Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007395

Physical Location & Seq

Genomic Coordinates Reverse (-)

20217409 .. 20224729

Gene Structure 7321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G203000.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 714 bp

ATGGCTTCGTCTTCCTCGACTCTGCTCCTTCCACTTGCTCATCATGTGTTAGGTTCATCTTCTGGAAAAAGGATATCTGCAAATTATCAAGGCATTTCCTGCGCAAAAGTTCAGGGTGTGCTTGTGAGATGTTCAAATTCAGAACTTACCGTTAAAGCTGCAAGATCAAGAGGATATATGGATCAGTTCTGTTTAACGAAACGAAGAGATATGATTGGGTTGCTTCTCGGAGTTTCAAGCCTTGTGACAGACTCATTTGAAGCTGAGGGAGCTGGCTTACCCCCAGAAGAAAAACCTAGGCTATGTGATGGTTCTTGTGAGAAAGAGCTTGAAAATATACCTATGGTAACTACAGAGTCCGGTTTGCAGTACAAGGATATTAAAGTTGGTCAAGGCCCCAGCCCACCAGTTGGTTTTCAGGTGGCGGCGAATTATGTTGCCATGGTTCCATCTGGACAAATATTTGACAGTTCCTTGGAGAAGGGTCAAGTTTATATATTTCGTGTTGGCTCTGGTCAGGTGATCAAGGGACTTGATGAAGGGATCTTATCCATGAAAATAGGAGGGAAGCGCCGACTCTACATCCCAGGATCGTTGGCATTTCCCAAGGGTCTCAATTCAGCTCCAGGAAGGCCAAGGGTGGCTCCAAGTAGTCCGGTCATTTTTGACGTGAGTTTAGAATACGTACCAGGCCTTGAAATTGAGGAAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009534 GO:0009536 GO:0009543 GO:0009570 GO:0009579 GO:0031976 GO:0031977 GO:0031978 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

238

Amino Acids

25.26

Weight (kDa)

7.59

Isoelectric Point (pI)

56.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007395)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43560 AT2G43560
fragaria_vesca	FvH4_4g10650 FvH4_4g10650 FvH4_4g10650
prunus_persica	Prupe.1G203000_v2.0.a1 Prupe.1G203000_v2.0.a1 Prupe.1G203000_v2.0.a1 Prupe.1G203000_v2.0.a1 Prupe.1G203000_v2.0.a1 Prupe.1G203000_v2.0.a1 Prupe.1G203000_v2.0.a1
pyrus_communis	pycom04g04130
rosa_chinensis	RchiOBHm_Chr4g0406301
rosa_laevigata	RLG00000008778
rosa_multiflora	Rmu_sc0007014.1_g000002
rosa_roxburghii	Rroxscaffold_5G00351040
rosa_rugosa	Rorug04G0067900 Rorug04G0067900
rosa_samantha	Rh4AG137100 Rh4BG134700 Rh4CG145300 Rh4DG132000
rosa_wichuraiana	Rw0G006870 Rw4G011130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	103
AccB7I	CCANNNNNTGG	1 cut(s)	410
AciI	CCGC	1 cut(s)	425
AclWI	GGATC	3 cut(s)	189, 551, 598
AcsI	RAATTY	1 cut(s)	136
AfaI	GTAC	2 cut(s)	371, 687
AfiI	CCNNNNNNNGG	1 cut(s)	410
AgsI	TTSAA	5 cut(s)	135, 237, 260, 332, 698
AjiI	CACGTC	1 cut(s)	670
AjnI	CCWGG	3 cut(s)	586, 625, 688
AluBI	AGCT	5 cut(s)	158, 263, 272, 328, 623
AluI	AGCT	5 cut(s)	158, 263, 272, 328, 623
Alw26I	GTCTC	1 cut(s)	617
AlwI	GGATC	3 cut(s)	189, 551, 598
AoxI	GGCC	3 cut(s)	394, 632, 691
ApeKI	GCWGC	1 cut(s)	158
ApoI	RAATTY	1 cut(s)	136
AspA2I	CCTAGG	1 cut(s)	296
AspLEI	GCGC	2 cut(s)	104, 573
AspS9I	GGNCC	1 cut(s)	395
AsuHPI	GGTGA	1 cut(s)	532
AvrII	CCTAGG	1 cut(s)	296
BbsI	GAAGAC	1 cut(s)	3
BbvCI	CCTCAGC	1 cut(s)	264
BbvI	GCAGC	1 cut(s)	145
BccI	CCATC	2 cut(s)	302, 457
BciT130I	CCWGG	3 cut(s)	588, 627, 690
BclI	TGATCA	1 cut(s)	522
BcoDI	GTCTC	1 cut(s)	617
BfaI	CTAG	1 cut(s)	297
BfmI	CTRYAG	1 cut(s)	351
BfoI	RGCGCY	1 cut(s)	574
BisI	GCNGC	2 cut(s)	159, 426
BlnI	CCTAGG	1 cut(s)	296
BlsI	GCNGC	2 cut(s)	160, 427
Bme1390I	CCNGG	3 cut(s)	588, 627, 690
BmgBI	CACGTC	1 cut(s)	670
BmgT120I	GGNCC	1 cut(s)	395
BmiI	GGNNCC	3 cut(s)	397, 447, 645
BmrFI	CCNGG	3 cut(s)	588, 627, 690
BpiI	GAAGAC	1 cut(s)	3
BpmI	CTGGAG	1 cut(s)	609
Bpu10I	CCTNAGC	1 cut(s)	264
BsaAI	YACGTR	1 cut(s)	685
BsaI	GGTCTC	1 cut(s)	617
BsaJI	CCNNGG	6 cut(s)	296, 441, 474, 586, 606, 635
BsaWI	WCCGGW	2 cut(s)	359, 655
Bsc4I	CCNNNNNNNGG	1 cut(s)	410
Bse1I	ACTGG	1 cut(s)	407
BseBI	CCWGG	3 cut(s)	588, 627, 690
BseDI	CCNNGG	6 cut(s)	296, 441, 474, 586, 606, 635
BseGI	GGATG	1 cut(s)	582
BseLI	CCNNNNNNNGG	1 cut(s)	410
BseMII	CTCAG	1 cut(s)	255
BseNI	ACTGG	1 cut(s)	407
BseXI	GCAGC	1 cut(s)	145
BseYI	CCCAGC	1 cut(s)	398
BshFI	GGCC	3 cut(s)	396, 634, 693
BsiSI	CCGG	2 cut(s)	360, 656
BslFI	GGGAC	1 cut(s)	543
BslI	CCNNNNNNNGG	1 cut(s)	410
BsmAI	GTCTC	1 cut(s)	617
BsmFI	GGGAC	1 cut(s)	543
BsnI	GGCC	3 cut(s)	396, 634, 693
Bso31I	GGTCTC	1 cut(s)	617
Bsp143I	GATC	5 cut(s)	164, 181, 522, 543, 590
Bsp19I	CCATGG	1 cut(s)	441
BspACI	CCGC	1 cut(s)	425
BspANI	GGCC	3 cut(s)	396, 634, 693
BspCNI	CTCAG	1 cut(s)	256
BspLI	GGNNCC	3 cut(s)	397, 447, 645
BspPI	GGATC	3 cut(s)	189, 551, 598
BspTNI	GGTCTC	1 cut(s)	617
BsrI	ACTGG	1 cut(s)	407
BssECI	CCNNGG	6 cut(s)	296, 441, 474, 586, 606, 635
BssMI	GATC	5 cut(s)	164, 181, 522, 543, 590
BssT1I	CCWWGG	5 cut(s)	296, 441, 474, 606, 635
Bst2UI	CCWGG	3 cut(s)	588, 627, 690
Bst4CI	ACNGT	2 cut(s)	151, 470
Bst6I	CTCTTC	2 cut(s)	199, 702
BstAPI	GCANNNNNTGC	1 cut(s)	99
BstBAI	YACGTR	1 cut(s)	685
BstC8I	GCNNGC	1 cut(s)	274
BstDEI	CTNAG	1 cut(s)	264
BstDSI	CCRYGG	1 cut(s)	441
BstF5I	GGATG	1 cut(s)	582
BstH2I	RGCGCY	1 cut(s)	574
BstHHI	GCGC	2 cut(s)	104, 573
BstKTI	GATC	5 cut(s)	167, 184, 525, 546, 593
BstMAI	GTCTC	1 cut(s)	617
BstMBI	GATC	5 cut(s)	164, 181, 522, 543, 590
BstMWI	GCNNNNNNNGC	2 cut(s)	99, 269
BstNI	CCWGG	3 cut(s)	588, 627, 690
BstSCI	CCNGG	3 cut(s)	586, 625, 688
BstSFI	CTRYAG	1 cut(s)	351
BstSNI	TACGTA	1 cut(s)	685
BstV1I	GCAGC	1 cut(s)	145
BstV2I	GAAGAC	1 cut(s)	3
BstX2I	RGATCY	1 cut(s)	543
BstYI	RGATCY	1 cut(s)	543
BsuRI	GGCC	3 cut(s)	396, 634, 693
BtgI	CCRYGG	1 cut(s)	441
BtrI	CACGTC	1 cut(s)	670
BtsCI	GGATG	1 cut(s)	582
Cac8I	GCNNGC	1 cut(s)	274
CfoI	GCGC	2 cut(s)	104, 573
Cfr13I	GGNCC	1 cut(s)	395
Csp6I	GTAC	2 cut(s)	370, 686
CviAII	CATG	3 cut(s)	44, 442, 553
CviQI	GTAC	2 cut(s)	370, 686
DdeI	CTNAG	1 cut(s)	264
DpnI	GATC	5 cut(s)	166, 183, 524, 545, 592
DpnII	GATC	5 cut(s)	164, 181, 522, 543, 590
Eam1104I	CTCTTC	2 cut(s)	199, 702
EarI	CTCTTC	2 cut(s)	199, 702
Eco105I	TACGTA	1 cut(s)	685
Eco130I	CCWWGG	5 cut(s)	296, 441, 474, 606, 635
Eco147I	AGGCCT	1 cut(s)	693
Eco31I	GGTCTC	1 cut(s)	617
Eco32I	GATATC	1 cut(s)	75
EcoO109I	RGGNCCY	1 cut(s)	395
EcoRII	CCWGG	3 cut(s)	586, 625, 688
EcoRV	GATATC	1 cut(s)	75
EcoT14I	CCWWGG	5 cut(s)	296, 441, 474, 606, 635
ErhI	CCWWGG	5 cut(s)	296, 441, 474, 606, 635
FaeI	CATG	3 cut(s)	47, 445, 556
FaqI	GGGAC	1 cut(s)	543
FatI	CATG	3 cut(s)	43, 441, 552
FbaI	TGATCA	1 cut(s)	522
Fnu4HI	GCNGC	2 cut(s)	159, 426
FokI	GGATG	1 cut(s)	569
Fsp4HI	GCNGC	2 cut(s)	159, 426
FspBI	CTAG	1 cut(s)	297
FspI	TGCGCA	1 cut(s)	103
GlaI	GCGC	2 cut(s)	103, 572
GluI	GCNGC	2 cut(s)	159, 426
GsaI	CCCAGC	1 cut(s)	402
GsuI	CTGGAG	1 cut(s)	609
HaeII	RGCGCY	1 cut(s)	574
HaeIII	GGCC	3 cut(s)	396, 634, 693
HapII	CCGG	2 cut(s)	360, 656
HhaI	GCGC	2 cut(s)	104, 573
Hin1II	CATG	3 cut(s)	47, 445, 556
Hin6I	GCGC	2 cut(s)	102, 571
HinP1I	GCGC	2 cut(s)	102, 571
HinfI	GANTC	4 cut(s)	19, 251, 356, 576
HpaII	CCGG	2 cut(s)	360, 656
HphI	GGTGA	1 cut(s)	532
Hpy188I	TCNGA	2 cut(s)	142, 230
Hpy188III	TCNNGA	3 cut(s)	63, 168, 453
HpyAV	CCTTC	4 cut(s)	38, 475, 533, 624
HpyCH4III	ACNGT	2 cut(s)	151, 470
HpyCH4IV	ACGT	2 cut(s)	669, 684
HpyCH4V	TGCA	3 cut(s)	80, 161, 367
HpyF10VI	GCNNNNNNNGC	2 cut(s)	99, 269
HpyF3I	CTNAG	1 cut(s)	264
HpySE526I	ACGT	2 cut(s)	669, 684
Hsp92II	CATG	3 cut(s)	47, 445, 556
HspAI	GCGC	2 cut(s)	102, 571
Ksp22I	TGATCA	1 cut(s)	522
Kzo9I	GATC	5 cut(s)	164, 181, 522, 543, 590
LmnI	GCTCC	4 cut(s)	30, 269, 628, 649
Lsp1109I	GCAGC	1 cut(s)	145
MaeI	CTAG	1 cut(s)	297
MaeII	ACGT	2 cut(s)	669, 684
MaeIII	GTNAC	2 cut(s)	244, 346
MalI	GATC	5 cut(s)	166, 183, 524, 545, 592
MboI	GATC	5 cut(s)	164, 181, 522, 543, 590
MboII	GAAGA	4 cut(s)	3, 51, 216, 299
MflI	RGATCY	1 cut(s)	543
MluCI	AATT	5 cut(s)	82, 136, 430, 616, 699
MlyI	GAGTC	4 cut(s)	13, 245, 365, 570
MnlI	CCTC	5 cut(s)	25, 164, 259, 557, 697
MseI	TTAA	3 cut(s)	153, 194, 381
MspI	CCGG	2 cut(s)	360, 656
MspR9I	CCNGG	3 cut(s)	588, 627, 690
MvaI	CCWGG	3 cut(s)	588, 627, 690
MwoI	GCNNNNNNNGC	2 cut(s)	99, 269
NcoI	CCATGG	1 cut(s)	441
NdeII	GATC	5 cut(s)	164, 181, 522, 543, 590
NlaIII	CATG	3 cut(s)	47, 445, 556
NlaIV	GGNNCC	3 cut(s)	397, 447, 645
NmuCI	GTSAC	1 cut(s)	244
NsbI	TGCGCA	1 cut(s)	103
PceI	AGGCCT	1 cut(s)	693
PcsI	WCGNNNNNNNCGW	1 cut(s)	14
PflMI	CCANNNNNTGG	1 cut(s)	410
PfoI	TCCNGGA	1 cut(s)	625
PkrI	GCNGC	2 cut(s)	160, 427
PleI	GAGTC	4 cut(s)	13, 245, 364, 570
PpsI	GAGTC	4 cut(s)	13, 245, 364, 570
Ppu21I	YACGTR	1 cut(s)	685
Psp6I	CCWGG	3 cut(s)	586, 625, 688
PspFI	CCCAGC	1 cut(s)	398
PspGI	CCWGG	3 cut(s)	586, 625, 688
PspN4I	GGNNCC	3 cut(s)	397, 447, 645
PspPI	GGNCC	1 cut(s)	395
PsuI	RGATCY	1 cut(s)	543
RsaI	GTAC	2 cut(s)	371, 687
RsaNI	GTAC	2 cut(s)	370, 686
SaqAI	TTAA	3 cut(s)	153, 194, 381
SatI	GCNGC	2 cut(s)	159, 426
Sau3AI	GATC	5 cut(s)	164, 181, 522, 543, 590
Sau96I	GGNCC	1 cut(s)	395
SchI	GAGTC	4 cut(s)	13, 245, 365, 570
ScrFI	CCNGG	3 cut(s)	588, 627, 690
SfcI	CTRYAG	1 cut(s)	351
SnaBI	TACGTA	1 cut(s)	685
Sse9I	AATT	5 cut(s)	82, 136, 430, 616, 699
SseBI	AGGCCT	1 cut(s)	693
SsiI	CCGC	1 cut(s)	425
SspI	AATATT	1 cut(s)	462
SspMI	CTAG	1 cut(s)	297
StuI	AGGCCT	1 cut(s)	693
StyD4I	CCNGG	3 cut(s)	586, 625, 688
StyI	CCWWGG	5 cut(s)	296, 441, 474, 606, 635
TaaI	ACNGT	2 cut(s)	151, 470
TaiI	ACGT	2 cut(s)	672, 687
TaqI	TCGA	1 cut(s)	17
TasI	AATT	5 cut(s)	82, 136, 430, 616, 699
TatI	WGTACW	1 cut(s)	369
TauI	GCSGC	1 cut(s)	428
Tru1I	TTAA	3 cut(s)	153, 194, 381
Tru9I	TTAA	3 cut(s)	153, 194, 381
TseFI	GTSAC	1 cut(s)	244
TseI	GCWGC	1 cut(s)	158
Tsp45I	GTSAC	1 cut(s)	244
TspDTI	ATGAA	3 cut(s)	45, 552, 569
Van91I	CCANNNNNTGG	1 cut(s)	410
XapI	RAATTY	1 cut(s)	136
XmaJI	CCTAGG	1 cut(s)	296
XspI	CTAG	1 cut(s)	297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.