Rw4G015010

Heat Stress Transcription Factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0013239
Physical Location & Seq
Forward (+)
34575133 .. 34578521
3389 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G015010.1

Sequence Viewer

Length: 1641 bp
ATGAAAACCGCTCGTTTTGAAAGCAGGTATTTCAAGTCAACCCTGGCTGGCTGCCGGGCAAAAAGCTTCGAAACTCTTCTATTCCATTCTCTCCTCTCTCTCTACACCTTCCGATCCCCACTTCCTCCATCTCTCTCCGCCGTTACACCCATTCGGATCCCAATCCAAGTCCGACCCGCCGAATCCCCCGACCTGACTCGTCTTTGCAAAATGGACGGAACCTCTGCTGCTGGCGGAGGCGGCGGTCCGGCGCCCTTCTTACTGAAGACGTACGACATGGTGGACGACTCGGCGACGGACGAGATCGTGTCGTGGAGCTCCAACAAGAAGAGCTTCGTCGTCTGGAACCCTCCAGAATTCGCTCGGATTCTGCTCCCCACCTATTTCAAGCACAACAACTTCTCTAGCTTCATCCGTCAGCTCAATACCTACGGATTTCGAAAGATTGATCCTGAAAGATGGGAGTTTGCTAATGAAGAATTTATACAAGATCAAAAGCATCTTCTTAAGAATATTCATCGCAGAAAACCCATTCATAGCCACAGTAATCCTCAGGGTTCTATGGTTGATCAGGAAAGAGCAGCTCTTGATGATGAAATAGAGAAGCTATCAAACGAAAAAGCTGCACTTGAGGCAAATGTTTCGAGGTTCCAGCAGCAGCGATCTGCTGAAAAGCTTCAGTTGGAAGACCTGACACAGCGGGTAAATGGTATGGAGCAGCGGCAGAAGAATTTACTAACATTCTTAGATAAAGCTGTTCAGAACCCTGCCTTTGTTGAACATCTAGCCCGAAAAATTGAATCTATGGATTTCTCAGCGTATAACAAGAAAAGGCGACTGCCTGATGCGGACCACTCAAAGCCAGTTGTGGACAATAGTTTTGTGGATAACCAAAGTAGCTCCAGATCGGAGTTTGGAAATTTTTTCCACCAAGACTTTTCAAGTAAGCTGAGACTGGAATTATCTCCAGCTGTTTCAGACATGAACCTGGTTTCACGTAGCACCCAGAGTTCCAATGAAGATGGGGATAGTTCAAGTAGGAAAATATCGGAAGAACTGAAAGGTGCACAGATGAGAACAGAAGGCCTTTTATTTGCGAATGAACCACTAGAACTTTCAGATACTGGAACATCTTTTGCATTCAAAATGGATTCGTTGTCACGAAAAGCACCAAATGTTGGAAGCCCTGGACTTCATTCCTTGCAGCCAGGTTTGCCTTCTAATGAAGATAGTGATGGCCAGATAACCTGTCACTTAAATCTCACACTATCATCTTCTCCCTTGAAAGTGATCAGTAGCCCGCATTCAGCTACGGTACCCCTAGTAGGTCAGGACATTTGCAACTCCCCATCCCCAGGTTTGAATGCCACTAACAAAGAATCAGATATAAGGGCCCTTCCACAGAAAAATCTGGCTGATGAAGACAGGCCTAAAAGTTCCCAAAAAGAGGCCACAAAACACAGTAAAGGGCATACATGTGTTCCTGTTAGAGTAAATGATGTTTTCTGGGAACAGTTCCTAACGGAAAGACCTGGTTGTTCAGAGAATGAAGAAGCGAGTTCTAATTTTAGAGAAAATCCGTATGATGAGCAAGATGCAATGGCCAGAAATGCTAAAGGTGCAGAAACACTTACTCTTTGA

Protein Analysis

546

Amino Acids

61.09

Weight (kDa)

6.31

Isoelectric Point (pI)

55.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSF_DNA-bind PF00447 86 - 175 6.5e-29 HSF-type DNA-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013239)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G13980
fragaria_vesca FvH4_4g13230
malus_domestica MD00G1118600.v1.1 MD04G1017400.v1.1
prunus_persica Prupe.1G165500_v2.0.a1
pyrus_communis pycom04g01380 pycom420g00940
rosa_chinensis RchiOBHm_Chr4g0413481
rosa_laevigata RLG00000008216
rosa_multiflora Rmu_sc0000883.1_g000011
rosa_roxburghii Rroxscaffold_5G00357380
rosa_rugosa Rorug04G0120600
rosa_samantha Rh4AG180300 Rh4BG179600 Rh4CG191300 Rh4DG175500
rosa_wichuraiana Rw4G015010 Rw4G015070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 15
Acc65I GGTACC 1 cut(s) 1315
AccB1I GGYRCC 2 cut(s) 250, 1315
AccB7I CCANNNNNTGG 1 cut(s) 1178
AccBSI CCGCTC 1 cut(s) 11
AclWI GGATC 4 cut(s) 108, 151, 164, 443
AcoI YGGCCR 2 cut(s) 1237, 1602
AcsI RAATTY 4 cut(s) 356, 479, 730, 919
AcuI CTGAAG 2 cut(s) 284, 662
AcyI GRCGYC 1 cut(s) 251
AfaI GTAC 2 cut(s) 272, 1317
AfiI CCNNNNNNNGG 4 cut(s) 1178, 1325, 1355, 1447
AflII CTTAAG 1 cut(s) 506
AflIII ACRYGT 1 cut(s) 1475
AjnI CCWGG 6 cut(s) 42, 987, 1186, 1207, 1354, 1531
Alw21I GWGCWC 2 cut(s) 320, 1069
Alw26I GTCTC 1 cut(s) 946
Alw44I GTGCAC 1 cut(s) 1065
AlwI GGATC 4 cut(s) 108, 151, 164, 443
AlwNI CAGNNNCTG 1 cut(s) 1124
AoxI GGCC 6 cut(s) 1084, 1237, 1392, 1427, 1449, 1602
ApaI GGGCCC 1 cut(s) 1396
ApaLI GTGCAC 1 cut(s) 1065
ApeKI GCWGC 8 cut(s) 51, 227, 581, 623, 655, 658, 718, 1204
ApoI RAATTY 4 cut(s) 356, 479, 730, 919
ArsI GACNNNNNNTTYG 2 cut(s) 863, 895
Asp700I GAANNNNTTC 3 cut(s) 75, 332, 675
Asp718I GGTACC 1 cut(s) 1315
AspLEI GCGC 1 cut(s) 253
AspS9I GGNCC 4 cut(s) 245, 850, 1392, 1393
AsuC2I CCSGG 1 cut(s) 56
AsuII TTCGAA 2 cut(s) 69, 439
AvaII GGWCC 2 cut(s) 245, 850
AxyI CCTNAGG 1 cut(s) 552
BaeGI GKGCMC 2 cut(s) 1069, 1396
BalI TGGCCA 2 cut(s) 1239, 1604
BamHI GGATCC 1 cut(s) 156
BanI GGYRCC 2 cut(s) 250, 1315
BanII GRGCYC 2 cut(s) 320, 1396
BarI GAAGNNNNNNTAC 2 cut(s) 468, 500
BbsI GAAGAC 3 cut(s) 272, 693, 1428
Bbv12I GWGCWC 2 cut(s) 320, 1069
BbvI GCAGC 8 cut(s) 38, 214, 593, 610, 667, 670, 730, 1216
BccI CCATC 5 cut(s) 136, 453, 1016, 1229, 1357
BceAI ACGGC 1 cut(s) 125
BcgI CGANNNNNNTGC 4 cut(s) 605, 624, 639, 658
BciT130I CCWGG 6 cut(s) 44, 989, 1188, 1209, 1356, 1533
BclI TGATCA 2 cut(s) 568, 1290
BcnI CCSGG 1 cut(s) 56
BcoDI GTCTC 1 cut(s) 946
BfaI CTAG 4 cut(s) 405, 785, 1109, 1322
BfoI RGCGCY 1 cut(s) 254
BfrI CTTAAG 1 cut(s) 506
BfuAI ACCTGC 1 cut(s) 15
Bme1390I CCNGG 7 cut(s) 44, 56, 989, 1188, 1209, 1356, 1533
Bme18I GGWCC 2 cut(s) 245, 850
BmgT120I GGNCC 4 cut(s) 245, 850, 1392, 1393
BmiI GGNNCC 7 cut(s) 158, 220, 252, 347, 650, 1317, 1394
BmrFI CCNGG 7 cut(s) 44, 56, 989, 1188, 1209, 1356, 1533
BmsI GCATC 3 cut(s) 508, 835, 1585
BpiI GAAGAC 3 cut(s) 272, 693, 1428
BpmI CTGGAG 3 cut(s) 336, 886, 951
Bpu14I TTCGAA 2 cut(s) 69, 439
BpuEI CTTGAG 1 cut(s) 650
BpuMI CCSGG 1 cut(s) 56
BsaAI YACGTR 1 cut(s) 998
BsaBI GATNNNNATC 1 cut(s) 161
BsaHI GRCGYC 1 cut(s) 251
BsaJI CCNNGG 3 cut(s) 42, 1186, 1354
Bsc4I CCNNNNNNNGG 4 cut(s) 1178, 1325, 1355, 1447
Bse1I ACTGG 3 cut(s) 863, 960, 1129
Bse21I CCTNAGG 1 cut(s) 552
Bse3DI GCAATG 1 cut(s) 1605
Bse8I GATNNNNATC 1 cut(s) 161
BseBI CCWGG 6 cut(s) 44, 989, 1188, 1209, 1356, 1533
BseDI CCNNGG 3 cut(s) 42, 1186, 1354
BseGI GGATG 2 cut(s) 411, 1349
BseJI GATNNNNATC 1 cut(s) 161
BseLI CCNNNNNNNGG 4 cut(s) 1178, 1325, 1355, 1447
BseMI GCAATG 1 cut(s) 1605
BseMII CTCAG 3 cut(s) 566, 828, 941
BseNI ACTGG 3 cut(s) 863, 960, 1129
BseRI GAGGAG 1 cut(s) 83
BseSI GKGCMC 2 cut(s) 1069, 1396
BseXI GCAGC 8 cut(s) 38, 214, 593, 610, 667, 670, 730, 1216
BsgI GTGCAG 2 cut(s) 609, 1641
BshFI GGCC 6 cut(s) 1086, 1239, 1394, 1429, 1451, 1604
BshNI GGYRCC 2 cut(s) 250, 1315
BsiHKAI GWGCWC 2 cut(s) 320, 1069
BsiSI CCGG 2 cut(s) 55, 248
BsiWI CGTACG 1 cut(s) 270
BslI CCNNNNNNNGG 4 cut(s) 1178, 1325, 1355, 1447
BsmAI GTCTC 1 cut(s) 946
BsmI GAATGC 3 cut(s) 1139, 1303, 1369
BsnI GGCC 6 cut(s) 1086, 1239, 1394, 1429, 1451, 1604
Bsp119I TTCGAA 2 cut(s) 69, 439
Bsp120I GGGCCC 1 cut(s) 1392
Bsp1286I GDGCHC 3 cut(s) 320, 1069, 1396
Bsp143I GATC 9 cut(s) 113, 156, 303, 448, 490, 568, 662, 905, 1290
BspANI GGCC 6 cut(s) 1086, 1239, 1394, 1429, 1451, 1604
BspCNI CTCAG 3 cut(s) 565, 827, 942
BspLI GGNNCC 7 cut(s) 158, 220, 252, 347, 650, 1317, 1394
BspMI ACCTGC 1 cut(s) 15
BspPI GGATC 4 cut(s) 108, 151, 164, 443
BspQI GCTCTTC 1 cut(s) 323
BspT104I TTCGAA 2 cut(s) 69, 439
BspT107I GGYRCC 2 cut(s) 250, 1315
BspTI CTTAAG 1 cut(s) 506
BsrBI CCGCTC 1 cut(s) 11
BsrDI GCAATG 1 cut(s) 1605
BsrI ACTGG 3 cut(s) 863, 960, 1129
BssECI CCNNGG 3 cut(s) 42, 1186, 1354
BssMI GATC 9 cut(s) 113, 156, 303, 448, 490, 568, 662, 905, 1290
BssNI GRCGYC 1 cut(s) 251
Bst2UI CCWGG 6 cut(s) 44, 989, 1188, 1209, 1356, 1533
Bst4CI ACNGT 4 cut(s) 545, 1315, 1463, 1515
Bst6I CTCTTC 2 cut(s) 81, 323
BstACI GRCGYC 1 cut(s) 251
BstAFI CTTAAG 1 cut(s) 506
BstBAI YACGTR 1 cut(s) 998
BstBI TTCGAA 2 cut(s) 69, 439
BstC8I GCNNGC 3 cut(s) 49, 232, 1301
BstDEI CTNAG 4 cut(s) 552, 745, 814, 950
BstF5I GGATG 2 cut(s) 411, 1349
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 1 cut(s) 253
BstKTI GATC 9 cut(s) 116, 159, 306, 451, 493, 571, 665, 908, 1293
BstMAI GTCTC 1 cut(s) 946
BstMBI GATC 9 cut(s) 113, 156, 303, 448, 490, 568, 662, 905, 1290
BstMWI GCNNNNNNNGC 5 cut(s) 240, 632, 1213, 1610, 1619
BstNI CCWGG 6 cut(s) 44, 989, 1188, 1209, 1356, 1533
BstNSI RCATGY 1 cut(s) 1479
BstSCI CCNGG 7 cut(s) 42, 54, 987, 1186, 1207, 1354, 1531
BstSLI GKGCMC 2 cut(s) 1069, 1396
BstV1I GCAGC 8 cut(s) 38, 214, 593, 610, 667, 670, 730, 1216
BstV2I GAAGAC 3 cut(s) 272, 693, 1428
BstX2I RGATCY 1 cut(s) 156
BstYI RGATCY 1 cut(s) 156
Bsu36I CCTNAGG 1 cut(s) 552
BsuRI GGCC 6 cut(s) 1086, 1239, 1394, 1429, 1451, 1604
BtgZI GCGATG 1 cut(s) 503
BtsCI GGATG 2 cut(s) 411, 1349
BveI ACCTGC 1 cut(s) 15
Cac8I GCNNGC 3 cut(s) 49, 232, 1301
CaiI CAGNNNCTG 1 cut(s) 1124
CfoI GCGC 1 cut(s) 253
Cfr13I GGNCC 4 cut(s) 245, 850, 1392, 1393
CpoI CGGWCCG 1 cut(s) 245
CsiI ACCWGGT 2 cut(s) 987, 1531
Csp6I GTAC 2 cut(s) 271, 1316
CspI CGGWCCG 1 cut(s) 245
CviAII CATG 3 cut(s) 277, 982, 1476
CviQI GTAC 2 cut(s) 271, 1316
DdeI CTNAG 4 cut(s) 552, 745, 814, 950
DinI GGCGCC 1 cut(s) 252
DpnI GATC 9 cut(s) 115, 158, 305, 450, 492, 570, 664, 907, 1292
DpnII GATC 9 cut(s) 113, 156, 303, 448, 490, 568, 662, 905, 1290
EaeI YGGCCR 2 cut(s) 1237, 1602
Eam1104I CTCTTC 2 cut(s) 81, 323
EarI CTCTTC 2 cut(s) 81, 323
EciI GGCGGA 2 cut(s) 127, 249
Ecl136II GAGCTC 1 cut(s) 318
Eco147I AGGCCT 2 cut(s) 1086, 1429
Eco24I GRGCYC 2 cut(s) 320, 1396
Eco47I GGWCC 2 cut(s) 245, 850
Eco53kI GAGCTC 1 cut(s) 318
Eco57I CTGAAG 2 cut(s) 284, 662
Eco81I CCTNAGG 1 cut(s) 552
EcoICRI GAGCTC 1 cut(s) 318
EcoO109I RGGNCCY 2 cut(s) 1392, 1393
EcoRI GAATTC 1 cut(s) 356
EcoRII CCWGG 6 cut(s) 42, 987, 1186, 1207, 1354, 1531
EcoT38I GRGCYC 2 cut(s) 320, 1396
EgeI GGCGCC 1 cut(s) 252
EheI GGCGCC 1 cut(s) 252
FaeI CATG 3 cut(s) 280, 985, 1479
FalI AAGNNNNNCTT 4 cut(s) 317, 349, 612, 644
FatI CATG 3 cut(s) 276, 981, 1475
FauI CCCGC 3 cut(s) 184, 693, 1308
FbaI TGATCA 2 cut(s) 568, 1290
FokI GGATG 2 cut(s) 398, 1336
FriOI GRGCYC 2 cut(s) 320, 1396
FspBI CTAG 4 cut(s) 405, 785, 1109, 1322
GlaI GCGC 1 cut(s) 252
GsuI CTGGAG 3 cut(s) 336, 886, 951
HaeII RGCGCY 1 cut(s) 254
HaeIII GGCC 6 cut(s) 1086, 1239, 1394, 1429, 1451, 1604
HapII CCGG 2 cut(s) 55, 248
HhaI GCGC 1 cut(s) 253
Hin1I GRCGYC 1 cut(s) 251
Hin1II CATG 3 cut(s) 280, 985, 1479
Hin6I GCGC 1 cut(s) 251
HinP1I GCGC 1 cut(s) 251
HincII GTYRAC 1 cut(s) 39
HindII GTYRAC 1 cut(s) 39
HindIII AAGCTT 2 cut(s) 64, 674
HinfI GANTC 7 cut(s) 182, 196, 287, 367, 800, 1151, 1379
HpaII CCGG 2 cut(s) 55, 248
Hpy166II GTNNAC 4 cut(s) 39, 283, 871, 1067
Hpy188III TCNNGA 8 cut(s) 343, 353, 452, 572, 587, 903, 1161, 1331
Hpy8I GTNNAC 4 cut(s) 39, 283, 871, 1067
Hpy99I CGWCG 2 cut(s) 298, 341
HpyAV CCTTC 5 cut(s) 118, 265, 1076, 1227, 1406
HpyCH4III ACNGT 4 cut(s) 545, 1315, 1463, 1515
HpyCH4IV ACGT 2 cut(s) 269, 997
HpyCH4V TGCA 8 cut(s) 207, 626, 1067, 1139, 1204, 1341, 1598, 1622
HpyF10VI GCNNNNNNNGC 5 cut(s) 240, 632, 1213, 1610, 1619
HpyF3I CTNAG 4 cut(s) 552, 745, 814, 950
HpySE526I ACGT 2 cut(s) 269, 997
Hsp92I GRCGYC 1 cut(s) 251
Hsp92II CATG 3 cut(s) 280, 985, 1479
HspAI GCGC 1 cut(s) 251
KasI GGCGCC 1 cut(s) 250
KpnI GGTACC 1 cut(s) 1319
Ksp22I TGATCA 2 cut(s) 568, 1290
Kzo9I GATC 9 cut(s) 113, 156, 303, 448, 490, 568, 662, 905, 1290
LguI GCTCTTC 1 cut(s) 323
LmnI GCTCC 5 cut(s) 315, 323, 378, 715, 905
Lsp1109I GCAGC 8 cut(s) 38, 214, 593, 610, 667, 670, 730, 1216
LweI GCATC 3 cut(s) 508, 835, 1585
MabI ACCWGGT 2 cut(s) 987, 1531
MaeI CTAG 4 cut(s) 405, 785, 1109, 1322
MaeII ACGT 2 cut(s) 269, 997
MaeIII GTNAC 3 cut(s) 142, 1158, 1250
MalI GATC 9 cut(s) 115, 158, 305, 450, 492, 570, 664, 907, 1292
MbiI CCGCTC 1 cut(s) 11
MboI GATC 9 cut(s) 113, 156, 303, 448, 490, 568, 662, 905, 1290
MflI RGATCY 1 cut(s) 156
MhlI GDGCHC 3 cut(s) 320, 1069, 1396
MlsI TGGCCA 2 cut(s) 1239, 1604
MluCI AATT 7 cut(s) 356, 479, 730, 795, 919, 959, 1564
MluNI TGGCCA 2 cut(s) 1239, 1604
Mly113I GGCGCC 1 cut(s) 251
MlyI GAGTC 2 cut(s) 190, 281
MmeI TCCRAC 4 cut(s) 196, 345, 663, 1159
MnlI CCTC 9 cut(s) 104, 135, 230, 232, 360, 561, 625, 639, 1441
Mox20I TGGCCA 2 cut(s) 1239, 1604
MroXI GAANNNNTTC 3 cut(s) 75, 332, 675
MscI TGGCCA 2 cut(s) 1239, 1604
MseI TTAA 2 cut(s) 507, 1256
MslI CAYNNNNRTG 1 cut(s) 1476
Msp20I TGGCCA 2 cut(s) 1239, 1604
MspA1I CMGCKG 3 cut(s) 700, 721, 971
MspCI CTTAAG 1 cut(s) 506
MspI CCGG 2 cut(s) 55, 248
MspR9I CCNGG 7 cut(s) 44, 56, 989, 1188, 1209, 1356, 1533
Mva1269I GAATGC 3 cut(s) 1139, 1303, 1369
MvaI CCWGG 6 cut(s) 44, 989, 1188, 1209, 1356, 1533
MwoI GCNNNNNNNGC 5 cut(s) 240, 632, 1213, 1610, 1619
NarI GGCGCC 1 cut(s) 251
NciI CCSGG 1 cut(s) 56
NdeII GATC 9 cut(s) 113, 156, 303, 448, 490, 568, 662, 905, 1290
NlaIII CATG 3 cut(s) 280, 985, 1479
NlaIV GGNNCC 7 cut(s) 158, 220, 252, 347, 650, 1317, 1394
NmeAIII GCCGAG 1 cut(s) 269
NmuCI GTSAC 2 cut(s) 1158, 1250
NspI RCATGY 1 cut(s) 1479
NspV TTCGAA 2 cut(s) 69, 439
PceI AGGCCT 2 cut(s) 1086, 1429
PciI ACATGT 1 cut(s) 1475
PciSI GCTCTTC 1 cut(s) 323
PctI GAATGC 3 cut(s) 1139, 1303, 1369
PdmI GAANNNNTTC 3 cut(s) 75, 332, 675
PfeI GAWTC 5 cut(s) 182, 367, 800, 1151, 1379
Pfl23II CGTACG 1 cut(s) 270
PflMI CCANNNNNTGG 1 cut(s) 1178
PleI GAGTC 2 cut(s) 190, 281
PluTI GGCGCC 1 cut(s) 254
PpsI GAGTC 2 cut(s) 190, 281
Ppu21I YACGTR 1 cut(s) 998
PscI ACATGT 1 cut(s) 1475
Psp124BI GAGCTC 1 cut(s) 320
Psp6I CCWGG 6 cut(s) 42, 987, 1186, 1207, 1354, 1531
PspGI CCWGG 6 cut(s) 42, 987, 1186, 1207, 1354, 1531
PspLI CGTACG 1 cut(s) 270
PspN4I GGNNCC 7 cut(s) 158, 220, 252, 347, 650, 1317, 1394
PspOMI GGGCCC 1 cut(s) 1392
PspPI GGNCC 4 cut(s) 245, 850, 1392, 1393
PstNI CAGNNNCTG 1 cut(s) 1124
PsuI RGATCY 1 cut(s) 156
PvuII CAGCTG 1 cut(s) 971
RsaI GTAC 2 cut(s) 272, 1317
RsaNI GTAC 2 cut(s) 271, 1316
RseI CAYNNNNRTG 1 cut(s) 1476
Rsr2I CGGWCCG 1 cut(s) 245
RsrII CGGWCCG 1 cut(s) 245
SacI GAGCTC 1 cut(s) 320
SapI GCTCTTC 1 cut(s) 323
SaqAI TTAA 2 cut(s) 507, 1256
Sau3AI GATC 9 cut(s) 113, 156, 303, 448, 490, 568, 662, 905, 1290
Sau96I GGNCC 4 cut(s) 245, 850, 1392, 1393
SchI GAGTC 2 cut(s) 190, 281
ScrFI CCNGG 7 cut(s) 44, 56, 989, 1188, 1209, 1356, 1533
SduI GDGCHC 3 cut(s) 320, 1069, 1396
SexAI ACCWGGT 2 cut(s) 987, 1531
SfaNI GCATC 3 cut(s) 508, 835, 1585
SfoI GGCGCC 1 cut(s) 252
SfuI TTCGAA 2 cut(s) 69, 439
SinI GGWCC 2 cut(s) 245, 850
SmiMI CAYNNNNRTG 1 cut(s) 1476
SmlI CTYRAG 2 cut(s) 506, 629
SmoI CTYRAG 2 cut(s) 506, 629
Sse9I AATT 7 cut(s) 356, 479, 730, 795, 919, 959, 1564
SseBI AGGCCT 2 cut(s) 1086, 1429
SspDI GGCGCC 1 cut(s) 250
SspI AATATT 1 cut(s) 514
SspMI CTAG 4 cut(s) 405, 785, 1109, 1322
SstI GAGCTC 1 cut(s) 320
StuI AGGCCT 2 cut(s) 1086, 1429
StyD4I CCNGG 7 cut(s) 42, 54, 987, 1186, 1207, 1354, 1531
TaaI ACNGT 4 cut(s) 545, 1315, 1463, 1515
TaiI ACGT 2 cut(s) 272, 1000
TaqI TCGA 3 cut(s) 69, 439, 644
TasI AATT 7 cut(s) 356, 479, 730, 795, 919, 959, 1564
TauI GCSGC 2 cut(s) 243, 724
TfiI GAWTC 5 cut(s) 182, 367, 800, 1151, 1379
Tru1I TTAA 2 cut(s) 507, 1256
Tru9I TTAA 2 cut(s) 507, 1256
TseFI GTSAC 2 cut(s) 1158, 1250
TseI GCWGC 8 cut(s) 51, 227, 581, 623, 655, 658, 718, 1204
Tsp45I GTSAC 2 cut(s) 1158, 1250
TspGWI ACGGA 6 cut(s) 231, 311, 404, 447, 1538, 1569
Van91I CCANNNNNTGG 1 cut(s) 1178
Vha464I CTTAAG 1 cut(s) 506
VneI GTGCAC 1 cut(s) 1065
VpaK11BI GGWCC 2 cut(s) 245, 850
XapI RAATTY 4 cut(s) 356, 479, 730, 919
XceI RCATGY 1 cut(s) 1479
XmnI GAANNNNTTC 3 cut(s) 75, 332, 675
XspI CTAG 4 cut(s) 405, 785, 1109, 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.