I | CYCGRG | 1 cut(s) | 979 |
| BmgT120I | GGNCC | 2 cut(s) | 35, 1262 |
| BmiI | GGNNCC | 2 cut(s) | 42, 137 |
| BmrFI | CCNGG | 2 cut(s) | 1002, 1326 |
| BmsI | GCATC | 5 cut(s) | 298, 448, 1073, 1154, 1420 |
| BpiI | GAAGAC | 5 cut(s) | 62, 273, 483, 1002, 1221 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 358, 390 |
| BpmI | CTGGAG | 1 cut(s) | 1260 |
| Bpu14I | TTCGAA | 1 cut(s) | 229 |
| BpuEI | CTTGAG | 1 cut(s) | 327 |
| BsaBI | GATNNNNATC | 1 cut(s) | 639 |
| BsaHI | GRCGYC | 1 cut(s) | 41 |
| BsaJI | CCNNGG | 4 cut(s) | 501, 897, 1405, 1425 |
| BsaWI | WCCGGW | 1 cut(s) | 361 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1118 |
| Bse1I | ACTGG | 3 cut(s) | 653, 919, 1277 |
| Bse8I | GATNNNNATC | 1 cut(s) | 639 |
| BseAI | TCCGGA | 1 cut(s) | 361 |
| BseBI | CCWGG | 2 cut(s) | 1002, 1326 |
| BseDI | CCNNGG | 4 cut(s) | 501, 897, 1405, 1425 |
| BseGI | GGATG | 3 cut(s) | 79, 1393, 1435 |
| BseJI | GATNNNNATC | 1 cut(s) | 639 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1118 |
| BseMII | CTCAG | 2 cut(s) | 618, 690 |
| BseNI | ACTGG | 3 cut(s) | 653, 919, 1277 |
| BseRI | GAGGAG | 1 cut(s) | 42 |
| BseXI | GCAGC | 6 cut(s) | 453, 457, 460, 801, 981, 1009 |
| BshFI | GGCC | 4 cut(s) | 876, 1032, 1264, 1404 |
| BshNI | GGYRCC | 1 cut(s) | 40 |
| BsiHKAI | GWGCWC | 1 cut(s) | 110 |
| BsiHKCI | CYCGRG | 1 cut(s) | 979 |
| BsiSI | CCGG | 3 cut(s) | 38, 143, 362 |
| BsiWI | CGTACG | 1 cut(s) | 60 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1118 |
| BsmAI | GTCTC | 2 cut(s) | 736, 976 |
| BsmI | GAATGC | 1 cut(s) | 929 |
| BsnI | GGCC | 4 cut(s) | 876, 1032, 1264, 1404 |
| BsoBI | CYCGRG | 1 cut(s) | 979 |
| Bsp119I | TTCGAA | 1 cut(s) | 229 |
| Bsp1286I | GDGCHC | 1 cut(s) | 110 |
| Bsp13I | TCCGGA | 1 cut(s) | 361 |
| Bsp1407I | TGTACA | 1 cut(s) | 856 |
| Bsp143I | GATC | 7 cut(s) | 93, 238, 280, 358, 452, 640, 695 |
| Bsp19I | CCATGG | 1 cut(s) | 501 |
| BspACI | CCGC | 7 cut(s) | 20, 24, 33, 140, 310, 371, 490 |
| BspANI | GGCC | 4 cut(s) | 876, 1032, 1264, 1404 |
| BspCNI | CTCAG | 2 cut(s) | 617, 691 |
| BspEI | TCCGGA | 1 cut(s) | 361 |
| BspLI | GGNNCC | 2 cut(s) | 42, 137 |
| BspMAI | CTGCAG | 2 cut(s) | 471, 999 |
| BspMI | ACCTGC | 1 cut(s) | 1279 |
| BspPI | GGATC | 2 cut(s) | 233, 353 |
| BspT104I | TTCGAA | 1 cut(s) | 229 |
| BspT107I | GGYRCC | 1 cut(s) | 40 |
| BspTI | CTTAAG | 1 cut(s) | 296 |
| BsrBI | CCGCTC | 1 cut(s) | 371 |
| BsrGI | TGTACA | 1 cut(s) | 856 |
| BsrI | ACTGG | 3 cut(s) | 653, 919, 1277 |
| BssECI | CCNNGG | 4 cut(s) | 501, 897, 1405, 1425 |
| BssMI | GATC | 7 cut(s) | 93, 238, 280, 358, 452, 640, 695 |
| BssNI | GRCGYC | 1 cut(s) | 41 |
| BssT1I | CCWWGG | 3 cut(s) | 501, 897, 1425 |
| Bst2UI | CCWGG | 2 cut(s) | 1002, 1326 |
| Bst4CI | ACNGT | 3 cut(s) | 335, 970, 1308 |
| Bst6I | CTCTTC | 1 cut(s) | 113 |
| BstACI | GRCGYC | 1 cut(s) | 41 |
| BstAFI | CTTAAG | 1 cut(s) | 296 |
| BstAUI | TGTACA | 1 cut(s) | 856 |
| BstBI | TTCGAA | 1 cut(s) | 229 |
| BstC8I | GCNNGC | 1 cut(s) | 22 |
| BstDEI | CTNAG | 3 cut(s) | 535, 604, 699 |
| BstDSI | CCRYGG | 2 cut(s) | 501, 1405 |
| BstF5I | GGATG | 3 cut(s) | 79, 1393, 1435 |
| BstH2I | RGCGCY | 1 cut(s) | 44 |
| BstHHI | GCGC | 1 cut(s) | 43 |
| BstKTI | GATC | 7 cut(s) | 96, 241, 283, 361, 455, 643, 698 |
| BstMAI | GTCTC | 2 cut(s) | 736, 976 |
| BstMBI | GATC | 7 cut(s) | 93, 238, 280, 358, 452, 640, 695 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 17, 30, 49, 1430 |
| BstNI | CCWGG | 2 cut(s) | 1002, 1326 |
| BstNSI | RCATGY | 2 cut(s) | 612, 1222 |
| BstSCI | CCNGG | 2 cut(s) | 1000, 1324 |
| BstSFI | CTRYAG | 3 cut(s) | 467, 647, 995 |
| BstV1I | GCAGC | 6 cut(s) | 453, 457, 460, 801, 981, 1009 |
| BstV2I | GAAGAC | 5 cut(s) | 62, 273, 483, 1002, 1221 |
| BstX2I | RGATCY | 2 cut(s) | 358, 695 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 249 |
| BstYI | RGATCY | 2 cut(s) | 358, 695 |
| BsuRI | GGCC | 4 cut(s) | 876, 1032, 1264, 1404 |
| BtgI | CCRYGG | 2 cut(s) | 501, 1405 |
| BtsCI | GGATG | 3 cut(s) | 79, 1393, 1435 |
| BveI | ACCTGC | 1 cut(s) | 1279 |
| Cac8I | GCNNGC | 1 cut(s) | 22 |
| CaiI | CAGNNNCTG | 1 cut(s) | 914 |
| CfoI | GCGC | 1 cut(s) | 43 |
| Cfr13I | GGNCC | 2 cut(s) | 35, 1262 |
| CpoI | CGGWCCG | 1 cut(s) | 35 |
| Csp6I | GTAC | 2 cut(s) | 61, 857 |
| CspI | CGGWCCG | 1 cut(s) | 35 |
| CviAII | CATG | 5 cut(s) | 67, 404, 502, 609, 1219 |
| CviQI | GTAC | 2 cut(s) | 61, 857 |
| DdeI | CTNAG | 3 cut(s) | 535, 604, 699 |
| DinI | GGCGCC | 1 cut(s) | 42 |
| DpnI | GATC | 7 cut(s) | 95, 240, 282, 360, 454, 642, 697 |
| DpnII | GATC | 7 cut(s) | 93, 238, 280, 358, 452, 640, 695 |
| EaeI | YGGCCR | 1 cut(s) | 1030 |
| Eam1104I | CTCTTC | 1 cut(s) | 113 |
| EarI | CTCTTC | 1 cut(s) | 113 |
| EciI | GGCGGA | 1 cut(s) | 39 |
| Eco130I | CCWWGG | 3 cut(s) | 501, 897, 1425 |
| Eco147I | AGGCCT | 1 cut(s) | 876 |
| Eco32I | GATATC | 1 cut(s) | 1129 |
| Eco47I | GGWCC | 1 cut(s) | 35 |
| Eco57I | CTGAAG | 2 cut(s) | 74, 861 |
| Eco88I | CYCGRG | 1 cut(s) | 979 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1262 |
| EcoRI | GAATTC | 1 cut(s) | 496 |
| EcoRII | CCWGG | 2 cut(s) | 1000, 1324 |
| EcoRV | GATATC | 1 cut(s) | 1129 |
| EcoT14I | CCWWGG | 3 cut(s) | 501, 897, 1425 |
| EcoT22I | ATGCAT | 1 cut(s) | 1224 |
| EgeI | GGCGCC | 1 cut(s) | 42 |
| EheI | GGCGCC | 1 cut(s) | 42 |
| ErhI | CCWWGG | 3 cut(s) | 501, 897, 1425 |
| FaeI | CATG | 5 cut(s) | 70, 407, 505, 612, 1222 |
| FatI | CATG | 5 cut(s) | 66, 403, 501, 608, 1218 |
| FauI | CCCGC | 3 cut(s) | 13, 147, 483 |
| FauNDI | CATATG | 1 cut(s) | 1375 |
| FbaI | TGATCA | 1 cut(s) | 640 |
| Fnu4HI | GCNGC | 7 cut(s) | 372, 446, 449, 467, 790, 995, 998 |
| FokI | GGATG | 3 cut(s) | 86, 1400, 1442 |
| Fsp4HI | GCNGC | 7 cut(s) | 372, 446, 449, 467, 790, 995, 998 |
| FspBI | CTAG | 8 cut(s) | 195, 419, 579, 746, 828, 1061, 1142, 1400 |
| GlaI | GCGC | 1 cut(s) | 42 |
| GluI | GCNGC | 7 cut(s) | 372, 446, 449, 467, 790, 995, 998 |
| GsuI | CTGGAG | 1 cut(s) | 1260 |
| HaeII | RGCGCY | 1 cut(s) | 44 |
| HaeIII | GGCC | 4 cut(s) | 876, 1032, 1264, 1404 |
| HapII | CCGG | 3 cut(s) | 38, 143, 362 |
| HhaI | GCGC | 1 cut(s) | 43 |
| Hin1I | GRCGYC | 1 cut(s) | 41 |
| Hin1II | CATG | 5 cut(s) | 70, 407, 505, 612, 1222 |
| Hin6I | GCGC | 1 cut(s) | 41 |
| HinP1I | GCGC | 1 cut(s) | 41 |
| HindIII | AAGCTT | 1 cut(s) | 395 |
| HinfI | GANTC | 4 cut(s) | 77, 764, 941, 1172 |
| HpaII | CCGG | 3 cut(s) | 38, 143, 362 |
| HphI | GGTGA | 4 cut(s) | 505, 635, 747, 1037 |
| Hpy166II | GTNNAC | 1 cut(s) | 857 |
| Hpy188I | TCNGA | 8 cut(s) | 457, 552, 700, 769, 841, 910, 1177, 1336 |
| Hpy188III | TCNNGA | 8 cut(s) | 242, 362, 377, 693, 954, 1124, 1149, 1416 |
| Hpy8I | GTNNAC | 1 cut(s) | 857 |
| Hpy99I | CGWCG | 2 cut(s) | 19, 131 |
| HpyAV | CCTTC | 4 cut(s) | 511, 866, 1016, 1389 |
| HpyCH4III | ACNGT | 3 cut(s) | 335, 970, 1308 |
| HpyCH4IV | ACGT | 1 cut(s) | 59 |
| HpyCH4V | TGCA | 7 cut(s) | 461, 469, 887, 929, 997, 1078, 1222 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 17, 30, 49, 1430 |
| HpyF3I | CTNAG | 3 cut(s) | 535, 604, 699 |
| HpySE526I | ACGT | 1 cut(s) | 59 |
| Hsp92I | GRCGYC | 1 cut(s) | 41 |
| Hsp92II | CATG | 5 cut(s) | 70, 407, 505, 612, 1222 |
| HspAI | GCGC | 1 cut(s) | 41 |
| KasI | GGCGCC | 1 cut(s) | 40 |
| Kpn2I | TCCGGA | 1 cut(s) | 361 |
| Ksp22I | TGATCA | 1 cut(s) | 640 |
| Kzo9I | GATC | 7 cut(s) | 93, 238, 280, 358, 452, 640, 695 |
| LmnI | GCTCC | 5 cut(s) | 8, 105, 168, 1238, 1279 |
| Lsp1109I | GCAGC | 6 cut(s) | 453, 457, 460, 801, 981, 1009 |
| LweI | GCATC | 5 cut(s) | 298, 448, 1073, 1154, 1420 |
| MaeI | CTAG | 8 cut(s) | 195, 419, 579, 746, 828, 1061, 1142, 1400 |
| MaeII | ACGT | 1 cut(s) | 59 |
| MaeIII | GTNAC | 1 cut(s) | 753 |
| MalI | GATC | 7 cut(s) | 95, 240, 282, 360, 454, 642, 697 |
| MbiI | CCGCTC | 1 cut(s) | 371 |
| MboI | GATC | 7 cut(s) | 93, 238, 280, 358, 452, 640, 695 |
| MflI | RGATCY | 2 cut(s) | 358, 695 |
| MhlI | GDGCHC | 1 cut(s) | 110 |
| MlsI | TGGCCA | 1 cut(s) | 1032 |
| MluCI | AATT | 7 cut(s) | 254, 496, 530, 737, 749, 1046, 1357 |
| MluNI | TGGCCA | 1 cut(s) | 1032 |
| Mly113I | GGCGCC | 1 cut(s) | 41 |
| MmeI | TCCRAC | 3 cut(s) | 453, 848, 952 |
| MnlI | CCTC | 6 cut(s) | 20, 23, 351, 415, 1104, 1275 |
| Mox20I | TGGCCA | 1 cut(s) | 1032 |
| Mph1103I | ATGCAT | 1 cut(s) | 1224 |
| MroI | TCCGGA | 1 cut(s) | 361 |
| MroXI | GAANNNNTTC | 2 cut(s) | 122, 713 |
| MscI | TGGCCA | 1 cut(s) | 1032 |
| MseI | TTAA | 5 cut(s) | 297, 774, 849, 1049, 1154 |
| Msp20I | TGGCCA | 1 cut(s) | 1032 |
| MspA1I | CMGCKG | 3 cut(s) | 490, 761, 1208 |
| MspCI | CTTAAG | 1 cut(s) | 296 |
| MspI | CCGG | 3 cut(s) | 38, 143, 362 |
| MspR9I | CCNGG | 2 cut(s) | 1002, 1326 |
| Mva1269I | GAATGC | 1 cut(s) | 929 |
| MvaI | CCWGG | 2 cut(s) | 1002, 1326 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 17, 30, 49, 1430 |
| NarI | GGCGCC | 1 cut(s) | 41 |
| NcoI | CCATGG | 1 cut(s) | 501 |
| NdeI | CATATG | 1 cut(s) | 1375 |
| NdeII | GATC | 7 cut(s) | 93, 238, 280, 358, 452, 640, 695 |
| NlaIII | CATG | 5 cut(s) | 70, 407, 505, 612, 1222 |
| NlaIV | GGNNCC | 2 cut(s) | 42, 137 |
| NmeAIII | GCCGAG | 1 cut(s) | 133 |
| NmuCI | GTSAC | 1 cut(s) | 753 |
| NsiI | ATGCAT | 1 cut(s) | 1224 |
| NspI | RCATGY | 2 cut(s) | 612, 1222 |
| NspV | TTCGAA | 1 cut(s) | 229 |
| PaqCI | CACCTGC | 1 cut(s) | 1279 |
| PceI | AGGCCT | 1 cut(s) | 876 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 107 |
| PctI | GAATGC | 1 cut(s) | 929 |
| PdmI | GAANNNNTTC | 2 cut(s) | 122, 713 |
| PfeI | GAWTC | 4 cut(s) | 77, 764, 941, 1172 |
| Pfl23II | CGTACG | 1 cut(s) | 60 |
| PkrI | GCNGC | 7 cut(s) | 373, 447, 450, 468, 791, 996, 999 |
| PluTI | GGCGCC | 1 cut(s) | 44 |
| PshBI | ATTAAT | 1 cut(s) | 774 |
| Psp6I | CCWGG | 2 cut(s) | 1000, 1324 |
| PspGI | CCWGG | 2 cut(s) | 1000, 1324 |
| PspLI | CGTACG | 1 cut(s) | 60 |
| PspN4I | GGNNCC | 2 cut(s) | 42, 137 |
| PspPI | GGNCC | 2 cut(s) | 35, 1262 |
| PstI | CTGCAG | 2 cut(s) | 471, 999 |
| PstNI | CAGNNNCTG | 1 cut(s) | 914 |
| PsuI | RGATCY | 2 cut(s) | 358, 695 |
| PvuII | CAGCTG | 2 cut(s) | 761, 1208 |
| RsaI | GTAC | 2 cut(s) | 62, 858 |
| RsaNI | GTAC | 2 cut(s) | 61, 857 |
| Rsr2I | CGGWCCG | 1 cut(s) | 35 |
| RsrII | CGGWCCG | 1 cut(s) | 35 |
| SaqAI | TTAA | 5 cut(s) | 297, 774, 849, 1049, 1154 |
| SatI | GCNGC | 7 cut(s) | 372, 446, 449, 467, 790, 995, 998 |
| Sau3AI | GATC | 7 cut(s) | 93, 238, 280, 358, 452, 640, 695 |
| Sau96I | GGNCC | 2 cut(s) | 35, 1262 |
| ScrFI | CCNGG | 2 cut(s) | 1002, 1326 |
| SduI | GDGCHC | 1 cut(s) | 110 |
| SfaNI | GCATC | 5 cut(s) | 298, 448, 1073, 1154, 1420 |
| SfcI | CTRYAG | 3 cut(s) | 467, 647, 995 |
| SfoI | GGCGCC | 1 cut(s) | 42 |
| SfuI | TTCGAA | 1 cut(s) | 229 |
| SinI | GGWCC | 1 cut(s) | 35 |
| SmlI | CTYRAG | 2 cut(s) | 296, 342 |
| SmoI | CTYRAG | 2 cut(s) | 296, 342 |
| Sse9I | AATT | 7 cut(s) | 254, 496, 530, 737, 749, 1046, 1357 |
| SseBI | AGGCCT | 1 cut(s) | 876 |
| SsiI | CCGC | 7 cut(s) | 20, 24, 33, 140, 310, 371, 490 |
| SspDI | GGCGCC | 1 cut(s) | 40 |
| SspI | AATATT | 2 cut(s) | 430, 712 |
| SspMI | CTAG | 8 cut(s) | 195, 419, 579, 746, 828, 1061, 1142, 1400 |
| StuI | AGGCCT | 1 cut(s) | 876 |
| StyD4I | CCNGG | 2 cut(s) | 1000, 1324 |
| StyI | CCWWGG | 3 cut(s) | 501, 897, 1425 |
| TaaI | ACNGT | 3 cut(s) | 335, 970, 1308 |
| TaiI | ACGT | 1 cut(s) | 62 |
| TaqI | TCGA | 3 cut(s) | 14, 229, 588 |
| TaqII | GACCGA | 1 cut(s) | 1109 |
| TasI | AATT | 7 cut(s) | 254, 496, 530, 737, 749, 1046, 1357 |
| TatI | WGTACW | 1 cut(s) | 856 |
| TauI | GCSGC | 1 cut(s) | 374 |
| TfiI | GAWTC | 4 cut(s) | 77, 764, 941, 1172 |
| Tru1I | TTAA | 5 cut(s) | 297, 774, 849, 1049, 1154 |
| Tru9I | TTAA | 5 cut(s) | 297, 774, 849, 1049, 1154 |
| TseFI | GTSAC | 1 cut(s) | 753 |
| TseI | GCWGC | 6 cut(s) | 445, 448, 466, 789, 994, 997 |
| Tsp45I | GTSAC | 1 cut(s) | 753 |
| TspDTI | ATGAA | 7 cut(s) | 190, 262, 279, 822, 977, 1227, 1356 |
| TspGWI | ACGGA | 2 cut(s) | 237, 1422 |
| Vha464I | CTTAAG | 1 cut(s) | 296 |
| VpaK11BI | GGWCC | 1 cut(s) | 35 |
| VspI | ATTAAT | 1 cut(s) | 774 |
| XapI | RAATTY | 3 cut(s) | 254, 496, 530 |
| XceI | RCATGY | 2 cut(s) | 612, 1222 |
| XmnI | GAANNNNTTC | 2 cut(s) | 122, 713 |
| XspI | CTAG | 8 cut(s) | 195, 419, 579, 746, 828, 1061, 1142, 1400 |
| Zsp2I | ATGCAT | 1 cut(s) | 1224 |