Cop9 signalosome complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14110 |
| fragaria_vesca | FvH4_5g29770 |
| malus_domestica | MD08G1227500.v1.1 MD15G1419900.v1.1 |
| prunus_persica | Prupe.1G186200_v2.0.a1 Prupe.1G186200_v2.0.a1 Prupe.1G564800_v2.0.a1 |
| pyrus_communis | pycom08g19850 pycom15g37270 |
| rosa_chinensis | RchiOBHm_Chr7g0223291 |
| rosa_laevigata | RLG00000001990 |
| rosa_multiflora | Rmu_sc0005124.1_g000011 Rmu_sc0013144.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00235950 |
| rosa_rugosa | Rorug07G0215800 |
| rosa_samantha | Rh7BG347400 Rh7BG349000 Rh7CG378000 Rh7DG354900 |
| rosa_wichuraiana | Rw0G009420 Rw7G030560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 217 |
| AcoI | YGGCCR | 1 cut(s) | 289 |
| AcuI | CTGAAG | 1 cut(s) | 107 |
| AfaI | GTAC | 1 cut(s) | 501 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 64 |
| AluBI | AGCT | 4 cut(s) | 332, 362, 415, 458 |
| AluI | AGCT | 4 cut(s) | 332, 362, 415, 458 |
| Alw21I | GWGCWC | 1 cut(s) | 117 |
| Alw26I | GTCTC | 1 cut(s) | 303 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 418, 580 |
| AoxI | GGCC | 3 cut(s) | 66, 161, 289 |
| ApeKI | GCWGC | 5 cut(s) | 38, 131, 275, 377, 556 |
| AseI | ATTAAT | 1 cut(s) | 207 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 333 |
| AspS9I | GGNCC | 2 cut(s) | 162, 523 |
| AsuHPI | GGTGA | 1 cut(s) | 212 |
| AvaII | GGWCC | 1 cut(s) | 523 |
| BalI | TGGCCA | 1 cut(s) | 291 |
| Bbv12I | GWGCWC | 1 cut(s) | 117 |
| BbvI | GCAGC | 5 cut(s) | 50, 143, 262, 389, 568 |
| BccI | CCATC | 1 cut(s) | 630 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 125, 159, 467, 501 |
| BcoDI | GTCTC | 1 cut(s) | 303 |
| BfaI | CTAG | 1 cut(s) | 626 |
| BfmI | CTRYAG | 1 cut(s) | 419 |
| BglII | AGATCT | 1 cut(s) | 388 |
| BisI | GCNGC | 5 cut(s) | 39, 132, 276, 378, 557 |
| BlsI | GCNGC | 5 cut(s) | 40, 133, 277, 379, 558 |
| Bme18I | GGWCC | 1 cut(s) | 523 |
| BmgT120I | GGNCC | 2 cut(s) | 162, 523 |
| BmiI | GGNNCC | 1 cut(s) | 525 |
| BmsI | GCATC | 4 cut(s) | 294, 453, 475, 574 |
| BpuEI | CTTGAG | 1 cut(s) | 348 |
| BsaJI | CCNNGG | 3 cut(s) | 42, 135, 466 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 64 |
| Bse1I | ACTGG | 3 cut(s) | 164, 585, 588 |
| Bse3DI | GCAATG | 1 cut(s) | 270 |
| BseDI | CCNNGG | 3 cut(s) | 42, 135, 466 |
| BseGI | GGATG | 4 cut(s) | 309, 444, 487, 589 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseMI | GCAATG | 1 cut(s) | 270 |
| BseNI | ACTGG | 3 cut(s) | 164, 585, 588 |
| BseXI | GCAGC | 5 cut(s) | 50, 143, 262, 389, 568 |
| BshFI | GGCC | 3 cut(s) | 68, 163, 291 |
| BsiHKAI | GWGCWC | 1 cut(s) | 117 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BsmAI | GTCTC | 1 cut(s) | 303 |
| BsnI | GGCC | 3 cut(s) | 68, 163, 291 |
| Bsp1286I | GDGCHC | 1 cut(s) | 117 |
| Bsp1407I | TGTACA | 1 cut(s) | 499 |
| Bsp143I | GATC | 1 cut(s) | 388 |
| Bsp19I | CCATGG | 1 cut(s) | 42 |
| BspACI | CCGC | 1 cut(s) | 217 |
| BspANI | GGCC | 3 cut(s) | 68, 163, 291 |
| BspLI | GGNNCC | 1 cut(s) | 525 |
| BspMAI | CTGCAG | 1 cut(s) | 423 |
| BsrDI | GCAATG | 1 cut(s) | 270 |
| BsrGI | TGTACA | 1 cut(s) | 499 |
| BsrI | ACTGG | 3 cut(s) | 164, 585, 588 |
| BssECI | CCNNGG | 3 cut(s) | 42, 135, 466 |
| BssMI | GATC | 1 cut(s) | 388 |
| BssT1I | CCWWGG | 2 cut(s) | 42, 466 |
| Bst4CI | ACNGT | 1 cut(s) | 547 |
| Bst6I | CTCTTC | 1 cut(s) | 467 |
| BstAUI | TGTACA | 1 cut(s) | 499 |
| BstC8I | GCNNGC | 1 cut(s) | 240 |
| BstDSI | CCRYGG | 1 cut(s) | 42 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 62 |
| BstF5I | GGATG | 4 cut(s) | 309, 444, 487, 589 |
| BstKTI | GATC | 1 cut(s) | 391 |
| BstMAI | GTCTC | 1 cut(s) | 303 |
| BstMBI | GATC | 1 cut(s) | 388 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 35 |
| BstNSI | RCATGY | 1 cut(s) | 121 |
| BstSFI | CTRYAG | 1 cut(s) | 419 |
| BstV1I | GCAGC | 5 cut(s) | 50, 143, 262, 389, 568 |
| BstX2I | RGATCY | 1 cut(s) | 388 |
| BstYI | RGATCY | 1 cut(s) | 388 |
| BsuRI | GGCC | 3 cut(s) | 68, 163, 291 |
| BtgI | CCRYGG | 1 cut(s) | 42 |
| BtsCI | GGATG | 4 cut(s) | 309, 444, 487, 589 |
| Cac8I | GCNNGC | 1 cut(s) | 240 |
| CaiI | CAGNNNCTG | 2 cut(s) | 418, 580 |
| Cfr13I | GGNCC | 2 cut(s) | 162, 523 |
| Csp6I | GTAC | 1 cut(s) | 500 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 478, 513 |
| CviAII | CATG | 2 cut(s) | 43, 118 |
| CviQI | GTAC | 1 cut(s) | 500 |
| DpnI | GATC | 1 cut(s) | 390 |
| DpnII | GATC | 1 cut(s) | 388 |
| EaeI | YGGCCR | 1 cut(s) | 289 |
| Eam1104I | CTCTTC | 1 cut(s) | 467 |
| EarI | CTCTTC | 1 cut(s) | 467 |
| Eco130I | CCWWGG | 2 cut(s) | 42, 466 |
| Eco147I | AGGCCT | 1 cut(s) | 68 |
| Eco32I | GATATC | 1 cut(s) | 103 |
| Eco47I | GGWCC | 1 cut(s) | 523 |
| Eco57I | CTGAAG | 1 cut(s) | 107 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 62 |
| EcoRV | GATATC | 1 cut(s) | 103 |
| EcoT14I | CCWWGG | 2 cut(s) | 42, 466 |
| ErhI | CCWWGG | 2 cut(s) | 42, 466 |
| FaeI | CATG | 2 cut(s) | 46, 121 |
| FaiI | YATR | 9 cut(s) | 44, 87, 119, 215, 315, 327, 345, 407, 615 |
| FatI | CATG | 2 cut(s) | 42, 117 |
| Fnu4HI | GCNGC | 5 cut(s) | 39, 132, 276, 378, 557 |
| FokI | GGATG | 4 cut(s) | 316, 431, 494, 596 |
| Fsp4HI | GCNGC | 5 cut(s) | 39, 132, 276, 378, 557 |
| FspBI | CTAG | 1 cut(s) | 626 |
| GluI | GCNGC | 5 cut(s) | 39, 132, 276, 378, 557 |
| HaeIII | GGCC | 3 cut(s) | 68, 163, 291 |
| Hin1II | CATG | 2 cut(s) | 46, 121 |
| HinfI | GANTC | 1 cut(s) | 352 |
| HphI | GGTGA | 1 cut(s) | 212 |
| Hpy166II | GTNNAC | 1 cut(s) | 523 |
| Hpy188I | TCNGA | 2 cut(s) | 64, 388 |
| Hpy188III | TCNNGA | 4 cut(s) | 152, 263, 356, 626 |
| Hpy8I | GTNNAC | 1 cut(s) | 523 |
| HpyCH4III | ACNGT | 1 cut(s) | 547 |
| HpyCH4V | TGCA | 3 cut(s) | 377, 421, 598 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 35 |
| Hsp92II | CATG | 2 cut(s) | 46, 121 |
| Kzo9I | GATC | 1 cut(s) | 388 |
| LmnI | GCTCC | 1 cut(s) | 420 |
| Lsp1109I | GCAGC | 5 cut(s) | 50, 143, 262, 389, 568 |
| LweI | GCATC | 4 cut(s) | 294, 453, 475, 574 |
| MaeI | CTAG | 1 cut(s) | 626 |
| MaeIII | GTNAC | 3 cut(s) | 107, 185, 565 |
| MalI | GATC | 1 cut(s) | 390 |
| MboI | GATC | 1 cut(s) | 388 |
| MboII | GAAGA | 3 cut(s) | 170, 454, 562 |
| MflI | RGATCY | 1 cut(s) | 388 |
| MhlI | GDGCHC | 1 cut(s) | 117 |
| MlsI | TGGCCA | 1 cut(s) | 291 |
| MluCI | AATT | 2 cut(s) | 285, 593 |
| MluNI | TGGCCA | 1 cut(s) | 291 |
| MlyI | GAGTC | 1 cut(s) | 361 |
| MnlI | CCTC | 5 cut(s) | 58, 85, 130, 247, 472 |
| Mox20I | TGGCCA | 1 cut(s) | 291 |
| MroXI | GAANNNNTTC | 1 cut(s) | 333 |
| MscI | TGGCCA | 1 cut(s) | 291 |
| MseI | TTAA | 1 cut(s) | 207 |
| Msp20I | TGGCCA | 1 cut(s) | 291 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 35 |
| NcoI | CCATGG | 1 cut(s) | 42 |
| NdeII | GATC | 1 cut(s) | 388 |
| NlaIII | CATG | 2 cut(s) | 46, 121 |
| NlaIV | GGNNCC | 1 cut(s) | 525 |
| NmeAIII | GCCGAG | 1 cut(s) | 160 |
| NmuCI | GTSAC | 2 cut(s) | 107, 185 |
| NspI | RCATGY | 1 cut(s) | 121 |
| PceI | AGGCCT | 1 cut(s) | 68 |
| PdmI | GAANNNNTTC | 1 cut(s) | 333 |
| PkrI | GCNGC | 5 cut(s) | 40, 133, 277, 379, 558 |
| PleI | GAGTC | 1 cut(s) | 360 |
| PpsI | GAGTC | 1 cut(s) | 360 |
| PshBI | ATTAAT | 1 cut(s) | 207 |
| PspN4I | GGNNCC | 1 cut(s) | 525 |
| PspPI | GGNCC | 2 cut(s) | 162, 523 |
| PstI | CTGCAG | 1 cut(s) | 423 |
| PstNI | CAGNNNCTG | 2 cut(s) | 418, 580 |
| PsuI | RGATCY | 1 cut(s) | 388 |
| RsaI | GTAC | 1 cut(s) | 501 |
| RsaNI | GTAC | 1 cut(s) | 500 |
| SaqAI | TTAA | 1 cut(s) | 207 |
| SatI | GCNGC | 5 cut(s) | 39, 132, 276, 378, 557 |
| Sau3AI | GATC | 1 cut(s) | 388 |
| Sau96I | GGNCC | 2 cut(s) | 162, 523 |
| SchI | GAGTC | 1 cut(s) | 361 |
| SduI | GDGCHC | 1 cut(s) | 117 |
| SetI | ASST | 9 cut(s) | 77, 96, 129, 334, 364, 370, 417, 460, 514 |
| SfaNI | GCATC | 4 cut(s) | 294, 453, 475, 574 |
| SfcI | CTRYAG | 1 cut(s) | 419 |
| SinI | GGWCC | 1 cut(s) | 523 |
| SmlI | CTYRAG | 1 cut(s) | 363 |
| SmoI | CTYRAG | 1 cut(s) | 363 |
| Sse9I | AATT | 2 cut(s) | 285, 593 |
| SseBI | AGGCCT | 1 cut(s) | 68 |
| SsiI | CCGC | 1 cut(s) | 217 |
| SspMI | CTAG | 1 cut(s) | 626 |
| StuI | AGGCCT | 1 cut(s) | 68 |
| StyI | CCWWGG | 2 cut(s) | 42, 466 |
| TaaI | ACNGT | 1 cut(s) | 547 |
| TaqII | GACCGA | 1 cut(s) | 173 |
| TasI | AATT | 2 cut(s) | 285, 593 |
| TatI | WGTACW | 1 cut(s) | 499 |
| Tru1I | TTAA | 1 cut(s) | 207 |
| Tru9I | TTAA | 1 cut(s) | 207 |
| TseFI | GTSAC | 2 cut(s) | 107, 185 |
| TseI | GCWGC | 5 cut(s) | 38, 131, 275, 377, 556 |
| Tsp45I | GTSAC | 2 cut(s) | 107, 185 |
| TspDTI | ATGAA | 3 cut(s) | 102, 164, 342 |
| VpaK11BI | GGWCC | 1 cut(s) | 523 |
| VspI | ATTAAT | 1 cut(s) | 207 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 62 |
| XbaI | TCTAGA | 1 cut(s) | 625 |
| XceI | RCATGY | 1 cut(s) | 121 |
| XmnI | GAANNNNTTC | 1 cut(s) | 333 |
| XspI | CTAG | 1 cut(s) | 626 |